• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8017B08.3
        

               
Conread position:
               
1-419
               

               
Cow position:
               
chr10:21939162-21938741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
104, 95
               

               
Conread position:
               
1-672
               

               
Cow position:
               
chr10:8996678-8996001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 533
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr10:8996762-8996014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 700
               

               
Conread position:
               
21-738
               

               
Cow position:
               
chr10:21939380-21938673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
203, 95
               

               
Conread position:
               
36-745
               

               
Cow position:
               
chr10:8996895-8996180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 498
               

               
Conread position:
               
48-695
               

               
Cow position:
               
chr10:9010527-9009874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 53
               

               
Conread position:
               
63-717
               

               
Cow position:
               
chr10:8996784-8996124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
145-737
               

               
Cow position:
               
chr10:9010511-9009916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
332, 0
               

               
Conread position:
               
157-722
               

               
Cow position:
               
chr10:21939325-21938771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
281, 101
               

               
Conread position:
               
164-674
               

               
Cow position:
               
chr10:21939164-21938654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
294, 395
               

               
Conread position:
               
190-705
               

               
Cow position:
               
chr10:9010550-9010033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
272, 282
               

               
Conread position:
               
196-743
               

               
Cow position:
               
chr10:8996900-8996350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
265, 502
               

               
Conread position:
               
273-746
               

               
Cow position:
               
chr10:21939377-21938915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
370-745
               

               
Cow position:
               
chr10:9031199-9031577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 50
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr11:74554601-74554179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
122, 314
               

               
Conread position:
               
1-538
               

               
Cow position:
               
chr11:74554769-74554226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
1-723
               

               
Cow position:
               
chr11:74555021-74554293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 537
               

               
Conread position:
               
3-757
               

               
Cow position:
               
chr11:74555103-74554341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 146
               

               
Conread position:
               
15-327
               

               
Cow position:
               
chr11:50368592-50368277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
36-737
               

               
Cow position:
               
chr11:74554902-74554195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 617
               

               
Conread position:
               
83-745
               

               
Cow position:
               
chr11:74555107-74554439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 479
               

               
Conread position:
               
134-411
               

               
Cow position:
               
chr11:50368554-50368277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
89, 94
               

               
Conread position:
               
273-576
               

               
Cow position:
               
chr11:50368583-50368277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
140, 146
               

               
Conread position:
               
1-655
               

               
Cow position:
               
chr13:24162990-24163650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 217
               

               
Conread position:
               
1-731
               

               
Cow position:
               
chr13:22125180-22125916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 92
               

               
Conread position:
               
1-731
               

               
Cow position:
               
chr13:24162906-24163642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 92
               

               
Conread position:
               
1-744
               

               
Cow position:
               
chr13:22124844-22125593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 387
               

               
Conread position:
               
1-744
               

               
Cow position:
               
chr13:22125012-22125761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
1-744
               

               
Cow position:
               
chr13:22125096-22125845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
1-744
               

               
Cow position:
               
chr13:24162570-24163319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 387
               

               
Conread position:
               
1-744
               

               
Cow position:
               
chr13:24162738-24163487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
1-744
               

               
Cow position:
               
chr13:24162822-24163571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
1-748
               

               
Cow position:
               
chr13:22124928-22125681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 568
               

               
Conread position:
               
1-748
               

               
Cow position:
               
chr13:24162654-24163407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 568
               

               
Conread position:
               
15-744
               

               
Cow position:
               
chr13:22124690-22125425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
15-744
               

               
Cow position:
               
chr13:24162416-24163151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 204
               

               
Conread position:
               
23-600
               

               
Cow position:
               
chr13:39930585-39931166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 63
               

               
Conread position:
               
36-683
               

               
Cow position:
               
chr13:39984186-39984839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
36-745
               

               
Cow position:
               
chr13:39984018-39984733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
142-745
               

               
Cow position:
               
chr13:22124736-22125342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 251
               

               
Conread position:
               
142-745
               

               
Cow position:
               
chr13:24162462-24163068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 0
               

               
Conread position:
               
149-694
               

               
Cow position:
               
chr13:39930630-39931176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 236
               

               
Conread position:
               
230-747
               

               
Cow position:
               
chr13:39930627-39931147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 155
               

               
Conread position:
               
356-745
               

               
Cow position:
               
chr13:39930585-39930977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 63
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr14:663401-663110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr14:434064-434405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
124, 148
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr14:25836805-25837217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr14:3100835-3100347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
157, 230
               

               
Conread position:
               
1-578
               

               
Cow position:
               
chr14:3155900-3156483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1-584
               

               
Cow position:
               
chr14:25860194-25860783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
127, 225
               

               
Conread position:
               
1-586
               

               
Cow position:
               
chr14:3127852-3127260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 148
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr14:25877245-25877843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 225
               

               
Conread position:
               
1-634
               

               
Cow position:
               
chr14:25836553-25837192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
122, 225
               

               
Conread position:
               
1-651
               

               
Cow position:
               
chr14:447591-448247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 553
               

               
Conread position:
               
1-669
               

               
Cow position:
               
chr14:3080340-3079666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 146
               

               
Conread position:
               
1-696
               

               
Cow position:
               
chr14:680561-681262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 74
               

               
Conread position:
               
1-696
               

               
Cow position:
               
chr14:3101417-3100722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
79, 90
               

               
Conread position:
               
1-707
               

               
Cow position:
               
chr14:3061655-3060943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 216
               

               
Conread position:
               
1-713
               

               
Cow position:
               
chr14:3101082-3100369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
1-723
               

               
Cow position:
               
chr14:25783766-25784494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
121, 92
               

               
Conread position:
               
1-723
               

               
Cow position:
               
chr14:25859522-25860250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
64, 46
               

               
Conread position:
               
1-724
               

               
Cow position:
               
chr14:25895704-25896431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr14:3155411-3156138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 306
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr14:25859438-25860186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
124, 400
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr14:25877077-25877825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
127, 400
               

               
Conread position:
               
1-744
               

               
Cow position:
               
chr14:3128020-3127271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 555
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr14:680225-680975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 76
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr14:3061571-3060821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr14:3080424-3079674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 92
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr14:3080508-3079758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 148
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr14:3080760-3080010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 296
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr14:3080844-3080094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 148
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr14:3128104-3127354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 428
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr14:3155747-3156482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
411, 89
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr14:25836049-25836799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
95, 100
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr14:25836385-25837135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 100
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr14:25859858-25860608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr14:25876909-25877659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr14:25895200-25895950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 399
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr14:25895368-25896118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr14:25895536-25896286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 323
               

               
Conread position:
               
1-746
               

               
Cow position:
               
chr14:3101166-3100420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 106
               

               
Conread position:
               
1-749
               

               
Cow position:
               
chr14:3061403-3060649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
2-743
               

               
Cow position:
               
chr14:25836134-25836881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 63
               

               
Conread position:
               
3-588
               

               
Cow position:
               
chr14:433814-434405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 393
               

               
Conread position:
               
4-716
               

               
Cow position:
               
chr14:3080925-3080207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 45
               

               
Conread position:
               
16-711
               

               
Cow position:
               
chr14:25894882-25895580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
18-746
               

               
Cow position:
               
chr14:25876422-25877156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 47
               

               
Conread position:
               
23-745
               

               
Cow position:
               
chr14:680499-681227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 63
               

               
Conread position:
               
23-745
               

               
Cow position:
               
chr14:3080990-3080262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
25-716
               

               
Cow position:
               
chr14:25836493-25837190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 375
               

               
Conread position:
               
25-734
               

               
Cow position:
               
chr14:25860050-25860765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
103, 287
               

               
Conread position:
               
60-745
               

               
Cow position:
               
chr14:3081038-3080346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
63-734
               

               
Cow position:
               
chr14:447569-448246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 238
               

               
Conread position:
               
64-706
               

               
Cow position:
               
chr14:25783325-25783973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 587
               

               
Conread position:
               
64-707
               

               
Cow position:
               
chr14:25795117-25794468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
71, 253
               

               
Conread position:
               
66-663
               

               
Cow position:
               
chr14:3155881-3156484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
70-538
               

               
Cow position:
               
chr14:25910818-25911292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 234
               

               
Conread position:
               
82-745
               

               
Cow position:
               
chr14:3155408-3156062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
45, 354
               

               
Conread position:
               
128-422
               

               
Cow position:
               
chr14:663439-663145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
75, 70
               

               
Conread position:
               
129-373
               

               
Cow position:
               
chr14:663354-663110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
129-724
               

               
Cow position:
               
chr14:3061692-3061095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 402
               

               
Conread position:
               
138-745
               

               
Cow position:
               
chr14:447563-448173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 281
               

               
Conread position:
               
157-745
               

               
Cow position:
               
chr14:3128113-3127522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 225
               

               
Conread position:
               
162-744
               

               
Cow position:
               
chr14:433808-434393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 0
               

               
Conread position:
               
163-589
               

               
Cow position:
               
chr14:3155408-3155837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 316
               

               
Conread position:
               
163-737
               

               
Cow position:
               
chr14:3061742-3061165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 66
               

               
Conread position:
               
163-745
               

               
Cow position:
               
chr14:25894945-25895530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 224
               

               
Conread position:
               
164-745
               

               
Cow position:
               
chr14:680143-680723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 16
               

               
Conread position:
               
165-745
               

               
Cow position:
               
chr14:25836048-25836631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
43, 48
               

               
Conread position:
               
170-716
               

               
Cow position:
               
chr14:447511-448060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 301
               

               
Conread position:
               
177-745
               

               
Cow position:
               
chr14:25876332-25876903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
299, 0
               

               
Conread position:
               
180-538
               

               
Cow position:
               
chr14:663471-663110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
209, 205
               

               
Conread position:
               
189-724
               

               
Cow position:
               
chr14:25859293-25859831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
287, 0
               

               
Conread position:
               
190-745
               

               
Cow position:
               
chr14:3128164-3127606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 116
               

               
Conread position:
               
212-745
               

               
Cow position:
               
chr14:433774-434310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 31
               

               
Conread position:
               
226-704
               

               
Cow position:
               
chr14:25910809-25911290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
162, 171
               

               
Conread position:
               
229-743
               

               
Cow position:
               
chr14:25783325-25783842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
157, 148
               

               
Conread position:
               
234-671
               

               
Cow position:
               
chr14:3155395-3155835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 80
               

               
Conread position:
               
241-745
               

               
Cow position:
               
chr14:25859261-25859768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
182, 189
               

               
Conread position:
               
244-744
               

               
Cow position:
               
chr14:3155324-3155824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 45
               

               
Conread position:
               
246-745
               

               
Cow position:
               
chr14:3061743-3061241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 236
               

               
Conread position:
               
254-622
               

               
Cow position:
               
chr14:663480-663110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
168, 6
               

               
Conread position:
               
334-746
               

               
Cow position:
               
chr14:25836049-25836464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
503-745
               

               
Cow position:
               
chr14:447511-447753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr15:19139070-19138612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
140, 377
               

               
Conread position:
               
15-743
               

               
Cow position:
               
chr15:19139392-19138658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 150
               

               
Conread position:
               
129-745
               

               
Cow position:
               
chr15:19139359-19138740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
129, 117
               

               
Conread position:
               
144-736
               

               
Cow position:
               
chr16:14627857-14627262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 86
               

               
Conread position:
               
229-731
               

               
Cow position:
               
chr16:14627436-14626931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
238, 337
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr17:44468030-44468384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
126, 352
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr17:22452211-22451763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
122, 379
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr17:22452295-22451839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1-595
               

               
Cow position:
               
chr17:44467778-44468378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
1-596
               

               
Cow position:
               
chr17:41440785-41440184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 428
               

               
Conread position:
               
1-677
               

               
Cow position:
               
chr17:22552178-22551496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
130, 633
               

               
Conread position:
               
1-698
               

               
Cow position:
               
chr17:44467610-44468313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
124, 394
               

               
Conread position:
               
1-705
               

               
Cow position:
               
chr17:22552934-22552225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 306
               

               
Conread position:
               
1-722
               

               
Cow position:
               
chr17:22552262-22551535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
127, 300
               

               
Conread position:
               
1-741
               

               
Cow position:
               
chr17:41440953-41440206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 79
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr17:22552514-22551766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 92
               

               
Conread position:
               
1-744
               

               
Cow position:
               
chr17:44467526-44468275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 292
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr17:22552850-22552100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 425
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr17:41441037-41440287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 338
               

               
Conread position:
               
5-743
               

               
Cow position:
               
chr17:22553013-22552270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 5
               

               
Conread position:
               
6-667
               

               
Cow position:
               
chr17:41440864-41440198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 143
               

               
Conread position:
               
7-734
               

               
Cow position:
               
chr17:44467364-44468097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 478
               

               
Conread position:
               
49-674
               

               
Cow position:
               
chr17:22473300-22473932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
85, 153
               

               
Conread position:
               
53-723
               

               
Cow position:
               
chr17:22452411-22451735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
74, 577
               

               
Conread position:
               
64-702
               

               
Cow position:
               
chr17:22452316-22451673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 52
               

               
Conread position:
               
85-695
               

               
Cow position:
               
chr17:22499393-22498777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
43, 341
               

               
Conread position:
               
100-711
               

               
Cow position:
               
chr17:22590253-22589637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 99
               

               
Conread position:
               
143-705
               

               
Cow position:
               
chr17:22452402-22451838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 334
               

               
Conread position:
               
157-745
               

               
Cow position:
               
chr17:22590109-22589518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
240, 230
               

               
Conread position:
               
157-745
               

               
Cow position:
               
chr17:41441046-41440455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 72
               

               
Conread position:
               
163-736
               

               
Cow position:
               
chr17:22553105-22552529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
146, 135
               

               
Conread position:
               
164-745
               

               
Cow position:
               
chr17:44467355-44467940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
12, 307
               

               
Conread position:
               
171-745
               

               
Cow position:
               
chr17:41441116-41440539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 58
               

               
Conread position:
               
229-737
               

               
Cow position:
               
chr17:22452400-22451889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
72, 82
               

               
Conread position:
               
235-745
               

               
Cow position:
               
chr17:22473405-22473918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
146, 139
               

               
Conread position:
               
247-745
               

               
Cow position:
               
chr17:22553105-22552604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
92, 97
               

               
Conread position:
               
249-737
               

               
Cow position:
               
chr17:22499394-22498903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
217, 449
               

               
Conread position:
               
253-745
               

               
Cow position:
               
chr17:41441118-41440623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 229
               

               
Conread position:
               
312-743
               

               
Cow position:
               
chr17:22452401-22451967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
165, 374
               

               
Conread position:
               
418-745
               

               
Cow position:
               
chr17:22499393-22499063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
476-743
               

               
Cow position:
               
chr17:22452402-22452135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
231, 219
               

               
Conread position:
               
504-746
               

               
Cow position:
               
chr17:41441116-41440874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr18:56267457-56267117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
124, 142
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr18:33064011-33063598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
126, 211
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr18:53610128-53609674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
126, 157
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr18:50281845-50282342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr18:43168047-43168547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
1-579
               

               
Cow position:
               
chr18:40306760-40307344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
133, 469
               

               
Conread position:
               
1-584
               

               
Cow position:
               
chr18:56128628-56129216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
133, 201
               

               
Conread position:
               
1-585
               

               
Cow position:
               
chr18:56329428-56328838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 222
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr18:42792311-42792903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
1-589
               

               
Cow position:
               
chr18:42724501-42723907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
114, 215
               

               
Conread position:
               
1-652
               

               
Cow position:
               
chr18:55067023-55066366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
122, 166
               

               
Conread position:
               
1-665
               

               
Cow position:
               
chr18:56329512-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 372
               

               
Conread position:
               
1-674
               

               
Cow position:
               
chr18:53610380-53609702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 133
               

               
Conread position:
               
1-674
               

               
Cow position:
               
chr18:56316388-56317067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 606
               

               
Conread position:
               
1-674
               

               
Cow position:
               
chr18:56391512-56390833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 218
               

               
Conread position:
               
1-676
               

               
Cow position:
               
chr18:41949009-41948327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
95, 99
               

               
Conread position:
               
1-676
               

               
Cow position:
               
chr18:44184631-44183950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
128, 232
               

               
Conread position:
               
1-676
               

               
Cow position:
               
chr18:52012188-52011504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 651
               

               
Conread position:
               
1-695
               

               
Cow position:
               
chr18:51789554-51788854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
131, 200
               

               
Conread position:
               
1-703
               

               
Cow position:
               
chr18:53635537-53634831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
124, 484
               

               
Conread position:
               
1-705
               

               
Cow position:
               
chr18:51812629-51811920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
130, 232
               

               
Conread position:
               
1-706
               

               
Cow position:
               
chr18:49021738-49022438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 147
               

               
Conread position:
               
1-712
               

               
Cow position:
               
chr18:51812713-51811996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
134, 316
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr18:42792143-42792865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
124, 148
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr18:50848758-50849480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
1-722
               

               
Cow position:
               
chr18:42791975-42792702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
130, 372
               

               
Conread position:
               
1-722
               

               
Cow position:
               
chr18:42960128-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
126, 311
               

               
Conread position:
               
1-722
               

               
Cow position:
               
chr18:51789470-51788743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
127, 316
               

               
Conread position:
               
1-722
               

               
Cow position:
               
chr18:56128460-56129186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 463
               

               
Conread position:
               
1-723
               

               
Cow position:
               
chr18:40324797-40324069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
122, 425
               

               
Conread position:
               
1-723
               

               
Cow position:
               
chr18:41949177-41948449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
1-723
               

               
Cow position:
               
chr18:43022732-43022004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
141, 125
               

               
Conread position:
               
1-723
               

               
Cow position:
               
chr18:44240096-44240824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
53, 45
               

               
Conread position:
               
1-731
               

               
Cow position:
               
chr18:43022816-43022080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
127, 294
               

               
Conread position:
               
1-731
               

               
Cow position:
               
chr18:56128292-56129028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 425
               

               
Conread position:
               
1-734
               

               
Cow position:
               
chr18:42985221-42984482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
126, 300
               

               
Conread position:
               
1-734
               

               
Cow position:
               
chr18:49032875-49032136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 652
               

               
Conread position:
               
1-734
               

               
Cow position:
               
chr18:53586744-53586005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 166
               

               
Conread position:
               
1-734
               

               
Cow position:
               
chr18:56316304-56317043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 659
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr18:41197578-41198320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
127, 367
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr18:43022984-43022242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 31
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr18:43093583-43092841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr18:44184799-44184057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr18:44398352-44397610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
127, 165
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr18:49032791-49032049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr18:52447447-52448189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
133, 484
               

               
Conread position:
               
1-739
               

               
Cow position:
               
chr18:42791891-42792635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
1-739
               

               
Cow position:
               
chr18:43175521-43174777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:42693709-42692961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 92
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:44398268-44397520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
127, 201
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:33064767-33064017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 99
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:40306340-40307090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
120, 148
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:44184715-44183965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:49032959-49032209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 92
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:49033043-49032293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 370
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:49033211-49032461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 217
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:50059536-50058786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
128, 211
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:50848674-50849424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 99
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:52012356-52011606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 377
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:53635873-53635123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 494
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:55523479-55524229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
122, 160
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:56329680-56328930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:56329932-56329182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 299
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:56330184-56329434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 222
               

               
Conread position:
               
1-746
               

               
Cow position:
               
chr18:56316220-56316971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 395
               

               
Conread position:
               
1-760
               

               
Cow position:
               
chr18:42744714-42743949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
1-767
               

               
Cow position:
               
chr18:42675150-42674378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
776
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
127, 316
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr18:1418174-1418598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
2-743
               

               
Cow position:
               
chr18:42694044-42693297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 293
               

               
Conread position:
               
2-745
               

               
Cow position:
               
chr18:43167712-43168461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
73, 83
               

               
Conread position:
               
3-446
               

               
Cow position:
               
chr18:51839388-51838942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
3-454
               

               
Cow position:
               
chr18:56494017-56494471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
3-569
               

               
Cow position:
               
chr18:47846596-47846024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
3-578
               

               
Cow position:
               
chr18:55497617-55497036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
122, 395
               

               
Conread position:
               
3-722
               

               
Cow position:
               
chr18:51400369-51401094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 135
               

               
Conread position:
               
3-723
               

               
Cow position:
               
chr18:49022317-49023041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
129, 262
               

               
Conread position:
               
3-738
               

               
Cow position:
               
chr18:53610462-53609721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
3-745
               

               
Cow position:
               
chr18:53636039-53635291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 218
               

               
Conread position:
               
3-745
               

               
Cow position:
               
chr18:56128126-56128874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
4-671
               

               
Cow position:
               
chr18:40075029-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
101, 89
               

               
Conread position:
               
4-705
               

               
Cow position:
               
chr18:43093664-43092958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 55
               

               
Conread position:
               
6-710
               

               
Cow position:
               
chr18:53559934-53560644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
15-327
               

               
Cow position:
               
chr18:56391969-56391654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
16-403
               

               
Cow position:
               
chr18:56494114-56494503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
115, 387
               

               
Conread position:
               
16-662
               

               
Cow position:
               
chr18:40306689-40307343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 134
               

               
Conread position:
               
16-722
               

               
Cow position:
               
chr18:53559860-53560572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
110, 372
               

               
Conread position:
               
16-743
               

               
Cow position:
               
chr18:56128389-56129124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 710
               

               
Conread position:
               
16-767
               

               
Cow position:
               
chr18:51839543-51838786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
761
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
115, 419
               

               
Conread position:
               
22-745
               

               
Cow position:
               
chr18:42694192-42693463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 69
               

               
Conread position:
               
23-494
               

               
Cow position:
               
chr18:49021676-49022154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
100, 116
               

               
Conread position:
               
23-668
               

               
Cow position:
               
chr18:55497681-55497030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 355
               

               
Conread position:
               
23-734
               

               
Cow position:
               
chr18:56391574-56390857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 102
               

               
Conread position:
               
23-743
               

               
Cow position:
               
chr18:42837827-42837101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
105, 294
               

               
Conread position:
               
23-743
               

               
Cow position:
               
chr18:56329574-56328848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
23-745
               

               
Cow position:
               
chr18:49033105-49032377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 63
               

               
Conread position:
               
25-673
               

               
Cow position:
               
chr18:42792251-42792905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
80, 71
               

               
Conread position:
               
25-705
               

               
Cow position:
               
chr18:50059092-50058409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
106, 209
               

               
Conread position:
               
25-712
               

               
Cow position:
               
chr18:50083309-50084002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
103, 114
               

               
Conread position:
               
25-712
               

               
Cow position:
               
chr18:53509265-53509958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
102, 348
               

               
Conread position:
               
25-713
               

               
Cow position:
               
chr18:53525719-53526413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
102, 372
               

               
Conread position:
               
29-734
               

               
Cow position:
               
chr18:55067080-55066368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 121
               

               
Conread position:
               
36-737
               

               
Cow position:
               
chr18:44398401-44397694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
87, 197
               

               
Conread position:
               
36-743
               

               
Cow position:
               
chr18:42791842-42792555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
98, 498
               

               
Conread position:
               
36-745
               

               
Cow position:
               
chr18:42837898-42837183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 428
               

               
Conread position:
               
36-746
               

               
Cow position:
               
chr18:53586961-53586245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
37-446
               

               
Cow position:
               
chr18:42744258-42743846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 196
               

               
Conread position:
               
37-724
               

               
Cow position:
               
chr18:51400236-51400928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
37-737
               

               
Cow position:
               
chr18:42675198-42674492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
86, 258
               

               
Conread position:
               
37-737
               

               
Cow position:
               
chr18:43175317-43174611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
91, 280
               

               
Conread position:
               
39-587
               

               
Cow position:
               
chr18:49022688-49023241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 5
               

               
Conread position:
               
43-723
               

               
Cow position:
               
chr18:51812755-51812069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 159
               

               
Conread position:
               
43-743
               

               
Cow position:
               
chr18:51789848-51789142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
46-677
               

               
Cow position:
               
chr18:40306553-40307190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 156
               

               
Conread position:
               
47-723
               

               
Cow position:
               
chr18:42985511-42984829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
81, 107
               

               
Conread position:
               
48-743
               

               
Cow position:
               
chr18:51368468-51367768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 437
               

               
Conread position:
               
49-613
               

               
Cow position:
               
chr18:50083669-50084239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
49-744
               

               
Cow position:
               
chr18:42693913-42693213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 43
               

               
Conread position:
               
52-695
               

               
Cow position:
               
chr18:50099281-50099930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 170
               

               
Conread position:
               
52-716
               

               
Cow position:
               
chr18:33064380-33063710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
53-734
               

               
Cow position:
               
chr18:49022617-49023304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
73, 171
               

               
Conread position:
               
53-746
               

               
Cow position:
               
chr18:40306308-40307007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
72, 92
               

               
Conread position:
               
55-745
               

               
Cow position:
               
chr18:50848476-50849172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
70, 581
               

               
Conread position:
               
57-745
               

               
Cow position:
               
chr18:49033323-49032629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
62-722
               

               
Cow position:
               
chr18:42724608-42723942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 545
               

               
Conread position:
               
63-425
               

               
Cow position:
               
chr18:56267479-56267111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
63-737
               

               
Cow position:
               
chr18:42985327-42984647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
67, 230
               

               
Conread position:
               
63-745
               

               
Cow position:
               
chr18:52012460-52011774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
64-695
               

               
Cow position:
               
chr18:50083432-50084069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
64, 161
               

               
Conread position:
               
64-705
               

               
Cow position:
               
chr18:50059305-50058659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
63, 322
               

               
Conread position:
               
64-745
               

               
Cow position:
               
chr18:43120257-43119570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
63, 253
               

               
Conread position:
               
65-745
               

               
Cow position:
               
chr18:14454037-14453351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
62, 84
               

               
Conread position:
               
66-705
               

               
Cow position:
               
chr18:42675337-42674693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 83
               

               
Conread position:
               
67-757
               

               
Cow position:
               
chr18:53525678-53526374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
53, 10
               

               
Conread position:
               
70-622
               

               
Cow position:
               
chr18:33093118-33092560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
57, 163
               

               
Conread position:
               
81-722
               

               
Cow position:
               
chr18:50059624-50058977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 305
               

               
Conread position:
               
82-736
               

               
Cow position:
               
chr18:55067110-55066450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
55, 120
               

               
Conread position:
               
100-736
               

               
Cow position:
               
chr18:42960281-42959648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
29, 217
               

               
Conread position:
               
100-737
               

               
Cow position:
               
chr18:41949330-41948687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
23, 133
               

               
Conread position:
               
104-704
               

               
Cow position:
               
chr18:53497994-53498600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
111, 104
               

               
Conread position:
               
130-738
               

               
Cow position:
               
chr18:53635657-53635046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 255
               

               
Conread position:
               
132-745
               

               
Cow position:
               
chr18:53636075-53635459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 98
               

               
Conread position:
               
134-411
               

               
Cow position:
               
chr18:56391931-56391654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
89, 94
               

               
Conread position:
               
134-745
               

               
Cow position:
               
chr18:55497651-55497037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 251
               

               
Conread position:
               
140-692
               

               
Cow position:
               
chr18:22844308-22843750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
50, 45
               

               
Conread position:
               
142-661
               

               
Cow position:
               
chr18:43168023-43168545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
48, 43
               

               
Conread position:
               
142-695
               

               
Cow position:
               
chr18:50031003-50030445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
163, 57
               

               
Conread position:
               
142-711
               

               
Cow position:
               
chr18:1417981-1418552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
154, 158
               

               
Conread position:
               
143-745
               

               
Cow position:
               
chr18:56128101-56128706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 86
               

               
Conread position:
               
143-746
               

               
Cow position:
               
chr18:53610487-53609881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 55
               

               
Conread position:
               
144-536
               

               
Cow position:
               
chr18:50083851-50084245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
223, 237
               

               
Conread position:
               
144-585
               

               
Cow position:
               
chr18:44397954-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
158, 168
               

               
Conread position:
               
144-684
               

               
Cow position:
               
chr18:50271610-50272152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
313, 408
               

               
Conread position:
               
144-695
               

               
Cow position:
               
chr18:50246058-50246612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
153, 170
               

               
Conread position:
               
144-704
               

               
Cow position:
               
chr18:50099292-50099855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
149, 162
               

               
Conread position:
               
144-734
               

               
Cow position:
               
chr18:52447425-52448018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 55
               

               
Conread position:
               
144-745
               

               
Cow position:
               
chr18:50245974-50246578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
89, 63
               

               
Conread position:
               
145-459
               

               
Cow position:
               
chr18:56247417-56247107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
145-694
               

               
Cow position:
               
chr18:51368284-51367733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
278, 284
               

               
Conread position:
               
145-737
               

               
Cow position:
               
chr18:44240075-44240670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
339, 505
               

               
Conread position:
               
145-737
               

               
Cow position:
               
chr18:52447678-52448273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
58, 54
               

               
Conread position:
               
145-743
               

               
Cow position:
               
chr18:51789575-51788974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
229, 220
               

               
Conread position:
               
145-745
               

               
Cow position:
               
chr18:49022628-49023231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 553
               

               
Conread position:
               
145-745
               

               
Cow position:
               
chr18:56316115-56316718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 283
               

               
Conread position:
               
149-351
               

               
Cow position:
               
chr18:55442336-55442538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
146, 151
               

               
Conread position:
               
149-722
               

               
Cow position:
               
chr18:40074925-40075501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 62
               

               
Conread position:
               
151-695
               

               
Cow position:
               
chr18:50099467-50100014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
154-745
               

               
Cow position:
               
chr18:50059632-50059038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 152
               

               
Conread position:
               
155-794
               

               
Cow position:
               
chr18:50281752-50282393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 14
               

               
Conread position:
               
157-451
               

               
Cow position:
               
chr18:56267466-56267174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
280, 0
               

               
Conread position:
               
157-684
               

               
Cow position:
               
chr18:53586417-53585887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
299, 407
               

               
Conread position:
               
157-709
               

               
Cow position:
               
chr18:33064860-33064306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
219, 239
               

               
Conread position:
               
157-724
               

               
Cow position:
               
chr18:53509232-53509802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
304, 325
               

               
Conread position:
               
157-737
               

               
Cow position:
               
chr18:53586669-53586086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
221, 229
               

               
Conread position:
               
157-737
               

               
Cow position:
               
chr18:54993234-54993817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 58
               

               
Conread position:
               
157-743
               

               
Cow position:
               
chr18:51752340-51751752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
157-746
               

               
Cow position:
               
chr18:53525686-53526278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
304, 325
               

               
Conread position:
               
157-757
               

               
Cow position:
               
chr18:55067116-55066512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 42
               

               
Conread position:
               
158-767
               

               
Cow position:
               
chr18:56493839-56494453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
66, 72
               

               
Conread position:
               
163-459
               

               
Cow position:
               
chr18:14453204-14452908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
164-745
               

               
Cow position:
               
chr18:53610382-53609798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 0
               

               
Conread position:
               
164-770
               

               
Cow position:
               
chr18:49022313-49022922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
249, 259
               

               
Conread position:
               
166-372
               

               
Cow position:
               
chr18:22843514-22843308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
167-745
               

               
Cow position:
               
chr18:43175268-43174687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 63
               

               
Conread position:
               
171-716
               

               
Cow position:
               
chr18:40075031-40075579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
90, 82
               

               
Conread position:
               
172-672
               

               
Cow position:
               
chr18:50295365-50295868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
289, 379
               

               
Conread position:
               
172-745
               

               
Cow position:
               
chr18:56391590-56391014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 301
               

               
Conread position:
               
178-745
               

               
Cow position:
               
chr18:53587068-53586498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
202, 197
               

               
Conread position:
               
186-744
               

               
Cow position:
               
chr18:56316072-56316633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 500
               

               
Conread position:
               
188-712
               

               
Cow position:
               
chr18:50049114-50048587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
190-737
               

               
Cow position:
               
chr18:44398412-44397862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
266, 291
               

               
Conread position:
               
196-708
               

               
Cow position:
               
chr18:42985527-42985012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
196-734
               

               
Cow position:
               
chr18:22844336-22843792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
100, 108
               

               
Conread position:
               
212-745
               

               
Cow position:
               
chr18:51400245-51400781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
89, 102
               

               
Conread position:
               
218-587
               

               
Cow position:
               
chr18:56267489-56267117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
195, 208
               

               
Conread position:
               
220-705
               

               
Cow position:
               
chr18:50271602-50272089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
238, 422
               

               
Conread position:
               
226-695
               

               
Cow position:
               
chr18:50059644-50059172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
236, 316
               

               
Conread position:
               
227-593
               

               
Cow position:
               
chr18:14453224-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
233, 0
               

               
Conread position:
               
227-732
               

               
Cow position:
               
chr18:56493992-56494500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
250, 0
               

               
Conread position:
               
227-737
               

               
Cow position:
               
chr18:53559738-53560251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 87
               

               
Conread position:
               
227-737
               

               
Cow position:
               
chr18:53559822-53560335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
233, 327
               

               
Conread position:
               
228-680
               

               
Cow position:
               
chr18:42827469-42827924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
221, 290
               

               
Conread position:
               
228-745
               

               
Cow position:
               
chr18:33064873-33064353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
221, 307
               

               
Conread position:
               
228-745
               

               
Cow position:
               
chr18:40306234-40306754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
230, 470
               

               
Conread position:
               
229-707
               

               
Cow position:
               
chr18:40074921-40075402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
209, 197
               

               
Conread position:
               
229-737
               

               
Cow position:
               
chr18:43022837-43022326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
72, 85
               

               
Conread position:
               
229-743
               

               
Cow position:
               
chr18:51812734-51812217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
235, 337
               

               
Conread position:
               
229-745
               

               
Cow position:
               
chr18:42791702-42792221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
235, 0
               

               
Conread position:
               
229-745
               

               
Cow position:
               
chr18:50083432-50083951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
76, 69
               

               
Conread position:
               
229-745
               

               
Cow position:
               
chr18:50848401-50848920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
229-746
               

               
Cow position:
               
chr18:43120257-43119737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
248, 421
               

               
Conread position:
               
229-760
               

               
Cow position:
               
chr18:42837786-42837252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
73, 85
               

               
Conread position:
               
231-717
               

               
Cow position:
               
chr18:49033398-49032909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
224, 245
               

               
Conread position:
               
232-723
               

               
Cow position:
               
chr18:42985575-42985081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 82
               

               
Conread position:
               
232-737
               

               
Cow position:
               
chr18:42960314-42959806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 79
               

               
Conread position:
               
232-745
               

               
Cow position:
               
chr18:42675336-42674820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
63, 82
               

               
Conread position:
               
233-717
               

               
Cow position:
               
chr18:1417988-1418475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
188, 180
               

               
Conread position:
               
234-593
               

               
Cow position:
               
chr18:43048741-43048379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 58
               

               
Conread position:
               
235-723
               

               
Cow position:
               
chr18:33093118-33092627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
140, 152
               

               
Conread position:
               
240-705
               

               
Cow position:
               
chr18:51765417-51764949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 86
               

               
Conread position:
               
240-723
               

               
Cow position:
               
chr18:52447017-52447503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
241-746
               

               
Cow position:
               
chr18:53610473-53609965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 457
               

               
Conread position:
               
241-748
               

               
Cow position:
               
chr18:42791042-42791552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
242-745
               

               
Cow position:
               
chr18:33064943-33064437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
221, 313
               

               
Conread position:
               
250-695
               

               
Cow position:
               
chr18:42827407-42827855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
258-745
               

               
Cow position:
               
chr18:55497695-55497205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
259-737
               

               
Cow position:
               
chr18:53559686-53560167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
175, 165
               

               
Conread position:
               
264-768
               

               
Cow position:
               
chr18:42724821-42724314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
157, 13
               

               
Conread position:
               
270-745
               

               
Cow position:
               
chr18:49021674-49022153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
208, 296
               

               
Conread position:
               
273-576
               

               
Cow position:
               
chr18:56391960-56391654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
140, 146
               

               
Conread position:
               
274-737
               

               
Cow position:
               
chr18:40324857-40324391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
182, 429
               

               
Conread position:
               
274-745
               

               
Cow position:
               
chr18:42837909-42837435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
275-746
               

               
Cow position:
               
chr18:56267600-56267126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
64, 59
               

               
Conread position:
               
308-745
               

               
Cow position:
               
chr18:49033405-49032965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
311-737
               

               
Cow position:
               
chr18:42985580-42985151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
145, 162
               

               
Conread position:
               
312-759
               

               
Cow position:
               
chr18:50295253-50295705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 117
               

               
Conread position:
               
317-745
               

               
Cow position:
               
chr18:1417988-1418419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
95, 123
               

               
Conread position:
               
318-736
               

               
Cow position:
               
chr18:43048741-43048320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
336-745
               

               
Cow position:
               
chr18:33093101-33092689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
138, 126
               

               
Conread position:
               
376-771
               

               
Cow position:
               
chr18:51812755-51812355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 73
               

               
Conread position:
               
387-745
               

               
Cow position:
               
chr18:40306225-40306586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 334
               

               
Conread position:
               
391-745
               

               
Cow position:
               
chr18:42675345-42674988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
87, 144
               

               
Conread position:
               
393-746
               

               
Cow position:
               
chr18:53636066-53635710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
397-739
               

               
Cow position:
               
chr18:40074921-40075266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
63, 192
               

               
Conread position:
               
397-745
               

               
Cow position:
               
chr18:50281740-50282091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
73, 61
               

               
Conread position:
               
397-746
               

               
Cow position:
               
chr18:56128103-56128455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 289
               

               
Conread position:
               
433-743
               

               
Cow position:
               
chr18:41949330-41949017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 133
               

               
Conread position:
               
471-745
               

               
Cow position:
               
chr18:40074914-40075188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 70
               

               
Conread position:
               
471-745
               

               
Cow position:
               
chr18:56248182-56247910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
472-745
               

               
Cow position:
               
chr18:50059647-50059374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
232, 223
               

               
Conread position:
               
478-683
               

               
Cow position:
               
chr18:55442332-55442537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
490-745
               

               
Cow position:
               
chr18:53509232-53509487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-592
               

               
Cow position:
               
chr19:23597116-23597713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
1-696
               

               
Cow position:
               
chr19:23649557-23650258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 146
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr19:23613435-23614177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
128, 699
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr19:23649305-23650053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 89
               

               
Conread position:
               
1-744
               

               
Cow position:
               
chr19:14940327-14941076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr19:14940159-14940909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 561
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr19:14940243-14940993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr19:20677870-20678620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
124, 533
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr19:23596951-23597698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 79
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr19:23613771-23614521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
136, 115
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr19:23649473-23650223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 134
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr19:23649641-23650391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 148
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr19:23649725-23650475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 231
               

               
Conread position:
               
2-673
               

               
Cow position:
               
chr19:14960387-14959714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
117, 229
               

               
Conread position:
               
3-659
               

               
Cow position:
               
chr19:23614445-23615107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
122, 297
               

               
Conread position:
               
23-672
               

               
Cow position:
               
chr19:23649831-23650486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 292
               

               
Conread position:
               
25-745
               

               
Cow position:
               
chr19:14940015-14940741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
29-726
               

               
Cow position:
               
chr19:14959539-14958852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
35-707
               

               
Cow position:
               
chr19:14960438-14959764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 289
               

               
Conread position:
               
37-380
               

               
Cow position:
               
chr19:14948344-14947998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
64-723
               

               
Cow position:
               
chr19:23614170-23614835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
62, 572
               

               
Conread position:
               
64-746
               

               
Cow position:
               
chr19:20677597-20678285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
63, 243
               

               
Conread position:
               
64-756
               

               
Cow position:
               
chr19:23614422-23615121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 138
               

               
Conread position:
               
72-592
               

               
Cow position:
               
chr19:20635560-20635033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 132
               

               
Conread position:
               
83-613
               

               
Cow position:
               
chr19:20678120-20678656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 347
               

               
Conread position:
               
155-671
               

               
Cow position:
               
chr19:20635557-20635038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
255, 246
               

               
Conread position:
               
163-744
               

               
Cow position:
               
chr19:23649302-23649886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 133
               

               
Conread position:
               
190-485
               

               
Cow position:
               
chr19:14948356-14948058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
111, 124
               

               
Conread position:
               
190-737
               

               
Cow position:
               
chr19:14960448-14959900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 234
               

               
Conread position:
               
227-734
               

               
Cow position:
               
chr19:43570244-43569734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
233, 243
               

               
Conread position:
               
229-629
               

               
Cow position:
               
chr19:14948401-14947998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
184, 190
               

               
Conread position:
               
229-745
               

               
Cow position:
               
chr19:23596930-23597446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 102
               

               
Conread position:
               
237-708
               

               
Cow position:
               
chr19:20635644-20635169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 299
               

               
Conread position:
               
242-753
               

               
Cow position:
               
chr19:23649297-23649813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 237
               

               
Conread position:
               
280-743
               

               
Cow position:
               
chr19:23613381-23613847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
182, 190
               

               
Conread position:
               
370-745
               

               
Cow position:
               
chr19:14960352-14959976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
376-665
               

               
Cow position:
               
chr19:14959119-14958827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
381-737
               

               
Cow position:
               
chr19:14948416-14948058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
400-745
               

               
Cow position:
               
chr19:23596849-23597194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr2:5874509-5874108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr2:82799947-82800368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
1-626
               

               
Cow position:
               
chr2:5874761-5874130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
127, 421
               

               
Conread position:
               
1-671
               

               
Cow position:
               
chr2:86465519-86466195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr2:82799611-82800353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
1-739
               

               
Cow position:
               
chr2:5875097-5874353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
23-743
               

               
Cow position:
               
chr2:5874907-5874181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 123
               

               
Conread position:
               
25-696
               

               
Cow position:
               
chr2:86465039-86465716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
25-745
               

               
Cow position:
               
chr2:82799551-82800277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 76
               

               
Conread position:
               
36-745
               

               
Cow position:
               
chr2:5875146-5874431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 169
               

               
Conread position:
               
36-745
               

               
Cow position:
               
chr2:82799478-82800193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 271
               

               
Conread position:
               
144-340
               

               
Cow position:
               
chr2:86466003-86466197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
144-695
               

               
Cow position:
               
chr2:78754895-78755448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
154-731
               

               
Cow position:
               
chr2:5874689-5874109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 234
               

               
Conread position:
               
157-526
               

               
Cow position:
               
chr2:48689465-48689094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
319, 53
               

               
Conread position:
               
162-713
               

               
Cow position:
               
chr2:48689625-48689075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
299, 52
               

               
Conread position:
               
178-745
               

               
Cow position:
               
chr2:5875169-5874599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 353
               

               
Conread position:
               
190-745
               

               
Cow position:
               
chr2:82799467-82800025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 184
               

               
Conread position:
               
241-743
               

               
Cow position:
               
chr2:78754824-78755329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
124, 129
               

               
Conread position:
               
251-734
               

               
Cow position:
               
chr2:5875180-5874694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 175
               

               
Conread position:
               
478-746
               

               
Cow position:
               
chr2:82799506-82799774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr21:34222883-34222543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
95, 99
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr21:12608425-12608002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr21:34223051-34222603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
95, 100
               

               
Conread position:
               
1-713
               

               
Cow position:
               
chr21:12659337-12660055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 394
               

               
Conread position:
               
1-744
               

               
Cow position:
               
chr21:12659253-12660002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 475
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr21:12608761-12608011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 394
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr21:12658917-12659667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr21:12659001-12659751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr21:12659169-12659919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 395
               

               
Conread position:
               
16-745
               

               
Cow position:
               
chr21:12608914-12608179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 118
               

               
Conread position:
               
23-744
               

               
Cow position:
               
chr21:12608823-12608096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
53-777
               

               
Cow position:
               
chr21:12608625-12607898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 342
               

               
Conread position:
               
55-744
               

               
Cow position:
               
chr21:12658803-12659498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 154
               

               
Conread position:
               
99-745
               

               
Cow position:
               
chr21:12608915-12608263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
178-762
               

               
Cow position:
               
chr21:12608917-12608329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 0
               

               
Conread position:
               
181-673
               

               
Cow position:
               
chr21:34223036-34222541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 477
               

               
Conread position:
               
313-745
               

               
Cow position:
               
chr21:34223153-34222721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
148, 80
               

               
Conread position:
               
385-745
               

               
Cow position:
               
chr21:12658800-12659163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 8
               

               
Conread position:
               
514-768
               

               
Cow position:
               
chr21:34223036-34222780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
146, 136
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:12418858-12418432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
95, 100
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr22:11640859-11641458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1-609
               

               
Cow position:
               
chr22:12475884-12475268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 232
               

               
Conread position:
               
1-672
               

               
Cow position:
               
chr22:46654182-46654860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
1-695
               

               
Cow position:
               
chr22:14429815-14430515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
95, 100
               

               
Conread position:
               
1-716
               

               
Cow position:
               
chr22:12476052-12475331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
142, 127
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr22:12458523-12457781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
128, 537
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr22:12399591-12398841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 218
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr22:12476304-12475554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr22:12499207-12499957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
142, 127
               

               
Conread position:
               
1-746
               

               
Cow position:
               
chr22:12431739-12430988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
142, 115
               

               
Conread position:
               
2-671
               

               
Cow position:
               
chr22:12499292-12499967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
126, 536
               

               
Conread position:
               
2-717
               

               
Cow position:
               
chr22:11640692-11641413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
2-745
               

               
Cow position:
               
chr22:12419294-12418528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 215
               

               
Conread position:
               
2-745
               

               
Cow position:
               
chr22:12458606-12457857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 458
               

               
Conread position:
               
3-712
               

               
Cow position:
               
chr22:12399757-12399042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
124, 383
               

               
Conread position:
               
16-586
               

               
Cow position:
               
chr22:12419011-12418435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 415
               

               
Conread position:
               
23-745
               

               
Cow position:
               
chr22:12432389-12431661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
105, 511
               

               
Conread position:
               
25-507
               

               
Cow position:
               
chr22:11666472-11666960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
101, 366
               

               
Conread position:
               
25-588
               

               
Cow position:
               
chr22:11701126-11701695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 371
               

               
Conread position:
               
28-738
               

               
Cow position:
               
chr22:12385640-12384922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
102, 174
               

               
Conread position:
               
36-758
               

               
Cow position:
               
chr22:12399886-12399163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
37-748
               

               
Cow position:
               
chr22:12431871-12431154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
38-694
               

               
Cow position:
               
chr22:14467928-14468591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 165
               

               
Conread position:
               
45-695
               

               
Cow position:
               
chr22:12476344-12475688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 188
               

               
Conread position:
               
48-734
               

               
Cow position:
               
chr22:12399460-12398768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
84, 437
               

               
Conread position:
               
52-745
               

               
Cow position:
               
chr22:12431520-12430821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
92, 181
               

               
Conread position:
               
54-705
               

               
Cow position:
               
chr22:14429784-14430440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
75, 148
               

               
Conread position:
               
64-723
               

               
Cow position:
               
chr22:12476409-12475744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
93-671
               

               
Cow position:
               
chr22:11701110-11701694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
34, 109
               

               
Conread position:
               
100-769
               

               
Cow position:
               
chr22:14429662-14430339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
29, 458
               

               
Conread position:
               
128-754
               

               
Cow position:
               
chr22:12432449-12431818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 95
               

               
Conread position:
               
142-760
               

               
Cow position:
               
chr22:46654074-46654697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
155, 150
               

               
Conread position:
               
143-723
               

               
Cow position:
               
chr22:12498932-12499515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
265, 285
               

               
Conread position:
               
145-745
               

               
Cow position:
               
chr22:11640670-11641273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 0
               

               
Conread position:
               
145-746
               

               
Cow position:
               
chr22:12385604-12384998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
163-746
               

               
Cow position:
               
chr22:12419298-12418695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
210, 484
               

               
Conread position:
               
181-670
               

               
Cow position:
               
chr22:11666463-11666955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
299, 268
               

               
Conread position:
               
181-705
               

               
Cow position:
               
chr22:11701117-11701643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
110, 118
               

               
Conread position:
               
185-744
               

               
Cow position:
               
chr22:12419007-12418445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 208
               

               
Conread position:
               
189-745
               

               
Cow position:
               
chr22:11640630-11641189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 118
               

               
Conread position:
               
213-705
               

               
Cow position:
               
chr22:12498834-12499328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
200, 215
               

               
Conread position:
               
252-712
               

               
Cow position:
               
chr22:11701104-11701567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
146, 141
               

               
Conread position:
               
330-745
               

               
Cow position:
               
chr22:11701098-11701516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
83, 97
               

               
Conread position:
               
331-718
               

               
Cow position:
               
chr22:11666445-11666836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
82, 96
               

               
Conread position:
               
378-734
               

               
Cow position:
               
chr22:12498915-12499274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 45
               

               
Conread position:
               
473-743
               

               
Cow position:
               
chr22:12498929-12499199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
234, 221
               

               
Conread position:
               
473-746
               

               
Cow position:
               
chr22:12476330-12476057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
186, 181
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr23:24626393-24626723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
115, 232
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr23:25660320-25660732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
71, 66
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr23:24639637-24640060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
122, 354
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr23:24639553-24640004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr23:25626616-25627071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 100
               

               
Conread position:
               
1-568
               

               
Cow position:
               
chr23:24547245-24546672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 201
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr23:24639217-24639967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 183
               

               
Conread position:
               
2-385
               

               
Cow position:
               
chr23:24535791-24535404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
10-587
               

               
Cow position:
               
chr23:24560712-24560129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
86, 90
               

               
Conread position:
               
16-746
               

               
Cow position:
               
chr23:24560874-24560138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 84
               

               
Conread position:
               
25-410
               

               
Cow position:
               
chr23:24535852-24535464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
106, 348
               

               
Conread position:
               
25-449
               

               
Cow position:
               
chr23:25626559-25626983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
103, 28
               

               
Conread position:
               
37-441
               

               
Cow position:
               
chr23:24626345-24626750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
86, 164
               

               
Conread position:
               
37-745
               

               
Cow position:
               
chr23:24639337-24640051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 43
               

               
Conread position:
               
43-411
               

               
Cow position:
               
chr23:25724084-25723713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
55-745
               

               
Cow position:
               
chr23:25626169-25626862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 267
               

               
Conread position:
               
63-691
               

               
Cow position:
               
chr23:24639447-24640081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 139
               

               
Conread position:
               
64-577
               

               
Cow position:
               
chr23:25626514-25627030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
32, 36
               

               
Conread position:
               
64-722
               

               
Cow position:
               
chr23:25626094-25626755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 65
               

               
Conread position:
               
84-653
               

               
Cow position:
               
chr23:25698658-25698081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 235
               

               
Conread position:
               
85-746
               

               
Cow position:
               
chr23:24639217-24639884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 232
               

               
Conread position:
               
143-772
               

               
Cow position:
               
chr23:24547268-24546632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 555
               

               
Conread position:
               
148-705
               

               
Cow position:
               
chr23:25660133-25660693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 253
               

               
Conread position:
               
157-492
               

               
Cow position:
               
chr23:25724051-25723713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
254, 266
               

               
Conread position:
               
163-587
               

               
Cow position:
               
chr23:24626306-24626733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
165-745
               

               
Cow position:
               
chr23:24522815-24522237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
298, 28
               

               
Conread position:
               
220-732
               

               
Cow position:
               
chr23:24522678-24522166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
214, 68
               

               
Conread position:
               
229-588
               

               
Cow position:
               
chr23:24535813-24535451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
233, 302
               

               
Conread position:
               
229-745
               

               
Cow position:
               
chr23:25626514-25627030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
235, 73
               

               
Conread position:
               
243-675
               

               
Cow position:
               
chr23:24626302-24626736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
234, 323
               

               
Conread position:
               
274-671
               

               
Cow position:
               
chr23:24535852-24535452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
274-745
               

               
Cow position:
               
chr23:24536020-24535546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
292-767
               

               
Cow position:
               
chr23:24547287-24546807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
172, 243
               

               
Conread position:
               
327-745
               

               
Cow position:
               
chr23:24626302-24626723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 204
               

               
Conread position:
               
370-678
               

               
Cow position:
               
chr23:24654070-24654381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
376-769
               

               
Cow position:
               
chr23:25724084-25723686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
377-745
               

               
Cow position:
               
chr23:24626268-24626639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
397-735
               

               
Cow position:
               
chr23:25626094-25626435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
415-739
               

               
Cow position:
               
chr23:25660149-25660476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
482-745
               

               
Cow position:
               
chr23:25660134-25660398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
9, 213
               

               
Conread position:
               
513-746
               

               
Cow position:
               
chr23:25698641-25698408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
523-745
               

               
Cow position:
               
chr23:25724102-25723880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr24:17077841-17077543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr24:17035370-17034958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
127, 316
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr24:17070627-17071045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
100, 92
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr24:17070543-17070999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
133, 200
               

               
Conread position:
               
1-723
               

               
Cow position:
               
chr24:17035706-17034978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 430
               

               
Conread position:
               
1-723
               

               
Cow position:
               
chr24:17036462-17035734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 425
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr24:17078345-17077597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 533
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr24:17035790-17035040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
129, 367
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr24:17036378-17035628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 100
               

               
Conread position:
               
1-757
               

               
Cow position:
               
chr24:17035874-17035111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
25-598
               

               
Cow position:
               
chr24:17070483-17071062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
25-664
               

               
Cow position:
               
chr24:17078153-17077508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 177
               

               
Conread position:
               
37-745
               

               
Cow position:
               
chr24:17036006-17035292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 575
               

               
Conread position:
               
83-419
               

               
Cow position:
               
chr24:17013162-17013501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 119
               

               
Conread position:
               
100-745
               

               
Cow position:
               
chr24:17036612-17035964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
144-746
               

               
Cow position:
               
chr24:17078283-17077678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 290
               

               
Conread position:
               
212-745
               

               
Cow position:
               
chr24:17070505-17071041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
249, 261
               

               
Conread position:
               
247-745
               

               
Cow position:
               
chr24:17070456-17070957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 287
               

               
Conread position:
               
248-745
               

               
Cow position:
               
chr24:17036548-17036048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 0
               

               
Conread position:
               
433-745
               

               
Cow position:
               
chr24:17013179-17013494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr25:4657297-4657038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
113, 95
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr25:22235913-22236298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 313
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr25:24385164-24384764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr25:3636394-3635981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
135, 397
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr25:3675992-3676405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
133, 395
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr25:25652944-25653360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 382
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr25:36801543-36801966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr25:33299403-33299829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
122, 217
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr25:23420383-23420839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
129, 314
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr25:34769704-34769243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr25:36800799-36801335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
122, 380
               

               
Conread position:
               
1-577
               

               
Cow position:
               
chr25:33144849-33145428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
104, 92
               

               
Conread position:
               
1-583
               

               
Cow position:
               
chr25:3664015-3664603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 148
               

               
Conread position:
               
1-590
               

               
Cow position:
               
chr25:33157389-33156794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1-621
               

               
Cow position:
               
chr25:25652692-25653318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 148
               

               
Conread position:
               
1-667
               

               
Cow position:
               
chr25:33530145-33530817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 484
               

               
Conread position:
               
1-673
               

               
Cow position:
               
chr25:326581-327265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1-680
               

               
Cow position:
               
chr25:34732524-34731838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
130, 351
               

               
Conread position:
               
1-682
               

               
Cow position:
               
chr25:34769956-34769269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 148
               

               
Conread position:
               
1-696
               

               
Cow position:
               
chr25:25652608-25653309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-722
               

               
Cow position:
               
chr25:25652524-25653251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 387
               

               
Conread position:
               
1-722
               

               
Cow position:
               
chr25:33298731-33299458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr25:34770040-34769292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 130
               

               
Conread position:
               
1-744
               

               
Cow position:
               
chr25:33530061-33530810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 425
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr25:25652188-25652938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 232
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr25:25652440-25653190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 148
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr25:34447106-34447847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
122, 600
               

               
Conread position:
               
1-746
               

               
Cow position:
               
chr25:33299067-33299818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 724
               

               
Conread position:
               
1-746
               

               
Cow position:
               
chr25:36801219-36801958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
312, 94
               

               
Conread position:
               
1-974
               

               
Cow position:
               
chr25:34762997-34763976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
983
               

               
Alignm identity:
               
762
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
794, 850
               

               
Conread position:
               
2-667
               

               
Cow position:
               
chr25:3663932-3664602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 147
               

               
Conread position:
               
2-745
               

               
Cow position:
               
chr25:326330-327085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 182
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr25:4657463-4657041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
128, 408
               

               
Conread position:
               
3-598
               

               
Cow position:
               
chr25:34473509-34474106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 294
               

               
Conread position:
               
7-744
               

               
Cow position:
               
chr25:36800973-36801704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
118, 339
               

               
Conread position:
               
14-342
               

               
Cow position:
               
chr25:4657370-4657037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
16-745
               

               
Cow position:
               
chr25:326512-327253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 84
               

               
Conread position:
               
23-696
               

               
Cow position:
               
chr25:36800653-36801332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
100, 278
               

               
Conread position:
               
23-745
               

               
Cow position:
               
chr25:34770102-34769374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 126
               

               
Conread position:
               
24-446
               

               
Cow position:
               
chr25:3636455-3636030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
96, 72
               

               
Conread position:
               
25-338
               

               
Cow position:
               
chr25:34733985-34733669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
100, 124
               

               
Conread position:
               
25-414
               

               
Cow position:
               
chr25:346472-346864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 133
               

               
Conread position:
               
25-454
               

               
Cow position:
               
chr25:23420323-23420755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 113
               

               
Conread position:
               
25-744
               

               
Cow position:
               
chr25:33298587-33299312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 197
               

               
Conread position:
               
29-745
               

               
Cow position:
               
chr25:33157529-33156807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
35-585
               

               
Cow position:
               
chr25:33127668-33128224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
37-748
               

               
Cow position:
               
chr25:34446974-34447691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 393
               

               
Conread position:
               
45-676
               

               
Cow position:
               
chr25:33157430-33156792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
48-335
               

               
Cow position:
               
chr25:427293-427582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
49-760
               

               
Cow position:
               
chr25:33298527-33299246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 268
               

               
Conread position:
               
66-745
               

               
Cow position:
               
chr25:34762810-34763489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 68
               

               
Conread position:
               
70-661
               

               
Cow position:
               
chr25:24399002-24398408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
74-720
               

               
Cow position:
               
chr25:34732617-34731967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
76-745
               

               
Cow position:
               
chr25:326488-327169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
96-434
               

               
Cow position:
               
chr25:4657454-4657113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
129-745
               

               
Cow position:
               
chr25:3663978-3664597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 262
               

               
Conread position:
               
130-537
               

               
Cow position:
               
chr25:33529062-33529472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
165, 174
               

               
Conread position:
               
132-733
               

               
Cow position:
               
chr25:24385367-24384762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 169
               

               
Conread position:
               
134-449
               

               
Cow position:
               
chr25:33506800-33507115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
138-745
               

               
Cow position:
               
chr25:33530117-33530727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
166, 152
               

               
Conread position:
               
144-759
               

               
Cow position:
               
chr25:36800693-36801313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 170
               

               
Conread position:
               
145-716
               

               
Cow position:
               
chr25:22235727-22236298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
311, 69
               

               
Conread position:
               
150-421
               

               
Cow position:
               
chr25:34733941-34733670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
60, 69
               

               
Conread position:
               
154-454
               

               
Cow position:
               
chr25:34734022-34733721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
157-505
               

               
Cow position:
               
chr25:36844545-36844203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
53, 58
               

               
Conread position:
               
157-563
               

               
Cow position:
               
chr25:22235904-22236313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
319, 374
               

               
Conread position:
               
157-638
               

               
Cow position:
               
chr25:3636487-3636003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
299, 0
               

               
Conread position:
               
161-722
               

               
Cow position:
               
chr25:33530056-33530620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
287, 321
               

               
Conread position:
               
162-704
               

               
Cow position:
               
chr25:33144845-33145387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 191
               

               
Conread position:
               
162-747
               

               
Cow position:
               
chr25:3663927-3664515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 564
               

               
Conread position:
               
163-596
               

               
Cow position:
               
chr25:36844623-36844196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
275, 0
               

               
Conread position:
               
163-733
               

               
Cow position:
               
chr25:24398990-24398420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 181
               

               
Conread position:
               
164-537
               

               
Cow position:
               
chr25:33506746-33507122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
294, 0
               

               
Conread position:
               
166-569
               

               
Cow position:
               
chr25:3675992-3676398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
289, 0
               

               
Conread position:
               
168-743
               

               
Cow position:
               
chr25:34473509-34474084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
170-744
               

               
Cow position:
               
chr25:3636558-3635981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 0
               

               
Conread position:
               
173-734
               

               
Cow position:
               
chr25:23267570-23267016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
178-744
               

               
Cow position:
               
chr25:24399215-24398661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
180-625
               

               
Cow position:
               
chr25:33529028-33529476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
216, 211
               

               
Conread position:
               
180-745
               

               
Cow position:
               
chr25:34770110-34769542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
181-744
               

               
Cow position:
               
chr25:34762844-34763407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
189-669
               

               
Cow position:
               
chr25:23267473-23266997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
275, 188
               

               
Conread position:
               
226-745
               

               
Cow position:
               
chr25:34770148-34769626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 0
               

               
Conread position:
               
229-660
               

               
Cow position:
               
chr25:22235892-22236326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
219, 238
               

               
Conread position:
               
229-672
               

               
Cow position:
               
chr25:34732629-34732183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
234, 392
               

               
Conread position:
               
238-587
               

               
Cow position:
               
chr25:34734022-34733669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
238-716
               

               
Cow position:
               
chr25:33144836-33145315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
13, 202
               

               
Conread position:
               
252-674
               

               
Cow position:
               
chr25:4657463-4657038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 54
               

               
Conread position:
               
252-745
               

               
Cow position:
               
chr25:34473509-34474002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 168
               

               
Conread position:
               
255-745
               

               
Cow position:
               
chr25:3636557-3636064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
143, 137
               

               
Conread position:
               
264-695
               

               
Cow position:
               
chr25:33529028-33529462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
209, 194
               

               
Conread position:
               
265-626
               

               
Cow position:
               
chr25:33506763-33507127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
193, 215
               

               
Conread position:
               
274-723
               

               
Cow position:
               
chr25:23420323-23420775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
200, 187
               

               
Conread position:
               
285-745
               

               
Cow position:
               
chr25:33127669-33128132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
180, 412
               

               
Conread position:
               
330-745
               

               
Cow position:
               
chr25:25652184-25652602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 236
               

               
Conread position:
               
333-737
               

               
Cow position:
               
chr25:3675991-3676398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
90, 96
               

               
Conread position:
               
339-698
               

               
Cow position:
               
chr25:33506753-33507115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
119, 226
               

               
Conread position:
               
349-723
               

               
Cow position:
               
chr25:414759-414391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
358-745
               

               
Cow position:
               
chr25:23420323-23420713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
405-745
               

               
Cow position:
               
chr25:22235816-22236159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 319
               

               
Conread position:
               
407-762
               

               
Cow position:
               
chr25:34732617-34732259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
408-744
               

               
Cow position:
               
chr25:34734020-34733680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
8, 52
               

               
Conread position:
               
415-678
               

               
Cow position:
               
chr25:36844623-36844357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 43
               

               
Conread position:
               
421-745
               

               
Cow position:
               
chr25:4657461-4657135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
40, 7
               

               
Conread position:
               
427-660
               

               
Cow position:
               
chr25:427338-427574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
439-745
               

               
Cow position:
               
chr25:346469-346778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
473-744
               

               
Cow position:
               
chr25:34762802-34763074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
478-744
               

               
Cow position:
               
chr25:33506811-33507077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
129, 124
               

               
Conread position:
               
478-745
               

               
Cow position:
               
chr25:33529077-33529344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
487-746
               

               
Cow position:
               
chr25:34734022-34733762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
501-745
               

               
Cow position:
               
chr25:4657463-4657219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
241-745
               

               
Cow position:
               
chr27:21615948-21615442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
131, 127
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr28:33210396-33210657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 99
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr28:7757836-7758292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
120, 421
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr28:9253103-9253613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
130, 421
               

               
Conread position:
               
1-661
               

               
Cow position:
               
chr28:34695912-34696578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 74
               

               
Conread position:
               
1-727
               

               
Cow position:
               
chr28:7758088-7758804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
61, 57
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr28:7757416-7758164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 201
               

               
Conread position:
               
1-762
               

               
Cow position:
               
chr28:11334137-11333374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
771
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 79
               

               
Conread position:
               
16-587
               

               
Cow position:
               
chr28:9253034-9253611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
36-760
               

               
Cow position:
               
chr28:34695863-34696592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 125
               

               
Conread position:
               
37-745
               

               
Cow position:
               
chr28:7757368-7758082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 392
               

               
Conread position:
               
43-661
               

               
Cow position:
               
chr28:7757710-7758334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 593
               

               
Conread position:
               
144-446
               

               
Cow position:
               
chr28:33210290-33210593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
269, 0
               

               
Conread position:
               
144-745
               

               
Cow position:
               
chr28:7810326-7810921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
269, 215
               

               
Conread position:
               
156-745
               

               
Cow position:
               
chr28:9252924-9253517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
173-748
               

               
Cow position:
               
chr28:9253026-9253604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
132, 126
               

               
Conread position:
               
189-770
               

               
Cow position:
               
chr28:34695851-34696437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 137
               

               
Conread position:
               
190-591
               

               
Cow position:
               
chr28:33210252-33210657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
31, 26
               

               
Conread position:
               
218-737
               

               
Cow position:
               
chr28:9298620-9299137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 47
               

               
Conread position:
               
218-745
               

               
Cow position:
               
chr28:9290056-9290580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
229-626
               

               
Cow position:
               
chr28:9290233-9290629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
280-674
               

               
Cow position:
               
chr28:33210258-33210656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
317-745
               

               
Cow position:
               
chr28:11334154-11333723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
102, 95
               

               
Conread position:
               
368-722
               

               
Cow position:
               
chr28:33210262-33210620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
477-745
               

               
Cow position:
               
chr28:33210290-33210558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
202, 206
               

               
Conread position:
               
514-745
               

               
Cow position:
               
chr28:33210243-33210474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 35
               

               
Conread position:
               
523-745
               

               
Cow position:
               
chr28:7810288-7810510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr3:20194890-20195315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr3:20194806-20195254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 431
               

               
Conread position:
               
69-756
               

               
Cow position:
               
chr3:68045669-68046362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
65, 360
               

               
Conread position:
               
122-340
               

               
Cow position:
               
chr3:20194486-20194703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
129-624
               

               
Cow position:
               
chr3:20194769-20195267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 0
               

               
Conread position:
               
166-389
               

               
Cow position:
               
chr3:20194446-20194669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
170-704
               

               
Cow position:
               
chr3:20194726-20195263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
190-723
               

               
Cow position:
               
chr3:68045625-68046161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
294, 0
               

               
Conread position:
               
214-760
               

               
Cow position:
               
chr3:62722277-62721726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
242, 350
               

               
Conread position:
               
255-745
               

               
Cow position:
               
chr3:20194727-20195220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 0
               

               
Conread position:
               
478-660
               

               
Cow position:
               
chr3:20194509-20194691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
135, 141
               

               
Conread position:
               
503-744
               

               
Cow position:
               
chr3:20194726-20194967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr4:65261552-65261178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
115, 308
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr4:65350297-65350708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 62
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr4:65703667-65703231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
4-585
               

               
Cow position:
               
chr4:65495022-65494429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
126, 233
               

               
Conread position:
               
7-454
               

               
Cow position:
               
chr4:65121623-65122073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
109, 154
               

               
Conread position:
               
139-744
               

               
Cow position:
               
chr4:65350103-65350707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
337, 6
               

               
Conread position:
               
149-377
               

               
Cow position:
               
chr4:65146487-65146715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 67
               

               
Conread position:
               
163-411
               

               
Cow position:
               
chr4:65146417-65146665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
166-624
               

               
Cow position:
               
chr4:65261636-65261175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 54
               

               
Conread position:
               
166-704
               

               
Cow position:
               
chr4:65261723-65261179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
249-738
               

               
Cow position:
               
chr4:65703668-65703176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
209, 306
               

               
Conread position:
               
265-745
               

               
Cow position:
               
chr4:65121548-65122031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
36, 31
               

               
Conread position:
               
330-745
               

               
Cow position:
               
chr4:65495029-65494605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
133, 398
               

               
Conread position:
               
334-745
               

               
Cow position:
               
chr4:65703667-65703253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
46, 54
               

               
Conread position:
               
415-704
               

               
Cow position:
               
chr4:65146417-65146709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 225
               

               
Conread position:
               
496-744
               

               
Cow position:
               
chr4:65146417-65146665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
212-660
               

               
Cow position:
               
chr5:25884664-25884225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 81
               

               
Conread position:
               
1-672
               

               
Cow position:
               
chr6:49396293-49396970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 225
               

               
Conread position:
               
1-724
               

               
Cow position:
               
chr6:49428480-49429209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
1-727
               

               
Cow position:
               
chr6:49428816-49429546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 400
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr6:49340488-49341236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 471
               

               
Conread position:
               
1-744
               

               
Cow position:
               
chr6:49428732-49429481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 399
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr6:49340404-49341154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr6:49428312-49429062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 160
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr6:49428396-49429146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-771
               

               
Cow position:
               
chr6:49428648-49429426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 400
               

               
Conread position:
               
3-440
               

               
Cow position:
               
chr6:49396547-49396987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
125, 217
               

               
Conread position:
               
23-734
               

               
Cow position:
               
chr6:49428250-49428967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
24-746
               

               
Cow position:
               
chr6:49396232-49396960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 202
               

               
Conread position:
               
37-599
               

               
Cow position:
               
chr6:49340860-49341428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
90, 501
               

               
Conread position:
               
157-623
               

               
Cow position:
               
chr6:49362330-49362787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 61
               

               
Conread position:
               
163-694
               

               
Cow position:
               
chr6:49362096-49362618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
132, 151
               

               
Conread position:
               
163-707
               

               
Cow position:
               
chr6:49428224-49428772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
185-768
               

               
Cow position:
               
chr6:49396150-49396732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
189-717
               

               
Cow position:
               
chr6:49362038-49362557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 34
               

               
Conread position:
               
212-733
               

               
Cow position:
               
chr6:49428190-49428714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
291-737
               

               
Cow position:
               
chr6:49340361-49340810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
478-745
               

               
Cow position:
               
chr6:49428291-49428558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
501-745
               

               
Cow position:
               
chr6:49428230-49428474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
191, 184
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr7:28846675-28847058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr7:18390414-18390805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr7:28846591-28847013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
92, 100
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr7:11601103-11600505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 42
               

               
Conread position:
               
1-636
               

               
Cow position:
               
chr7:18390162-18390804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
1-648
               

               
Cow position:
               
chr7:12293348-12294001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
127, 159
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr7:1014771-1015495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr7:3180033-3180781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
1-746
               

               
Cow position:
               
chr7:42879024-42878273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
124, 295
               

               
Conread position:
               
2-723
               

               
Cow position:
               
chr7:1014688-1015415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
126, 196
               

               
Conread position:
               
4-739
               

               
Cow position:
               
chr7:42879189-42878448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
127, 303
               

               
Conread position:
               
25-743
               

               
Cow position:
               
chr7:3179721-3180445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
98, 142
               

               
Conread position:
               
36-695
               

               
Cow position:
               
chr7:11601152-11600487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
60, 65
               

               
Conread position:
               
64-696
               

               
Cow position:
               
chr7:8277659-8278297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 162
               

               
Conread position:
               
66-737
               

               
Cow position:
               
chr7:1014668-1015345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 135
               

               
Conread position:
               
70-457
               

               
Cow position:
               
chr7:3180438-3180826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
60, 78
               

               
Conread position:
               
93-716
               

               
Cow position:
               
chr7:12293272-12293901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
144-694
               

               
Cow position:
               
chr7:1014335-1014882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 86
               

               
Conread position:
               
145-723
               

               
Cow position:
               
chr7:18390225-18390806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 53
               

               
Conread position:
               
170-745
               

               
Cow position:
               
chr7:12293268-12293846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 28
               

               
Conread position:
               
180-744
               

               
Cow position:
               
chr7:28846437-28847004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 205
               

               
Conread position:
               
224-745
               

               
Cow position:
               
chr7:18390136-18390660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
141, 146
               

               
Conread position:
               
227-745
               

               
Cow position:
               
chr7:3179842-3180363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
229, 239
               

               
Conread position:
               
227-745
               

               
Cow position:
               
chr7:18390223-18390744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 200
               

               
Conread position:
               
229-743
               

               
Cow position:
               
chr7:42879129-42878612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
229, 392
               

               
Conread position:
               
241-712
               

               
Cow position:
               
chr7:42879201-42878728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 65
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr8:45201522-45201976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
127, 426
               

               
Conread position:
               
1-695
               

               
Cow position:
               
chr8:46816213-46816913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
1-719
               

               
Cow position:
               
chr8:46816381-46817105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
124, 201
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr8:48407546-48406796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 300
               

               
Conread position:
               
1-753
               

               
Cow position:
               
chr8:45201186-45201948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
35-743
               

               
Cow position:
               
chr8:48407008-48406294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
54-745
               

               
Cow position:
               
chr8:45200987-45201684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
77, 148
               

               
Conread position:
               
56-745
               

               
Cow position:
               
chr8:48407575-48406880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 381
               

               
Conread position:
               
64-745
               

               
Cow position:
               
chr8:45201165-45201852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 366
               

               
Conread position:
               
144-706
               

               
Cow position:
               
chr8:46816779-46817344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
160, 150
               

               
Conread position:
               
144-757
               

               
Cow position:
               
chr8:48407568-48406951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
317, 422
               

               
Conread position:
               
145-734
               

               
Cow position:
               
chr8:46816276-46816868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
316, 502
               

               
Conread position:
               
157-705
               

               
Cow position:
               
chr8:55580897-55581447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 541
               

               
Conread position:
               
224-710
               

               
Cow position:
               
chr8:55580880-55581369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 0
               

               
Conread position:
               
228-737
               

               
Cow position:
               
chr8:46816107-46816619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
81, 66
               

               
Conread position:
               
241-734
               

               
Cow position:
               
chr8:46816792-46817288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
215, 393
               

               
Conread position:
               
274-778
               

               
Cow position:
               
chr8:55580846-55581353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 283
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chrX:25309974-25310566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
1-610
               

               
Cow position:
               
chrX:13826780-13826165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
122, 148
               

               
Conread position:
               
1-611
               

               
Cow position:
               
chrX:14181558-14180942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 148
               

               
Conread position:
               
1-695
               

               
Cow position:
               
chrX:13826948-13826248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 134
               

               
Conread position:
               
3-661
               

               
Cow position:
               
chrX:13826862-13826198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
29-677
               

               
Cow position:
               
chrX:25309749-25310404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
43-737
               

               
Cow position:
               
chrX:25325377-25324677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
82, 388
               

               
Conread position:
               
62-734
               

               
Cow position:
               
chrX:13826971-13826293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
62, 163
               

               
Conread position:
               
82-705
               

               
Cow position:
               
chrX:25309719-25310347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
39, 225
               

               
Conread position:
               
144-722
               

               
Cow position:
               
chrX:25325021-25324440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
71, 56
               

               
Conread position:
               
154-743
               

               
Cow position:
               
chrX:25325347-25324755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
301, 382
               

               
Conread position:
               
157-746
               

               
Cow position:
               
chrX:14181567-14180975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
148, 133
               

               
Conread position:
               
160-746
               

               
Cow position:
               
chrX:14181648-14181059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
315, 0
               

               
Conread position:
               
220-745
               

               
Cow position:
               
chrX:25325029-25324501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 80
               

               
Conread position:
               
253-745
               

               
Cow position:
               
chrX:14181639-14181144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
55, 61
               

               
Conread position:
               
313-753
               

               
Cow position:
               
chrX:29045113-29044667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
334-746
               

               
Cow position:
               
chrX:13826948-13826533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 58