Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8004L11.3 |
| Conread position: | 207-526 |
| Cow position: | chr1:6428295-6428609 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-209 |
| Cow position: | chr10:50087433-50087641 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-612 |
| Cow position: | chr10:58436732-58436120 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 609 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 515, 0 |
| Conread position: | 442-583 |
| Cow position: | chr10:50087707-50087838 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-111 |
| Cow position: | chr11:74548219-74548329 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 110 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 111-185 |
| Cow position: | chr11:74548867-74548941 (view UCSC Genome Browser custom track) |
| Alignm length: | 75 |
| Alignm identity: | 74 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-284 |
| Cow position: | chr11:74550426-74550525 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 282-371 |
| Cow position: | chr11:74550834-74550923 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-454 |
| Cow position: | chr11:74551494-74551581 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 453-566 |
| Cow position: | chr11:74551919-74552032 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 114 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-612 |
| Cow position: | chr13:55456215-55456811 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 53 |
| Conread position: | 7-283 |
| Cow position: | chr13:43715201-43715462 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 317-501 |
| Cow position: | chr13:43715465-43715648 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 150 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 6-581 |
| Cow position: | chr16:29457274-29457821 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 521, 79 |
| Conread position: | 1-577 |
| Cow position: | chr18:23496143-23496706 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 85 |
| Conread position: | 93-598 |
| Cow position: | chr18:21687861-21687362 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 1-612 |
| Cow position: | chr19:32618105-32618695 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 1-85 |
| Cow position: | chr2:60901008-60901092 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 79 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-612 |
| Cow position: | chr20:9316163-9316778 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 601 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 368, 0 |
| Conread position: | 1-612 |
| Cow position: | chr21:49610500-49611107 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 427, 32 |
| Conread position: | 88-610 |
| Cow position: | chr24:30807227-30807749 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-560 |
| Cow position: | chr25:33287930-33287383 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 111 |
| Conread position: | 330-612 |
| Cow position: | chr25:731462-731180 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-612 |
| Cow position: | chr27:23776892-23776271 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 56 |
| Conread position: | 154-612 |
| Cow position: | chr28:20978125-20978567 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 70 |
| Conread position: | 1-232 |
| Cow position: | chr3:24917938-24917704 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 64, 27 |
| Conread position: | 7-612 |
| Cow position: | chr3:40136-39546 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 431, 324 |
| Conread position: | 7-612 |
| Cow position: | chr3:44880514-44879911 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 530, 65 |
| Conread position: | 1-612 |
| Cow position: | chr7:5733645-5733042 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 384, 0 |
| Conread position: | 15-581 |
| Cow position: | chr8:22039089-22039600 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 448, 69 |