Cow genome map

Conread name: Ss1.1-Pig3-SRG8010N20.5

Conread position: 41-290
Cow position: chr1:57781656-57781408 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 236, 87

Conread position: 54-290
Cow position: chr1:28326452-28326687 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 223, 76

Conread position: 510-630
Cow position: chr1:45535722-45535603 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 510-636
Cow position: chr1:50679266-50679391 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 8

Conread position: 510-636
Cow position: chr1:54258582-54258456 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 41, 85

Conread position: 510-636
Cow position: chr1:68763669-68763791 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 511-636
Cow position: chr1:52052703-52052829 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 513-636
Cow position: chr1:45673728-45673601 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 514-626
Cow position: chr1:65103632-65103521 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 514-630
Cow position: chr1:43352643-43352761 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 514-630
Cow position: chr1:68826893-68827007 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 514-631
Cow position: chr1:26702192-26702310 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 514-632
Cow position: chr1:43447817-43447936 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 514-632
Cow position: chr1:81228323-81228442 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 78

Conread position: 514-632
Cow position: chr1:81471144-81471028 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 514-635
Cow position: chr1:5872956-5873078 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 56

Conread position: 514-636
Cow position: chr1:4032643-4032520 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 514-636
Cow position: chr1:4374326-4374449 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 60

Conread position: 514-636
Cow position: chr1:5409604-5409722 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chr1:22394814-22394687 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 514-636
Cow position: chr1:22448570-22448695 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 514-636
Cow position: chr1:25387066-25386945 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 514-636
Cow position: chr1:31348426-31348548 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 37, 54

Conread position: 514-636
Cow position: chr1:41181856-41181737 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 514-636
Cow position: chr1:51684818-51684693 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 514-636
Cow position: chr1:53374444-53374323 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 514-636
Cow position: chr1:54199368-54199490 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr1:63434795-63434914 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chr1:71119532-71119410 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 102

Conread position: 514-636
Cow position: chr1:73561636-73561755 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 514-636
Cow position: chr1:74927895-74927776 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 514-636
Cow position: chr1:76470666-76470547 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr1:81472882-81472765 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 514-636
Cow position: chr1:85596955-85596833 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr1:93528710-93528590 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 29

Conread position: 515-629
Cow position: chr1:46030970-46030858 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 515-636
Cow position: chr1:666376-666257 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 515-636
Cow position: chr1:42398181-42398302 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr1:63390757-63390879 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 515-636
Cow position: chr1:92996881-92997004 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 64

Conread position: 516-628
Cow position: chr1:74956008-74956121 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 516-629
Cow position: chr1:68618923-68619034 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 516-632
Cow position: chr1:24445618-24445732 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 516-632
Cow position: chr1:64572524-64572409 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 516-632
Cow position: chr1:81355696-81355812 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 106

Conread position: 516-634
Cow position: chr1:68951636-68951521 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 516-636
Cow position: chr1:20544307-20544186 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 516-636
Cow position: chr1:90868432-90868549 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 519-636
Cow position: chr1:82443448-82443564 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 520-627
Cow position: chr1:72105417-72105312 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-630
Cow position: chr1:43703414-43703305 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 520-632
Cow position: chr1:87072704-87072593 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 68

Conread position: 520-635
Cow position: chr1:84239104-84239220 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 520-636
Cow position: chr1:3607818-3607702 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr1:4291171-4291052 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 520-636
Cow position: chr1:32001308-32001429 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr1:34771498-34771612 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 520-636
Cow position: chr1:45288866-45288980 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr1:52956262-52956144 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 29

Conread position: 520-636
Cow position: chr1:61284060-61283943 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 520-636
Cow position: chr1:69694987-69695100 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 520-636
Cow position: chr1:79165077-79165194 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 520-636
Cow position: chr1:85550073-85550186 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr1:98311075-98310959 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 114, 37

Conread position: 521-636
Cow position: chr1:47886479-47886594 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 522-631
Cow position: chr1:68845481-68845586 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 19

Conread position: 522-636
Cow position: chr1:33811933-33811821 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 529-636
Cow position: chr1:73536738-73536630 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 534-636
Cow position: chr1:51654404-51654303 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 539-636
Cow position: chr1:65909516-65909419 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 9

Conread position: 545-636
Cow position: chr1:90595569-90595661 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 548-636
Cow position: chr1:6304883-6304971 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 48-290
Cow position: chr10:4661037-4661278 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 173, 80

Conread position: 509-630
Cow position: chr10:29090705-29090824 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 510-629
Cow position: chr10:35778915-35779033 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 510-631
Cow position: chr10:32029847-32029966 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 510-636
Cow position: chr10:12486250-12486125 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 66

Conread position: 513-635
Cow position: chr10:21462229-21462101 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 514-627
Cow position: chr10:1976332-1976446 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 514-627
Cow position: chr10:31005034-31005148 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 77

Conread position: 514-630
Cow position: chr10:42123612-42123726 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 514-632
Cow position: chr10:2202140-2202258 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 514-632
Cow position: chr10:6664015-6663892 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 514-636
Cow position: chr10:9798212-9798336 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 514-636
Cow position: chr10:15318866-15318745 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr10:16986313-16986191 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 120, 67

Conread position: 514-636
Cow position: chr10:17983165-17983047 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 514-636
Cow position: chr10:19104190-19104308 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr10:20372143-20372264 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr10:20505527-20505401 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 514-636
Cow position: chr10:36002181-36002060 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 63

Conread position: 514-636
Cow position: chr10:37442289-37442167 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 36

Conread position: 514-636
Cow position: chr10:37444236-37444358 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 36

Conread position: 514-636
Cow position: chr10:37528623-37528743 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 514-636
Cow position: chr10:39140164-39140041 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 84

Conread position: 514-636
Cow position: chr10:43508972-43508853 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr10:45379023-45379142 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr10:50200693-50200576 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 514-636
Cow position: chr10:56475447-56475328 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 514-636
Cow position: chr10:66194321-66194442 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 515-619
Cow position: chr10:15868232-15868128 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 515-631
Cow position: chr10:16645206-16645322 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 515-634
Cow position: chr10:25913813-25913931 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 50

Conread position: 515-636
Cow position: chr10:2462505-2462622 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 515-636
Cow position: chr10:24561007-24561125 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 515-636
Cow position: chr10:34607542-34607421 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 43

Conread position: 515-636
Cow position: chr10:52029606-52029485 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 51

Conread position: 515-636
Cow position: chr10:63276374-63276254 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 516-628
Cow position: chr10:15462471-15462359 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 516-632
Cow position: chr10:10720693-10720807 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 516-632
Cow position: chr10:28152399-28152514 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 516-632
Cow position: chr10:48462360-48462472 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 516-632
Cow position: chr10:62286536-62286418 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 516-636
Cow position: chr10:11463685-11463804 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 516-636
Cow position: chr10:19402918-19402797 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 516-636
Cow position: chr10:60032590-60032711 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 516-636
Cow position: chr10:64876499-64876380 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 42

Conread position: 517-636
Cow position: chr10:24548237-24548118 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 519-635
Cow position: chr10:52881642-52881757 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 519-636
Cow position: chr10:58251862-58251978 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 103, 0

Conread position: 520-631
Cow position: chr10:33732891-33733001 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 520-631
Cow position: chr10:48388295-48388405 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 520-632
Cow position: chr10:23576522-23576409 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 520-632
Cow position: chr10:39303872-39303985 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 520-632
Cow position: chr10:46493019-46493132 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 520-635
Cow position: chr10:5607620-5607506 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 520-636
Cow position: chr10:331356-331239 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 520-636
Cow position: chr10:721279-721163 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 87

Conread position: 520-636
Cow position: chr10:3998881-3998765 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 38

Conread position: 520-636
Cow position: chr10:10468957-10468843 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 29

Conread position: 520-636
Cow position: chr10:12315132-12315018 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr10:14975819-14975934 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 520-636
Cow position: chr10:19372361-19372476 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 520-636
Cow position: chr10:19895374-19895258 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 32

Conread position: 520-636
Cow position: chr10:31779293-31779409 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr10:35653646-35653532 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr10:37709056-37709173 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 21

Conread position: 520-636
Cow position: chr10:41254595-41254708 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 520-636
Cow position: chr10:43438851-43438736 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 520-636
Cow position: chr10:52113693-52113809 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr10:59663998-59664116 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 521-636
Cow position: chr10:533506-533390 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 28

Conread position: 521-636
Cow position: chr10:4164244-4164129 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 524-632
Cow position: chr10:47412132-47412239 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 528-631
Cow position: chr10:6986415-6986312 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 550-636
Cow position: chr10:48377693-48377779 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 553-636
Cow position: chr10:4484612-4484529 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 74
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 48-275
Cow position: chr11:9716849-9717072 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 80, 0

Conread position: 48-290
Cow position: chr11:14655754-14655995 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 173, 87

Conread position: 510-636
Cow position: chr11:32254227-32254349 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 513-630
Cow position: chr11:34032213-34032328 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 513-636
Cow position: chr11:83000543-83000667 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 37

Conread position: 514-632
Cow position: chr11:63516815-63516698 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 514-635
Cow position: chr11:2084131-2084010 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 514-635
Cow position: chr11:77241358-77241239 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr11:5211741-5211871 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr11:8545027-8545144 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 514-636
Cow position: chr11:13500005-13499884 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 514-636
Cow position: chr11:26144108-26144228 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 514-636
Cow position: chr11:27386351-27386475 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chr11:36672056-36672174 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr11:38874414-38874535 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr11:39118743-39118620 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 514-636
Cow position: chr11:40478865-40478982 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 514-636
Cow position: chr11:65857848-65857726 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 51

Conread position: 514-636
Cow position: chr11:68909858-68909982 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 78

Conread position: 514-636
Cow position: chr11:70756470-70756349 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 515-630
Cow position: chr11:81168040-81168158 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 515-636
Cow position: chr11:3726275-3726156 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 515-636
Cow position: chr11:4732329-4732210 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 515-636
Cow position: chr11:20684585-20684706 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 43

Conread position: 515-636
Cow position: chr11:37804567-37804686 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 516-629
Cow position: chr11:30830628-30830741 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 516-629
Cow position: chr11:41293832-41293944 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 37

Conread position: 516-629
Cow position: chr11:80537474-80537361 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 97

Conread position: 516-630
Cow position: chr11:30954986-30954873 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 42

Conread position: 516-632
Cow position: chr11:11125649-11125534 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 516-632
Cow position: chr11:49057389-49057274 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 516-632
Cow position: chr11:51729272-51729160 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 516-634
Cow position: chr11:83066483-83066364 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 516-635
Cow position: chr11:377656-377775 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 516-635
Cow position: chr11:36658833-36658952 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 516-636
Cow position: chr11:10837540-10837661 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 516-636
Cow position: chr11:23138068-23138192 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 60

Conread position: 516-636
Cow position: chr11:33364329-33364213 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 516-636
Cow position: chr11:43360791-43360916 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 516-636
Cow position: chr11:43430468-43430585 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 82

Conread position: 516-636
Cow position: chr11:71492874-71492987 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 516-636
Cow position: chr11:85703688-85703574 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 520-627
Cow position: chr11:18341058-18341164 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 520-628
Cow position: chr11:77705740-77705631 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 520-630
Cow position: chr11:23232534-23232642 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 33

Conread position: 520-630
Cow position: chr11:33345427-33345317 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 520-631
Cow position: chr11:65607710-65607818 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 520-632
Cow position: chr11:52690538-52690650 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 520-635
Cow position: chr11:48697430-48697318 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 520-635
Cow position: chr11:62808670-62808780 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 520-636
Cow position: chr11:9837116-9837232 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 23, 30

Conread position: 520-636
Cow position: chr11:10076750-10076634 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 106, 32

Conread position: 520-636
Cow position: chr11:16907067-16907176 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 520-636
Cow position: chr11:36301096-36301207 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 520-636
Cow position: chr11:41175967-41176082 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr11:43914197-43914081 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr11:48042053-48042168 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 520-636
Cow position: chr11:49934749-49934869 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 520-636
Cow position: chr11:51626946-51626832 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 520-636
Cow position: chr11:62979472-62979356 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 24, 38

Conread position: 520-636
Cow position: chr11:63435503-63435385 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 520-636
Cow position: chr11:67600766-67600650 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 34

Conread position: 521-632
Cow position: chr11:17493459-17493350 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 521-635
Cow position: chr11:83196479-83196367 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 521-636
Cow position: chr11:15772731-15772847 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 524-635
Cow position: chr11:34113242-34113132 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 544-636
Cow position: chr11:33348224-33348316 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 544-636
Cow position: chr11:48932625-48932717 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 545-636
Cow position: chr11:28993772-28993864 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 551-636
Cow position: chr11:18509064-18509150 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 554-636
Cow position: chr11:62155577-62155494 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 77
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 514-631
Cow position: chr12:23916813-23916695 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 514-635
Cow position: chr12:4182724-4182842 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 514-635
Cow position: chr12:4719914-4719794 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 54

Conread position: 514-636
Cow position: chr12:4596429-4596312 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chr12:10491239-10491121 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 514-636
Cow position: chr12:15938296-15938419 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr12:24440782-24440666 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr12:28650924-28650802 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 44

Conread position: 514-636
Cow position: chr12:40910322-40910442 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 515-635
Cow position: chr12:12637217-12637337 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr12:17666269-17666147 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 515-636
Cow position: chr12:22125014-22124894 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 50

Conread position: 515-636
Cow position: chr12:27563411-27563530 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 516-631
Cow position: chr12:5714595-5714480 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 516-632
Cow position: chr12:20354941-20354821 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 63

Conread position: 516-632
Cow position: chr12:28582539-28582653 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 516-632
Cow position: chr12:30805818-30805705 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 516-635
Cow position: chr12:18766008-18766130 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 516-636
Cow position: chr12:6121328-6121206 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 516-636
Cow position: chr12:18937371-18937248 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 516-636
Cow position: chr12:30476447-30476328 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 118, 37

Conread position: 516-636
Cow position: chr12:42174382-42174267 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 516-636
Cow position: chr12:46120869-46120983 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 519-636
Cow position: chr12:38184556-38184444 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 520-631
Cow position: chr12:19258241-19258131 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 520-636
Cow position: chr12:8868914-8869030 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr12:23855800-23855684 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr12:34007266-34007154 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 520-636
Cow position: chr12:38511875-38511991 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr12:42254629-42254514 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 520-636
Cow position: chr12:42966961-42966845 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 32

Conread position: 521-632
Cow position: chr12:17881821-17881713 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 93, 28

Conread position: 521-636
Cow position: chr12:3039471-3039353 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 521-636
Cow position: chr12:28748902-28748787 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 42

Conread position: 522-632
Cow position: chr12:7000644-7000753 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 522-636
Cow position: chr12:15050657-15050770 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 544-632
Cow position: chr12:20326713-20326625 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 76
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 508-629
Cow position: chr13:32826484-32826363 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 510-632
Cow position: chr13:46329630-46329508 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 512-631
Cow position: chr13:6153806-6153688 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 513-636
Cow position: chr13:52749495-52749379 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 514-626
Cow position: chr13:15964293-15964408 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 514-630
Cow position: chr13:13809583-13809467 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 34

Conread position: 514-631
Cow position: chr13:4420322-4420439 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 514-632
Cow position: chr13:20650006-20649888 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 514-632
Cow position: chr13:36771444-36771324 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 514-635
Cow position: chr13:10924941-10924814 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 514-635
Cow position: chr13:20562973-20563094 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr13:322805-322684 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 514-636
Cow position: chr13:6974141-6974260 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr13:8652462-8652339 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr13:12546928-12546811 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 514-636
Cow position: chr13:16711607-16711726 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 514-636
Cow position: chr13:18929505-18929627 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 64

Conread position: 514-636
Cow position: chr13:18941856-18941978 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr13:20041990-20041868 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 31, 72

Conread position: 514-636
Cow position: chr13:30026089-30026212 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 514-636
Cow position: chr13:37592966-37592843 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 514-636
Cow position: chr13:61162623-61162745 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr13:61990355-61990237 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 515-627
Cow position: chr13:37603373-37603262 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 35

Conread position: 515-632
Cow position: chr13:13954412-13954295 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 43

Conread position: 515-636
Cow position: chr13:14771433-14771555 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 49

Conread position: 515-636
Cow position: chr13:17855353-17855472 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 515-636
Cow position: chr13:25579209-25579089 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 43

Conread position: 516-631
Cow position: chr13:43762150-43762264 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 516-632
Cow position: chr13:13176632-13176747 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 516-636
Cow position: chr13:14967236-14967118 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 516-636
Cow position: chr13:17613323-17613443 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 48

Conread position: 519-630
Cow position: chr13:57002711-57002821 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 519-632
Cow position: chr13:19178257-19178370 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-632
Cow position: chr13:5758356-5758245 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 520-632
Cow position: chr13:54237339-54237450 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 520-636
Cow position: chr13:1042983-1042866 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 520-636
Cow position: chr13:15621795-15621914 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 520-636
Cow position: chr13:15869109-15869222 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 520-636
Cow position: chr13:15991245-15991131 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr13:25531806-25531688 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 520-636
Cow position: chr13:45725881-45725995 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 521-632
Cow position: chr13:13265793-13265903 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 521-636
Cow position: chr13:15192901-15192790 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 521-636
Cow position: chr13:16024576-16024690 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 522-636
Cow position: chr13:55947761-55947872 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 524-636
Cow position: chr13:563153-563043 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 524-636
Cow position: chr13:5091680-5091566 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 48-290
Cow position: chr14:14638679-14638919 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 173, 82

Conread position: 512-629
Cow position: chr14:20640595-20640477 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 512-636
Cow position: chr14:27591922-27591797 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 55

Conread position: 514-627
Cow position: chr14:41127934-41128042 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 514-630
Cow position: chr14:33341791-33341907 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 514-632
Cow position: chr14:16033042-16033161 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 26

Conread position: 514-632
Cow position: chr14:20712655-20712537 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 514-632
Cow position: chr14:27312460-27312577 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 104

Conread position: 514-636
Cow position: chr14:13006539-13006662 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 514-636
Cow position: chr14:22941691-22941565 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 514-636
Cow position: chr14:24991859-24991979 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr14:36289764-36289644 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 514-636
Cow position: chr14:37435266-37435143 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 92

Conread position: 514-636
Cow position: chr14:39422556-39422436 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr14:40347124-40347004 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 514-636
Cow position: chr14:46973472-46973593 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 515-632
Cow position: chr14:20016669-20016552 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 51

Conread position: 515-632
Cow position: chr14:26490704-26490590 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 515-636
Cow position: chr14:5222253-5222132 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 53

Conread position: 515-636
Cow position: chr14:12324457-12324579 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 49

Conread position: 515-636
Cow position: chr14:14949175-14949056 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 515-636
Cow position: chr14:26191066-26190946 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 515-636
Cow position: chr14:35420726-35420605 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 119, 50

Conread position: 515-636
Cow position: chr14:35498467-35498345 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 43

Conread position: 515-636
Cow position: chr14:48492753-48492633 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 516-631
Cow position: chr14:40165463-40165575 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 516-632
Cow position: chr14:28115148-28115033 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 516-636
Cow position: chr14:14187369-14187489 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 520-626
Cow position: chr14:19513370-19513265 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 520-628
Cow position: chr14:42437066-42437174 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 520-631
Cow position: chr14:40754204-40754092 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 520-636
Cow position: chr14:6419259-6419147 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 520-636
Cow position: chr14:13809977-13810094 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 520-636
Cow position: chr14:19129549-19129666 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 103
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 520-636
Cow position: chr14:19863390-19863280 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr14:24236868-24236980 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 520-636
Cow position: chr14:24981498-24981611 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 520-636
Cow position: chr14:33828205-33828317 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 520-636
Cow position: chr14:35503405-35503521 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 33

Conread position: 520-636
Cow position: chr14:37467719-37467605 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr14:45605131-45605248 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 520-636
Cow position: chr14:49021857-49021746 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 521-630
Cow position: chr14:48412838-48412729 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 25, 37

Conread position: 521-636
Cow position: chr14:4203054-4202937 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 521-636
Cow position: chr14:9020069-9020184 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 42

Conread position: 521-636
Cow position: chr14:20600431-20600542 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 521-636
Cow position: chr14:21284666-21284780 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 521-636
Cow position: chr14:32553268-32553153 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 32

Conread position: 523-631
Cow position: chr14:7036311-7036203 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 540-636
Cow position: chr14:35021956-35022053 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 543-636
Cow position: chr14:41756323-41756416 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 549-636
Cow position: chr14:33830366-33830453 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 510-631
Cow position: chr15:11363098-11362979 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 37

Conread position: 510-636
Cow position: chr15:36773616-36773495 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 9

Conread position: 514-628
Cow position: chr15:20422698-20422584 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 35

Conread position: 514-629
Cow position: chr15:38837831-38837942 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 514-632
Cow position: chr15:10845803-10845919 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 514-632
Cow position: chr15:11559271-11559156 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 514-632
Cow position: chr15:23927390-23927272 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 78

Conread position: 514-632
Cow position: chr15:27900427-27900310 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 514-633
Cow position: chr15:13846511-13846391 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 97

Conread position: 514-636
Cow position: chr15:7308073-7307952 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 39

Conread position: 514-636
Cow position: chr15:10512188-10512067 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 86

Conread position: 514-636
Cow position: chr15:10608222-10608102 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 514-636
Cow position: chr15:17100626-17100507 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr15:19771216-19771335 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr15:20459222-20459101 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 36

Conread position: 514-636
Cow position: chr15:21421021-21421142 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 514-636
Cow position: chr15:26573463-26573581 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr15:35112798-35112678 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 515-632
Cow position: chr15:14740600-14740484 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 41

Conread position: 515-636
Cow position: chr15:9107119-9107239 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 515-636
Cow position: chr15:16448768-16448889 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr15:21893863-21893986 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 49

Conread position: 515-636
Cow position: chr15:31857676-31857792 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 515-636
Cow position: chr15:43914006-43913887 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 516-631
Cow position: chr15:12655830-12655716 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 23

Conread position: 516-632
Cow position: chr15:1330017-1329903 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 516-632
Cow position: chr15:9871331-9871214 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 516-632
Cow position: chr15:18671370-18671253 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 516-632
Cow position: chr15:40009568-40009451 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 516-635
Cow position: chr15:23779985-23779869 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 516-636
Cow position: chr15:4534991-4535114 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 519-636
Cow position: chr15:28258369-28258252 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 30

Conread position: 520-632
Cow position: chr15:11995937-11995827 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 520-632
Cow position: chr15:36621499-36621612 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 520-635
Cow position: chr15:21522876-21522989 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr15:4295853-4295968 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 37

Conread position: 520-636
Cow position: chr15:13554443-13554557 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr15:13684178-13684063 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr15:20725527-20725413 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 114, 33

Conread position: 520-636
Cow position: chr15:26911986-26911873 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr15:26919185-26919072 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 520-636
Cow position: chr15:34284320-34284208 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr15:39326427-39326311 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr15:39621428-39621545 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 30

Conread position: 520-636
Cow position: chr15:50322684-50322799 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 521-636
Cow position: chr15:33284968-33285082 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 521-636
Cow position: chr15:35205055-35204945 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 522-631
Cow position: chr15:29861414-29861523 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 523-636
Cow position: chr15:5717803-5717913 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 532-632
Cow position: chr15:8665494-8665392 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 544-636
Cow position: chr15:39599553-39599645 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 41-290
Cow position: chr16:13881383-13881135 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 180, 89

Conread position: 509-630
Cow position: chr16:46061299-46061179 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 9

Conread position: 510-632
Cow position: chr16:41578236-41578115 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 29, 0

Conread position: 510-636
Cow position: chr16:11568108-11568231 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 78

Conread position: 511-636
Cow position: chr16:23810920-23810798 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 512-636
Cow position: chr16:37117083-37116959 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 513-632
Cow position: chr16:36120976-36121090 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 31, 0

Conread position: 514-631
Cow position: chr16:7152165-7152281 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 514-631
Cow position: chr16:7665643-7665527 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 514-631
Cow position: chr16:37452608-37452725 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 39

Conread position: 514-631
Cow position: chr16:56912708-56912826 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 514-632
Cow position: chr16:39646551-39646440 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 514-633
Cow position: chr16:30186651-30186532 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 514-635
Cow position: chr16:16096746-16096623 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 514-636
Cow position: chr16:2223391-2223516 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 514-636
Cow position: chr16:4503288-4503167 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 72, 39

Conread position: 514-636
Cow position: chr16:4910519-4910641 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr16:7542295-7542172 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr16:8076496-8076622 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 514-636
Cow position: chr16:9136187-9136062 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 514-636
Cow position: chr16:10148288-10148166 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr16:12274076-12273954 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr16:13969365-13969487 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 105, 51

Conread position: 514-636
Cow position: chr16:18757831-18757954 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 33, 99

Conread position: 514-636
Cow position: chr16:29677628-29677745 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 514-636
Cow position: chr16:31978180-31978299 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr16:33230082-33229961 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr16:38243655-38243776 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 514-636
Cow position: chr16:42253552-42253680 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr16:43308554-43308676 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 44

Conread position: 514-636
Cow position: chr16:44973500-44973381 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr16:54084042-54083921 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 514-636
Cow position: chr16:56522464-56522586 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 103, 51

Conread position: 515-627
Cow position: chr16:2417584-2417695 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 42, 0

Conread position: 515-630
Cow position: chr16:13578856-13578970 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 515-630
Cow position: chr16:33267720-33267608 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 32, 0

Conread position: 515-632
Cow position: chr16:11102816-11102933 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 515-632
Cow position: chr16:44744128-44744244 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 515-632
Cow position: chr16:50521482-50521367 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 515-636
Cow position: chr16:4902593-4902472 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 26, 48

Conread position: 515-636
Cow position: chr16:8448643-8448760 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 515-636
Cow position: chr16:10032644-10032525 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 515-636
Cow position: chr16:10039839-10039953 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 515-636
Cow position: chr16:27020076-27019960 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 515-636
Cow position: chr16:42734006-42734129 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 99

Conread position: 515-636
Cow position: chr16:45609992-45609876 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 516-632
Cow position: chr16:14242375-14242261 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 37, 0

Conread position: 516-632
Cow position: chr16:39417116-39417228 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 516-632
Cow position: chr16:47620383-47620270 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 516-632
Cow position: chr16:54226593-54226709 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 516-636
Cow position: chr16:13791521-13791403 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 516-636
Cow position: chr16:16402319-16402438 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 85, 30

Conread position: 519-636
Cow position: chr16:18052333-18052216 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 38

Conread position: 520-630
Cow position: chr16:8933425-8933532 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 33, 0

Conread position: 520-631
Cow position: chr16:13232949-13233058 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-631
Cow position: chr16:43800917-43801028 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 9

Conread position: 520-632
Cow position: chr16:820250-820138 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 520-632
Cow position: chr16:7549968-7549857 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 520-632
Cow position: chr16:20025444-20025336 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 520-632
Cow position: chr16:26068932-26068821 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 33

Conread position: 520-632
Cow position: chr16:43105515-43105623 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 520-635
Cow position: chr16:33869765-33869874 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 20, 0

Conread position: 520-635
Cow position: chr16:56796666-56796779 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr16:3246205-3246319 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 520-636
Cow position: chr16:3614747-3614631 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr16:9790631-9790745 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr16:11008345-11008229 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr16:14758738-14758619 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 520-636
Cow position: chr16:21905163-21905051 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 520-636
Cow position: chr16:30135893-30136008 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 37, 0

Conread position: 520-636
Cow position: chr16:30614980-30615094 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr16:31159572-31159686 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr16:38663710-38663822 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 520-636
Cow position: chr16:42340196-42340081 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 34

Conread position: 520-636
Cow position: chr16:49125529-49125643 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 520-636
Cow position: chr16:49169381-49169500 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 520-636
Cow position: chr16:53627428-53627542 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr16:54664800-54664914 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 33, 0

Conread position: 521-635
Cow position: chr16:48145400-48145516 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 27

Conread position: 521-636
Cow position: chr16:19047435-19047550 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 37

Conread position: 521-636
Cow position: chr16:32069494-32069604 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 44, 0

Conread position: 521-636
Cow position: chr16:35188252-35188140 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 521-636
Cow position: chr16:37380269-37380154 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 522-636
Cow position: chr16:15808973-15808860 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 524-635
Cow position: chr16:7082732-7082847 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 525-636
Cow position: chr16:26501153-26501041 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 544-636
Cow position: chr16:11775072-11775163 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 546-636
Cow position: chr16:54734221-54734131 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 474-632
Cow position: chr17:38615045-38614889 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 41

Conread position: 510-636
Cow position: chr17:21495428-21495302 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 124, 38

Conread position: 513-630
Cow position: chr17:26000168-26000049 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 513-636
Cow position: chr17:1505360-1505239 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 37

Conread position: 514-631
Cow position: chr17:22564234-22564113 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 514-632
Cow position: chr17:18860675-18860792 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 514-633
Cow position: chr17:11839761-11839645 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 514-636
Cow position: chr17:1353443-1353325 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr17:1466381-1466503 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr17:1469425-1469303 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 101

Conread position: 514-636
Cow position: chr17:2810674-2810556 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 514-636
Cow position: chr17:3471465-3471347 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr17:7142907-7142792 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chr17:11921228-11921355 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 514-636
Cow position: chr17:14003869-14003744 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 514-636
Cow position: chr17:17410339-17410217 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr17:20306096-20305975 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr17:21292996-21293114 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 28, 40

Conread position: 514-636
Cow position: chr17:21312763-21312884 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 514-636
Cow position: chr17:23798327-23798205 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr17:25189335-25189214 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr17:26884678-26884555 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 29, 75

Conread position: 515-632
Cow position: chr17:21335647-21335764 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 52

Conread position: 515-635
Cow position: chr17:11618633-11618513 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr17:1783559-1783677 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 515-636
Cow position: chr17:21738829-21738949 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 515-636
Cow position: chr17:24149229-24149110 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 39

Conread position: 515-636
Cow position: chr17:32027408-32027529 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 43

Conread position: 516-622
Cow position: chr17:25815646-25815541 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 35, 84

Conread position: 516-629
Cow position: chr17:12059048-12059161 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 516-631
Cow position: chr17:10458892-10459006 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 516-632
Cow position: chr17:12591213-12591097 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 516-635
Cow position: chr17:42347180-42347297 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 516-636
Cow position: chr17:8690397-8690515 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 516-636
Cow position: chr17:32349115-32348999 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 519-636
Cow position: chr17:17266850-17266967 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 520-630
Cow position: chr17:1035557-1035665 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 520-632
Cow position: chr17:30665312-30665202 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 520-635
Cow position: chr17:31856713-31856598 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr17:267545-267658 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 520-636
Cow position: chr17:923919-923805 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 520-636
Cow position: chr17:7654412-7654530 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr17:11832075-11832192 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 69

Conread position: 520-636
Cow position: chr17:20780549-20780437 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 520-636
Cow position: chr17:20884563-20884449 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr17:20992997-20993113 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr17:21489583-21489697 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr17:24550217-24550103 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr17:25097502-25097389 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 520-636
Cow position: chr17:26230994-26230877 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 520-636
Cow position: chr17:27203006-27203117 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 520-636
Cow position: chr17:28540070-28539956 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr17:41289982-41290094 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 521-636
Cow position: chr17:18720408-18720523 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 21, 30

Conread position: 521-636
Cow position: chr17:21959649-21959760 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 524-636
Cow position: chr17:2839945-2839834 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 524-636
Cow position: chr17:13143652-13143764 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 524-636
Cow position: chr17:33271644-33271756 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 537-636
Cow position: chr17:21874283-21874380 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 539-636
Cow position: chr17:40771861-40771763 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 48-275
Cow position: chr18:8216053-8215828 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 173, 82

Conread position: 48-275
Cow position: chr18:16057135-16057356 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 173, 39

Conread position: 510-635
Cow position: chr18:19896475-19896601 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 512-636
Cow position: chr18:52382678-52382552 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 513-635
Cow position: chr18:33606604-33606485 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 513-636
Cow position: chr18:37382115-37382240 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 514-632
Cow position: chr18:10861457-10861574 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 514-632
Cow position: chr18:15340472-15340590 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 71, 39

Conread position: 514-632
Cow position: chr18:18369387-18369506 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 514-632
Cow position: chr18:43283784-43283900 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 514-635
Cow position: chr18:18868727-18868602 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr18:7109102-7108980 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 120, 35

Conread position: 514-636
Cow position: chr18:7956118-7955996 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr18:20174157-20174276 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr18:22274865-22274983 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 514-636
Cow position: chr18:27637184-27637066 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr18:35537258-35537380 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 98

Conread position: 514-636
Cow position: chr18:42966838-42966717 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 514-636
Cow position: chr18:43555552-43555672 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr18:47812443-47812321 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 15

Conread position: 514-636
Cow position: chr18:48828802-48828928 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr18:51405934-51406056 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 19

Conread position: 514-636
Cow position: chr18:52855027-52854903 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 515-635
Cow position: chr18:35636375-35636494 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 515-635
Cow position: chr18:37689114-37688993 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 515-636
Cow position: chr18:21205335-21205215 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 515-636
Cow position: chr18:43065501-43065381 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 516-634
Cow position: chr18:19193395-19193511 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 516-636
Cow position: chr18:11166951-11166833 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 516-636
Cow position: chr18:36458904-36458786 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 519-636
Cow position: chr18:7970339-7970224 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 520-628
Cow position: chr18:4182221-4182328 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 520-630
Cow position: chr18:39434793-39434685 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 38

Conread position: 520-632
Cow position: chr18:35582131-35582244 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 520-632
Cow position: chr18:48242156-48242046 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 520-635
Cow position: chr18:45104475-45104591 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 520-635
Cow position: chr18:51643399-51643512 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 520-636
Cow position: chr18:3211844-3211725 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 520-636
Cow position: chr18:5632234-5632118 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr18:37023584-37023700 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 44

Conread position: 520-636
Cow position: chr18:55499038-55498923 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 16

Conread position: 520-636
Cow position: chr18:56181495-56181609 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 521-635
Cow position: chr18:19687989-19687874 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 522-632
Cow position: chr18:30295685-30295795 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 523-636
Cow position: chr18:2592201-2592315 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 12, 0

Conread position: 526-636
Cow position: chr18:56159422-56159314 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 536-636
Cow position: chr18:36297071-36297171 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 548-635
Cow position: chr18:7415085-7415172 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 553-636
Cow position: chr18:13360000-13359918 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 54-290
Cow position: chr19:27812950-27812716 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 167, 48

Conread position: 514-627
Cow position: chr19:729748-729861 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 514-630
Cow position: chr19:12094005-12093883 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 514-631
Cow position: chr19:2138110-2138225 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 514-631
Cow position: chr19:6516265-6516146 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 514-632
Cow position: chr19:13121280-13121395 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 62

Conread position: 514-635
Cow position: chr19:33912630-33912751 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr19:2221081-2221204 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr19:5912962-5913082 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr19:8496304-8496422 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 42, 0

Conread position: 514-636
Cow position: chr19:10786374-10786495 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 31

Conread position: 514-636
Cow position: chr19:12747780-12747901 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 43

Conread position: 514-636
Cow position: chr19:21816961-21816838 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 106
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 514-636
Cow position: chr19:38596612-38596494 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 515-632
Cow position: chr19:11110738-11110854 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 515-636
Cow position: chr19:10232416-10232537 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr19:43292044-43291926 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 29, 0

Conread position: 516-626
Cow position: chr19:32451077-32450965 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 36, 0

Conread position: 516-626
Cow position: chr19:47986851-47986740 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 516-629
Cow position: chr19:7637243-7637357 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 516-631
Cow position: chr19:16694040-16694163 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 516-632
Cow position: chr19:2734442-2734329 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 20

Conread position: 516-636
Cow position: chr19:8864741-8864622 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 516-636
Cow position: chr19:19919469-19919587 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 516-636
Cow position: chr19:46918842-46918724 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 516-636
Cow position: chr19:48960390-48960270 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 30

Conread position: 517-632
Cow position: chr19:25807309-25807424 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 32

Conread position: 520-632
Cow position: chr19:14348005-14347891 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 520-636
Cow position: chr19:1552223-1552107 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 96

Conread position: 520-636
Cow position: chr19:6417585-6417469 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 22, 38

Conread position: 520-636
Cow position: chr19:11191628-11191742 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr19:14928668-14928781 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 520-636
Cow position: chr19:42746349-42746463 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 521-636
Cow position: chr19:4445634-4445748 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 521-636
Cow position: chr19:5433564-5433680 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 88, 28

Conread position: 521-636
Cow position: chr19:10171993-10171877 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 530-635
Cow position: chr19:25645878-25645772 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 58, 0

Conread position: 541-636
Cow position: chr19:39622833-39622929 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 543-636
Cow position: chr19:40051424-40051517 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 47

Conread position: 552-636
Cow position: chr19:48409469-48409385 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 74
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 508-632
Cow position: chr2:1638616-1638492 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 41

Conread position: 513-636
Cow position: chr2:6039020-6038894 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 514-626
Cow position: chr2:46971128-46971015 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 514-629
Cow position: chr2:22113692-22113809 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 514-630
Cow position: chr2:64131429-64131313 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 514-631
Cow position: chr2:32989763-32989876 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-631
Cow position: chr2:45311111-45311232 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 514-631
Cow position: chr2:77282027-77281911 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 514-632
Cow position: chr2:39815278-39815393 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 514-632
Cow position: chr2:69238285-69238163 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 514-635
Cow position: chr2:66563225-66563344 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr2:17328756-17328635 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 514-636
Cow position: chr2:26851171-26851049 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr2:38272158-38272279 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr2:38273556-38273431 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 514-636
Cow position: chr2:39662711-39662587 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 514-636
Cow position: chr2:41622490-41622371 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 101

Conread position: 514-636
Cow position: chr2:44081443-44081321 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr2:44550835-44550952 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr2:45470013-45469895 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr2:55632782-55632664 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr2:55960605-55960725 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 61, 32

Conread position: 514-636
Cow position: chr2:59397047-59397169 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 65

Conread position: 514-636
Cow position: chr2:60903150-60903028 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr2:65269684-65269804 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 514-636
Cow position: chr2:70945410-70945290 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 514-636
Cow position: chr2:80116105-80115986 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr2:81894335-81894457 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 30

Conread position: 515-628
Cow position: chr2:43857049-43856937 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 73, 60

Conread position: 515-629
Cow position: chr2:31120039-31119927 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 515-632
Cow position: chr2:17967022-17967139 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr2:208024-207903 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr2:1210758-1210879 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 35

Conread position: 515-636
Cow position: chr2:13354681-13354562 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 515-636
Cow position: chr2:36007581-36007699 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 515-636
Cow position: chr2:51098080-51098201 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr2:72527965-72527845 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 516-629
Cow position: chr2:17114724-17114839 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 516-631
Cow position: chr2:42255439-42255327 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 516-632
Cow position: chr2:21731-21845 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 516-632
Cow position: chr2:16514787-16514675 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 516-632
Cow position: chr2:19137886-19138003 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 516-632
Cow position: chr2:46033339-46033222 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 516-632
Cow position: chr2:51594769-51594654 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 516-632
Cow position: chr2:51824929-51824814 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 516-636
Cow position: chr2:387772-387888 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 516-636
Cow position: chr2:23493541-23493424 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 516-636
Cow position: chr2:26170749-26170632 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 516-636
Cow position: chr2:33531945-33532065 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 38, 48

Conread position: 516-636
Cow position: chr2:39597970-39597849 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 516-636
Cow position: chr2:52385912-52386031 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 519-636
Cow position: chr2:25283116-25282999 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 520-626
Cow position: chr2:39419585-39419690 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-630
Cow position: chr2:55062886-55062778 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 520-631
Cow position: chr2:42293254-42293141 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 520-632
Cow position: chr2:29734825-29734713 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-632
Cow position: chr2:45912632-45912744 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr2:12051155-12051038 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 25

Conread position: 520-636
Cow position: chr2:15250182-15250067 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 80

Conread position: 520-636
Cow position: chr2:34535157-34535270 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 520-636
Cow position: chr2:36105269-36105153 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr2:41954886-41954770 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr2:45907275-45907165 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 520-636
Cow position: chr2:46020905-46020792 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr2:66480186-66480302 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr2:70781094-70780983 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr2:78220099-78219983 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr2:80963646-80963760 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr2:81927854-81927740 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 521-632
Cow position: chr2:67927796-67927905 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 29

Conread position: 521-636
Cow position: chr2:1756040-1755921 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 521-636
Cow position: chr2:5998946-5998832 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 521-636
Cow position: chr2:11412598-11412483 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 521-636
Cow position: chr2:46184266-46184381 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 522-636
Cow position: chr2:56102464-56102578 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 27

Conread position: 525-636
Cow position: chr2:6884220-6884110 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 525-636
Cow position: chr2:19294589-19294478 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 544-636
Cow position: chr2:4016861-4016953 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 544-636
Cow position: chr2:45439419-45439327 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 545-630
Cow position: chr2:60462843-60462928 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 545-630
Cow position: chr2:60468222-60468307 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 549-636
Cow position: chr2:28318881-28318967 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 513-636
Cow position: chr20:22484911-22484791 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 514-632
Cow position: chr20:28832019-28831901 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 514-632
Cow position: chr20:34847724-34847609 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 514-635
Cow position: chr20:9537187-9537066 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 514-635
Cow position: chr20:36040522-36040403 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 514-636
Cow position: chr20:17251766-17251644 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr20:23936356-23936479 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 514-636
Cow position: chr20:24000749-24000869 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr20:30817586-30817463 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 514-636
Cow position: chr20:34001341-34001464 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 514-636
Cow position: chr20:37272763-37272642 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 514-636
Cow position: chr20:37357656-37357535 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 515-623
Cow position: chr20:37338963-37338856 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 515-632
Cow position: chr20:41973702-41973818 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 515-636
Cow position: chr20:4892765-4892891 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 515-636
Cow position: chr20:11864086-11864202 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 515-636
Cow position: chr20:28296340-28296220 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 515-636
Cow position: chr20:31845511-31845631 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 515-636
Cow position: chr20:36010843-36010724 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 515-636
Cow position: chr20:39247960-39247839 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 28

Conread position: 516-631
Cow position: chr20:7659171-7659285 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 516-631
Cow position: chr20:23506424-23506536 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 516-632
Cow position: chr20:6424017-6423904 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 516-636
Cow position: chr20:5636527-5636412 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 516-636
Cow position: chr20:19751353-19751236 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 26, 36

Conread position: 519-623
Cow position: chr20:10188318-10188215 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 519-636
Cow position: chr20:11548679-11548793 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 520-631
Cow position: chr20:396559-396446 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 520-631
Cow position: chr20:24392021-24391912 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 106, 29

Conread position: 520-632
Cow position: chr20:6240478-6240589 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 520-632
Cow position: chr20:13967214-13967327 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 520-632
Cow position: chr20:20312705-20312814 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 520-632
Cow position: chr20:22704337-22704224 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 520-636
Cow position: chr20:9473570-9473686 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr20:11482092-11482206 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 520-636
Cow position: chr20:21714798-21714684 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 520-636
Cow position: chr20:27340105-27339992 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 114, 29

Conread position: 520-636
Cow position: chr20:29845093-29844979 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 520-636
Cow position: chr20:35797654-35797537 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 521-632
Cow position: chr20:19146918-19146807 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 28

Conread position: 521-636
Cow position: chr20:33435123-33435238 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 33

Conread position: 522-631
Cow position: chr20:21345469-21345361 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 522-631
Cow position: chr20:24711880-24711769 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 522-636
Cow position: chr20:11923205-11923314 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 531-629
Cow position: chr20:11188763-11188863 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 532-636
Cow position: chr20:13994844-13994742 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 540-632
Cow position: chr20:33177216-33177122 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 549-631
Cow position: chr20:12334391-12334308 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 75
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 550-636
Cow position: chr20:14735690-14735604 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 75
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 54-290
Cow position: chr21:41562964-41563198 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 175, 74

Conread position: 510-636
Cow position: chr21:27743822-27743696 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 510-636
Cow position: chr21:41155938-41155812 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 81

Conread position: 512-636
Cow position: chr21:47009164-47009287 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 513-636
Cow position: chr21:36789865-36789744 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 103

Conread position: 514-626
Cow position: chr21:40589415-40589526 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 514-630
Cow position: chr21:45439167-45439284 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 514-631
Cow position: chr21:29014841-29014959 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-632
Cow position: chr21:27863444-27863562 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 76

Conread position: 514-635
Cow position: chr21:40266194-40266074 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr21:3381009-3381134 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 34

Conread position: 514-636
Cow position: chr21:6713456-6713576 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 26

Conread position: 514-636
Cow position: chr21:10001144-10001024 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr21:10004816-10004938 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr21:15976702-15976584 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 514-636
Cow position: chr21:17890371-17890252 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 514-636
Cow position: chr21:22720297-22720176 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 514-636
Cow position: chr21:24642590-24642469 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr21:28244540-28244418 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr21:28919454-28919575 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr21:32339671-32339788 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 514-636
Cow position: chr21:38664708-38664586 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 67, 84

Conread position: 514-636
Cow position: chr21:42913674-42913796 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr21:47713935-47714054 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 514-636
Cow position: chr21:47802190-47802309 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 57

Conread position: 515-635
Cow position: chr21:9416318-9416198 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 515-635
Cow position: chr21:43357186-43357308 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 65

Conread position: 515-635
Cow position: chr21:45867002-45866882 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr21:4399871-4399752 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 515-636
Cow position: chr21:13840395-13840274 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr21:15584351-15584471 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 515-636
Cow position: chr21:23980114-23980231 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 515-636
Cow position: chr21:31676567-31676448 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 43

Conread position: 515-636
Cow position: chr21:37789931-37790051 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 515-636
Cow position: chr21:41621193-41621073 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 516-632
Cow position: chr21:911899-912014 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 516-632
Cow position: chr21:6102194-6102306 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 516-635
Cow position: chr21:20418615-20418734 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 516-636
Cow position: chr21:5612177-5612058 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 73

Conread position: 516-636
Cow position: chr21:8985619-8985496 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 94

Conread position: 516-636
Cow position: chr21:15911470-15911348 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 516-636
Cow position: chr21:30835433-30835312 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 516-636
Cow position: chr21:38449378-38449498 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 516-636
Cow position: chr21:47363669-47363790 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 118, 0

Conread position: 517-636
Cow position: chr21:28882203-28882084 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 519-636
Cow position: chr21:10410288-10410169 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 519-636
Cow position: chr21:14228503-14228621 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 520-629
Cow position: chr21:36795666-36795556 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 520-630
Cow position: chr21:34390912-34391020 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 520-631
Cow position: chr21:30607024-30607135 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-631
Cow position: chr21:41878534-41878425 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 520-632
Cow position: chr21:12461904-12462017 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 520-636
Cow position: chr21:868861-868976 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 520-636
Cow position: chr21:6998003-6997889 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 520-636
Cow position: chr21:7391214-7391327 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 520-636
Cow position: chr21:8235492-8235605 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr21:13898251-13898134 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 520-636
Cow position: chr21:14760637-14760523 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 520-636
Cow position: chr21:18790498-18790610 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 520-636
Cow position: chr21:33359971-33360084 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr21:39401658-39401543 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 29

Conread position: 521-632
Cow position: chr21:19060028-19060134 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 521-632
Cow position: chr21:20925441-20925553 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 522-632
Cow position: chr21:957734-957626 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 522-636
Cow position: chr21:20153017-20152903 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 522-636
Cow position: chr21:23586943-23586829 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 523-632
Cow position: chr21:18495030-18494922 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 509-636
Cow position: chr22:12315818-12315694 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 509-636
Cow position: chr22:17294929-17295051 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 125, 25

Conread position: 513-626
Cow position: chr22:3842623-3842510 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 514-630
Cow position: chr22:9597576-9597691 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 514-632
Cow position: chr22:21325731-21325845 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 514-632
Cow position: chr22:27835537-27835418 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 42

Conread position: 514-632
Cow position: chr22:44180595-44180478 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 514-636
Cow position: chr22:1849076-1848953 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 514-636
Cow position: chr22:2627578-2627456 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 120, 38

Conread position: 514-636
Cow position: chr22:5837272-5837150 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr22:10363070-10362952 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 514-636
Cow position: chr22:10609360-10609235 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 514-636
Cow position: chr22:12389101-12388979 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr22:12599089-12598968 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 88, 48

Conread position: 514-636
Cow position: chr22:12968067-12968187 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr22:14143108-14143230 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr22:15020396-15020514 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chr22:15668466-15668591 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr22:16044414-16044537 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chr22:27681719-27681597 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 120, 39

Conread position: 514-636
Cow position: chr22:27819011-27818884 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 514-636
Cow position: chr22:30515257-30515134 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 514-636
Cow position: chr22:32698766-32698646 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr22:32952479-32952358 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 38

Conread position: 514-636
Cow position: chr22:36539661-36539782 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 514-636
Cow position: chr22:41044907-41045030 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 514-636
Cow position: chr22:42684911-42684789 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 35

Conread position: 515-630
Cow position: chr22:23736011-23736123 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 515-631
Cow position: chr22:40374610-40374495 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 515-636
Cow position: chr22:15959766-15959886 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 15

Conread position: 515-636
Cow position: chr22:34475999-34476120 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr22:38930505-38930625 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 515-636
Cow position: chr22:43131557-43131671 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 516-630
Cow position: chr22:35579040-35579153 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 33

Conread position: 516-631
Cow position: chr22:46567891-46568001 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 516-636
Cow position: chr22:3950252-3950134 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 516-636
Cow position: chr22:6360486-6360607 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 516-636
Cow position: chr22:21567997-21567879 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 519-636
Cow position: chr22:33448083-33448199 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 519-636
Cow position: chr22:38939952-38940066 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 519-636
Cow position: chr22:39472379-39472494 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 30

Conread position: 520-631
Cow position: chr22:3965182-3965073 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-632
Cow position: chr22:1975610-1975498 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 520-635
Cow position: chr22:10292964-10292848 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 520-636
Cow position: chr22:877511-877395 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 114, 35

Conread position: 520-636
Cow position: chr22:4583557-4583440 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 520-636
Cow position: chr22:8412522-8412410 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 520-636
Cow position: chr22:11130866-11130750 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr22:13222111-13221993 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 520-636
Cow position: chr22:13841136-13841020 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 87

Conread position: 520-636
Cow position: chr22:15025114-15025227 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr22:22860915-22861027 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 520-636
Cow position: chr22:28665279-28665168 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr22:34712722-34712606 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr22:37201845-37201736 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 520-636
Cow position: chr22:37324540-37324427 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 521-635
Cow position: chr22:5467365-5467485 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 521-636
Cow position: chr22:32895215-32895099 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 521-636
Cow position: chr22:45578961-45578846 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 522-636
Cow position: chr22:26316464-26316353 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 523-636
Cow position: chr22:28058058-28058171 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 111, 39

Conread position: 527-636
Cow position: chr22:16251574-16251684 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 548-636
Cow position: chr22:30473018-30472928 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 549-636
Cow position: chr22:3945145-3945058 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-636
Cow position: chr22:16621140-16621058 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 73
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 513-636
Cow position: chr23:38455170-38455294 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 514-620
Cow position: chr23:29069433-29069539 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 514-631
Cow position: chr23:10853063-10852944 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 514-635
Cow position: chr23:16582902-16583020 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr23:1398031-1398147 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 514-636
Cow position: chr23:1647626-1647506 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 514-636
Cow position: chr23:1921219-1921338 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr23:6720273-6720395 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr23:9713330-9713207 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 514-636
Cow position: chr23:15710065-15710185 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 514-636
Cow position: chr23:16700034-16700151 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr23:22804732-22804613 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 514-636
Cow position: chr23:23114040-23113919 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr23:33711768-33711649 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 514-636
Cow position: chr23:36309430-36309308 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr23:37065857-37065730 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 515-625
Cow position: chr23:25675693-25675801 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 515-632
Cow position: chr23:4445711-4445827 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 515-636
Cow position: chr23:187185-187065 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 515-636
Cow position: chr23:3244907-3245028 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 104
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr23:33622143-33622263 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 52

Conread position: 516-629
Cow position: chr23:7845299-7845187 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 34

Conread position: 516-636
Cow position: chr23:349717-349837 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 516-636
Cow position: chr23:5162439-5162315 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 520-629
Cow position: chr23:2501852-2501959 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 520-630
Cow position: chr23:1923835-1923943 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 520-630
Cow position: chr23:38208728-38208619 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 520-632
Cow position: chr23:1655896-1655786 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-632
Cow position: chr23:14164396-14164510 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 520-636
Cow position: chr23:1670904-1670789 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 520-636
Cow position: chr23:1742359-1742244 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 32

Conread position: 520-636
Cow position: chr23:5723547-5723432 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 520-636
Cow position: chr23:10014542-10014426 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr23:13599344-13599232 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr23:18296810-18296696 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 520-636
Cow position: chr23:33601525-33601640 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr23:38854733-38854849 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr23:38973852-38973734 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 521-630
Cow position: chr23:3208618-3208726 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 523-636
Cow position: chr23:4329676-4329794 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 525-636
Cow position: chr23:5436646-5436753 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 545-636
Cow position: chr23:3247562-3247472 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 460-636
Cow position: chr24:7917326-7917501 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 46

Conread position: 510-636
Cow position: chr24:17567370-17567247 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 514-631
Cow position: chr24:16625505-16625622 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 514-632
Cow position: chr24:42007721-42007605 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr24:10125855-10125733 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr24:15861617-15861739 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr24:16645339-16645462 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 514-636
Cow position: chr24:27290852-27290732 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 514-636
Cow position: chr24:30483967-30484089 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 36

Conread position: 514-636
Cow position: chr24:31382882-31382758 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr24:36554852-36554974 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 95, 88

Conread position: 514-636
Cow position: chr24:40130109-40129988 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 515-636
Cow position: chr24:7913986-7913865 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr24:15707462-15707579 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 516-631
Cow position: chr24:24457271-24457379 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 516-632
Cow position: chr24:18485015-18485132 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 516-636
Cow position: chr24:885709-885826 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 516-636
Cow position: chr24:16509949-16509832 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 516-636
Cow position: chr24:27052515-27052633 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 520-631
Cow position: chr24:35576560-35576668 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 76, 14

Conread position: 520-632
Cow position: chr24:20943143-20943032 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 520-632
Cow position: chr24:27149374-27149261 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 520-636
Cow position: chr24:18695594-18695481 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 520-636
Cow position: chr24:18970534-18970646 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 520-636
Cow position: chr24:29673497-29673381 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr24:32054636-32054521 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr24:40850137-40850025 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 520-636
Cow position: chr24:43364336-43364221 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 521-636
Cow position: chr24:29707820-29707936 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 16

Conread position: 523-631
Cow position: chr24:32204822-32204928 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 524-632
Cow position: chr24:35074065-35073958 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 524-636
Cow position: chr24:32070934-32070827 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 20

Conread position: 542-636
Cow position: chr24:44041055-44041150 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 544-636
Cow position: chr24:17955489-17955580 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 559-636
Cow position: chr24:38347623-38347546 (view UCSC Genome Browser custom track)
Alignm length: 78
Alignm identity: 71
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 48-274
Cow position: chr25:2495604-2495379 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 69

Conread position: 48-290
Cow position: chr25:15963135-15963375 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 173, 82

Conread position: 54-259
Cow position: chr25:31371031-31370820 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 75, 61

Conread position: 54-274
Cow position: chr25:155398-155180 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 167, 76

Conread position: 510-630
Cow position: chr25:25861345-25861468 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 513-636
Cow position: chr25:28187941-28188063 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 514-619
Cow position: chr25:30450048-30449942 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-632
Cow position: chr25:16064895-16064777 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 514-632
Cow position: chr25:18201923-18202038 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 514-632
Cow position: chr25:30816892-30816773 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 514-632
Cow position: chr25:36779504-36779384 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 514-635
Cow position: chr25:36535430-36535552 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr25:1838240-1838121 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr25:5515017-5514894 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 514-636
Cow position: chr25:9957035-9957156 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 514-636
Cow position: chr25:12755484-12755607 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 514-636
Cow position: chr25:13569169-13569287 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr25:17119747-17119628 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 40

Conread position: 514-636
Cow position: chr25:18905888-18905768 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 120, 34

Conread position: 514-636
Cow position: chr25:22203683-22203801 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 514-636
Cow position: chr25:26654914-26654793 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr25:31732333-31732452 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr25:31732731-31732850 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 515-636
Cow position: chr25:5920946-5920824 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 515-636
Cow position: chr25:15634467-15634590 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 515-636
Cow position: chr25:17342460-17342339 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr25:20133312-20133429 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 515-636
Cow position: chr25:26134044-26133924 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 516-631
Cow position: chr25:11585519-11585405 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 516-631
Cow position: chr25:16001524-16001636 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 516-632
Cow position: chr25:14791758-14791641 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 516-632
Cow position: chr25:15377328-15377215 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 72

Conread position: 516-636
Cow position: chr25:4002803-4002684 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 516-636
Cow position: chr25:10135435-10135317 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 516-636
Cow position: chr25:16714268-16714384 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 516-636
Cow position: chr25:19317267-19317145 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 119

Conread position: 516-636
Cow position: chr25:21894883-21895002 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 517-636
Cow position: chr25:17566587-17566471 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 520-626
Cow position: chr25:12691681-12691790 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 520-631
Cow position: chr25:7299216-7299330 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 520-631
Cow position: chr25:20008129-20008023 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 520-632
Cow position: chr25:36081874-36081764 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 520-636
Cow position: chr25:12997592-12997477 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr25:21893335-21893218 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 520-636
Cow position: chr25:22751010-22751126 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 38

Conread position: 520-636
Cow position: chr25:33978216-33978331 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 520-636
Cow position: chr25:35333156-35333041 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 114, 27

Conread position: 520-636
Cow position: chr25:38425358-38425245 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 521-631
Cow position: chr25:1824101-1824207 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 521-632
Cow position: chr25:7216828-7216718 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 47

Conread position: 521-632
Cow position: chr25:36033434-36033325 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 521-636
Cow position: chr25:6464033-6464148 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 522-632
Cow position: chr25:12824022-12824132 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 23

Conread position: 544-635
Cow position: chr25:15440801-15440894 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 544-636
Cow position: chr25:22332740-22332648 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 512-634
Cow position: chr26:7153370-7153245 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 514-627
Cow position: chr26:26813-26928 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 514-628
Cow position: chr26:5750137-5750249 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 514-636
Cow position: chr26:798274-798395 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 514-636
Cow position: chr26:6447575-6447699 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 514-636
Cow position: chr26:15200491-15200611 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 9, 36

Conread position: 514-636
Cow position: chr26:21992124-21992005 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr26:32776484-32776605 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr26:33567020-33567143 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 40

Conread position: 514-636
Cow position: chr26:35449085-35448962 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 515-635
Cow position: chr26:19774278-19774398 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 36

Conread position: 515-636
Cow position: chr26:8811148-8811032 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 515-636
Cow position: chr26:31633749-31633631 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 516-629
Cow position: chr26:8642968-8642854 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 516-630
Cow position: chr26:32013653-32013536 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 516-632
Cow position: chr26:25394053-25393937 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 516-635
Cow position: chr26:31903187-31903069 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 516-636
Cow position: chr26:16550004-16549887 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 516-636
Cow position: chr26:21243122-21243004 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 516-636
Cow position: chr26:22354433-22354316 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 520-632
Cow position: chr26:30568641-30568751 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 520-632
Cow position: chr26:32832207-32832093 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 520-635
Cow position: chr26:613659-613775 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 34

Conread position: 520-636
Cow position: chr26:4807574-4807464 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 520-636
Cow position: chr26:10767896-10768009 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 520-636
Cow position: chr26:23097164-23097275 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 87

Conread position: 520-636
Cow position: chr26:23925969-23926084 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr26:33253300-33253417 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 521-632
Cow position: chr26:34314706-34314596 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 522-636
Cow position: chr26:21351704-21351590 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 112, 8

Conread position: 536-636
Cow position: chr26:19459689-19459588 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 77

Conread position: 48-308
Cow position: chr27:21618855-21618598 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 173, 87

Conread position: 513-636
Cow position: chr27:26428182-26428062 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 514-632
Cow position: chr27:2592494-2592615 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 514-632
Cow position: chr27:26979761-26979641 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 514-635
Cow position: chr27:8168479-8168360 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 111, 39

Conread position: 514-636
Cow position: chr27:7538128-7538006 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 44

Conread position: 514-636
Cow position: chr27:8263386-8263266 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 514-636
Cow position: chr27:10395308-10395187 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 116, 25

Conread position: 514-636
Cow position: chr27:14902702-14902581 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 34

Conread position: 514-636
Cow position: chr27:16965523-16965644 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 514-636
Cow position: chr27:23070408-23070288 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr27:23554378-23554258 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 118, 30

Conread position: 514-636
Cow position: chr27:26135088-26135210 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr27:26141721-26141842 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr27:26398307-26398188 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 515-630
Cow position: chr27:29380805-29380921 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 515-636
Cow position: chr27:17472760-17472881 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 94, 37

Conread position: 515-636
Cow position: chr27:21408611-21408490 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 516-635
Cow position: chr27:23128407-23128526 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 516-636
Cow position: chr27:1353536-1353658 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 516-636
Cow position: chr27:23890891-23891010 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 516-636
Cow position: chr27:25379943-25380064 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 520-627
Cow position: chr27:31373026-31372916 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 520-632
Cow position: chr27:6550416-6550524 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 520-632
Cow position: chr27:20514776-20514888 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 520-632
Cow position: chr27:27641055-27640935 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 520-636
Cow position: chr27:4011636-4011748 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 22

Conread position: 520-636
Cow position: chr27:6925042-6925160 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 520-636
Cow position: chr27:8942727-8942612 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 520-636
Cow position: chr27:13875685-13875802 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 40

Conread position: 520-636
Cow position: chr27:15215186-15215304 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 520-636
Cow position: chr27:15867353-15867467 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 33

Conread position: 520-636
Cow position: chr27:19660889-19661005 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 112

Conread position: 520-636
Cow position: chr27:20247850-20247736 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr27:29236535-29236652 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 520-636
Cow position: chr27:30389340-30389224 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr27:30868783-30868669 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 521-636
Cow position: chr27:22559869-22559753 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 521-636
Cow position: chr27:30988755-30988868 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 27

Conread position: 522-629
Cow position: chr27:23929934-23930040 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 522-632
Cow position: chr27:27020147-27020036 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 522-636
Cow position: chr27:20570079-20570191 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 24

Conread position: 523-636
Cow position: chr27:27038881-27038769 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 63

Conread position: 539-636
Cow position: chr27:20591955-20592052 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 48-290
Cow position: chr28:5344357-5344117 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 173, 83

Conread position: 48-290
Cow position: chr28:23056148-23056389 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 173, 80

Conread position: 514-627
Cow position: chr28:19222141-19222250 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 514-628
Cow position: chr28:5931366-5931252 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 32

Conread position: 514-630
Cow position: chr28:21355241-21355120 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 514-631
Cow position: chr28:4022398-4022281 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 514-632
Cow position: chr28:15601287-15601170 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 25

Conread position: 514-632
Cow position: chr28:16252846-16252965 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 514-632
Cow position: chr28:22739802-22739687 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 514-635
Cow position: chr28:5144511-5144625 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-635
Cow position: chr28:7590171-7590289 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr28:118040-118161 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 514-636
Cow position: chr28:2752484-2752603 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 514-636
Cow position: chr28:3011259-3011382 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 514-636
Cow position: chr28:3078671-3078790 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr28:4307887-4308014 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 514-636
Cow position: chr28:5166778-5166657 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 514-636
Cow position: chr28:7542072-7542194 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 54

Conread position: 514-636
Cow position: chr28:7644464-7644339 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 514-636
Cow position: chr28:9099946-9099827 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr28:10053319-10053442 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 514-636
Cow position: chr28:10606615-10606737 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr28:19394629-19394509 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 514-636
Cow position: chr28:21502402-21502287 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 514-636
Cow position: chr28:23410315-23410434 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chr28:23447814-23447932 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr28:27218333-27218215 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 514-636
Cow position: chr28:28903653-28903777 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 515-635
Cow position: chr28:7512574-7512695 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 515-636
Cow position: chr28:3484591-3484468 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 515-636
Cow position: chr28:10057578-10057698 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 515-636
Cow position: chr28:12363148-12363270 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 515-636
Cow position: chr28:15263705-15263826 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr28:23840213-23840092 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 35

Conread position: 516-628
Cow position: chr28:33163452-33163565 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 516-631
Cow position: chr28:10745222-10745108 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 516-632
Cow position: chr28:21598244-21598359 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 516-635
Cow position: chr28:13607897-13607777 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 39

Conread position: 519-636
Cow position: chr28:26982733-26982847 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 115, 23

Conread position: 520-632
Cow position: chr28:5838543-5838435 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 520-632
Cow position: chr28:7697974-7698085 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 520-632
Cow position: chr28:9285366-9285479 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-632
Cow position: chr28:21363751-21363640 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 520-636
Cow position: chr28:9390359-9390473 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr28:16085329-16085215 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr28:20313281-20313166 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 29

Conread position: 520-636
Cow position: chr28:21380885-21380769 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr28:25728203-25728090 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 520-636
Cow position: chr28:25806577-25806463 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 520-636
Cow position: chr28:34877963-34878079 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 521-636
Cow position: chr28:5552935-5553052 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 521-636
Cow position: chr28:18370002-18370117 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 522-636
Cow position: chr28:19024147-19024032 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 86

Conread position: 540-636
Cow position: chr28:3105234-3105141 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 546-636
Cow position: chr28:4881257-4881347 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 11

Conread position: 546-636
Cow position: chr28:30746748-30746837 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 510-629
Cow position: chr29:847635-847750 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 510-631
Cow position: chr29:12025460-12025581 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 44

Conread position: 514-630
Cow position: chr29:39567689-39567577 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 514-632
Cow position: chr29:30188334-30188451 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr29:22068737-22068861 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 121

Conread position: 514-636
Cow position: chr29:35292095-35291974 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 92

Conread position: 515-632
Cow position: chr29:17297138-17297022 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 515-636
Cow position: chr29:6168779-6168659 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 515-636
Cow position: chr29:21941603-21941483 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 515-636
Cow position: chr29:25474925-25474804 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr29:29942725-29942846 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 516-632
Cow position: chr29:4520341-4520223 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 516-636
Cow position: chr29:2984892-2984772 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 516-636
Cow position: chr29:29795381-29795501 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 516-636
Cow position: chr29:31926288-31926405 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 520-627
Cow position: chr29:6015121-6015015 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 520-632
Cow position: chr29:29769354-29769463 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 520-636
Cow position: chr29:11489723-11489838 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr29:13639370-13639486 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 57

Conread position: 520-636
Cow position: chr29:24252236-24252122 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 52, 34

Conread position: 520-636
Cow position: chr29:28195518-28195629 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 520-636
Cow position: chr29:32799708-32799824 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr29:41530847-41530731 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 521-632
Cow position: chr29:22778179-22778289 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 521-632
Cow position: chr29:30440930-30440819 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 521-636
Cow position: chr29:10018575-10018461 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 522-636
Cow position: chr29:4194119-4194234 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 506-636
Cow position: chr3:4087170-4087302 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 510-636
Cow position: chr3:71231381-71231258 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 117, 36

Conread position: 514-630
Cow position: chr3:27696997-27697109 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-630
Cow position: chr3:57553867-57553983 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 29

Conread position: 514-630
Cow position: chr3:75687456-75687570 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 514-631
Cow position: chr3:71430223-71430340 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 44

Conread position: 514-632
Cow position: chr3:30701291-30701172 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 514-632
Cow position: chr3:43727060-43726943 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 514-632
Cow position: chr3:53739204-53739320 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 514-634
Cow position: chr3:52863203-52863320 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 514-635
Cow position: chr3:27544353-27544469 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr3:1517531-1517652 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 95, 34

Conread position: 514-636
Cow position: chr3:2392981-2393101 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 514-636
Cow position: chr3:2675010-2674890 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chr3:3062549-3062425 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr3:5097188-5097068 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 106
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr3:5365658-5365539 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr3:17952639-17952518 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr3:37041400-37041276 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 514-636
Cow position: chr3:39328381-39328257 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr3:44101949-44101833 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 514-636
Cow position: chr3:48241599-48241478 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 514-636
Cow position: chr3:55318919-55319040 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 514-636
Cow position: chr3:55970488-55970368 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr3:59271524-59271402 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 30, 45

Conread position: 514-636
Cow position: chr3:61024320-61024441 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 30

Conread position: 514-636
Cow position: chr3:63860908-63861029 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 514-636
Cow position: chr3:67520188-67520310 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr3:68587004-68586882 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr3:72676072-72675954 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr3:73820388-73820508 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 12

Conread position: 514-636
Cow position: chr3:74500224-74500100 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 35

Conread position: 514-636
Cow position: chr3:76169303-76169423 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr3:76267994-76268117 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr3:79292810-79292692 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 515-622
Cow position: chr3:59000772-59000876 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 515-631
Cow position: chr3:15954105-15954220 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 515-631
Cow position: chr3:32184038-32184154 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 51

Conread position: 515-632
Cow position: chr3:47417583-47417700 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr3:15859686-15859805 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 515-636
Cow position: chr3:18067121-18066997 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 34

Conread position: 515-636
Cow position: chr3:33698711-33698591 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 515-636
Cow position: chr3:61539786-61539665 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr3:66900753-66900874 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 79

Conread position: 515-636
Cow position: chr3:83797854-83797973 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 516-620
Cow position: chr3:78945852-78945957 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 516-632
Cow position: chr3:8061108-8060993 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 60

Conread position: 516-632
Cow position: chr3:15051969-15052086 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 516-632
Cow position: chr3:46541850-46541962 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 516-636
Cow position: chr3:49650367-49650248 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 49

Conread position: 516-636
Cow position: chr3:50614620-50614499 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 516-636
Cow position: chr3:80953627-80953508 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 31

Conread position: 518-632
Cow position: chr3:67704523-67704408 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 520-630
Cow position: chr3:34937822-34937711 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 23

Conread position: 520-631
Cow position: chr3:49731664-49731774 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 520-632
Cow position: chr3:25060055-25059944 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 520-632
Cow position: chr3:27212339-27212227 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 520-632
Cow position: chr3:66609867-66609977 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-634
Cow position: chr3:84000588-84000477 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 520-635
Cow position: chr3:70334720-70334832 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 520-636
Cow position: chr3:1534641-1534758 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 520-636
Cow position: chr3:3985302-3985189 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr3:11711940-11711823 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 520-636
Cow position: chr3:12711940-12712056 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr3:30180060-30179943 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 520-636
Cow position: chr3:39171505-39171621 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr3:59884094-59884210 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr3:63269198-63269084 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 520-636
Cow position: chr3:73395092-73394983 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 520-636
Cow position: chr3:74878614-74878727 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 520-636
Cow position: chr3:76713345-76713462 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 31

Conread position: 520-636
Cow position: chr3:78894350-78894461 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 521-630
Cow position: chr3:26739440-26739549 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 34

Conread position: 521-636
Cow position: chr3:55434307-55434192 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 45

Conread position: 522-636
Cow position: chr3:65969140-65969023 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 523-631
Cow position: chr3:84175851-84175959 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 524-636
Cow position: chr3:4050167-4050056 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 524-636
Cow position: chr3:53113146-53113035 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 526-632
Cow position: chr3:75158331-75158225 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 539-632
Cow position: chr3:18056400-18056309 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 544-636
Cow position: chr3:38691453-38691545 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 547-636
Cow position: chr3:2506526-2506614 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 557-636
Cow position: chr3:3638128-3638049 (view UCSC Genome Browser custom track)
Alignm length: 80
Alignm identity: 72
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 557-636
Cow position: chr3:22872106-22872185 (view UCSC Genome Browser custom track)
Alignm length: 80
Alignm identity: 72
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 510-632
Cow position: chr4:21391809-21391931 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 512-629
Cow position: chr4:20147183-20147070 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 513-635
Cow position: chr4:65891991-65891871 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 514-624
Cow position: chr4:26683672-26683565 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 514-629
Cow position: chr4:11897297-11897413 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 514-631
Cow position: chr4:17474437-17474322 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 514-631
Cow position: chr4:27632445-27632333 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-631
Cow position: chr4:34165973-34166094 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 514-631
Cow position: chr4:34383343-34383460 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 514-632
Cow position: chr4:26011848-26011734 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 514-632
Cow position: chr4:36577633-36577748 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 514-632
Cow position: chr4:49089789-49089670 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 514-636
Cow position: chr4:1467312-1467193 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr4:13222187-13222304 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 514-636
Cow position: chr4:14919992-14919873 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr4:19314010-19313889 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr4:19584714-19584595 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr4:22236480-22236602 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 40

Conread position: 514-636
Cow position: chr4:26323738-26323615 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr4:30929600-30929479 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr4:31506026-31506154 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 514-636
Cow position: chr4:38946209-38946086 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chr4:41185912-41186032 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 120, 38

Conread position: 514-636
Cow position: chr4:44782373-44782251 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr4:46591665-46591543 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 35

Conread position: 514-636
Cow position: chr4:46597377-46597256 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr4:48137910-48137789 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr4:53999512-53999631 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 514-636
Cow position: chr4:58248403-58248279 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 514-636
Cow position: chr4:59785320-59785196 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 65

Conread position: 515-629
Cow position: chr4:37675615-37675500 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 515-632
Cow position: chr4:54851121-54851236 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 515-636
Cow position: chr4:15635451-15635571 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 515-636
Cow position: chr4:15905097-15904976 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr4:29106904-29106784 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 51

Conread position: 515-636
Cow position: chr4:42278207-42278328 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 38

Conread position: 515-636
Cow position: chr4:43865857-43865979 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 516-628
Cow position: chr4:36725037-36724924 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 516-632
Cow position: chr4:2602231-2602114 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 516-632
Cow position: chr4:11099671-11099787 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 42

Conread position: 516-632
Cow position: chr4:20299271-20299155 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 50

Conread position: 516-632
Cow position: chr4:23509592-23509475 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 516-636
Cow position: chr4:13284380-13284262 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 101

Conread position: 516-636
Cow position: chr4:46183407-46183288 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 516-636
Cow position: chr4:55395759-55395639 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 517-626
Cow position: chr4:36893354-36893245 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 54

Conread position: 517-632
Cow position: chr4:53209232-53209121 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 518-629
Cow position: chr4:38935353-38935241 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 26, 37

Conread position: 518-629
Cow position: chr4:38952547-38952437 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 520-630
Cow position: chr4:52166859-52166969 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 520-632
Cow position: chr4:47348821-47348709 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 28

Conread position: 520-635
Cow position: chr4:12591222-12591332 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-635
Cow position: chr4:52779842-52779731 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 520-636
Cow position: chr4:4321010-4321122 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 520-636
Cow position: chr4:5999198-5999313 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 34

Conread position: 520-636
Cow position: chr4:11901569-11901683 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr4:19322086-19322204 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 21

Conread position: 520-636
Cow position: chr4:27687919-27687802 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 520-636
Cow position: chr4:45367731-45367614 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 520-636
Cow position: chr4:45662519-45662631 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr4:65950647-65950533 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 521-632
Cow position: chr4:43909736-43909625 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 522-636
Cow position: chr4:25879387-25879276 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 522-636
Cow position: chr4:32259855-32259966 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 522-636
Cow position: chr4:34210026-34209909 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 522-636
Cow position: chr4:54930429-54930542 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 523-636
Cow position: chr4:54937036-54936925 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 525-636
Cow position: chr4:43369859-43369974 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 539-626
Cow position: chr4:27276569-27276657 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 547-636
Cow position: chr4:38705807-38705896 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 552-632
Cow position: chr4:67392921-67392841 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 74
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 48-282
Cow position: chr5:47874167-47874399 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 173, 87

Conread position: 51-275
Cow position: chr5:27965878-27966100 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 178, 87

Conread position: 510-627
Cow position: chr5:6045329-6045211 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 510-636
Cow position: chr5:58856138-58856014 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 114, 43

Conread position: 514-632
Cow position: chr5:4031958-4032077 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 514-632
Cow position: chr5:24485403-24485521 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 108

Conread position: 514-632
Cow position: chr5:71579207-71579090 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr5:16185119-16184998 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr5:17063055-17063179 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 12

Conread position: 514-636
Cow position: chr5:21964320-21964198 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 67, 41

Conread position: 514-636
Cow position: chr5:35208295-35208175 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 35

Conread position: 514-636
Cow position: chr5:47323494-47323376 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 514-636
Cow position: chr5:51800941-51801061 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr5:53855731-53855609 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 36

Conread position: 514-636
Cow position: chr5:54099539-54099422 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 514-636
Cow position: chr5:55756389-55756514 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 514-636
Cow position: chr5:59257922-59257804 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 515-636
Cow position: chr5:16509130-16509007 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 515-636
Cow position: chr5:19523930-19523811 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 515-636
Cow position: chr5:21944428-21944308 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 515-636
Cow position: chr5:29097398-29097278 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 515-636
Cow position: chr5:35459264-35459385 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr5:64137286-64137165 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 43

Conread position: 515-636
Cow position: chr5:64168206-64168326 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 43

Conread position: 515-636
Cow position: chr5:65883742-65883862 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 515-636
Cow position: chr5:76119584-76119464 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 516-629
Cow position: chr5:5111045-5111157 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 516-629
Cow position: chr5:56070888-56070774 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 516-632
Cow position: chr5:8024164-8024280 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 516-632
Cow position: chr5:21828897-21828781 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 516-632
Cow position: chr5:28927557-28927674 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 516-632
Cow position: chr5:32696793-32696906 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 516-632
Cow position: chr5:34300948-34300831 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 516-632
Cow position: chr5:52165148-52165263 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 516-634
Cow position: chr5:16206124-16206242 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 48

Conread position: 516-636
Cow position: chr5:29860380-29860258 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 519-636
Cow position: chr5:14473378-14473502 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 520-628
Cow position: chr5:17644629-17644736 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr5:7921379-7921489 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 520-636
Cow position: chr5:13717543-13717656 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr5:18289156-18289041 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr5:23678674-23678791 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr5:34115678-34115561 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 520-636
Cow position: chr5:42064230-42064114 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr5:43992349-43992233 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr5:55955933-55955818 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr5:56820235-56820351 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr5:72564789-72564673 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 46

Conread position: 521-636
Cow position: chr5:7140082-7140198 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 33

Conread position: 521-636
Cow position: chr5:40039744-40039859 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 522-636
Cow position: chr5:50575807-50575696 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 522-636
Cow position: chr5:66972452-66972339 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 523-627
Cow position: chr5:47871018-47871123 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 523-636
Cow position: chr5:32140686-32140797 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 33

Conread position: 527-636
Cow position: chr5:42748176-42748068 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 539-635
Cow position: chr5:41884944-41884848 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 10

Conread position: 539-636
Cow position: chr5:57526910-57527007 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 545-632
Cow position: chr5:19294487-19294574 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 510-628
Cow position: chr6:26764965-26765081 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 48

Conread position: 510-636
Cow position: chr6:54365281-54365405 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 510-636
Cow position: chr6:58363960-58364086 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 12

Conread position: 514-627
Cow position: chr6:11169745-11169632 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 514-628
Cow position: chr6:17313780-17313667 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 514-632
Cow position: chr6:27888396-27888280 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 514-632
Cow position: chr6:38441220-38441105 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 514-632
Cow position: chr6:53731569-53731451 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 514-635
Cow position: chr6:30688570-30688686 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr6:582227-582347 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr6:4691930-4692054 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr6:8804484-8804605 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr6:13565133-13565009 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 514-636
Cow position: chr6:15447153-15447278 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chr6:16411236-16411116 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 514-636
Cow position: chr6:19351111-19351229 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 514-636
Cow position: chr6:32335846-32335727 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 514-636
Cow position: chr6:34076074-34075952 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr6:37149234-37149113 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr6:38234004-38233883 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr6:44984375-44984255 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 514-636
Cow position: chr6:49685630-49685509 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr6:52025605-52025727 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 36

Conread position: 514-636
Cow position: chr6:60850341-60850460 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 515-636
Cow position: chr6:1371182-1371302 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 73, 49

Conread position: 515-636
Cow position: chr6:3978618-3978737 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 515-636
Cow position: chr6:21514564-21514688 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 515-636
Cow position: chr6:37395357-37395482 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 120

Conread position: 515-636
Cow position: chr6:41375816-41375695 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 35

Conread position: 515-636
Cow position: chr6:44127655-44127532 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 515-636
Cow position: chr6:51835444-51835323 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr6:52412905-52412786 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 515-636
Cow position: chr6:54867561-54867439 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 516-625
Cow position: chr6:60468281-60468173 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 516-632
Cow position: chr6:12542887-12543004 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 516-632
Cow position: chr6:38207447-38207562 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 23

Conread position: 516-636
Cow position: chr6:38614862-38614741 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 516-636
Cow position: chr6:46400370-46400486 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 516-636
Cow position: chr6:66874395-66874274 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 118, 0

Conread position: 518-630
Cow position: chr6:38641538-38641425 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 519-636
Cow position: chr6:12091953-12092068 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 519-636
Cow position: chr6:36928701-36928580 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 519-636
Cow position: chr6:55763895-55763780 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 520-630
Cow position: chr6:66531782-66531890 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 27

Conread position: 520-632
Cow position: chr6:67950994-67950882 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 87

Conread position: 520-635
Cow position: chr6:357847-357962 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 520-635
Cow position: chr6:20230787-20230902 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr6:4864508-4864623 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr6:11246805-11246688 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 520-636
Cow position: chr6:42565727-42565614 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 520-636
Cow position: chr6:57405086-57405198 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 520-636
Cow position: chr6:66131346-66131231 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 29

Conread position: 521-632
Cow position: chr6:58370796-58370683 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 521-635
Cow position: chr6:14914197-14914315 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 521-636
Cow position: chr6:44099125-44099012 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 32

Conread position: 522-636
Cow position: chr6:54364961-54365078 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 523-636
Cow position: chr6:5095509-5095622 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 530-636
Cow position: chr6:61515160-61515266 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 549-636
Cow position: chr6:10176284-10176371 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 510-636
Cow position: chr7:42429928-42429803 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 39

Conread position: 510-636
Cow position: chr7:68315292-68315170 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-627
Cow position: chr7:26861353-26861240 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 514-631
Cow position: chr7:43103393-43103509 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 514-632
Cow position: chr7:9136885-9136765 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chr7:5212429-5212550 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 94, 39

Conread position: 514-636
Cow position: chr7:13593816-13593694 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr7:27290479-27290601 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 36

Conread position: 514-636
Cow position: chr7:30155904-30156026 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr7:31882000-31881880 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr7:35652025-35652147 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr7:36774415-36774294 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 514-636
Cow position: chr7:40321533-40321414 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 39

Conread position: 514-636
Cow position: chr7:42431876-42431756 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chr7:44094887-44095014 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 514-636
Cow position: chr7:47931749-47931871 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 120, 35

Conread position: 514-636
Cow position: chr7:64573012-64573134 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 106

Conread position: 515-631
Cow position: chr7:67873239-67873123 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr7:9781678-9781797 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 515-636
Cow position: chr7:40425266-40425386 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 515-636
Cow position: chr7:51072290-51072170 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 516-624
Cow position: chr7:33720080-33719973 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 516-630
Cow position: chr7:41327993-41328107 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 516-631
Cow position: chr7:40952813-40952929 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 516-635
Cow position: chr7:11869790-11869910 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 516-636
Cow position: chr7:8877925-8877805 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 103, 49

Conread position: 516-636
Cow position: chr7:39402005-39401887 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 39

Conread position: 516-636
Cow position: chr7:40067706-40067587 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 516-636
Cow position: chr7:47547454-47547334 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 517-631
Cow position: chr7:14536233-14536348 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 519-632
Cow position: chr7:40008871-40008752 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 519-636
Cow position: chr7:68909229-68909116 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 520-630
Cow position: chr7:57258982-57259094 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 520-631
Cow position: chr7:32079493-32079382 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 520-631
Cow position: chr7:32372902-32372791 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 29

Conread position: 520-631
Cow position: chr7:34412232-34412341 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 520-632
Cow position: chr7:22624061-22624172 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-632
Cow position: chr7:44942496-44942385 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 520-632
Cow position: chr7:46823711-46823601 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-634
Cow position: chr7:30931932-30932046 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 26

Conread position: 520-635
Cow position: chr7:24718490-24718601 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-635
Cow position: chr7:44454239-44454350 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr7:600377-600262 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 520-636
Cow position: chr7:2896808-2896692 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr7:3283405-3283291 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 520-636
Cow position: chr7:3311885-3311771 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 520-636
Cow position: chr7:12212558-12212674 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 37

Conread position: 520-636
Cow position: chr7:17381198-17381079 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 60

Conread position: 520-636
Cow position: chr7:19267325-19267442 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 520-636
Cow position: chr7:21573334-21573218 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 87

Conread position: 520-636
Cow position: chr7:23251521-23251635 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 101
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr7:24220709-24220598 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr7:28090275-28090160 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 520-636
Cow position: chr7:33805011-33804893 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr7:48020461-48020348 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 520-636
Cow position: chr7:48406454-48406568 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr7:58923439-58923325 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr7:61765359-61765242 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 29

Conread position: 521-636
Cow position: chr7:22357442-22357555 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 524-636
Cow position: chr7:23615932-23616039 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 535-632
Cow position: chr7:33810710-33810615 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 545-632
Cow position: chr7:43784625-43784538 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 553-636
Cow position: chr7:14450351-14450268 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 75
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 48-285
Cow position: chr8:24561430-24561665 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 173, 80

Conread position: 48-290
Cow position: chr8:9522669-9522432 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 171, 82

Conread position: 510-628
Cow position: chr8:53552695-53552582 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 510-632
Cow position: chr8:17669717-17669839 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 510-636
Cow position: chr8:21826729-21826856 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 514-630
Cow position: chr8:6661392-6661508 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 40

Conread position: 514-631
Cow position: chr8:51480815-51480929 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr8:1023980-1023861 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 514-636
Cow position: chr8:6232880-6233002 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr8:9942509-9942629 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr8:13723425-13723305 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr8:15394844-15394965 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 514-636
Cow position: chr8:16144146-16144023 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 26

Conread position: 514-636
Cow position: chr8:20157744-20157869 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 514-636
Cow position: chr8:20837140-20837020 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 120, 35

Conread position: 514-636
Cow position: chr8:28412597-28412719 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr8:30244818-30244936 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 514-636
Cow position: chr8:32295712-32295834 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr8:37148138-37148017 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr8:42607263-42607382 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr8:47664888-47665009 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 514-636
Cow position: chr8:50310837-50310958 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 39

Conread position: 514-636
Cow position: chr8:54177699-54177817 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr8:55719310-55719432 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 23, 15

Conread position: 515-629
Cow position: chr8:32620974-32621089 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 515-630
Cow position: chr8:29765275-29765159 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 515-636
Cow position: chr8:9401939-9401819 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 515-636
Cow position: chr8:12058740-12058618 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 62

Conread position: 515-636
Cow position: chr8:17199417-17199536 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 515-636
Cow position: chr8:18831752-18831631 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr8:24871855-24871976 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 36

Conread position: 515-636
Cow position: chr8:41900621-41900742 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 516-626
Cow position: chr8:4500506-4500397 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 33

Conread position: 516-629
Cow position: chr8:39174229-39174343 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 516-631
Cow position: chr8:29026623-29026733 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 516-632
Cow position: chr8:18207122-18207234 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 516-636
Cow position: chr8:44437777-44437662 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 516-636
Cow position: chr8:53558591-53558710 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 73

Conread position: 520-635
Cow position: chr8:1394241-1394126 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 84

Conread position: 520-635
Cow position: chr8:11278095-11278210 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 520-635
Cow position: chr8:36465216-36465104 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr8:7149684-7149797 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 520-636
Cow position: chr8:14947286-14947400 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 520-636
Cow position: chr8:19011785-19011899 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr8:24471662-24471546 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr8:35555542-35555658 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 35, 26

Conread position: 520-636
Cow position: chr8:37347445-37347562 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 520-636
Cow position: chr8:41905609-41905721 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr8:41914517-41914629 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr8:43227983-43227868 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 520-636
Cow position: chr8:48422826-48422713 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 520-636
Cow position: chr8:55095891-55095779 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 520-636
Cow position: chr8:57208464-57208579 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 521-636
Cow position: chr8:1834930-1834818 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 521-636
Cow position: chr8:36768484-36768370 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 522-636
Cow position: chr8:23585943-23586058 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 524-635
Cow position: chr8:20926632-20926743 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 538-635
Cow position: chr8:22183706-22183609 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 539-636
Cow position: chr8:26404538-26404637 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 542-636
Cow position: chr8:3704611-3704516 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 48-290
Cow position: chr9:7445018-7445272 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 166

Conread position: 474-636
Cow position: chr9:21030292-21030452 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 46

Conread position: 510-636
Cow position: chr9:33697048-33697172 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 513-632
Cow position: chr9:11319611-11319494 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 514-630
Cow position: chr9:39681363-39681477 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 514-631
Cow position: chr9:31638619-31638503 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 514-631
Cow position: chr9:51566471-51566356 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 514-631
Cow position: chr9:63745834-63745949 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 514-632
Cow position: chr9:11123461-11123343 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 514-632
Cow position: chr9:31270804-31270919 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 514-632
Cow position: chr9:37000037-36999922 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-632
Cow position: chr9:41283039-41283153 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr9:5531969-5532091 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr9:6840017-6840145 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chr9:8534666-8534547 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr9:8901203-8901079 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 514-636
Cow position: chr9:8998373-8998500 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr9:10092370-10092249 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 514-636
Cow position: chr9:11377920-11377799 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 514-636
Cow position: chr9:15805899-15805782 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 52

Conread position: 514-636
Cow position: chr9:18002930-18002808 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 105
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr9:22152062-22151939 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr9:22443603-22443484 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr9:27279333-27279452 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr9:29185113-29184989 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 514-636
Cow position: chr9:34000596-34000480 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 514-636
Cow position: chr9:35105766-35105647 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 514-636
Cow position: chr9:35375449-35375572 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 39

Conread position: 514-636
Cow position: chr9:49764681-49764800 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 514-636
Cow position: chr9:52407188-52407310 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr9:1756120-1756001 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 516-632
Cow position: chr9:5500879-5500997 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 516-636
Cow position: chr9:1997163-1997283 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 88

Conread position: 516-636
Cow position: chr9:10819805-10819689 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 520-629
Cow position: chr9:29035006-29034894 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 520-631
Cow position: chr9:33114375-33114485 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 520-631
Cow position: chr9:43871005-43871117 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 520-632
Cow position: chr9:1952240-1952129 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 24

Conread position: 520-632
Cow position: chr9:38343917-38344030 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 520-634
Cow position: chr9:32676707-32676821 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 29

Conread position: 520-635
Cow position: chr9:51720870-51720760 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 520-636
Cow position: chr9:1972972-1973085 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 520-636
Cow position: chr9:6225425-6225310 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 520-636
Cow position: chr9:11168760-11168873 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 520-636
Cow position: chr9:21888198-21888310 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 520-636
Cow position: chr9:35306088-35305973 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 114, 29

Conread position: 520-636
Cow position: chr9:42445953-42445836 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 520-636
Cow position: chr9:47906251-47906137 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 69

Conread position: 520-636
Cow position: chr9:50543396-50543279 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 520-636
Cow position: chr9:50667451-50667567 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 29

Conread position: 521-632
Cow position: chr9:11969217-11969327 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 521-636
Cow position: chr9:29091823-29091938 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 524-636
Cow position: chr9:26390802-26390911 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 530-636
Cow position: chr9:7409816-7409921 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 530-636
Cow position: chr9:42998431-42998324 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 543-630
Cow position: chr9:1520687-1520600 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 545-632
Cow position: chr9:41995762-41995849 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 48-275
Cow position: chrX:26414744-26414520 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 73, 67

Conread position: 48-278
Cow position: chrX:30706423-30706195 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 67

Conread position: 48-290
Cow position: chrX:29146250-29146491 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 173, 82

Conread position: 435-632
Cow position: chrX:38439590-38439394 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 120, 81

Conread position: 458-636
Cow position: chrX:25282929-25283102 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 514-630
Cow position: chrX:11856462-11856347 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 514-630
Cow position: chrX:12018324-12018210 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 514-630
Cow position: chrX:41068757-41068639 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 514-631
Cow position: chrX:10831458-10831576 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 514-632
Cow position: chrX:17498117-17498001 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 514-632
Cow position: chrX:42235492-42235612 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 514-635
Cow position: chrX:37750222-37750344 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chrX:6278466-6278588 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 106
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chrX:10516285-10516168 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 93

Conread position: 514-636
Cow position: chrX:12095742-12095861 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chrX:12116079-12115958 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 514-636
Cow position: chrX:14925032-14924912 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 120, 9

Conread position: 514-636
Cow position: chrX:20168590-20168470 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chrX:21327943-21327818 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 514-636
Cow position: chrX:21672586-21672468 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chrX:24365789-24365913 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chrX:27261223-27261100 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 93

Conread position: 514-636
Cow position: chrX:27516562-27516441 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 28, 50

Conread position: 514-636
Cow position: chrX:27946022-27946144 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chrX:28845865-28845743 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 38

Conread position: 514-636
Cow position: chrX:35681374-35681253 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 514-636
Cow position: chrX:36961673-36961555 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chrX:38964140-38964016 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 514-636
Cow position: chrX:40480837-40480956 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 514-636
Cow position: chrX:40680646-40680523 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 514-636
Cow position: chrX:42855490-42855367 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 77

Conread position: 514-636
Cow position: chrX:46587854-46587732 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 515-630
Cow position: chrX:29509407-29509523 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 22

Conread position: 515-631
Cow position: chrX:33000936-33000820 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 515-632
Cow position: chrX:47873305-47873420 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 515-636
Cow position: chrX:15815115-15814999 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 515-636
Cow position: chrX:23563760-23563878 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 515-636
Cow position: chrX:27228157-27228040 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 515-636
Cow position: chrX:30133287-30133408 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 49

Conread position: 515-636
Cow position: chrX:40648017-40647898 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 516-626
Cow position: chrX:4515715-4515606 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 516-632
Cow position: chrX:22387216-22387326 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 516-632
Cow position: chrX:27680428-27680315 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 87

Conread position: 516-632
Cow position: chrX:39558318-39558434 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 516-636
Cow position: chrX:13382361-13382242 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 516-636
Cow position: chrX:23513985-23514103 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 516-636
Cow position: chrX:34441418-34441539 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 516-636
Cow position: chrX:40826721-40826839 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 516-636
Cow position: chrX:41743944-41743824 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 38

Conread position: 518-632
Cow position: chrX:37781081-37781195 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 519-632
Cow position: chrX:36975979-36975868 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 520-632
Cow position: chrX:616233-616346 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 520-632
Cow position: chrX:13785334-13785447 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 40

Conread position: 520-635
Cow position: chrX:29549519-29549634 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chrX:161438-161325 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chrX:6234424-6234540 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chrX:8797282-8797165 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 520-636
Cow position: chrX:8925725-8925613 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 520-636
Cow position: chrX:20881913-20882025 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 520-636
Cow position: chrX:29601802-29601918 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chrX:31515199-31515081 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 72

Conread position: 520-636
Cow position: chrX:34502946-34502834 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 520-636
Cow position: chrX:41027185-41027068 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 520-636
Cow position: chrX:41199132-41199019 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chrX:42875009-42874896 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 521-622
Cow position: chrX:11717758-11717862 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 521-635
Cow position: chrX:22813093-22812980 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 44

Conread position: 521-636
Cow position: chrX:23497642-23497756 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 521-636
Cow position: chrX:41166937-41167052 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 521-636
Cow position: chrX:42461719-42461832 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 522-636
Cow position: chrX:16348540-16348656 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 523-636
Cow position: chrX:42994636-42994529 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 524-631
Cow position: chrX:17949466-17949570 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 525-636
Cow position: chrX:34410247-34410358 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 40

Conread position: 543-636
Cow position: chrX:35284626-35284532 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 544-632
Cow position: chrX:44397021-44396934 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 544-635
Cow position: chrX:11614704-11614613 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 544-636
Cow position: chrX:5872323-5872233 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 84
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 550-636
Cow position: chrX:27705584-27705499 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 0