Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8021B14.5
        

               Conread position:
               509-671
               

               Cow position:
               chr1:89297835-89297997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               32, 53
               

               Conread position:
               509-671
               

               Cow position:
               chr1:89301444-89301606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               32, 53
               

               Conread position:
               516-708
               

               Cow position:
               chr1:100552232-100552041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               519-669
               

               Cow position:
               chr1:71665667-71665821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               535-701
               

               Cow position:
               chr1:54258812-54258639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               119, 23
               

               Conread position:
               545-662
               

               Cow position:
               chr1:8354078-8353955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               546-708
               

               Cow position:
               chr1:69250670-69250500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 96
               

               Conread position:
               548-708
               

               Cow position:
               chr1:95153110-95152937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               550-664
               

               Cow position:
               chr1:22261710-22261594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               550-700
               

               Cow position:
               chr1:2715250-2715096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               108, 90
               

               Conread position:
               550-700
               

               Cow position:
               chr1:43855520-43855369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               93, 28
               

               Conread position:
               551-700
               

               Cow position:
               chr1:15875893-15875734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               551-708
               

               Cow position:
               chr1:27792826-27792982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               552-669
               

               Cow position:
               chr1:20551123-20551006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               552-698
               

               Cow position:
               chr1:6759815-6759959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               552-701
               

               Cow position:
               chr1:41022643-41022492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               114, 26
               

               Conread position:
               552-708
               

               Cow position:
               chr1:91065931-91066086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               102, 32
               

               Conread position:
               553-669
               

               Cow position:
               chr1:81391151-81391035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               553-669
               

               Cow position:
               chr1:93744075-93743959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               553-670
               

               Cow position:
               chr1:97232200-97232085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               553-700
               

               Cow position:
               chr1:95017332-95017473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               553-701
               

               Cow position:
               chr1:22628425-22628577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 60
               

               Conread position:
               553-701
               

               Cow position:
               chr1:49297878-49297724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               107, 24
               

               Conread position:
               553-708
               

               Cow position:
               chr1:97536507-97536356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               555-658
               

               Cow position:
               chr1:7443211-7443106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               555-659
               

               Cow position:
               chr1:46220956-46221060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               89, 43
               

               Conread position:
               555-659
               

               Cow position:
               chr1:95153470-95153368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               555-663
               

               Cow position:
               chr1:42537074-42537182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-663
               

               Cow position:
               chr1:47883368-47883476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr1:36306908-36306791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr1:67160063-67160174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               555-670
               

               Cow position:
               chr1:38706626-38706740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               555-697
               

               Cow position:
               chr1:16060781-16060927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               555-700
               

               Cow position:
               chr1:43340408-43340560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               105, 27
               

               Conread position:
               555-700
               

               Cow position:
               chr1:66445183-66445036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               103, 53
               

               Conread position:
               555-700
               

               Cow position:
               chr1:67919356-67919209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               33, 110
               

               Conread position:
               555-701
               

               Cow position:
               chr1:83677096-83677251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               555-702
               

               Cow position:
               chr1:47790438-47790594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 108
               

               Conread position:
               555-708
               

               Cow position:
               chr1:20537431-20537271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr1:64803868-64804036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr1:71119750-71119587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               18, 148
               

               Conread position:
               555-708
               

               Cow position:
               chr1:87934053-87934205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               99, 76
               

               Conread position:
               556-669
               

               Cow position:
               chr1:71650699-71650583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               556-669
               

               Cow position:
               chr1:89146645-89146759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-669
               

               Cow position:
               chr1:95835567-95835682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               556-677
               

               Cow position:
               chr1:1915800-1915921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 64
               

               Conread position:
               556-700
               

               Cow position:
               chr1:54156508-54156661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               557-669
               

               Cow position:
               chr1:36089989-36090101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               557-669
               

               Cow position:
               chr1:60403995-60403882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               558-669
               

               Cow position:
               chr1:24876740-24876629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               558-669
               

               Cow position:
               chr1:47966796-47966907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               558-697
               

               Cow position:
               chr1:70538830-70538688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               558-700
               

               Cow position:
               chr1:84787481-84787344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               558-708
               

               Cow position:
               chr1:34001268-34001114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr1:3685813-3685702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr1:34767519-34767406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr1:68664152-68664040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 74
               

               Conread position:
               559-669
               

               Cow position:
               chr1:78857103-78857213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               559-699
               

               Cow position:
               chr1:42482424-42482272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-708
               

               Cow position:
               chr1:43379138-43379296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               559-708
               

               Cow position:
               chr1:71321780-71321934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               560-669
               

               Cow position:
               chr1:47190771-47190879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               560-669
               

               Cow position:
               chr1:100823263-100823153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               560-684
               

               Cow position:
               chr1:82936383-82936507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               112, 42
               

               Conread position:
               561-659
               

               Cow position:
               chr1:65883435-65883337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               561-659
               

               Cow position:
               chr1:72142075-72141977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               561-660
               

               Cow position:
               chr1:81515461-81515361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr1:5767103-5766993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr1:53403008-53402897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               561-697
               

               Cow position:
               chr1:8778117-8778258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               93, 116
               

               Conread position:
               561-708
               

               Cow position:
               chr1:40303770-40303617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               562-708
               

               Cow position:
               chr1:21954005-21954157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               21, 99
               

               Conread position:
               562-708
               

               Cow position:
               chr1:63994334-63994489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               563-668
               

               Cow position:
               chr1:77739944-77739838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr1:69442294-69442402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr1:74083969-74084075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               563-708
               

               Cow position:
               chr1:36887110-36887261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               563-708
               

               Cow position:
               chr1:42541810-42541664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               93, 41
               

               Conread position:
               564-700
               

               Cow position:
               chr1:25021859-25022001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               18, 96
               

               Conread position:
               564-705
               

               Cow position:
               chr1:22824127-22823974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               564-708
               

               Cow position:
               chr1:6731398-6731246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               564-708
               

               Cow position:
               chr1:41182055-41181911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               17, 103
               

               Conread position:
               565-669
               

               Cow position:
               chr1:87094996-87095098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               565-700
               

               Cow position:
               chr1:84128-83996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               565-708
               

               Cow position:
               chr1:21787541-21787402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               565-708
               

               Cow position:
               chr1:51417982-51417837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               29, 72
               

               Conread position:
               566-669
               

               Cow position:
               chr1:67585766-67585664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               566-708
               

               Cow position:
               chr1:527867-528006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               566-708
               

               Cow position:
               chr1:17056206-17056057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               566-708
               

               Cow position:
               chr1:51626579-51626723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               567-669
               

               Cow position:
               chr1:25699231-25699127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               568-707
               

               Cow position:
               chr1:45680482-45680342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               568-708
               

               Cow position:
               chr1:62181924-62182064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 93
               

               Conread position:
               570-677
               

               Cow position:
               chr1:80312035-80312143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               570-700
               

               Cow position:
               chr1:7740155-7740021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               570-701
               

               Cow position:
               chr1:32014401-32014269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               86, 12
               

               Conread position:
               571-664
               

               Cow position:
               chr1:82336884-82336789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               84
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               571-708
               

               Cow position:
               chr1:11770031-11770170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               81, 103
               

               Conread position:
               571-708
               

               Cow position:
               chr1:64302039-64302177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               98, 39
               

               Conread position:
               572-670
               

               Cow position:
               chr1:3324084-3323986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               572-700
               

               Cow position:
               chr1:53474358-53474229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               96, 85
               

               Conread position:
               576-698
               

               Cow position:
               chr1:38754123-38753999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               576-708
               

               Cow position:
               chr1:81858695-81858834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               578-669
               

               Cow position:
               chr1:53441911-53442002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               79
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-669
               

               Cow position:
               chr1:74919771-74919862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-670
               

               Cow position:
               chr1:10610468-10610560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-697
               

               Cow position:
               chr1:72011618-72011736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               86, 79
               

               Conread position:
               578-701
               

               Cow position:
               chr1:34952442-34952316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               80, 106
               

               Conread position:
               578-708
               

               Cow position:
               chr1:51860360-51860495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               579-669
               

               Cow position:
               chr1:68710487-68710397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               80
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               580-669
               

               Cow position:
               chr1:71664692-71664781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               77
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               588-708
               

               Cow position:
               chr1:47886286-47886414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               590-700
               

               Cow position:
               chr1:70044536-70044427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               517-701
               

               Cow position:
               chr10:38800076-38799881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 32
               

               Conread position:
               528-669
               

               Cow position:
               chr10:32649027-32649166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               538-669
               

               Cow position:
               chr10:46934562-46934695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               545-669
               

               Cow position:
               chr10:46043203-46043077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               549-701
               

               Cow position:
               chr10:36945594-36945759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               551-671
               

               Cow position:
               chr10:17518642-17518764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               552-661
               

               Cow position:
               chr10:63312532-63312642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               552-664
               

               Cow position:
               chr10:67442922-67443034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               108, 8
               

               Conread position:
               552-671
               

               Cow position:
               chr10:35717070-35717191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               552-704
               

               Cow position:
               chr10:24312692-24312848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               29, 7
               

               Conread position:
               552-708
               

               Cow position:
               chr10:41408471-41408312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 124
               

               Conread position:
               553-701
               

               Cow position:
               chr10:24753337-24753189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               26, 80
               

               Conread position:
               553-708
               

               Cow position:
               chr10:45294942-45295106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               100, 23
               

               Conread position:
               555-669
               

               Cow position:
               chr10:38195776-38195891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               555-670
               

               Cow position:
               chr10:23346112-23346225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               105, 22
               

               Conread position:
               555-699
               

               Cow position:
               chr10:49686945-49686790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               14, 82
               

               Conread position:
               555-700
               

               Cow position:
               chr10:42353131-42352990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               106, 26
               

               Conread position:
               555-708
               

               Cow position:
               chr10:15601980-15602145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr10:45658336-45658181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               99, 63
               

               Conread position:
               556-660
               

               Cow position:
               chr10:31718185-31718289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               556-678
               

               Cow position:
               chr10:59663738-59663863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               556-699
               

               Cow position:
               chr10:25150082-25149934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               556-701
               

               Cow position:
               chr10:22960982-22961129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               26, 99
               

               Conread position:
               556-701
               

               Cow position:
               chr10:40738187-40738036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-708
               

               Cow position:
               chr10:41132460-41132301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               557-669
               

               Cow position:
               chr10:38370254-38370369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               557-708
               

               Cow position:
               chr10:4109776-4109625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 99
               

               Conread position:
               558-669
               

               Cow position:
               chr10:18154285-18154174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               558-708
               

               Cow position:
               chr10:10153201-10153046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 129
               

               Conread position:
               558-708
               

               Cow position:
               chr10:22980783-22980942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr10:44730281-44730391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr10:54263420-54263308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-700
               

               Cow position:
               chr10:10027766-10027615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               101, 19
               

               Conread position:
               559-701
               

               Cow position:
               chr10:50182862-50183009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               99, 28
               

               Conread position:
               560-660
               

               Cow position:
               chr10:2328385-2328284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               22, 69
               

               Conread position:
               560-700
               

               Cow position:
               chr10:25822062-25822199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               561-659
               

               Cow position:
               chr10:77620-77522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               561-659
               

               Cow position:
               chr10:6516893-6516796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               561-659
               

               Cow position:
               chr10:55382509-55382411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               561-669
               

               Cow position:
               chr10:19394257-19394367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               561-695
               

               Cow position:
               chr10:49571392-49571256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               561-700
               

               Cow position:
               chr10:17448018-17448154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               561-700
               

               Cow position:
               chr10:31000048-31000186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               96, 50
               

               Conread position:
               561-708
               

               Cow position:
               chr10:9797721-9797874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               101, 50
               

               Conread position:
               561-708
               

               Cow position:
               chr10:16598884-16598725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               562-659
               

               Cow position:
               chr10:22810843-22810943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               563-659
               

               Cow position:
               chr10:8161696-8161599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               563-708
               

               Cow position:
               chr10:44771837-44771686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               564-661
               

               Cow position:
               chr10:25913593-25913690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               564-700
               

               Cow position:
               chr10:31528154-31528014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               102, 17
               

               Conread position:
               564-700
               

               Cow position:
               chr10:39387635-39387498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               90, 17
               

               Conread position:
               564-701
               

               Cow position:
               chr10:18849713-18849566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               564-706
               

               Cow position:
               chr10:60962622-60962481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               115, 97
               

               Conread position:
               564-708
               

               Cow position:
               chr10:69934595-69934744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 47
               

               Conread position:
               565-658
               

               Cow position:
               chr10:31004828-31004921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               81
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               565-708
               

               Cow position:
               chr10:34674201-34674054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               565-708
               

               Cow position:
               chr10:45871706-45871551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               566-659
               

               Cow position:
               chr10:19394378-19394473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               83
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               566-701
               

               Cow position:
               chr10:34705466-34705320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               567-669
               

               Cow position:
               chr10:28721963-28721861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               568-700
               

               Cow position:
               chr10:60236916-60237051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               568-701
               

               Cow position:
               chr10:50050084-50049948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 45
               

               Conread position:
               568-708
               

               Cow position:
               chr10:30452015-30451875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               14, 93
               

               Conread position:
               569-671
               

               Cow position:
               chr10:50151365-50151467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               569-708
               

               Cow position:
               chr10:9656342-9656486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               569-708
               

               Cow position:
               chr10:37014819-37014670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               82, 51
               

               Conread position:
               570-669
               

               Cow position:
               chr10:45378819-45378918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               572-669
               

               Cow position:
               chr10:42574209-42574112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               576-686
               

               Cow position:
               chr10:40164202-40164318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               576-708
               

               Cow position:
               chr10:16830208-16830350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               576-708
               

               Cow position:
               chr10:17844941-17844803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               578-699
               

               Cow position:
               chr10:11060358-11060482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               578-700
               

               Cow position:
               chr10:25342756-25342629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               578-700
               

               Cow position:
               chr10:51289418-51289294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               578-701
               

               Cow position:
               chr10:42115529-42115403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               89, 75
               

               Conread position:
               579-688
               

               Cow position:
               chr10:8068287-8068178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               82, 93
               

               Conread position:
               580-708
               

               Cow position:
               chr10:17073195-17073328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               583-701
               

               Cow position:
               chr10:33914899-33915022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               587-700
               

               Cow position:
               chr10:58149005-58149125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               589-708
               

               Cow position:
               chr10:42746073-42745954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 22
               

               Conread position:
               544-705
               

               Cow position:
               chr11:77013988-77013826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               29, 129
               

               Conread position:
               546-708
               

               Cow position:
               chr11:23220580-23220405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               547-669
               

               Cow position:
               chr11:6581046-6580925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               547-697
               

               Cow position:
               chr11:27461900-27462045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               547-697
               

               Cow position:
               chr11:81143332-81143487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               119, 31
               

               Conread position:
               549-700
               

               Cow position:
               chr11:28078697-28078544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               117, 10
               

               Conread position:
               551-708
               

               Cow position:
               chr11:17559325-17559173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 92
               

               Conread position:
               553-708
               

               Cow position:
               chr11:58186079-58185925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               554-669
               

               Cow position:
               chr11:55744678-55744560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               554-701
               

               Cow position:
               chr11:24551596-24551438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               106, 7
               

               Conread position:
               554-708
               

               Cow position:
               chr11:33271638-33271473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr11:12080051-12079935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               34, 107
               

               Conread position:
               555-669
               

               Cow position:
               chr11:12555097-12555213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr11:16315081-16314965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-701
               

               Cow position:
               chr11:39462824-39462673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               111, 104
               

               Conread position:
               555-708
               

               Cow position:
               chr11:7571825-7571667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr11:52690320-52690478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 65
               

               Conread position:
               556-669
               

               Cow position:
               chr11:17889523-17889636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               556-692
               

               Cow position:
               chr11:54130235-54130095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               18, 120
               

               Conread position:
               556-696
               

               Cow position:
               chr11:18483995-18484134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 90
               

               Conread position:
               556-699
               

               Cow position:
               chr11:62742441-62742594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               557-656
               

               Cow position:
               chr11:21637395-21637496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               557-670
               

               Cow position:
               chr11:67345452-67345572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               558-659
               

               Cow position:
               chr11:70710015-70709912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               559-655
               

               Cow position:
               chr11:49210613-49210712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr11:25968652-25968762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr11:30165712-30165602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr11:62102242-62102355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr11:83042037-83042149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-701
               

               Cow position:
               chr11:44176794-44176645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               102, 60
               

               Conread position:
               559-708
               

               Cow position:
               chr11:15772511-15772671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               560-684
               

               Cow position:
               chr11:80824103-80823976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               560-708
               

               Cow position:
               chr11:37565069-37564916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               560-708
               

               Cow position:
               chr11:77227732-77227581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               561-659
               

               Cow position:
               chr11:13592940-13592840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               561-665
               

               Cow position:
               chr11:15591281-15591384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr11:66939391-66939500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-670
               

               Cow position:
               chr11:68870464-68870576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-679
               

               Cow position:
               chr11:55334118-55334001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               561-700
               

               Cow position:
               chr11:45671181-45671319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               93, 82
               

               Conread position:
               561-701
               

               Cow position:
               chr11:37099972-37100123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               562-669
               

               Cow position:
               chr11:22102558-22102667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               562-669
               

               Cow position:
               chr11:83398105-83397998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               562-701
               

               Cow position:
               chr11:21322305-21322445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 111
               

               Conread position:
               562-708
               

               Cow position:
               chr11:18699070-18698922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 116
               

               Conread position:
               563-667
               

               Cow position:
               chr11:75874574-75874679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr11:28092650-28092542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr11:68909335-68909443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               563-708
               

               Cow position:
               chr11:82732957-82733107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               564-669
               

               Cow position:
               chr11:8828206-8828101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               565-700
               

               Cow position:
               chr11:2937477-2937613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               565-708
               

               Cow position:
               chr11:17369722-17369573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               566-701
               

               Cow position:
               chr11:51683410-51683265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               566-708
               

               Cow position:
               chr11:1980069-1980225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               567-706
               

               Cow position:
               chr11:59744189-59744050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               119, 104
               

               Conread position:
               568-661
               

               Cow position:
               chr11:46335042-46334949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               79
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               568-669
               

               Cow position:
               chr11:41278381-41278278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               568-697
               

               Cow position:
               chr11:46784655-46784527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               568-708
               

               Cow position:
               chr11:1485042-1485184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               569-669
               

               Cow position:
               chr11:26823304-26823203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               569-700
               

               Cow position:
               chr11:57170419-57170548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               570-708
               

               Cow position:
               chr11:10095535-10095386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               571-708
               

               Cow position:
               chr11:63485121-63484980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               576-700
               

               Cow position:
               chr11:3267483-3267605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 78
               

               Conread position:
               578-659
               

               Cow position:
               chr11:48932407-48932488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               73
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-664
               

               Cow position:
               chr11:10294572-10294486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               87
               

               Alignm identity:
               77
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-668
               

               Cow position:
               chr11:17859971-17860062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               79
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               578-669
               

               Cow position:
               chr11:53817037-53816946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-689
               

               Cow position:
               chr11:67600960-67600846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr11:21830029-21830167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               83, 70
               

               Conread position:
               583-708
               

               Cow position:
               chr11:57608289-57608417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               77, 44
               

               Conread position:
               588-670
               

               Cow position:
               chr11:26343274-26343192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               75
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               588-699
               

               Cow position:
               chr11:13042976-13043094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               519-700
               

               Cow position:
               chr12:30210689-30210513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               24, 60
               

               Conread position:
               539-708
               

               Cow position:
               chr12:35469252-35469425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               42, 10
               

               Conread position:
               540-660
               

               Cow position:
               chr12:6719594-6719468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               551-660
               

               Cow position:
               chr12:31711694-31711804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               551-696
               

               Cow position:
               chr12:29131772-29131631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               114, 33
               

               Conread position:
               552-708
               

               Cow position:
               chr12:40910099-40910263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               554-669
               

               Cow position:
               chr12:45135821-45135938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               554-708
               

               Cow position:
               chr12:45782409-45782248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               555-660
               

               Cow position:
               chr12:35217849-35217954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-667
               

               Cow position:
               chr12:43974477-43974363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr12:13995609-13995726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr12:25193227-25193110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr12:37718581-37718699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               555-700
               

               Cow position:
               chr12:17250686-17250541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               98, 23
               

               Conread position:
               555-700
               

               Cow position:
               chr12:38774060-38774213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               556-669
               

               Cow position:
               chr12:39149865-39149980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               556-708
               

               Cow position:
               chr12:2707909-2708063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 47
               

               Conread position:
               556-708
               

               Cow position:
               chr12:11272645-11272804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               558-659
               

               Cow position:
               chr12:10942476-10942373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               558-660
               

               Cow position:
               chr12:37480656-37480759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               558-694
               

               Cow position:
               chr12:38031962-38032104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-658
               

               Cow position:
               chr12:6187930-6188029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               559-697
               

               Cow position:
               chr12:41684685-41684540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-701
               

               Cow position:
               chr12:26749771-26749923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               101, 55
               

               Conread position:
               559-708
               

               Cow position:
               chr12:42951511-42951666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               562-669
               

               Cow position:
               chr12:9055238-9055347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               562-669
               

               Cow position:
               chr12:34878016-34877906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               562-697
               

               Cow position:
               chr12:13911398-13911540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 99
               

               Conread position:
               562-708
               

               Cow position:
               chr12:4720122-4719969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               562-708
               

               Cow position:
               chr12:27331992-27332133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               562-708
               

               Cow position:
               chr12:27802880-27803027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               20, 112
               

               Conread position:
               563-660
               

               Cow position:
               chr12:26670243-26670144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               564-669
               

               Cow position:
               chr12:4109223-4109115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               564-669
               

               Cow position:
               chr12:27663814-27663921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               564-670
               

               Cow position:
               chr12:19664145-19664251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 90
               

               Conread position:
               565-660
               

               Cow position:
               chr12:8143640-8143735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               567-669
               

               Cow position:
               chr12:10456313-10456210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               568-708
               

               Cow position:
               chr12:32808444-32808591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               569-672
               

               Cow position:
               chr12:35310513-35310616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               570-708
               

               Cow position:
               chr12:11587939-11587796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               12, 43
               

               Conread position:
               571-669
               

               Cow position:
               chr12:37742468-37742370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               571-700
               

               Cow position:
               chr12:40157862-40157995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               76, 10
               

               Conread position:
               573-700
               

               Cow position:
               chr12:44822447-44822322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               578-669
               

               Cow position:
               chr12:22048084-22047993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-708
               

               Cow position:
               chr12:6666720-6666592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               85, 80
               

               Conread position:
               590-700
               

               Cow position:
               chr12:4769067-4768955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               541-668
               

               Cow position:
               chr13:23680557-23680686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               542-669
               

               Cow position:
               chr13:32282874-32283003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               18, 55
               

               Conread position:
               544-670
               

               Cow position:
               chr13:32017759-32017635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               122, 14
               

               Conread position:
               547-708
               

               Cow position:
               chr13:11686197-11686041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               549-669
               

               Cow position:
               chr13:9800283-9800398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               551-708
               

               Cow position:
               chr13:9551127-9551286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               103, 27
               

               Conread position:
               552-708
               

               Cow position:
               chr13:56035094-56034934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               106, 26
               

               Conread position:
               553-669
               

               Cow position:
               chr13:49795805-49795917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               553-708
               

               Cow position:
               chr13:11146811-11146982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               553-708
               

               Cow position:
               chr13:17823190-17823025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               554-669
               

               Cow position:
               chr13:23975405-23975287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               554-700
               

               Cow position:
               chr13:21981204-21981057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               104, 23
               

               Conread position:
               554-708
               

               Cow position:
               chr13:43576774-43576939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               555-663
               

               Cow position:
               chr13:21024749-21024857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               99, 23
               

               Conread position:
               555-666
               

               Cow position:
               chr13:32186029-32186141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 110
               

               Conread position:
               555-669
               

               Cow position:
               chr13:10925160-10925044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr13:14383837-14383955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr13:20654097-20653983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-679
               

               Cow position:
               chr13:8481919-8482046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-701
               

               Cow position:
               chr13:2529187-2529032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr13:242393-242560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr13:13797054-13796886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr13:45593690-45593846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               103, 22
               

               Conread position:
               556-669
               

               Cow position:
               chr13:28536557-28536442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               556-708
               

               Cow position:
               chr13:24796648-24796803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               556-708
               

               Cow position:
               chr13:27028140-27027977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-708
               

               Cow position:
               chr13:37030113-37030267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               557-660
               

               Cow position:
               chr13:17624082-17624189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               557-660
               

               Cow position:
               chr13:28605632-28605525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               557-696
               

               Cow position:
               chr13:10845381-10845517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               25, 103
               

               Conread position:
               557-708
               

               Cow position:
               chr13:5659999-5659842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               558-669
               

               Cow position:
               chr13:19177937-19178048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               558-708
               

               Cow position:
               chr13:49356282-49356124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-659
               

               Cow position:
               chr13:10099156-10099054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-659
               

               Cow position:
               chr13:17619361-17619462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-660
               

               Cow position:
               chr13:29507381-29507480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr13:620477-620369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 24
               

               Conread position:
               559-669
               

               Cow position:
               chr13:15162869-15162757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               559-700
               

               Cow position:
               chr13:24753662-24753804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               560-663
               

               Cow position:
               chr13:36666625-36666522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               560-669
               

               Cow position:
               chr13:15868878-15868989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               561-660
               

               Cow position:
               chr13:54690135-54690236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr13:15993151-15993262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr13:41157168-41157276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr13:10220726-10220886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr13:53847350-53847196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               562-660
               

               Cow position:
               chr13:52929203-52929301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               562-668
               

               Cow position:
               chr13:37418574-37418468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               562-701
               

               Cow position:
               chr13:51106896-51107037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               90, 86
               

               Conread position:
               562-708
               

               Cow position:
               chr13:29802397-29802540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 51
               

               Conread position:
               562-708
               

               Cow position:
               chr13:40490989-40491140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               92, 69
               

               Conread position:
               563-660
               

               Cow position:
               chr13:14940570-14940667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               563-668
               

               Cow position:
               chr13:26377650-26377543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               563-708
               

               Cow position:
               chr13:20854689-20854531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               564-669
               

               Cow position:
               chr13:22729632-22729527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               564-672
               

               Cow position:
               chr13:17971494-17971598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               564-707
               

               Cow position:
               chr13:9124702-9124849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               90, 136
               

               Conread position:
               564-708
               

               Cow position:
               chr13:3153519-3153675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               564-708
               

               Cow position:
               chr13:34533156-34533007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               18, 80
               

               Conread position:
               565-659
               

               Cow position:
               chr13:1339371-1339276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               565-660
               

               Cow position:
               chr13:14351356-14351449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               565-697
               

               Cow position:
               chr13:33974521-33974648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               565-699
               

               Cow position:
               chr13:4965173-4965311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               567-700
               

               Cow position:
               chr13:25561407-25561537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               568-677
               

               Cow position:
               chr13:6113754-6113645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               101, 95
               

               Conread position:
               568-697
               

               Cow position:
               chr13:57986154-57986024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               91, 105
               

               Conread position:
               569-700
               

               Cow position:
               chr13:14575994-14576130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               569-708
               

               Cow position:
               chr13:47676159-47676010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               570-700
               

               Cow position:
               chr13:9108893-9108758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               570-708
               

               Cow position:
               chr13:6996934-6997078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               570-708
               

               Cow position:
               chr13:37946606-37946464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               571-701
               

               Cow position:
               chr13:24715030-24715159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               572-700
               

               Cow position:
               chr13:17745040-17745165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               572-708
               

               Cow position:
               chr13:50646848-50646706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               573-660
               

               Cow position:
               chr13:21955287-21955200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               573-669
               

               Cow position:
               chr13:14411674-14411770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-659
               

               Cow position:
               chr13:20520098-20520179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               73
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-700
               

               Cow position:
               chr13:6980713-6980837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr13:55007982-55007847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               579-700
               

               Cow position:
               chr13:20784383-20784507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               580-669
               

               Cow position:
               chr13:18874922-18875011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               78
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               580-669
               

               Cow position:
               chr13:40541319-40541230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               77
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               536-704
               

               Cow position:
               chr14:41623128-41623298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 11
               

               Conread position:
               540-669
               

               Cow position:
               chr14:25517143-25517012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               540-701
               

               Cow position:
               chr14:33457244-33457068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 5
               

               Conread position:
               540-708
               

               Cow position:
               chr14:36443211-36443036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 5
               

               Conread position:
               545-669
               

               Cow position:
               chr14:13516178-13516057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               545-676
               

               Cow position:
               chr14:13176622-13176488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               545-693
               

               Cow position:
               chr14:6389078-6388918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               8, 59
               

               Conread position:
               545-708
               

               Cow position:
               chr14:5044490-5044653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               109, 33
               

               Conread position:
               546-708
               

               Cow position:
               chr14:23104189-23104016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               549-708
               

               Cow position:
               chr14:28304976-28304803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               26, 146
               

               Conread position:
               550-665
               

               Cow position:
               chr14:40780690-40780575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               553-669
               

               Cow position:
               chr14:30050133-30050013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               554-708
               

               Cow position:
               chr14:24921916-24922082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-651
               

               Cow position:
               chr14:30431981-30431883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-655
               

               Cow position:
               chr14:21018599-21018700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-668
               

               Cow position:
               chr14:20640806-20640696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr14:11981286-11981399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr14:15944846-15944731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr14:26918815-26918928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr14:39097328-39097439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               555-698
               

               Cow position:
               chr14:37152115-37151967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               27, 145
               

               Conread position:
               555-700
               

               Cow position:
               chr14:12512072-12511922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 103
               

               Conread position:
               555-700
               

               Cow position:
               chr14:13809775-13809914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr14:109658-109508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 83
               

               Conread position:
               555-708
               

               Cow position:
               chr14:12244562-12244403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr14:20245344-20245187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               105, 23
               

               Conread position:
               555-708
               

               Cow position:
               chr14:40754422-40754265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               103, 23
               

               Conread position:
               556-701
               

               Cow position:
               chr14:18559238-18559086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               556-708
               

               Cow position:
               chr14:23442847-23443004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 82
               

               Conread position:
               557-708
               

               Cow position:
               chr14:36289971-36289816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               12, 119
               

               Conread position:
               558-669
               

               Cow position:
               chr14:12081302-12081191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               93, 103
               

               Conread position:
               558-669
               

               Cow position:
               chr14:42080095-42079981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr14:13006348-13006459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr14:18412769-18412659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr14:34330998-34330886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               560-669
               

               Cow position:
               chr14:41755981-41756091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               560-708
               

               Cow position:
               chr14:21593175-21593021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               101, 35
               

               Conread position:
               560-708
               

               Cow position:
               chr14:21946213-21946374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               561-667
               

               Cow position:
               chr14:11470326-11470217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr14:8591020-8590866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr14:35421260-35421101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               562-669
               

               Cow position:
               chr14:23100439-23100547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 33
               

               Conread position:
               562-675
               

               Cow position:
               chr14:5634383-5634271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               562-675
               

               Cow position:
               chr14:31130551-31130437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 91
               

               Conread position:
               562-700
               

               Cow position:
               chr14:40806770-40806637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               562-708
               

               Cow position:
               chr14:23424092-23424243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 76
               

               Conread position:
               562-708
               

               Cow position:
               chr14:41267897-41267750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               20, 111
               

               Conread position:
               563-661
               

               Cow position:
               chr14:26824851-26824751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr14:26115886-26115994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr14:45955116-45955223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               564-649
               

               Cow position:
               chr14:36538047-36537961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               87
               

               Alignm identity:
               77
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               565-669
               

               Cow position:
               chr14:27364406-27364512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               566-700
               

               Cow position:
               chr14:10858272-10858407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               94, 79
               

               Conread position:
               567-669
               

               Cow position:
               chr14:8923754-8923653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               567-669
               

               Cow position:
               chr14:38296366-38296263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               567-699
               

               Cow position:
               chr14:2975254-2975111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               568-660
               

               Cow position:
               chr14:44464994-44464905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               80
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               568-669
               

               Cow position:
               chr14:27044958-27044854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               568-700
               

               Cow position:
               chr14:10721868-10721732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               571-669
               

               Cow position:
               chr14:15518568-15518468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               572-660
               

               Cow position:
               chr14:5503660-5503572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               76
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               574-708
               

               Cow position:
               chr14:11079293-11079434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               576-669
               

               Cow position:
               chr14:7386711-7386618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               79
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               576-669
               

               Cow position:
               chr14:29592874-29592781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               79
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-700
               

               Cow position:
               chr14:35503207-35503334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               528-669
               

               Cow position:
               chr15:32022478-32022334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               544-708
               

               Cow position:
               chr15:19770996-19771165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               116, 38
               

               Conread position:
               549-701
               

               Cow position:
               chr15:36346656-36346806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               550-658
               

               Cow position:
               chr15:33729746-33729856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               551-700
               

               Cow position:
               chr15:21893646-21893800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               105, 31
               

               Conread position:
               552-652
               

               Cow position:
               chr15:3211157-3211059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               552-666
               

               Cow position:
               chr15:25125012-25125128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               552-669
               

               Cow position:
               chr15:4284235-4284353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               553-669
               

               Cow position:
               chr15:36435068-36435184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               29, 6
               

               Conread position:
               553-669
               

               Cow position:
               chr15:44809932-44810048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 6
               

               Conread position:
               554-669
               

               Cow position:
               chr15:22444122-22444005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               555-651
               

               Cow position:
               chr15:18647072-18646974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-659
               

               Cow position:
               chr15:8665739-8665635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr15:2968201-2968316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr15:14760774-14760658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr15:21941978-21941866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-700
               

               Cow position:
               chr15:43114848-43114699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               103, 31
               

               Conread position:
               555-701
               

               Cow position:
               chr15:11635284-11635434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr15:39405610-39405773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               556-669
               

               Cow position:
               chr15:20565996-20566110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-708
               

               Cow position:
               chr15:14880465-14880313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 93
               

               Conread position:
               558-700
               

               Cow position:
               chr15:24967672-24967815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               559-700
               

               Cow position:
               chr15:5409021-5408876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               99, 19
               

               Conread position:
               559-708
               

               Cow position:
               chr15:20534582-20534421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               560-669
               

               Cow position:
               chr15:23572820-23572707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               560-699
               

               Cow position:
               chr15:36457741-36457599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               106, 24
               

               Conread position:
               561-656
               

               Cow position:
               chr15:11909073-11908978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               80
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               561-659
               

               Cow position:
               chr15:10737906-10737808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr15:52791814-52791922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               561-700
               

               Cow position:
               chr15:22531547-22531688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr15:26380875-26380715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr15:41321078-41320927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               93, 147
               

               Conread position:
               562-669
               

               Cow position:
               chr15:40562811-40562701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               562-696
               

               Cow position:
               chr15:36539817-36539961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               562-708
               

               Cow position:
               chr15:19554052-19553895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               563-700
               

               Cow position:
               chr15:5235115-5234976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               91, 60
               

               Conread position:
               563-708
               

               Cow position:
               chr15:37381507-37381656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               95, 19
               

               Conread position:
               563-708
               

               Cow position:
               chr15:48052722-48052575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               95, 45
               

               Conread position:
               565-669
               

               Cow position:
               chr15:4418525-4418420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               565-700
               

               Cow position:
               chr15:4138012-4138157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               567-660
               

               Cow position:
               chr15:42142750-42142846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               567-708
               

               Cow position:
               chr15:17124593-17124439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               568-708
               

               Cow position:
               chr15:20906151-20906003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               568-708
               

               Cow position:
               chr15:25349858-25349997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               77, 13
               

               Conread position:
               569-701
               

               Cow position:
               chr15:30001581-30001716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               85, 13
               

               Conread position:
               570-670
               

               Cow position:
               chr15:12034812-12034711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               570-708
               

               Cow position:
               chr15:42353280-42353415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               571-669
               

               Cow position:
               chr15:44119587-44119488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               11, 53
               

               Conread position:
               573-669
               

               Cow position:
               chr15:12045655-12045559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               576-708
               

               Cow position:
               chr15:10246106-10245965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               578-705
               

               Cow position:
               chr15:19942488-19942619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr15:662573-662439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               583-708
               

               Cow position:
               chr15:85350-85216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               531-708
               

               Cow position:
               chr16:10011595-10011792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               536-700
               

               Cow position:
               chr16:22984993-22984822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               538-655
               

               Cow position:
               chr16:25610266-25610148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               542-708
               

               Cow position:
               chr16:34998387-34998565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               545-660
               

               Cow position:
               chr16:30054867-30054983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               546-664
               

               Cow position:
               chr16:39010656-39010774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               39, 114
               

               Conread position:
               547-701
               

               Cow position:
               chr16:7542516-7542365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               34, 6
               

               Conread position:
               548-659
               

               Cow position:
               chr16:7583629-7583516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 11
               

               Conread position:
               548-701
               

               Cow position:
               chr16:7665871-7665705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               552-708
               

               Cow position:
               chr16:18572830-18572993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               114, 149
               

               Conread position:
               553-657
               

               Cow position:
               chr16:50010961-50011068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               553-701
               

               Cow position:
               chr16:4911228-4911378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               101, 25
               

               Conread position:
               553-701
               

               Cow position:
               chr16:14210557-14210713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               554-669
               

               Cow position:
               chr16:38581229-38581113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               555-668
               

               Cow position:
               chr16:8090305-8090420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr16:10033091-10032973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               555-700
               

               Cow position:
               chr16:8025649-8025786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               555-700
               

               Cow position:
               chr16:18206179-18206028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr16:38663483-38663650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               556-660
               

               Cow position:
               chr16:38852582-38852684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-660
               

               Cow position:
               chr16:54693000-54692896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               556-669
               

               Cow position:
               chr16:17209080-17209196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               556-703
               

               Cow position:
               chr16:41115772-41115925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               104, 128
               

               Conread position:
               557-660
               

               Cow position:
               chr16:56615280-56615385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               557-670
               

               Cow position:
               chr16:48455895-48455782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 54
               

               Conread position:
               557-701
               

               Cow position:
               chr16:19756557-19756709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               559-699
               

               Cow position:
               chr16:4102628-4102761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               560-652
               

               Cow position:
               chr16:4077823-4077917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr16:9097242-9097134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr16:29038134-29038025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               561-701
               

               Cow position:
               chr16:11620395-11620530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr16:8809881-8810033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr16:10148485-10148343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 100
               

               Conread position:
               561-708
               

               Cow position:
               chr16:20664328-20664171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr16:31559120-31558962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               562-658
               

               Cow position:
               chr16:46548045-46548143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               562-670
               

               Cow position:
               chr16:33073669-33073777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               562-700
               

               Cow position:
               chr16:4062570-4062712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               562-700
               

               Cow position:
               chr16:30646725-30646581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               563-660
               

               Cow position:
               chr16:47835134-47835036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               563-664
               

               Cow position:
               chr16:47303897-47303999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr16:11634887-11634779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               564-658
               

               Cow position:
               chr16:8953459-8953555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               564-669
               

               Cow position:
               chr16:21442394-21442500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               564-708
               

               Cow position:
               chr16:33290602-33290445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               564-708
               

               Cow position:
               chr16:49252353-49252495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               565-659
               

               Cow position:
               chr16:29311742-29311646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               565-660
               

               Cow position:
               chr16:42217443-42217540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               565-669
               

               Cow position:
               chr16:19245344-19245450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               566-659
               

               Cow position:
               chr16:12091440-12091534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               566-660
               

               Cow position:
               chr16:24635999-24636093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               80
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               566-669
               

               Cow position:
               chr16:10249604-10249708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               566-678
               

               Cow position:
               chr16:12292953-12292842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 81
               

               Conread position:
               566-708
               

               Cow position:
               chr16:9596576-9596431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               88, 25
               

               Conread position:
               567-668
               

               Cow position:
               chr16:56595176-56595278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               567-708
               

               Cow position:
               chr16:40029675-40029823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               95, 70
               

               Conread position:
               569-669
               

               Cow position:
               chr16:44568798-44568898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               569-699
               

               Cow position:
               chr16:52274927-52275059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               91, 109
               

               Conread position:
               571-660
               

               Cow position:
               chr16:47633080-47632991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               77
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               571-668
               

               Cow position:
               chr16:15714318-15714221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               571-708
               

               Cow position:
               chr16:17283644-17283508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               576-669
               

               Cow position:
               chr16:7441899-7441992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               79
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-668
               

               Cow position:
               chr16:27004072-27003985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               80
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               578-669
               

               Cow position:
               chr16:24672661-24672752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-697
               

               Cow position:
               chr16:11083195-11083069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr16:7928183-7928324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr16:50931334-50931464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               113, 93
               

               Conread position:
               590-701
               

               Cow position:
               chr16:14568304-14568421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               527-669
               

               Cow position:
               chr17:44797970-44797827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               16, 36
               

               Conread position:
               529-708
               

               Cow position:
               chr17:3388007-3387818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               52, 19
               

               Conread position:
               543-707
               

               Cow position:
               chr17:23257438-23257601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 111
               

               Conread position:
               547-669
               

               Cow position:
               chr17:21236795-21236673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               548-708
               

               Cow position:
               chr17:36814639-36814462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               549-669
               

               Cow position:
               chr17:25118153-25118034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               115, 28
               

               Conread position:
               549-708
               

               Cow position:
               chr17:26880273-26880434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 105
               

               Conread position:
               550-667
               

               Cow position:
               chr17:18146459-18146340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 9
               

               Conread position:
               551-668
               

               Cow position:
               chr17:26225291-26225177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               551-708
               

               Cow position:
               chr17:12306132-12306296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               553-669
               

               Cow position:
               chr17:6787203-6787088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               554-669
               

               Cow position:
               chr17:4271094-4271211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-645
               

               Cow position:
               chr17:10803366-10803276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               77
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-656
               

               Cow position:
               chr17:31624998-31625099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-663
               

               Cow position:
               chr17:1875703-1875814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               555-667
               

               Cow position:
               chr17:26448805-26448692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr17:7659335-7659448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr17:11618853-11618735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr17:18673775-18673939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr17:36943626-36943469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               556-669
               

               Cow position:
               chr17:20929504-20929392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               556-670
               

               Cow position:
               chr17:27795918-27795802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               556-708
               

               Cow position:
               chr17:1469631-1469476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 101
               

               Conread position:
               558-660
               

               Cow position:
               chr17:10238017-10237915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               83
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               559-645
               

               Cow position:
               chr17:12269428-12269516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               78
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               559-659
               

               Cow position:
               chr17:26231224-26231123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               559-682
               

               Cow position:
               chr17:20856259-20856384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               559-708
               

               Cow position:
               chr17:15355194-15355032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               560-706
               

               Cow position:
               chr17:5761892-5762051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               560-706
               

               Cow position:
               chr17:22048501-22048647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               560-708
               

               Cow position:
               chr17:12289153-12289308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               101, 44
               

               Conread position:
               560-708
               

               Cow position:
               chr17:12946102-12946251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               560-708
               

               Cow position:
               chr17:18720195-18720345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 68
               

               Conread position:
               561-645
               

               Cow position:
               chr17:23056693-23056607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               87
               

               Alignm identity:
               77
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-660
               

               Cow position:
               chr17:12958153-12958254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-662
               

               Cow position:
               chr17:9119807-9119908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr17:32027190-32027301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr17:43323286-43323394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr17:6761596-6761747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 121
               

               Conread position:
               562-658
               

               Cow position:
               chr17:21718742-21718838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               562-669
               

               Cow position:
               chr17:39964135-39964026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               562-700
               

               Cow position:
               chr17:28982433-28982288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               562-708
               

               Cow position:
               chr17:3364844-3364691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               563-700
               

               Cow position:
               chr17:20157862-20157716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               563-708
               

               Cow position:
               chr17:30108686-30108540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 81
               

               Conread position:
               564-666
               

               Cow position:
               chr17:21466003-21466107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               564-701
               

               Cow position:
               chr17:19471517-19471663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               567-669
               

               Cow position:
               chr17:15883927-15883823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               567-700
               

               Cow position:
               chr17:7865075-7864933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               568-669
               

               Cow position:
               chr17:12248982-12249085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               568-679
               

               Cow position:
               chr17:30141988-30141876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               570-701
               

               Cow position:
               chr17:10414739-10414606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               86, 13
               

               Conread position:
               571-700
               

               Cow position:
               chr17:24612891-24612759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               572-669
               

               Cow position:
               chr17:11920916-11921014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               578-659
               

               Cow position:
               chr17:4817769-4817688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               73
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-659
               

               Cow position:
               chr17:25718382-25718301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               74
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-701
               

               Cow position:
               chr17:32978698-32978825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr17:10630742-10630882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               579-708
               

               Cow position:
               chr17:18818800-18818668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 51
               

               Conread position:
               580-699
               

               Cow position:
               chr17:11055930-11056055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               589-700
               

               Cow position:
               chr17:38736659-38736547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 88
               

               Conread position:
               541-708
               

               Cow position:
               chr18:19831777-19831609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               545-669
               

               Cow position:
               chr18:55693017-55692893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               36, 93
               

               Conread position:
               545-708
               

               Cow position:
               chr18:32253303-32253483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               547-669
               

               Cow position:
               chr18:26354850-26354967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               548-708
               

               Cow position:
               chr18:5189495-5189666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 83
               

               Conread position:
               550-669
               

               Cow position:
               chr18:19868065-19868184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               550-700
               

               Cow position:
               chr18:21050897-21051048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               101, 11
               

               Conread position:
               550-700
               

               Cow position:
               chr18:42967297-42967147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               109, 61
               

               Conread position:
               551-660
               

               Cow position:
               chr18:50224244-50224131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 78
               

               Conread position:
               553-669
               

               Cow position:
               chr18:31556965-31557083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               553-700
               

               Cow position:
               chr18:22045219-22045379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               554-683
               

               Cow position:
               chr18:29264176-29264308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               555-660
               

               Cow position:
               chr18:44514280-44514173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr18:29945725-29945613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 54
               

               Conread position:
               555-700
               

               Cow position:
               chr18:33492535-33492395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               555-701
               

               Cow position:
               chr18:39811396-39811549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 23
               

               Conread position:
               555-708
               

               Cow position:
               chr18:37690340-37690177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               556-669
               

               Cow position:
               chr18:11233609-11233493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               556-708
               

               Cow position:
               chr18:33364401-33364239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               558-670
               

               Cow position:
               chr18:39860592-39860705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               558-708
               

               Cow position:
               chr18:35827193-35827347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               102, 50
               

               Conread position:
               559-651
               

               Cow position:
               chr18:35887544-35887452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               559-700
               

               Cow position:
               chr18:2144756-2144606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-700
               

               Cow position:
               chr18:10576288-10576146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               20, 109
               

               Conread position:
               559-700
               

               Cow position:
               chr18:31672335-31672478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               560-708
               

               Cow position:
               chr18:29091912-29091765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 112
               

               Conread position:
               561-669
               

               Cow position:
               chr18:20391390-20391280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-700
               

               Cow position:
               chr18:19849587-19849722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               21, 94
               

               Conread position:
               561-701
               

               Cow position:
               chr18:51395712-51395851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               561-707
               

               Cow position:
               chr18:14871421-14871577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr18:21751564-21751405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr18:36098542-36098393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr18:52251672-52251830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               562-669
               

               Cow position:
               chr18:21528831-21528724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               563-657
               

               Cow position:
               chr18:45573563-45573469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 85
               

               Conread position:
               563-669
               

               Cow position:
               chr18:32960262-32960154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 97
               

               Conread position:
               563-698
               

               Cow position:
               chr18:10214011-10214153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               564-669
               

               Cow position:
               chr18:7965413-7965306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               564-669
               

               Cow position:
               chr18:23026849-23026955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               564-708
               

               Cow position:
               chr18:18569157-18569020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               565-669
               

               Cow position:
               chr18:697041-697145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               565-669
               

               Cow position:
               chr18:27079046-27078941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               566-696
               

               Cow position:
               chr18:40356766-40356896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               16, 120
               

               Conread position:
               566-701
               

               Cow position:
               chr18:17195167-17195311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               566-708
               

               Cow position:
               chr18:44909229-44909081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               95, 144
               

               Conread position:
               567-669
               

               Cow position:
               chr18:37160424-37160524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               567-701
               

               Cow position:
               chr18:5632442-5632302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               568-700
               

               Cow position:
               chr18:50359502-50359367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               571-669
               

               Cow position:
               chr18:39662953-39662855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               572-699
               

               Cow position:
               chr18:47868767-47868641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               576-708
               

               Cow position:
               chr18:42427783-42427647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               578-669
               

               Cow position:
               chr18:16659263-16659354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               580-706
               

               Cow position:
               chr18:20317900-20318021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               588-701
               

               Cow position:
               chr18:40047349-40047466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               78, 71
               

               Conread position:
               590-708
               

               Cow position:
               chr18:3066488-3066371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               545-645
               

               Cow position:
               chr19:26173395-26173294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               545-669
               

               Cow position:
               chr19:55590460-55590331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               546-708
               

               Cow position:
               chr19:55247850-55247680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               58, 31
               

               Conread position:
               550-669
               

               Cow position:
               chr19:2322121-2322000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               550-669
               

               Cow position:
               chr19:42217096-42217215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 93
               

               Conread position:
               551-701
               

               Cow position:
               chr19:50975606-50975762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               553-701
               

               Cow position:
               chr19:39795401-39795246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               554-708
               

               Cow position:
               chr19:2068475-2068316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               26, 7
               

               Conread position:
               555-669
               

               Cow position:
               chr19:30227733-30227619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               22, 41
               

               Conread position:
               555-669
               

               Cow position:
               chr19:38411078-38410967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               555-685
               

               Cow position:
               chr19:19074036-19073906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 117
               

               Conread position:
               555-708
               

               Cow position:
               chr19:13121076-13121234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               111, 104
               

               Conread position:
               555-708
               

               Cow position:
               chr19:36845456-36845299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr19:54105667-54105502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 6
               

               Conread position:
               558-669
               

               Cow position:
               chr19:4264027-4264135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               558-669
               

               Cow position:
               chr19:24068072-24068185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               558-670
               

               Cow position:
               chr19:729541-729650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               558-708
               

               Cow position:
               chr19:4586342-4586498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               558-708
               

               Cow position:
               chr19:8185414-8185252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               559-701
               

               Cow position:
               chr19:42575354-42575210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               559-708
               

               Cow position:
               chr19:37406123-37405967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 53
               

               Conread position:
               560-676
               

               Cow position:
               chr19:17355065-17354948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               561-660
               

               Cow position:
               chr19:52461159-52461258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               561-700
               

               Cow position:
               chr19:49959074-49958927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               561-701
               

               Cow position:
               chr19:10755506-10755358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               562-701
               

               Cow position:
               chr19:20378830-20378976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               562-708
               

               Cow position:
               chr19:13325293-13325436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               20, 89
               

               Conread position:
               563-700
               

               Cow position:
               chr19:31319357-31319218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               103, 19
               

               Conread position:
               563-700
               

               Cow position:
               chr19:43413982-43413840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               564-649
               

               Cow position:
               chr19:41605094-41605009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               564-669
               

               Cow position:
               chr19:7794853-7794746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               564-705
               

               Cow position:
               chr19:2137627-2137773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               565-700
               

               Cow position:
               chr19:41188036-41187896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               566-708
               

               Cow position:
               chr19:7594955-7595103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               567-659
               

               Cow position:
               chr19:54919590-54919683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               567-668
               

               Cow position:
               chr19:2220874-2220975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               567-708
               

               Cow position:
               chr19:34166563-34166416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               90, 19
               

               Conread position:
               569-659
               

               Cow position:
               chr19:7558742-7558652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               78
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               569-668
               

               Cow position:
               chr19:33610087-33609987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               569-670
               

               Cow position:
               chr19:5912758-5912863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               570-708
               

               Cow position:
               chr19:5521961-5522106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               14, 91
               

               Conread position:
               571-701
               

               Cow position:
               chr19:13267012-13267142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               87, 101
               

               Conread position:
               573-700
               

               Cow position:
               chr19:24220314-24220450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               578-700
               

               Cow position:
               chr19:37067320-37067197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               578-706
               

               Cow position:
               chr19:29139392-29139253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr19:25582489-25582354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               587-708
               

               Cow position:
               chr19:4459264-4459391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               588-669
               

               Cow position:
               chr19:33978650-33978731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               73
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               588-700
               

               Cow position:
               chr19:6854109-6854222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 22
               

               Conread position:
               527-708
               

               Cow position:
               chr2:39566444-39566633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               530-700
               

               Cow position:
               chr2:47879484-47879310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               539-660
               

               Cow position:
               chr2:72003708-72003833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               40, 14
               

               Conread position:
               547-668
               

               Cow position:
               chr2:39187600-39187479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 115
               

               Conread position:
               548-700
               

               Cow position:
               chr2:63568937-63568779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               113, 12
               

               Conread position:
               549-660
               

               Cow position:
               chr2:24116856-24116967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               549-708
               

               Cow position:
               chr2:46614631-46614462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 43
               

               Conread position:
               550-669
               

               Cow position:
               chr2:36124660-36124541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               32, 5
               

               Conread position:
               550-669
               

               Cow position:
               chr2:44022577-44022695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               550-669
               

               Cow position:
               chr2:67810813-67810932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               32, 9
               

               Conread position:
               550-704
               

               Cow position:
               chr2:28452723-28452880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               108, 28
               

               Conread position:
               551-698
               

               Cow position:
               chr2:39371640-39371486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 61
               

               Conread position:
               553-669
               

               Cow position:
               chr2:2486071-2485952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               553-704
               

               Cow position:
               chr2:44215724-44215566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               554-669
               

               Cow position:
               chr2:15348619-15348504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-707
               

               Cow position:
               chr2:43990996-43990834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               555-660
               

               Cow position:
               chr2:29806157-29806053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr2:29394785-29394898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               555-671
               

               Cow position:
               chr2:34557858-34557743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               555-675
               

               Cow position:
               chr2:39864653-39864528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               555-700
               

               Cow position:
               chr2:52484743-52484891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               100, 59
               

               Conread position:
               555-701
               

               Cow position:
               chr2:13013297-13013158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               556-648
               

               Cow position:
               chr2:77990071-77989979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               556-652
               

               Cow position:
               chr2:15720853-15720756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-660
               

               Cow position:
               chr2:16751654-16751759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               25, 5
               

               Conread position:
               557-669
               

               Cow position:
               chr2:72315590-72315704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               558-669
               

               Cow position:
               chr2:34643487-34643377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               558-671
               

               Cow position:
               chr2:23713093-23712980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               558-701
               

               Cow position:
               chr2:16847405-16847249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               559-658
               

               Cow position:
               chr2:35935111-35935008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               559-659
               

               Cow position:
               chr2:28820590-28820489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-668
               

               Cow position:
               chr2:60181806-60181920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr2:38683279-38683390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr2:49428602-49428492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               560-659
               

               Cow position:
               chr2:10628315-10628414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               560-660
               

               Cow position:
               chr2:29551100-29551202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               560-669
               

               Cow position:
               chr2:14826496-14826387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               560-669
               

               Cow position:
               chr2:56350695-56350806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               560-669
               

               Cow position:
               chr2:73789618-73789727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               560-704
               

               Cow position:
               chr2:77295242-77295096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               561-667
               

               Cow position:
               chr2:69937609-69937502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr2:15734633-15734527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr2:25922628-25922520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               20, 71
               

               Conread position:
               561-669
               

               Cow position:
               chr2:42897886-42897776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr2:67302236-67302126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr2:69003260-69003109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 54
               

               Conread position:
               562-668
               

               Cow position:
               chr2:22759757-22759866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               562-669
               

               Cow position:
               chr2:9725885-9725992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               562-669
               

               Cow position:
               chr2:57007132-57007025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               562-700
               

               Cow position:
               chr2:44051523-44051377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               562-701
               

               Cow position:
               chr2:56021532-56021379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               562-706
               

               Cow position:
               chr2:19211846-19211992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               104, 65
               

               Conread position:
               563-663
               

               Cow position:
               chr2:46019402-46019502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               563-708
               

               Cow position:
               chr2:3728238-3728087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               564-667
               

               Cow position:
               chr2:1741951-1741848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               564-669
               

               Cow position:
               chr2:59396838-59396943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               564-708
               

               Cow position:
               chr2:6039228-6039074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 125
               

               Conread position:
               564-708
               

               Cow position:
               chr2:13369871-13369715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               564-708
               

               Cow position:
               chr2:44313503-44313658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               565-708
               

               Cow position:
               chr2:39229020-39228871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               565-708
               

               Cow position:
               chr2:56010943-56011085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               566-660
               

               Cow position:
               chr2:28751410-28751314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               567-708
               

               Cow position:
               chr2:55004493-55004348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               568-669
               

               Cow position:
               chr2:23935603-23935502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               83
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               570-708
               

               Cow position:
               chr2:64810-64945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               571-708
               

               Cow position:
               chr2:65603432-65603574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               572-669
               

               Cow position:
               chr2:5300804-5300706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               576-684
               

               Cow position:
               chr2:65059244-65059138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               576-704
               

               Cow position:
               chr2:15058861-15058999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               578-665
               

               Cow position:
               chr2:38969286-38969373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-697
               

               Cow position:
               chr2:80177399-80177519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               578-700
               

               Cow position:
               chr2:1036188-1036320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               578-700
               

               Cow position:
               chr2:24271413-24271287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               578-700
               

               Cow position:
               chr2:74964647-74964529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               86, 59
               

               Conread position:
               578-701
               

               Cow position:
               chr2:12873606-12873479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               579-659
               

               Cow position:
               chr2:9687323-9687403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               81
               

               Alignm identity:
               73
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               580-669
               

               Cow position:
               chr2:26635273-26635362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               77
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               580-669
               

               Cow position:
               chr2:49716889-49716978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               77
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               589-699
               

               Cow position:
               chr2:39815108-39815214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               525-700
               

               Cow position:
               chr20:21941717-21941545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               528-708
               

               Cow position:
               chr20:14755558-14755737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               130, 23
               

               Conread position:
               532-708
               

               Cow position:
               chr20:3141860-3141677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               134, 17
               

               Conread position:
               545-669
               

               Cow position:
               chr20:23384574-23384445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               547-708
               

               Cow position:
               chr20:14490516-14490349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 53
               

               Conread position:
               548-669
               

               Cow position:
               chr20:25021701-25021581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               549-708
               

               Cow position:
               chr20:13023231-13023399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               553-668
               

               Cow position:
               chr20:36366086-36365970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               553-669
               

               Cow position:
               chr20:29990181-29990295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               553-700
               

               Cow position:
               chr20:27315241-27315089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               107, 28
               

               Conread position:
               554-669
               

               Cow position:
               chr20:18500797-18500680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr20:6054246-6054356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr20:10200611-10200499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               555-684
               

               Cow position:
               chr20:32237430-32237557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr20:4755570-4755729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               106, 155
               

               Conread position:
               555-708
               

               Cow position:
               chr20:17733291-17733456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr20:21018686-21018528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               99, 154
               

               Conread position:
               555-708
               

               Cow position:
               chr20:32636067-32636227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr20:37273259-37273101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               558-699
               

               Cow position:
               chr20:19622981-19623132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               558-700
               

               Cow position:
               chr20:21169507-21169651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               24, 96
               

               Conread position:
               559-658
               

               Cow position:
               chr20:28935381-28935481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr20:14433159-14433270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               559-670
               

               Cow position:
               chr20:10486096-10486207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               559-700
               

               Cow position:
               chr20:35605461-35605318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               86, 18
               

               Conread position:
               561-660
               

               Cow position:
               chr20:24883101-24883201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-700
               

               Cow position:
               chr20:37919118-37919259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               97, 48
               

               Conread position:
               561-707
               

               Cow position:
               chr20:37609881-37609724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr20:7934538-7934385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               22, 70
               

               Conread position:
               561-708
               

               Cow position:
               chr20:34097688-34097850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               563-699
               

               Cow position:
               chr20:13034076-13034218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               563-700
               

               Cow position:
               chr20:11499256-11499119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               91, 19
               

               Conread position:
               564-708
               

               Cow position:
               chr20:26424664-26424509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               566-669
               

               Cow position:
               chr20:20892421-20892525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               567-708
               

               Cow position:
               chr20:4944995-4945151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               567-708
               

               Cow position:
               chr20:19201786-19201634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               568-699
               

               Cow position:
               chr20:14759423-14759553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               569-708
               

               Cow position:
               chr20:31845035-31845182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 91
               

               Conread position:
               571-667
               

               Cow position:
               chr20:36097773-36097675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               571-701
               

               Cow position:
               chr20:19919570-19919705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               572-667
               

               Cow position:
               chr20:21210275-21210181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               572-708
               

               Cow position:
               chr20:1824383-1824525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               572-708
               

               Cow position:
               chr20:29755027-29754879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               576-701
               

               Cow position:
               chr20:31148394-31148268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               578-669
               

               Cow position:
               chr20:9730245-9730154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               79
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr20:35442041-35442179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 5
               

               Conread position:
               583-667
               

               Cow position:
               chr20:26054988-26055072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               75
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               587-700
               

               Cow position:
               chr20:16566521-16566408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               69, 89
               

               Conread position:
               588-708
               

               Cow position:
               chr20:4334307-4334427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               76, 65
               

               Conread position:
               519-708
               

               Cow position:
               chr21:30217891-30218081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               36, 11
               

               Conread position:
               539-700
               

               Cow position:
               chr21:23348298-23348458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 99
               

               Conread position:
               540-660
               

               Cow position:
               chr21:16954431-16954314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               545-700
               

               Cow position:
               chr21:6713232-6713391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               23, 41
               

               Conread position:
               545-708
               

               Cow position:
               chr21:29658567-29658399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               118, 37
               

               Conread position:
               547-669
               

               Cow position:
               chr21:41829086-41829207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               549-669
               

               Cow position:
               chr21:14464875-14464757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               549-700
               

               Cow position:
               chr21:18495503-18495353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               108, 11
               

               Conread position:
               550-700
               

               Cow position:
               chr21:15543949-15544097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               114, 61
               

               Conread position:
               551-708
               

               Cow position:
               chr21:938309-938143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               92, 8
               

               Conread position:
               551-708
               

               Cow position:
               chr21:10004591-10004762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               552-669
               

               Cow position:
               chr21:27677768-27677654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               552-701
               

               Cow position:
               chr21:24757225-24757071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               114, 107
               

               Conread position:
               553-651
               

               Cow position:
               chr21:48521295-48521200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               554-671
               

               Cow position:
               chr21:45537476-45537357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               554-699
               

               Cow position:
               chr21:20185531-20185381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               108, 23
               

               Conread position:
               554-708
               

               Cow position:
               chr21:27521051-27521216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               7, 47
               

               Conread position:
               555-659
               

               Cow position:
               chr21:8333972-8334074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               555-659
               

               Cow position:
               chr21:43336563-43336666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr21:8430810-8430926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr21:38440720-38440607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr21:42227414-42227525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-697
               

               Cow position:
               chr21:20174597-20174453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               82, 99
               

               Conread position:
               555-701
               

               Cow position:
               chr21:3135580-3135738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 59
               

               Conread position:
               555-704
               

               Cow position:
               chr21:30359063-30359219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr21:22718498-22718659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               105, 74
               

               Conread position:
               555-708
               

               Cow position:
               chr21:38918488-38918322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               27, 5
               

               Conread position:
               556-669
               

               Cow position:
               chr21:12349052-12348938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               556-669
               

               Cow position:
               chr21:30231409-30231525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               556-701
               

               Cow position:
               chr21:42189475-42189625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-708
               

               Cow position:
               chr21:5218992-5218833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               557-701
               

               Cow position:
               chr21:45970893-45971043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               558-669
               

               Cow position:
               chr21:10656817-10656930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               559-660
               

               Cow position:
               chr21:18450038-18449935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr21:34209733-34209842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               559-700
               

               Cow position:
               chr21:38901044-38900905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               559-708
               

               Cow position:
               chr21:44829475-44829635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               560-651
               

               Cow position:
               chr21:16797133-16797044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               82
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               560-699
               

               Cow position:
               chr21:44724092-44724240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               560-708
               

               Cow position:
               chr21:28882463-28882305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr21:13656353-13656463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr21:31652668-31652558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr21:41216839-41216731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               561-701
               

               Cow position:
               chr21:27863238-27863382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               562-668
               

               Cow position:
               chr21:8713677-8713785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               562-699
               

               Cow position:
               chr21:16895686-16895544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 52
               

               Conread position:
               563-708
               

               Cow position:
               chr21:41156150-41155994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               564-684
               

               Cow position:
               chr21:29011703-29011825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               565-668
               

               Cow position:
               chr21:6292024-6291921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               565-670
               

               Cow position:
               chr21:868644-868752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               565-670
               

               Cow position:
               chr21:42501327-42501222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               565-708
               

               Cow position:
               chr21:21145665-21145521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 108
               

               Conread position:
               565-708
               

               Cow position:
               chr21:28244743-28244594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               565-708
               

               Cow position:
               chr21:30976992-30977139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 112
               

               Conread position:
               566-659
               

               Cow position:
               chr21:32813039-32812944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               568-700
               

               Cow position:
               chr21:11678050-11678180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               568-708
               

               Cow position:
               chr21:745444-745299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               14, 93
               

               Conread position:
               568-708
               

               Cow position:
               chr21:36879610-36879748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               14, 86
               

               Conread position:
               569-706
               

               Cow position:
               chr21:37706138-37706289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               569-708
               

               Cow position:
               chr21:21907170-21907310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               570-708
               

               Cow position:
               chr21:32536661-32536520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               571-697
               

               Cow position:
               chr21:3236771-3236645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               105, 10
               

               Conread position:
               571-708
               

               Cow position:
               chr21:40571202-40571342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               77, 122
               

               Conread position:
               572-700
               

               Cow position:
               chr21:30848680-30848809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 106
               

               Conread position:
               573-700
               

               Cow position:
               chr21:23587139-23587014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               576-669
               

               Cow position:
               chr21:10264300-10264206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               80
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               576-700
               

               Cow position:
               chr21:48482266-48482398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr21:17890565-17890426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               580-708
               

               Cow position:
               chr21:29014657-29014787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               583-669
               

               Cow position:
               chr21:15444825-15444911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               87
               

               Alignm identity:
               76
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               536-708
               

               Cow position:
               chr22:25690036-25690218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               542-708
               

               Cow position:
               chr22:30687250-30687083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               545-708
               

               Cow position:
               chr22:6754034-6754209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               547-708
               

               Cow position:
               chr22:1991832-1991656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               548-701
               

               Cow position:
               chr22:1552124-1551965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               549-701
               

               Cow position:
               chr22:36539437-36539588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               105, 31
               

               Conread position:
               549-708
               

               Cow position:
               chr22:5016714-5016553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               33, 6
               

               Conread position:
               550-669
               

               Cow position:
               chr22:3430418-3430297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               550-669
               

               Cow position:
               chr22:14641632-14641752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               551-693
               

               Cow position:
               chr22:28732471-28732330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               127, 35
               

               Conread position:
               552-668
               

               Cow position:
               chr22:18301821-18301937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               552-669
               

               Cow position:
               chr22:7496884-7497003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               553-660
               

               Cow position:
               chr22:6622030-6622135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               5, 57
               

               Conread position:
               553-669
               

               Cow position:
               chr22:12188258-12188370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               553-669
               

               Cow position:
               chr22:12195344-12195456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               553-671
               

               Cow position:
               chr22:27577967-27577847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               553-708
               

               Cow position:
               chr22:33447861-33448024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               101, 8
               

               Conread position:
               553-708
               

               Cow position:
               chr22:40387373-40387209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               554-708
               

               Cow position:
               chr22:4075666-4075829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr22:1045966-1046084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr22:14488158-14488042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr22:28290563-28290447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-683
               

               Cow position:
               chr22:9075629-9075502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 117
               

               Conread position:
               555-700
               

               Cow position:
               chr22:530360-530513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               555-700
               

               Cow position:
               chr22:12678205-12678357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               95, 22
               

               Conread position:
               555-708
               

               Cow position:
               chr22:15567804-15567959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr22:41044691-41044842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr22:47820659-47820495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               556-652
               

               Cow position:
               chr22:14142907-14143003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               556-669
               

               Cow position:
               chr22:26112587-26112471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-708
               

               Cow position:
               chr22:11836859-11837007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               557-669
               

               Cow position:
               chr22:1953370-1953260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               557-669
               

               Cow position:
               chr22:19413815-19413930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               557-669
               

               Cow position:
               chr22:23265429-23265545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               557-685
               

               Cow position:
               chr22:45801078-45800949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 116
               

               Conread position:
               557-686
               

               Cow position:
               chr22:29345803-29345668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               557-701
               

               Cow position:
               chr22:42685097-42684955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               101, 21
               

               Conread position:
               558-661
               

               Cow position:
               chr22:11211480-11211581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               558-708
               

               Cow position:
               chr22:8287395-8287240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               559-659
               

               Cow position:
               chr22:5375612-5375509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               559-660
               

               Cow position:
               chr22:25291699-25291598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr22:25312731-25312616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-701
               

               Cow position:
               chr22:23630141-23630288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 55
               

               Conread position:
               560-671
               

               Cow position:
               chr22:39602499-39602387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr22:19306115-19306005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr22:35215765-35215655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-699
               

               Cow position:
               chr22:27681940-27681787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               561-700
               

               Cow position:
               chr22:12777172-12777312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr22:11790199-11790040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr22:25247122-25246969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr22:39446508-39446348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               562-669
               

               Cow position:
               chr22:7140860-7140751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               562-699
               

               Cow position:
               chr22:8733135-8733271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               562-700
               

               Cow position:
               chr22:37202059-37201914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               562-707
               

               Cow position:
               chr22:12673119-12673277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               562-707
               

               Cow position:
               chr22:44410924-44410779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               99, 20
               

               Conread position:
               562-708
               

               Cow position:
               chr22:12637814-12637657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               563-708
               

               Cow position:
               chr22:3540910-3541061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               97, 45
               

               Conread position:
               564-701
               

               Cow position:
               chr22:7913663-7913525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               90, 109
               

               Conread position:
               564-708
               

               Cow position:
               chr22:16291722-16291867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               18, 109
               

               Conread position:
               564-708
               

               Cow position:
               chr22:25809070-25809220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               565-700
               

               Cow position:
               chr22:4583769-4583627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               565-708
               

               Cow position:
               chr22:1588503-1588351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               566-708
               

               Cow position:
               chr22:9983616-9983771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               567-660
               

               Cow position:
               chr22:13695081-13695174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               79
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               567-668
               

               Cow position:
               chr22:1849281-1849180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               567-695
               

               Cow position:
               chr22:14178626-14178757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               567-700
               

               Cow position:
               chr22:8090328-8090467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               568-660
               

               Cow position:
               chr22:35665665-35665759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               568-697
               

               Cow position:
               chr22:2704504-2704366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               569-669
               

               Cow position:
               chr22:5837465-5837365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               569-670
               

               Cow position:
               chr22:16797629-16797730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               571-665
               

               Cow position:
               chr22:30176741-30176647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               79
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               573-670
               

               Cow position:
               chr22:12389302-12389204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               573-701
               

               Cow position:
               chr22:44642444-44642313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               85, 9
               

               Conread position:
               576-708
               

               Cow position:
               chr22:24583875-24584013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               580-659
               

               Cow position:
               chr22:13866861-13866782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               80
               

               Alignm identity:
               72
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               587-708
               

               Cow position:
               chr22:2876612-2876741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               589-708
               

               Cow position:
               chr22:6793696-6793817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               518-661
               

               Cow position:
               chr23:40494592-40494449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 33
               

               Conread position:
               537-669
               

               Cow position:
               chr23:15099679-15099816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               542-708
               

               Cow position:
               chr23:22205361-22205528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               40, 13
               

               Conread position:
               547-669
               

               Cow position:
               chr23:41107788-41107909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               547-708
               

               Cow position:
               chr23:40348412-40348582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               549-669
               

               Cow position:
               chr23:30617241-30617366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               551-671
               

               Cow position:
               chr23:4003878-4003757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               552-669
               

               Cow position:
               chr23:27526813-27526696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               552-701
               

               Cow position:
               chr23:16447470-16447619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               102, 25
               

               Conread position:
               552-705
               

               Cow position:
               chr23:3568337-3568493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               553-708
               

               Cow position:
               chr23:307683-307518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               101, 25
               

               Conread position:
               554-669
               

               Cow position:
               chr23:35239577-35239463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 58
               

               Conread position:
               554-708
               

               Cow position:
               chr23:34264525-34264689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               555-668
               

               Cow position:
               chr23:2471229-2471116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr23:32621511-32621398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 28
               

               Conread position:
               555-669
               

               Cow position:
               chr23:40737792-40737905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               555-671
               

               Cow position:
               chr23:7856985-7856870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               555-700
               

               Cow position:
               chr23:1429611-1429755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               110, 25
               

               Conread position:
               555-700
               

               Cow position:
               chr23:15286924-15287066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               24, 95
               

               Conread position:
               555-708
               

               Cow position:
               chr23:4291580-4291417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               106, 23
               

               Conread position:
               556-658
               

               Cow position:
               chr23:22550809-22550708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               556-659
               

               Cow position:
               chr23:13673789-13673893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               557-669
               

               Cow position:
               chr23:4416061-4416175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               560-700
               

               Cow position:
               chr23:24704502-24704361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               77, 49
               

               Conread position:
               561-669
               

               Cow position:
               chr23:10676074-10675964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr23:25726559-25726454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               561-701
               

               Cow position:
               chr23:11369438-11369296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               105, 47
               

               Conread position:
               561-708
               

               Cow position:
               chr23:17462810-17462652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               562-669
               

               Cow position:
               chr23:799449-799556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               562-708
               

               Cow position:
               chr23:40081716-40081575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr23:1337089-1337197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr23:33434881-33434774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               564-700
               

               Cow position:
               chr23:17484643-17484776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               564-700
               

               Cow position:
               chr23:22704791-22704655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               90, 100
               

               Conread position:
               565-708
               

               Cow position:
               chr23:3890356-3890512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               566-708
               

               Cow position:
               chr23:26975252-26975402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               569-669
               

               Cow position:
               chr23:3244705-3244805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               571-708
               

               Cow position:
               chr23:21423972-21423830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               91, 9
               

               Conread position:
               578-659
               

               Cow position:
               chr23:24479722-24479803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               74
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-700
               

               Cow position:
               chr23:18710271-18710388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr23:13137738-13137873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr23:29345576-29345704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               86, 94
               

               Conread position:
               580-669
               

               Cow position:
               chr23:9726340-9726429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               79
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               583-708
               

               Cow position:
               chr23:18739265-18739401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               527-669
               

               Cow position:
               chr24:35210284-35210141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               528-700
               

               Cow position:
               chr24:21834739-21834915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               539-669
               

               Cow position:
               chr24:18324067-18324197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               543-669
               

               Cow position:
               chr24:4634958-4635082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               38, 10
               

               Conread position:
               550-701
               

               Cow position:
               chr24:2358982-2359139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 128
               

               Conread position:
               551-658
               

               Cow position:
               chr24:4717424-4717319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               551-669
               

               Cow position:
               chr24:34301836-34301953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               551-676
               

               Cow position:
               chr24:26042159-26042030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 116
               

               Conread position:
               551-698
               

               Cow position:
               chr24:26588419-26588266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               30, 8
               

               Conread position:
               552-708
               

               Cow position:
               chr24:18702597-18702434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               110, 9
               

               Conread position:
               553-669
               

               Cow position:
               chr24:120719-120834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               553-669
               

               Cow position:
               chr24:28318752-28318868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               110, 6
               

               Conread position:
               553-670
               

               Cow position:
               chr24:18405078-18405197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               554-655
               

               Cow position:
               chr24:18017653-18017550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               554-669
               

               Cow position:
               chr24:25142817-25142700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               554-699
               

               Cow position:
               chr24:6739975-6740128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               555-659
               

               Cow position:
               chr24:18137102-18137207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-659
               

               Cow position:
               chr24:26569656-26569552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               84
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-660
               

               Cow position:
               chr24:885246-885353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               555-668
               

               Cow position:
               chr24:21606476-21606592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr24:12121096-12120982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr24:39910834-39910948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               89
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-696
               

               Cow position:
               chr24:39523254-39523401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               105, 6
               

               Conread position:
               555-706
               

               Cow position:
               chr24:14550989-14550832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 77
               

               Conread position:
               555-708
               

               Cow position:
               chr24:28303164-28303319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               556-669
               

               Cow position:
               chr24:22420161-22420046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               26, 45
               

               Conread position:
               556-708
               

               Cow position:
               chr24:18541260-18541414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 96
               

               Conread position:
               557-698
               

               Cow position:
               chr24:28722076-28721930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               558-669
               

               Cow position:
               chr24:35365513-35365624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               558-708
               

               Cow position:
               chr24:36554505-36554662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               559-708
               

               Cow position:
               chr24:30483749-30483905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               560-697
               

               Cow position:
               chr24:25970892-25971029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               560-700
               

               Cow position:
               chr24:11840376-11840231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               110, 57
               

               Conread position:
               561-701
               

               Cow position:
               chr24:19801032-19800885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr24:390291-390139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               562-700
               

               Cow position:
               chr24:19187122-19186981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               562-700
               

               Cow position:
               chr24:27810339-27810201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               107, 49
               

               Conread position:
               562-708
               

               Cow position:
               chr24:250342-250502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               562-708
               

               Cow position:
               chr24:17308951-17309102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               562-708
               

               Cow position:
               chr24:40592902-40592753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               92, 19
               

               Conread position:
               563-700
               

               Cow position:
               chr24:27844344-27844484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               564-701
               

               Cow position:
               chr24:27040238-27040090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               565-653
               

               Cow position:
               chr24:19624053-19623964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               78
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               565-676
               

               Cow position:
               chr24:26880940-26880831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               565-708
               

               Cow position:
               chr24:19000230-19000083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               566-700
               

               Cow position:
               chr24:27607925-27608062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               568-669
               

               Cow position:
               chr24:22155514-22155413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               568-701
               

               Cow position:
               chr24:43445827-43445971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               568-708
               

               Cow position:
               chr24:18750896-18750743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               571-669
               

               Cow position:
               chr24:38693696-38693793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               576-669
               

               Cow position:
               chr24:18874644-18874737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-660
               

               Cow position:
               chr24:38427936-38428018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               74
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr24:16995052-16994917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               589-708
               

               Cow position:
               chr24:21102562-21102444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               513-700
               

               Cow position:
               chr25:20019720-20019905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 48
               

               Conread position:
               537-659
               

               Cow position:
               chr25:36135879-36135999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               543-659
               

               Cow position:
               chr25:33839995-33839877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               545-659
               

               Cow position:
               chr25:14212596-14212711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               547-701
               

               Cow position:
               chr25:6190119-6190278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               551-660
               

               Cow position:
               chr25:17725260-17725149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               551-701
               

               Cow position:
               chr25:17119969-17119807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               552-669
               

               Cow position:
               chr25:22154254-22154136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               553-659
               

               Cow position:
               chr25:7012948-7012842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               553-661
               

               Cow position:
               chr25:20132879-20132990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               553-700
               

               Cow position:
               chr25:12755272-12755413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               555-651
               

               Cow position:
               chr25:12565168-12565267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr25:18201710-18201821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               555-678
               

               Cow position:
               chr25:19808295-19808415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               555-700
               

               Cow position:
               chr25:11957024-11956870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               555-701
               

               Cow position:
               chr25:20788608-20788758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               556-704
               

               Cow position:
               chr25:36370041-36369880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               556-704
               

               Cow position:
               chr25:36375732-36375571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               557-708
               

               Cow position:
               chr25:26224818-26224971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               558-659
               

               Cow position:
               chr25:22642490-22642388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               558-660
               

               Cow position:
               chr25:25026215-25026315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               558-669
               

               Cow position:
               chr25:19460292-19460181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               558-700
               

               Cow position:
               chr25:2195176-2195316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               109, 19
               

               Conread position:
               559-660
               

               Cow position:
               chr25:26136604-26136706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               559-701
               

               Cow position:
               chr25:18760496-18760643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               559-701
               

               Cow position:
               chr25:28662324-28662175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               562-669
               

               Cow position:
               chr25:36121224-36121117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               564-708
               

               Cow position:
               chr25:33100783-33100633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               565-708
               

               Cow position:
               chr25:12223774-12223629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 89
               

               Conread position:
               566-707
               

               Cow position:
               chr25:28945224-28945079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 45
               

               Conread position:
               566-708
               

               Cow position:
               chr25:24863078-24862933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               16, 109
               

               Conread position:
               568-669
               

               Cow position:
               chr25:5808156-5808053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               569-660
               

               Cow position:
               chr25:21048990-21049083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               569-670
               

               Cow position:
               chr25:18551127-18551229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               569-708
               

               Cow position:
               chr25:33663704-33663847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               570-700
               

               Cow position:
               chr25:28939933-28940075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               573-668
               

               Cow position:
               chr25:32666456-32666358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               573-700
               

               Cow position:
               chr25:21893535-21893404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr25:30462125-30462250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr25:33272834-33272691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               580-701
               

               Cow position:
               chr25:1763278-1763152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               583-697
               

               Cow position:
               chr25:36156002-36155886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               71, 90
               

               Conread position:
               588-701
               

               Cow position:
               chr25:18646766-18646650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               589-708
               

               Cow position:
               chr25:18877419-18877537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               606-708
               

               Cow position:
               chr25:16065050-16064950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               525-660
               

               Cow position:
               chr26:2701718-2701852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               531-669
               

               Cow position:
               chr26:15908501-15908637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               533-669
               

               Cow position:
               chr26:28247112-28246972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               539-707
               

               Cow position:
               chr26:4854795-4854622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               545-669
               

               Cow position:
               chr26:7148048-7148177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               548-700
               

               Cow position:
               chr26:14905575-14905723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               116, 7
               

               Conread position:
               549-669
               

               Cow position:
               chr26:19146150-19146027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               549-671
               

               Cow position:
               chr26:34026792-34026912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               550-660
               

               Cow position:
               chr26:10154868-10154977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               552-700
               

               Cow position:
               chr26:12807062-12807215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 62
               

               Conread position:
               552-701
               

               Cow position:
               chr26:5418283-5418438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               555-670
               

               Cow position:
               chr26:12027999-12028112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr26:27482327-27482489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               105, 27
               

               Conread position:
               555-708
               

               Cow position:
               chr26:33253079-33253239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               559-658
               

               Cow position:
               chr26:5252612-5252713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr26:10764450-10764338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr26:26919771-26919660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr26:32830317-32830207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               559-701
               

               Cow position:
               chr26:20257039-20256898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               25, 41
               

               Conread position:
               561-708
               

               Cow position:
               chr26:19459929-19459770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               563-708
               

               Cow position:
               chr26:5749711-5749861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               564-700
               

               Cow position:
               chr26:26504955-26504822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               89, 15
               

               Conread position:
               566-659
               

               Cow position:
               chr26:25663320-25663415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               568-708
               

               Cow position:
               chr26:25526471-25526326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               569-669
               

               Cow position:
               chr26:31711841-31711941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               569-695
               

               Cow position:
               chr26:10608798-10608668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 15
               

               Conread position:
               569-701
               

               Cow position:
               chr26:9099310-9099448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               570-697
               

               Cow position:
               chr26:35209331-35209454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               578-669
               

               Cow position:
               chr26:35678063-35677972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-699
               

               Cow position:
               chr26:24520887-24521012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               578-700
               

               Cow position:
               chr26:31382529-31382405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               514-700
               

               Cow position:
               chr27:20561287-20561470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               140, 24
               

               Conread position:
               542-659
               

               Cow position:
               chr27:14269605-14269490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               70, 36
               

               Conread position:
               543-669
               

               Cow position:
               chr27:1353301-1353429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               548-708
               

               Cow position:
               chr27:6162672-6162514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               109, 11
               

               Conread position:
               549-671
               

               Cow position:
               chr27:26481468-26481345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               37, 12
               

               Conread position:
               551-708
               

               Cow position:
               chr27:15315254-15315415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 8
               

               Conread position:
               552-660
               

               Cow position:
               chr27:9338256-9338145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               552-669
               

               Cow position:
               chr27:29429008-29428890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               552-669
               

               Cow position:
               chr27:30374849-30374733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               552-670
               

               Cow position:
               chr27:26236062-26236179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               114, 45
               

               Conread position:
               554-657
               

               Cow position:
               chr27:27405336-27405232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               554-701
               

               Cow position:
               chr27:21101554-21101401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               107, 27
               

               Conread position:
               554-701
               

               Cow position:
               chr27:26437388-26437232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-659
               

               Cow position:
               chr27:18688678-18688573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               555-659
               

               Cow position:
               chr27:19823046-19823149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               555-659
               

               Cow position:
               chr27:22708729-22708836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr27:9504285-9504402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-685
               

               Cow position:
               chr27:26613598-26613730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               555-700
               

               Cow position:
               chr27:4944771-4944626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               556-667
               

               Cow position:
               chr27:31479010-31479121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               556-700
               

               Cow position:
               chr27:18791779-18791623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               557-699
               

               Cow position:
               chr27:67973-68113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               31, 81
               

               Conread position:
               558-670
               

               Cow position:
               chr27:28922159-28922045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               558-708
               

               Cow position:
               chr27:15867128-15867286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 104
               

               Conread position:
               559-666
               

               Cow position:
               chr27:16088530-16088637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr27:13181644-13181752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               559-701
               

               Cow position:
               chr27:4411951-4411818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               560-700
               

               Cow position:
               chr27:20749262-20749122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               104, 116
               

               Conread position:
               561-648
               

               Cow position:
               chr27:27270828-27270740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               77
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr27:27438769-27438659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               562-652
               

               Cow position:
               chr27:1789438-1789347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               82
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               562-669
               

               Cow position:
               chr27:23232652-23232761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               563-701
               

               Cow position:
               chr27:11982907-11982756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               564-708
               

               Cow position:
               chr27:15332541-15332401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               565-669
               

               Cow position:
               chr27:27740549-27740444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               566-660
               

               Cow position:
               chr27:16186074-16186168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               80
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               566-700
               

               Cow position:
               chr27:28190442-28190312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               567-658
               

               Cow position:
               chr27:18543733-18543826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               570-708
               

               Cow position:
               chr27:4414065-4413923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               84, 20
               

               Conread position:
               570-708
               

               Cow position:
               chr27:18558107-18558257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               573-708
               

               Cow position:
               chr27:9977439-9977579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               573-708
               

               Cow position:
               chr27:11145635-11145775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               574-663
               

               Cow position:
               chr27:19717652-19717741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               77
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               576-660
               

               Cow position:
               chr27:21978387-21978303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               74
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-699
               

               Cow position:
               chr27:1637168-1637048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr27:11208799-11208658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr27:28932044-28931905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               579-669
               

               Cow position:
               chr27:26467802-26467712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               77
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               580-708
               

               Cow position:
               chr27:20048397-20048530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               86, 79
               

               Conread position:
               580-708
               

               Cow position:
               chr27:28002043-28001916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               585-669
               

               Cow position:
               chr27:23554564-23554480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               74
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               588-701
               

               Cow position:
               chr27:22792607-22792721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               542-670
               

               Cow position:
               chr28:3484825-3484697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 17
               

               Conread position:
               542-670
               

               Cow position:
               chr28:16159634-16159759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               544-701
               

               Cow position:
               chr28:4937003-4937170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               545-652
               

               Cow position:
               chr28:21744946-21744841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               545-669
               

               Cow position:
               chr28:3310982-3311109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               545-708
               

               Cow position:
               chr28:5674108-5673940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               547-669
               

               Cow position:
               chr28:11398560-11398682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               547-685
               

               Cow position:
               chr28:3449540-3449400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               107, 31
               

               Conread position:
               548-675
               

               Cow position:
               chr28:21118910-21118786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               549-708
               

               Cow position:
               chr28:11411306-11411469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               552-669
               

               Cow position:
               chr28:751458-751340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               552-708
               

               Cow position:
               chr28:10615721-10615881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               108, 56
               

               Conread position:
               553-659
               

               Cow position:
               chr28:29500635-29500529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               85
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               553-664
               

               Cow position:
               chr28:10528727-10528841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               553-688
               

               Cow position:
               chr28:21207146-21207282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               5, 106
               

               Conread position:
               553-708
               

               Cow position:
               chr28:3424003-3423842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               108, 24
               

               Conread position:
               554-671
               

               Cow position:
               chr28:117531-117649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               555-655
               

               Cow position:
               chr28:3678585-3678485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-660
               

               Cow position:
               chr28:2892484-2892377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-668
               

               Cow position:
               chr28:19127944-19128059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr28:13356138-13356253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               24, 110
               

               Conread position:
               555-669
               

               Cow position:
               chr28:17620133-17620247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-670
               

               Cow position:
               chr28:6301312-6301195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-700
               

               Cow position:
               chr28:22170057-22170207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               111, 23
               

               Conread position:
               555-708
               

               Cow position:
               chr28:6563665-6563832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr28:10959025-10958867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr28:11866440-11866600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr28:32015012-32014849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-708
               

               Cow position:
               chr28:11059717-11059565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               26, 124
               

               Conread position:
               558-700
               

               Cow position:
               chr28:19564016-19564155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               96, 27
               

               Conread position:
               559-658
               

               Cow position:
               chr28:8347958-8347857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-670
               

               Cow position:
               chr28:4375404-4375516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               559-671
               

               Cow position:
               chr28:118835-118723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 19
               

               Conread position:
               559-699
               

               Cow position:
               chr28:16252182-16252332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-701
               

               Cow position:
               chr28:10606415-10606562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               24, 66
               

               Conread position:
               561-660
               

               Cow position:
               chr28:1654869-1654969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               561-677
               

               Cow position:
               chr28:508187-508073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               561-700
               

               Cow position:
               chr28:17060281-17060139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               561-701
               

               Cow position:
               chr28:16200520-16200671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               562-700
               

               Cow position:
               chr28:19217028-19216894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               562-708
               

               Cow position:
               chr28:27445354-27445508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr28:7644960-7644856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr28:19994728-19994834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               564-668
               

               Cow position:
               chr28:5630316-5630212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               564-705
               

               Cow position:
               chr28:18791253-18791106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               564-708
               

               Cow position:
               chr28:23531081-23530939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               18, 45
               

               Conread position:
               565-660
               

               Cow position:
               chr28:13370922-13371018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               83
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               565-668
               

               Cow position:
               chr28:6124042-6124146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               19, 73
               

               Conread position:
               565-699
               

               Cow position:
               chr28:21008454-21008592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               17, 47
               

               Conread position:
               565-700
               

               Cow position:
               chr28:5428542-5428681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               89, 41
               

               Conread position:
               565-708
               

               Cow position:
               chr28:15362794-15362644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               566-669
               

               Cow position:
               chr28:22278412-22278512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               567-659
               

               Cow position:
               chr28:32203340-32203248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               82
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               567-669
               

               Cow position:
               chr28:5436872-5436974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               567-700
               

               Cow position:
               chr28:3143672-3143805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               87, 14
               

               Conread position:
               567-708
               

               Cow position:
               chr28:12448434-12448294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               567-708
               

               Cow position:
               chr28:26960699-26960844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               568-698
               

               Cow position:
               chr28:19395079-19394943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               569-701
               

               Cow position:
               chr28:3725996-3726137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               572-669
               

               Cow position:
               chr28:11562032-11562131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               573-708
               

               Cow position:
               chr28:12951624-12951482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               575-670
               

               Cow position:
               chr28:5138793-5138889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               576-669
               

               Cow position:
               chr28:8716175-8716268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               576-708
               

               Cow position:
               chr28:4186108-4185971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               576-708
               

               Cow position:
               chr28:16856901-16857042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               577-708
               

               Cow position:
               chr28:21263358-21263222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               578-700
               

               Cow position:
               chr28:5236077-5235954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr28:11346286-11346422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr28:22085343-22085477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 5
               

               Conread position:
               587-700
               

               Cow position:
               chr28:17727918-17728031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               77, 85
               

               Conread position:
               590-708
               

               Cow position:
               chr28:11814888-11815011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               543-708
               

               Cow position:
               chr29:14747009-14746838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               117, 35
               

               Conread position:
               547-660
               

               Cow position:
               chr29:28175888-28175771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               548-660
               

               Cow position:
               chr29:28616946-28616835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               551-708
               

               Cow position:
               chr29:14577082-14576917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               551-708
               

               Cow position:
               chr29:23678924-23678767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               107, 30
               

               Conread position:
               551-708
               

               Cow position:
               chr29:35292306-35292151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               108, 8
               

               Conread position:
               552-698
               

               Cow position:
               chr29:23825882-23825741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               553-669
               

               Cow position:
               chr29:26777233-26777116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               553-669
               

               Cow position:
               chr29:38732377-38732261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               553-672
               

               Cow position:
               chr29:9800882-9800763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 111
               

               Conread position:
               554-669
               

               Cow position:
               chr29:23874685-23874568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               555-698
               

               Cow position:
               chr29:396624-396474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-700
               

               Cow position:
               chr29:22018964-22019121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-701
               

               Cow position:
               chr29:4647992-4648144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               106, 57
               

               Conread position:
               555-705
               

               Cow position:
               chr29:20644139-20643976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               27, 49
               

               Conread position:
               555-706
               

               Cow position:
               chr29:22720425-22720583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-669
               

               Cow position:
               chr29:34483405-34483519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               558-669
               

               Cow position:
               chr29:15947386-15947275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               559-659
               

               Cow position:
               chr29:35281689-35281588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr29:22068526-22068635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr29:28420972-28420863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               559-708
               

               Cow position:
               chr29:38754720-38754879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               560-669
               

               Cow position:
               chr29:32656653-32656542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               561-700
               

               Cow position:
               chr29:34359610-34359755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               562-660
               

               Cow position:
               chr29:33013813-33013715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               562-694
               

               Cow position:
               chr29:16657904-16657768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               562-698
               

               Cow position:
               chr29:18577655-18577514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               562-708
               

               Cow position:
               chr29:25975314-25975463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               562-708
               

               Cow position:
               chr29:26211268-26211110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               563-660
               

               Cow position:
               chr29:6716300-6716397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               565-664
               

               Cow position:
               chr29:31835478-31835380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               565-666
               

               Cow position:
               chr29:35485787-35485687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               566-675
               

               Cow position:
               chr29:4741177-4741289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               567-700
               

               Cow position:
               chr29:31982029-31981897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               567-708
               

               Cow position:
               chr29:14838598-14838743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               567-708
               

               Cow position:
               chr29:16290931-16290784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               99, 64
               

               Conread position:
               567-708
               

               Cow position:
               chr29:24605106-24604954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               572-701
               

               Cow position:
               chr29:23698173-23698043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               95, 34
               

               Conread position:
               573-669
               

               Cow position:
               chr29:17297340-17297244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               574-701
               

               Cow position:
               chr29:8841248-8841380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               578-669
               

               Cow position:
               chr29:9924376-9924467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-699
               

               Cow position:
               chr29:9149353-9149471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr29:5408945-5409083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               579-669
               

               Cow position:
               chr29:24187867-24187957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               77
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               580-708
               

               Cow position:
               chr29:3293138-3293006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               586-696
               

               Cow position:
               chr29:4423261-4423369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 61
               

               Conread position:
               1-563
               

               Cow position:
               chr3:50326019-50326580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               578
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 334
               

               Conread position:
               534-658
               

               Cow position:
               chr3:33285-33412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               534-668
               

               Cow position:
               chr3:22165194-22165331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               536-671
               

               Cow position:
               chr3:79398361-79398226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               544-701
               

               Cow position:
               chr3:53836499-53836664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               547-669
               

               Cow position:
               chr3:79893289-79893413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               548-701
               

               Cow position:
               chr3:5823353-5823500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               124, 30
               

               Conread position:
               549-697
               

               Cow position:
               chr3:65237226-65237071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               549-700
               

               Cow position:
               chr3:55271793-55271948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               105, 27
               

               Conread position:
               550-660
               

               Cow position:
               chr3:32689991-32690103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               551-652
               

               Cow position:
               chr3:43727473-43727369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               551-669
               

               Cow position:
               chr3:5703378-5703259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               551-669
               

               Cow position:
               chr3:76300975-76300857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               552-668
               

               Cow position:
               chr3:55318698-55318814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               552-685
               

               Cow position:
               chr3:41746301-41746430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               552-699
               

               Cow position:
               chr3:83491281-83491130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               553-669
               

               Cow position:
               chr3:42933686-42933566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               553-700
               

               Cow position:
               chr3:59605042-59604887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               553-708
               

               Cow position:
               chr3:9662968-9663136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               555-659
               

               Cow position:
               chr3:75151188-75151293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr3:635373-635262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr3:33460400-33460516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr3:47735416-47735304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr3:72910878-72910992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               23, 5
               

               Conread position:
               555-699
               

               Cow position:
               chr3:11608013-11607866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               6, 28
               

               Conread position:
               555-700
               

               Cow position:
               chr3:10591317-10591460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               90, 28
               

               Conread position:
               555-700
               

               Cow position:
               chr3:18831612-18831469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               99, 23
               

               Conread position:
               555-700
               

               Cow position:
               chr3:65058896-65058742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               555-700
               

               Cow position:
               chr3:70402836-70402687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr3:69849100-69849257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 105
               

               Conread position:
               555-708
               

               Cow position:
               chr3:71238346-71238189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               103, 33
               

               Conread position:
               555-708
               

               Cow position:
               chr3:76168430-76168596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               556-669
               

               Cow position:
               chr3:51150327-51150215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               26, 43
               

               Conread position:
               556-700
               

               Cow position:
               chr3:70333032-70333178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               559-695
               

               Cow position:
               chr3:24584957-24585092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               109, 23
               

               Conread position:
               559-701
               

               Cow position:
               chr3:76056094-76056242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-703
               

               Cow position:
               chr3:40794527-40794669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               559-708
               

               Cow position:
               chr3:31489898-31489756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               561-657
               

               Cow position:
               chr3:1452824-1452921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-660
               

               Cow position:
               chr3:1011683-1011584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr3:48468369-48468259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               561-696
               

               Cow position:
               chr3:58562888-58562746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               101, 23
               

               Conread position:
               561-699
               

               Cow position:
               chr3:78071601-78071746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               561-700
               

               Cow position:
               chr3:51608992-51609142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr3:2016624-2016471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               562-657
               

               Cow position:
               chr3:15973760-15973665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               83
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               562-669
               

               Cow position:
               chr3:77188630-77188523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               562-697
               

               Cow position:
               chr3:76270078-76269938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               562-701
               

               Cow position:
               chr3:30180275-30180129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 99
               

               Conread position:
               562-708
               

               Cow position:
               chr3:67519986-67520130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               562-708
               

               Cow position:
               chr3:83934916-83934761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr3:43388934-43389043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               563-708
               

               Cow position:
               chr3:40212844-40212998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               564-659
               

               Cow position:
               chr3:78201837-78201740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               87
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               564-700
               

               Cow position:
               chr3:3889389-3889524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               564-700
               

               Cow position:
               chr3:53249669-53249532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               102, 20
               

               Conread position:
               564-700
               

               Cow position:
               chr3:72027829-72027680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               564-708
               

               Cow position:
               chr3:53604554-53604710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               566-669
               

               Cow position:
               chr3:80958322-80958426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               566-708
               

               Cow position:
               chr3:20802454-20802595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               567-660
               

               Cow position:
               chr3:11281956-11281861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               567-708
               

               Cow position:
               chr3:15859194-15859343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               15, 122
               

               Conread position:
               568-669
               

               Cow position:
               chr3:29386055-29385951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               568-675
               

               Cow position:
               chr3:19044583-19044691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               568-700
               

               Cow position:
               chr3:58527563-58527426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               14, 91
               

               Conread position:
               568-708
               

               Cow position:
               chr3:28902578-28902723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               569-660
               

               Cow position:
               chr3:55730281-55730374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               569-708
               

               Cow position:
               chr3:3985500-3985358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               569-708
               

               Cow position:
               chr3:18687080-18686942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               75, 16
               

               Conread position:
               570-657
               

               Cow position:
               chr3:70333787-70333874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               570-669
               

               Cow position:
               chr3:10454028-10453927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               570-700
               

               Cow position:
               chr3:27246785-27246915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               94, 102
               

               Conread position:
               570-708
               

               Cow position:
               chr3:23804684-23804541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               576-700
               

               Cow position:
               chr3:15160693-15160564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               578-660
               

               Cow position:
               chr3:68303492-68303410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               75
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-669
               

               Cow position:
               chr3:22078252-22078161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-699
               

               Cow position:
               chr3:37641500-37641371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               578-700
               

               Cow position:
               chr3:59681733-59681860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               578-701
               

               Cow position:
               chr3:49787730-49787601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               578-705
               

               Cow position:
               chr3:2648334-2648471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr3:20996828-20996961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               88, 81
               

               Conread position:
               586-708
               

               Cow position:
               chr3:23753650-23753526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               587-700
               

               Cow position:
               chr3:51233939-51234052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               587-700
               

               Cow position:
               chr3:62312963-62312839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               587-700
               

               Cow position:
               chr3:62370222-62370098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               587-708
               

               Cow position:
               chr3:13329628-13329750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               69, 90
               

               Conread position:
               525-700
               

               Cow position:
               chr4:49425029-49424849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 98
               

               Conread position:
               536-669
               

               Cow position:
               chr4:15439817-15439685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               542-660
               

               Cow position:
               chr4:19152022-19151901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               542-669
               

               Cow position:
               chr4:46219146-46219015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               545-669
               

               Cow position:
               chr4:27691450-27691571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               546-676
               

               Cow position:
               chr4:5790869-5790738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               547-660
               

               Cow position:
               chr4:44024316-44024431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               548-671
               

               Cow position:
               chr4:55675136-55675261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               549-664
               

               Cow position:
               chr4:30944175-30944059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 114
               

               Conread position:
               549-669
               

               Cow position:
               chr4:47038986-47038870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               549-675
               

               Cow position:
               chr4:46656354-46656226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               550-701
               

               Cow position:
               chr4:32694008-32693848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               552-659
               

               Cow position:
               chr4:38886840-38886947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               552-701
               

               Cow position:
               chr4:17790081-17790232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 26
               

               Conread position:
               553-669
               

               Cow position:
               chr4:40995949-40995833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-669
               

               Cow position:
               chr4:57589626-57589509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               555-662
               

               Cow position:
               chr4:45669402-45669509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-668
               

               Cow position:
               chr4:43709941-43710056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr4:56746210-56746093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-678
               

               Cow position:
               chr4:32272708-32272834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               555-700
               

               Cow position:
               chr4:12052124-12052271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               555-701
               

               Cow position:
               chr4:7698475-7698325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               106, 23
               

               Conread position:
               555-704
               

               Cow position:
               chr4:36876640-36876802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr4:52823189-52823349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr4:61998987-61999145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               111, 27
               

               Conread position:
               556-701
               

               Cow position:
               chr4:59873640-59873489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               558-659
               

               Cow position:
               chr4:41186192-41186292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               558-700
               

               Cow position:
               chr4:8083598-8083737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               558-706
               

               Cow position:
               chr4:49338249-49338096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               558-708
               

               Cow position:
               chr4:2713645-2713807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               559-652
               

               Cow position:
               chr4:5637596-5637501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr4:64336066-64336179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               559-708
               

               Cow position:
               chr4:8352352-8352512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               560-669
               

               Cow position:
               chr4:5250403-5250290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               560-669
               

               Cow position:
               chr4:47283802-47283910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 54
               

               Conread position:
               561-669
               

               Cow position:
               chr4:21088659-21088769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr4:42347696-42347586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr4:47035512-47035622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr4:47230788-47230895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               561-697
               

               Cow position:
               chr4:40393018-40392879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               561-699
               

               Cow position:
               chr4:3299591-3299734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               561-700
               

               Cow position:
               chr4:23846847-23846990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               561-700
               

               Cow position:
               chr4:27657180-27657037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               561-701
               

               Cow position:
               chr4:30769239-30769094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               561-706
               

               Cow position:
               chr4:61214648-61214796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr4:25802903-25802744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 155
               

               Conread position:
               561-708
               

               Cow position:
               chr4:31178031-31177877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr4:32562041-32561882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               562-651
               

               Cow position:
               chr4:39340466-39340378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               562-659
               

               Cow position:
               chr4:45484011-45483913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               562-708
               

               Cow position:
               chr4:19292922-19292774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 112
               

               Conread position:
               563-656
               

               Cow position:
               chr4:27521767-27521672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               563-659
               

               Cow position:
               chr4:38949321-38949420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr4:22101058-22101162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr4:43909969-43909864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr4:47305288-47305180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               563-699
               

               Cow position:
               chr4:25227139-25227004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               563-701
               

               Cow position:
               chr4:9805802-9805939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               91, 45
               

               Conread position:
               564-669
               

               Cow position:
               chr4:53050201-53050094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               564-695
               

               Cow position:
               chr4:19542354-19542225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               564-708
               

               Cow position:
               chr4:59785524-59785375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               565-660
               

               Cow position:
               chr4:6072846-6072943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               565-695
               

               Cow position:
               chr4:29291709-29291580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               565-700
               

               Cow position:
               chr4:49794853-49794720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               99, 79
               

               Conread position:
               566-660
               

               Cow position:
               chr4:5904715-5904618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               566-669
               

               Cow position:
               chr4:11186170-11186066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               566-708
               

               Cow position:
               chr4:58018544-58018398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               88, 30
               

               Conread position:
               567-700
               

               Cow position:
               chr4:13344737-13344599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               567-708
               

               Cow position:
               chr4:29384042-29384182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               87, 15
               

               Conread position:
               569-699
               

               Cow position:
               chr4:50687664-50687804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               569-700
               

               Cow position:
               chr4:30691201-30691064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               569-701
               

               Cow position:
               chr4:61608769-61608905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               97, 37
               

               Conread position:
               572-669
               

               Cow position:
               chr4:50131717-50131619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 9
               

               Conread position:
               576-669
               

               Cow position:
               chr4:33273153-33273246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               576-701
               

               Cow position:
               chr4:9444490-9444627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               577-669
               

               Cow position:
               chr4:45250164-45250073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               80
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               578-669
               

               Cow position:
               chr4:25197300-25197391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-701
               

               Cow position:
               chr4:14131614-14131487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               80, 10
               

               Conread position:
               578-701
               

               Cow position:
               chr4:20124778-20124906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr4:2774913-2774772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr4:7043627-7043767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr4:26959776-26959916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               588-708
               

               Cow position:
               chr4:8675547-8675421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               588-708
               

               Cow position:
               chr4:8770274-8770151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               527-708
               

               Cow position:
               chr5:44868631-44868443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               535-648
               

               Cow position:
               chr5:35513536-35513422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 24
               

               Conread position:
               538-663
               

               Cow position:
               chr5:34301215-34301084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               543-669
               

               Cow position:
               chr5:72867314-72867186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               545-660
               

               Cow position:
               chr5:64060703-64060589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               546-696
               

               Cow position:
               chr5:16025223-16025370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 100
               

               Conread position:
               547-708
               

               Cow position:
               chr5:22957657-22957496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               110, 6
               

               Conread position:
               548-651
               

               Cow position:
               chr5:57685942-57685840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               550-700
               

               Cow position:
               chr5:57062276-57062435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 10
               

               Conread position:
               550-708
               

               Cow position:
               chr5:3772095-3771932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               550-708
               

               Cow position:
               chr5:25598079-25597918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 35
               

               Conread position:
               552-708
               

               Cow position:
               chr5:52853219-52853057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               553-660
               

               Cow position:
               chr5:54375066-54374959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-653
               

               Cow position:
               chr5:43490140-43490238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               554-669
               

               Cow position:
               chr5:65140549-65140434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-670
               

               Cow position:
               chr5:17253976-17254096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               554-671
               

               Cow position:
               chr5:26149281-26149168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-660
               

               Cow position:
               chr5:45337170-45337277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               555-668
               

               Cow position:
               chr5:53779403-53779290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr5:24108811-24108924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               19, 28
               

               Conread position:
               555-669
               

               Cow position:
               chr5:41757861-41757747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr5:51012247-51012134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr5:55965644-55965758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr5:57398999-57399117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-697
               

               Cow position:
               chr5:16937785-16937932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               555-701
               

               Cow position:
               chr5:25447136-25446978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr5:1178202-1178040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr5:4280695-4280534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               17, 107
               

               Conread position:
               555-708
               

               Cow position:
               chr5:55783716-55783877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               106, 5
               

               Conread position:
               555-708
               

               Cow position:
               chr5:56643315-56643153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               80, 23
               

               Conread position:
               556-669
               

               Cow position:
               chr5:41935409-41935521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               556-669
               

               Cow position:
               chr5:57447417-57447530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               556-701
               

               Cow position:
               chr5:43604386-43604232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               556-708
               

               Cow position:
               chr5:56624264-56624431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               557-660
               

               Cow position:
               chr5:17828228-17828334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               557-669
               

               Cow position:
               chr5:35208509-35208397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               557-669
               

               Cow position:
               chr5:40122362-40122474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               557-670
               

               Cow position:
               chr5:35969784-35969672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               108, 20
               

               Conread position:
               558-669
               

               Cow position:
               chr5:50723292-50723182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               558-708
               

               Cow position:
               chr5:50101131-50101288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               558-708
               

               Cow position:
               chr5:58487618-58487461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               559-659
               

               Cow position:
               chr5:54341010-54340912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               559-659
               

               Cow position:
               chr5:59872792-59872892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr5:5760065-5760176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr5:35246859-35246974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               559-675
               

               Cow position:
               chr5:63068475-63068593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               560-669
               

               Cow position:
               chr5:39937360-39937251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               22, 36
               

               Conread position:
               561-669
               

               Cow position:
               chr5:18084221-18084330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr5:61049577-61049468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               561-696
               

               Cow position:
               chr5:14000881-14000743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               99, 47
               

               Conread position:
               561-701
               

               Cow position:
               chr5:55943476-55943623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr5:59958411-59958260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr5:69427221-69427367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               92, 27
               

               Conread position:
               562-707
               

               Cow position:
               chr5:56563989-56563841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               563-678
               

               Cow position:
               chr5:40171556-40171440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               563-708
               

               Cow position:
               chr5:18289362-18289208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               564-669
               

               Cow position:
               chr5:43858179-43858284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               564-670
               

               Cow position:
               chr5:57755795-57755900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               565-669
               

               Cow position:
               chr5:32086788-32086890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               565-669
               

               Cow position:
               chr5:61914811-61914705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               566-701
               

               Cow position:
               chr5:30562166-30562025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               566-708
               

               Cow position:
               chr5:26548905-26549054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               567-669
               

               Cow position:
               chr5:43611935-43611834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               567-669
               

               Cow position:
               chr5:49821664-49821566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               567-700
               

               Cow position:
               chr5:29060703-29060841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               567-700
               

               Cow position:
               chr5:37253660-37253523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               568-701
               

               Cow position:
               chr5:32975321-32975467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               568-708
               

               Cow position:
               chr5:25450180-25450040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 93
               

               Conread position:
               570-669
               

               Cow position:
               chr5:40740093-40740192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               572-669
               

               Cow position:
               chr5:54875461-54875559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               572-708
               

               Cow position:
               chr5:7057166-7057316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               572-708
               

               Cow position:
               chr5:59662825-59662972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               578-659
               

               Cow position:
               chr5:45854726-45854645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               75
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-669
               

               Cow position:
               chr5:12902144-12902053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               80
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-669
               

               Cow position:
               chr5:17026420-17026329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-696
               

               Cow position:
               chr5:12562535-12562657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               80, 107
               

               Conread position:
               578-708
               

               Cow position:
               chr5:14419792-14419924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               73, 53
               

               Conread position:
               578-708
               

               Cow position:
               chr5:64140763-64140624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               579-707
               

               Cow position:
               chr5:70545080-70545207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               85, 78
               

               Conread position:
               580-659
               

               Cow position:
               chr5:54554962-54555041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               80
               

               Alignm identity:
               74
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               580-670
               

               Cow position:
               chr5:63763888-63763798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               79
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               580-698
               

               Cow position:
               chr5:48919021-48918904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               587-669
               

               Cow position:
               chr5:54712852-54712934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               74
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               531-669
               

               Cow position:
               chr6:15111548-15111688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               533-669
               

               Cow position:
               chr6:49686103-49685967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               43, 9
               

               Conread position:
               540-659
               

               Cow position:
               chr6:36267274-36267157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               542-699
               

               Cow position:
               chr6:8688576-8688738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               547-699
               

               Cow position:
               chr6:34076431-34076275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               107, 12
               

               Conread position:
               550-664
               

               Cow position:
               chr6:28620368-28620252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               550-669
               

               Cow position:
               chr6:51019418-51019298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               23, 5
               

               Conread position:
               552-701
               

               Cow position:
               chr6:33302664-33302501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               553-669
               

               Cow position:
               chr6:5330678-5330561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               553-708
               

               Cow position:
               chr6:53932583-53932746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               101, 25
               

               Conread position:
               554-660
               

               Cow position:
               chr6:63209992-63210097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-659
               

               Cow position:
               chr6:31231029-31231133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-661
               

               Cow position:
               chr6:63096303-63096197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-700
               

               Cow position:
               chr6:27219427-27219275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               555-700
               

               Cow position:
               chr6:45920956-45921106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               555-701
               

               Cow position:
               chr6:44543889-44544042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               117, 23
               

               Conread position:
               555-704
               

               Cow position:
               chr6:19402107-19401952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr6:3952785-3952618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr6:15974264-15974424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               88, 6
               

               Conread position:
               555-708
               

               Cow position:
               chr6:16627990-16627834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               103, 56
               

               Conread position:
               556-669
               

               Cow position:
               chr6:55196477-55196362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-701
               

               Cow position:
               chr6:21052184-21052343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               557-670
               

               Cow position:
               chr6:28559803-28559686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               557-685
               

               Cow position:
               chr6:32458866-32458737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               24, 107
               

               Conread position:
               557-700
               

               Cow position:
               chr6:15300582-15300725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               97, 21
               

               Conread position:
               557-708
               

               Cow position:
               chr6:46558314-46558157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               558-669
               

               Cow position:
               chr6:31928899-31928786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               559-659
               

               Cow position:
               chr6:21004938-21004837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-668
               

               Cow position:
               chr6:55764295-55764186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               102, 70
               

               Conread position:
               559-669
               

               Cow position:
               chr6:16738874-16738762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-671
               

               Cow position:
               chr6:21183966-21184077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               559-700
               

               Cow position:
               chr6:7189877-7190011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               559-700
               

               Cow position:
               chr6:34463337-34463480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               95, 25
               

               Conread position:
               559-708
               

               Cow position:
               chr6:42483672-42483514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               559-708
               

               Cow position:
               chr6:54840240-54840408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               560-669
               

               Cow position:
               chr6:19936312-19936421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               560-701
               

               Cow position:
               chr6:16137509-16137664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               561-660
               

               Cow position:
               chr6:12711535-12711636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-660
               

               Cow position:
               chr6:53138683-53138781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               561-660
               

               Cow position:
               chr6:63251665-63251765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr6:17313995-17313885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr6:24110541-24110431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr6:57079680-57079573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               563-708
               

               Cow position:
               chr6:35726345-35726194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               564-659
               

               Cow position:
               chr6:62437670-62437574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               564-669
               

               Cow position:
               chr6:30688258-30688362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               564-700
               

               Cow position:
               chr6:59297297-59297160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               565-660
               

               Cow position:
               chr6:28561915-28562012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               566-700
               

               Cow position:
               chr6:62539355-62539495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               566-708
               

               Cow position:
               chr6:16016287-16016133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               567-699
               

               Cow position:
               chr6:7291560-7291424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               568-669
               

               Cow position:
               chr6:14263641-14263742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               83
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               568-669
               

               Cow position:
               chr6:18447267-18447368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               569-671
               

               Cow position:
               chr6:26929196-26929299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               569-708
               

               Cow position:
               chr6:12099441-12099587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               569-708
               

               Cow position:
               chr6:21175581-21175437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               569-708
               

               Cow position:
               chr6:30825529-30825668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               11, 28
               

               Conread position:
               570-669
               

               Cow position:
               chr6:37827701-37827800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               571-669
               

               Cow position:
               chr6:23381419-23381519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               571-682
               

               Cow position:
               chr6:53024566-53024677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               572-704
               

               Cow position:
               chr6:54490502-54490633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               92, 87
               

               Conread position:
               576-659
               

               Cow position:
               chr6:26764581-26764665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               76
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               577-669
               

               Cow position:
               chr6:8186948-8187040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-676
               

               Cow position:
               chr6:65831601-65831503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-701
               

               Cow position:
               chr6:32126290-32126162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               586-707
               

               Cow position:
               chr6:23942444-23942560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               588-708
               

               Cow position:
               chr6:40833792-40833915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 23
               

               Conread position:
               541-708
               

               Cow position:
               chr7:39093645-39093824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               541-708
               

               Cow position:
               chr7:53271286-53271113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               543-701
               

               Cow position:
               chr7:53609541-53609710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               547-705
               

               Cow position:
               chr7:4893120-4892964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               548-700
               

               Cow position:
               chr7:23256021-23255864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               118, 30
               

               Conread position:
               549-669
               

               Cow position:
               chr7:22832512-22832393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               551-669
               

               Cow position:
               chr7:14497552-14497433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               552-669
               

               Cow position:
               chr7:35651461-35651577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               552-685
               

               Cow position:
               chr7:39763915-39764047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               552-706
               

               Cow position:
               chr7:63101674-63101521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               27, 120
               

               Conread position:
               553-652
               

               Cow position:
               chr7:519259-519359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               553-669
               

               Cow position:
               chr7:46823935-46823822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               553-669
               

               Cow position:
               chr7:53271090-53270974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               553-698
               

               Cow position:
               chr7:39131236-39131387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               553-701
               

               Cow position:
               chr7:47547673-47547518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 109
               

               Conread position:
               554-708
               

               Cow position:
               chr7:40412856-40412694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               554-708
               

               Cow position:
               chr7:44942822-44942659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr7:9816265-9816149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr7:14816562-14816677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr7:23615690-23615804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr7:54090751-54090636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-670
               

               Cow position:
               chr7:58800432-58800318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               555-677
               

               Cow position:
               chr7:10889056-10888936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               555-683
               

               Cow position:
               chr7:36248356-36248224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr7:49068578-49068739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               107, 23
               

               Conread position:
               555-708
               

               Cow position:
               chr7:55315940-55316100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               556-668
               

               Cow position:
               chr7:61758489-61758596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               556-708
               

               Cow position:
               chr7:14519777-14519939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               557-669
               

               Cow position:
               chr7:35096759-35096873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               558-662
               

               Cow position:
               chr7:8196449-8196551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               558-675
               

               Cow position:
               chr7:58967531-58967413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               558-701
               

               Cow position:
               chr7:3160058-3159913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               24, 51
               

               Conread position:
               559-659
               

               Cow position:
               chr7:18958280-18958381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-701
               

               Cow position:
               chr7:28441435-28441287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               559-708
               

               Cow position:
               chr7:12918321-12918478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               560-660
               

               Cow position:
               chr7:8376630-8376528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               560-660
               

               Cow position:
               chr7:64384852-64384954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               560-669
               

               Cow position:
               chr7:43450804-43450693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 41
               

               Conread position:
               560-669
               

               Cow position:
               chr7:51685274-51685166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               560-694
               

               Cow position:
               chr7:47047088-47047229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               560-705
               

               Cow position:
               chr7:60547410-60547560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               20, 145
               

               Conread position:
               561-669
               

               Cow position:
               chr7:9238747-9238857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-686
               

               Cow position:
               chr7:2897401-2897275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               561-700
               

               Cow position:
               chr7:52378878-52378739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               97, 113
               

               Conread position:
               561-701
               

               Cow position:
               chr7:68172899-68173051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr7:19466003-19466148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               93, 21
               

               Conread position:
               561-708
               

               Cow position:
               chr7:31885854-31885695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr7:39528534-39528687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               562-669
               

               Cow position:
               chr7:49941876-49941982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               562-708
               

               Cow position:
               chr7:30290686-30290843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr7:38347589-38347697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               563-698
               

               Cow position:
               chr7:3747506-3747372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 43
               

               Conread position:
               563-708
               

               Cow position:
               chr7:40414747-40414895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               564-659
               

               Cow position:
               chr7:1804472-1804566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               564-659
               

               Cow position:
               chr7:35088914-35088819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               80
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               564-700
               

               Cow position:
               chr7:11066725-11066589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 51
               

               Conread position:
               564-700
               

               Cow position:
               chr7:30012083-30011942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               564-701
               

               Cow position:
               chr7:16285319-16285468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 141
               

               Conread position:
               565-669
               

               Cow position:
               chr7:8832756-8832860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               565-669
               

               Cow position:
               chr7:53834334-53834439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               565-699
               

               Cow position:
               chr7:5724426-5724292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               95, 16
               

               Conread position:
               566-658
               

               Cow position:
               chr7:32823800-32823894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               566-700
               

               Cow position:
               chr7:30154759-30154896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               88, 16
               

               Conread position:
               566-701
               

               Cow position:
               chr7:19671897-19671756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               566-708
               

               Cow position:
               chr7:47523466-47523318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 76
               

               Conread position:
               567-669
               

               Cow position:
               chr7:12484553-12484451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               567-700
               

               Cow position:
               chr7:48020676-48020538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               567-701
               

               Cow position:
               chr7:9858603-9858464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               567-708
               

               Cow position:
               chr7:17000980-17000828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               568-708
               

               Cow position:
               chr7:8523529-8523678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               568-708
               

               Cow position:
               chr7:40321728-40321590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               569-708
               

               Cow position:
               chr7:18016921-18016776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               571-669
               

               Cow position:
               chr7:46021729-46021827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 93
               

               Conread position:
               571-701
               

               Cow position:
               chr7:40361900-40361760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               572-700
               

               Cow position:
               chr7:38429471-38429601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               100, 126
               

               Conread position:
               576-669
               

               Cow position:
               chr7:25263612-25263520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               576-708
               

               Cow position:
               chr7:7535777-7535643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 130
               

               Conread position:
               578-669
               

               Cow position:
               chr7:23609621-23609530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-669
               

               Cow position:
               chr7:52591760-52591851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-700
               

               Cow position:
               chr7:40322848-40322724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               578-701
               

               Cow position:
               chr7:53791354-53791482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr7:206654-206525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr7:32807687-32807550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               580-706
               

               Cow position:
               chr7:27290258-27290395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               501-648
               

               Cow position:
               chr8:22914194-22914049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               512-657
               

               Cow position:
               chr8:35827532-35827671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               528-667
               

               Cow position:
               chr8:48436976-48437113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               536-700
               

               Cow position:
               chr8:54306607-54306433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               540-708
               

               Cow position:
               chr8:690037-690209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               122, 43
               

               Conread position:
               543-671
               

               Cow position:
               chr8:52197210-52197340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               543-700
               

               Cow position:
               chr8:45149556-45149713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               39, 107
               

               Conread position:
               544-669
               

               Cow position:
               chr8:6795629-6795505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 11
               

               Conread position:
               544-708
               

               Cow position:
               chr8:20783019-20783193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               37, 5
               

               Conread position:
               545-660
               

               Cow position:
               chr8:38331311-38331194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               545-708
               

               Cow position:
               chr8:45664980-45664818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 65
               

               Conread position:
               548-701
               

               Cow position:
               chr8:6232662-6232814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               106, 7
               

               Conread position:
               550-708
               

               Cow position:
               chr8:27731279-27731108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               551-664
               

               Cow position:
               chr8:48637631-48637518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               551-669
               

               Cow position:
               chr8:38641491-38641371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               552-671
               

               Cow position:
               chr8:59092648-59092767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               553-668
               

               Cow position:
               chr8:46543887-46544002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 7
               

               Conread position:
               553-669
               

               Cow position:
               chr8:12105782-12105668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               553-669
               

               Cow position:
               chr8:20105637-20105753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               553-708
               

               Cow position:
               chr8:9646764-9646614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               554-669
               

               Cow position:
               chr8:39352644-39352759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-660
               

               Cow position:
               chr8:28322208-28322100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               555-660
               

               Cow position:
               chr8:52870413-52870308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-668
               

               Cow position:
               chr8:6475309-6475423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr8:36771211-36771096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr8:48182738-48182622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-700
               

               Cow position:
               chr8:36375291-36375437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               89, 32
               

               Conread position:
               555-701
               

               Cow position:
               chr8:55454895-55454744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr8:37298708-37298548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               96, 22
               

               Conread position:
               555-708
               

               Cow position:
               chr8:51160333-51160492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               556-669
               

               Cow position:
               chr8:53606285-53606400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-704
               

               Cow position:
               chr8:1188145-1187991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-708
               

               Cow position:
               chr8:43112621-43112775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               95, 27
               

               Conread position:
               557-669
               

               Cow position:
               chr8:51524237-51524125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               558-669
               

               Cow position:
               chr8:20327618-20327734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               558-697
               

               Cow position:
               chr8:57389026-57388879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               558-701
               

               Cow position:
               chr8:19223432-19223581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               558-708
               

               Cow position:
               chr8:32243826-32243667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               558-708
               

               Cow position:
               chr8:47057435-47057593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               102, 20
               

               Conread position:
               559-685
               

               Cow position:
               chr8:32260320-32260195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               561-669
               

               Cow position:
               chr8:55725538-55725648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               561-700
               

               Cow position:
               chr8:21776140-21776000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 48
               

               Conread position:
               561-700
               

               Cow position:
               chr8:46684650-46684509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr8:18870112-18869952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr8:31767814-31767964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               93, 21
               

               Conread position:
               562-684
               

               Cow position:
               chr8:50770385-50770260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               562-698
               

               Cow position:
               chr8:60765990-60766125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 44
               

               Conread position:
               562-708
               

               Cow position:
               chr8:39116360-39116212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               20, 118
               

               Conread position:
               562-708
               

               Cow position:
               chr8:39968054-39968211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr8:5385456-5385564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr8:25083402-25083295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr8:28382858-28382966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               564-670
               

               Cow position:
               chr8:4193312-4193423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               565-669
               

               Cow position:
               chr8:10194290-10194185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               565-669
               

               Cow position:
               chr8:26626093-26625989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               565-669
               

               Cow position:
               chr8:37683797-37683690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               566-708
               

               Cow position:
               chr8:24419064-24419206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 88
               

               Conread position:
               567-676
               

               Cow position:
               chr8:28412477-28412586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 16
               

               Conread position:
               567-708
               

               Cow position:
               chr8:1651814-1651661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               568-669
               

               Cow position:
               chr8:20112655-20112554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 45
               

               Conread position:
               568-708
               

               Cow position:
               chr8:61277947-61278091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 14
               

               Conread position:
               569-669
               

               Cow position:
               chr8:36054384-36054283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               572-700
               

               Cow position:
               chr8:37443738-37443608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               42, 102
               

               Conread position:
               572-701
               

               Cow position:
               chr8:12058941-12058800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               574-684
               

               Cow position:
               chr8:23370107-23370215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               578-699
               

               Cow position:
               chr8:11216649-11216775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               578-700
               

               Cow position:
               chr8:19785067-19784937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               578-700
               

               Cow position:
               chr8:38711796-38711672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               578-701
               

               Cow position:
               chr8:8850425-8850552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               578-708
               

               Cow position:
               chr8:28228448-28228316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               80, 36
               

               Conread position:
               578-708
               

               Cow position:
               chr8:46952726-46952586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               583-701
               

               Cow position:
               chr8:20030451-20030332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               536-669
               

               Cow position:
               chr9:26477000-26477134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               547-670
               

               Cow position:
               chr9:44526906-44527033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               547-708
               

               Cow position:
               chr9:34410595-34410427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 68
               

               Conread position:
               547-708
               

               Cow position:
               chr9:35028372-35028196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               549-664
               

               Cow position:
               chr9:37016492-37016376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               549-669
               

               Cow position:
               chr9:8613411-8613292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               549-700
               

               Cow position:
               chr9:48016791-48016941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               550-669
               

               Cow position:
               chr9:31625933-31626053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               552-660
               

               Cow position:
               chr9:27279110-27279219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               552-669
               

               Cow position:
               chr9:28315227-28315347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               552-669
               

               Cow position:
               chr9:50977450-50977334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               552-708
               

               Cow position:
               chr9:35295501-35295659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               102, 26
               

               Conread position:
               552-708
               

               Cow position:
               chr9:54681329-54681478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               553-659
               

               Cow position:
               chr9:53413471-53413367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               553-697
               

               Cow position:
               chr9:39148888-39149037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               553-701
               

               Cow position:
               chr9:45170582-45170419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               554-650
               

               Cow position:
               chr9:19743784-19743878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               555-657
               

               Cow position:
               chr9:36849435-36849539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               555-660
               

               Cow position:
               chr9:6954446-6954340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               555-668
               

               Cow position:
               chr9:34286606-34286719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-668
               

               Cow position:
               chr9:48046340-48046456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               555-669
               

               Cow position:
               chr9:41644944-41644831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               555-701
               

               Cow position:
               chr9:7805592-7805743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr9:4629917-4630073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               555-708
               

               Cow position:
               chr9:9091306-9091136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               556-659
               

               Cow position:
               chr9:32662229-32662124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-708
               

               Cow position:
               chr9:19657167-19657007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 54
               

               Conread position:
               556-708
               

               Cow position:
               chr9:48808951-48809107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 82
               

               Conread position:
               558-659
               

               Cow position:
               chr9:34390225-34390327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               559-659
               

               Cow position:
               chr9:28747707-28747606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr9:34423429-34423540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               559-669
               

               Cow position:
               chr9:36457809-36457918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               560-670
               

               Cow position:
               chr9:8066226-8066116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               52, 98
               

               Conread position:
               561-708
               

               Cow position:
               chr9:7543444-7543294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               561-708
               

               Cow position:
               chr9:8645078-8645235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               100, 34
               

               Conread position:
               561-708
               

               Cow position:
               chr9:51891065-51891215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               561-708
               

               Cow position:
               chr9:61019553-61019393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               562-648
               

               Cow position:
               chr9:11886332-11886419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               77
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               562-660
               

               Cow position:
               chr9:28866280-28866180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               562-668
               

               Cow position:
               chr9:5399276-5399383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               562-708
               

               Cow position:
               chr9:59586130-59586280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               563-660
               

               Cow position:
               chr9:26578394-26578295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr9:9724061-9723957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               563-669
               

               Cow position:
               chr9:52510929-52511037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               563-708
               

               Cow position:
               chr9:3946328-3946179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               103, 19
               

               Conread position:
               563-708
               

               Cow position:
               chr9:34917361-34917216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               563-708
               

               Cow position:
               chr9:51566683-51566526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               564-669
               

               Cow position:
               chr9:8537122-8537228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               565-657
               

               Cow position:
               chr9:30653240-30653147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               81
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               565-669
               

               Cow position:
               chr9:5068655-5068759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               567-699
               

               Cow position:
               chr9:11123661-11123523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               567-708
               

               Cow position:
               chr9:14738070-14738218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               569-708
               

               Cow position:
               chr9:2397632-2397776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               99, 89
               

               Conread position:
               569-708
               

               Cow position:
               chr9:63785085-63784945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               85, 13
               

               Conread position:
               570-701
               

               Cow position:
               chr9:8767592-8767455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               572-706
               

               Cow position:
               chr9:17769145-17769285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               573-669
               

               Cow position:
               chr9:31514107-31514013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               578-659
               

               Cow position:
               chr9:39681132-39681213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               73
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               580-708
               

               Cow position:
               chr9:16216811-16216948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               580-708
               

               Cow position:
               chr9:44822489-44822355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               517-708
               

               Cow position:
               chrX:46910099-46909902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               6, 65
               

               Conread position:
               542-669
               

               Cow position:
               chrX:37867519-37867390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               542-707
               

               Cow position:
               chrX:26720426-26720594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               10, 38
               

               Conread position:
               545-701
               

               Cow position:
               chrX:19717774-19717614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 66
               

               Conread position:
               547-701
               

               Cow position:
               chrX:41199477-41199321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               111, 14
               

               Conread position:
               548-669
               

               Cow position:
               chrX:25815644-25815765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               106, 7
               

               Conread position:
               548-670
               

               Cow position:
               chrX:5063495-5063373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               548-700
               

               Cow position:
               chrX:6544499-6544349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               117, 34
               

               Conread position:
               548-708
               

               Cow position:
               chrX:4268812-4268977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               549-669
               

               Cow position:
               chrX:4403573-4403454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               549-676
               

               Cow position:
               chrX:38080407-38080277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               549-700
               

               Cow position:
               chrX:42331526-42331379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               120, 10
               

               Conread position:
               550-657
               

               Cow position:
               chrX:38968153-38968043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               550-708
               

               Cow position:
               chrX:19356716-19356550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               104, 28
               

               Conread position:
               552-669
               

               Cow position:
               chrX:783703-783581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               552-669
               

               Cow position:
               chrX:4559986-4559870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               552-669
               

               Cow position:
               chrX:26881826-26881943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               552-699
               

               Cow position:
               chrX:45228727-45228577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               553-669
               

               Cow position:
               chrX:17498577-17498459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               553-669
               

               Cow position:
               chrX:18196251-18196135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 23
               

               Conread position:
               553-700
               

               Cow position:
               chrX:39353024-39352880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               111, 91
               

               Conread position:
               553-708
               

               Cow position:
               chrX:31729691-31729529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               31, 108
               

               Conread position:
               554-700
               

               Cow position:
               chrX:46068513-46068664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               112, 41
               

               Conread position:
               555-659
               

               Cow position:
               chrX:22134765-22134875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-659
               

               Cow position:
               chrX:40480598-40480702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-659
               

               Cow position:
               chrX:42482538-42482644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               555-660
               

               Cow position:
               chrX:755197-755088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-660
               

               Cow position:
               chrX:32590154-32590260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               555-669
               

               Cow position:
               chrX:15546134-15546018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 61
               

               Conread position:
               555-669
               

               Cow position:
               chrX:17231989-17231873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-669
               

               Cow position:
               chrX:27320696-27320585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               555-669
               

               Cow position:
               chrX:30962625-30962739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-693
               

               Cow position:
               chrX:11454424-11454283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               101, 120
               

               Conread position:
               555-701
               

               Cow position:
               chrX:20887397-20887547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 56
               

               Conread position:
               555-708
               

               Cow position:
               chrX:1938266-1938102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 160
               

               Conread position:
               555-708
               

               Cow position:
               chrX:33466872-33466711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 52
               

               Conread position:
               555-708
               

               Cow position:
               chrX:35885480-35885640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 106
               

               Conread position:
               555-708
               

               Cow position:
               chrX:41941872-41941710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 23
               

               Conread position:
               556-663
               

               Cow position:
               chrX:40580356-40580464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               556-668
               

               Cow position:
               chrX:11856654-11856539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               556-669
               

               Cow position:
               chrX:3130898-3130779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               556-669
               

               Cow position:
               chrX:4327930-4328047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-669
               

               Cow position:
               chrX:19000377-19000263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-669
               

               Cow position:
               chrX:44055053-44054939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               557-659
               

               Cow position:
               chrX:15545401-15545505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               557-669
               

               Cow position:
               chrX:29724002-29723887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               557-670
               

               Cow position:
               chrX:35410002-35409887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               558-652
               

               Cow position:
               chrX:42161091-42160999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               558-669
               

               Cow position:
               chrX:6407790-6407680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               558-669
               

               Cow position:
               chrX:34193831-34193945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               558-669
               

               Cow position:
               chrX:36866420-36866309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               558-701
               

               Cow position:
               chrX:16763683-16763831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               558-706
               

               Cow position:
               chrX:27226732-27226581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               24, 122
               

               Conread position:
               559-667
               

               Cow position:
               chrX:41435293-41435403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               12, 104
               

               Conread position:
               559-708
               

               Cow position:
               chrX:1101796-1101644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               559-708
               

               Cow position:
               chrX:41011140-41010985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               16, 56
               

               Conread position:
               560-700
               

               Cow position:
               chrX:42875454-42875307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               560-701
               

               Cow position:
               chrX:38321138-38321288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               561-669
               

               Cow position:
               chrX:42506701-42506810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-697
               

               Cow position:
               chrX:33001144-33001003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               561-708
               

               Cow position:
               chrX:41790181-41790342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               562-669
               

               Cow position:
               chrX:11670930-11670823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               562-669
               

               Cow position:
               chrX:17524139-17524247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               562-669
               

               Cow position:
               chrX:35285420-35285310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               562-708
               

               Cow position:
               chrX:1571355-1571501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 20
               

               Conread position:
               563-661
               

               Cow position:
               chrX:23335732-23335831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               563-669
               

               Cow position:
               chrX:8759865-8759759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               563-669
               

               Cow position:
               chrX:42449769-42449877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               563-701
               

               Cow position:
               chrX:37717964-37717815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               563-701
               

               Cow position:
               chrX:42246939-42247088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               563-708
               

               Cow position:
               chrX:13924103-13923951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               564-650
               

               Cow position:
               chrX:22328461-22328373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               79
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               564-669
               

               Cow position:
               chrX:10479988-10479886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               564-669
               

               Cow position:
               chrX:20339654-20339757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               564-669
               

               Cow position:
               chrX:27442295-27442402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               564-708
               

               Cow position:
               chrX:51660-51814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               565-661
               

               Cow position:
               chrX:13122184-13122088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               80
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               565-669
               

               Cow position:
               chrX:41454711-41454817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               565-708
               

               Cow position:
               chrX:4632612-4632770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               566-669
               

               Cow position:
               chrX:1996212-1996315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               566-669
               

               Cow position:
               chrX:36367695-36367798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               566-684
               

               Cow position:
               chrX:38726905-38727027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               84, 65
               

               Conread position:
               566-700
               

               Cow position:
               chrX:7648172-7648308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               567-669
               

               Cow position:
               chrX:8642284-8642181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               567-700
               

               Cow position:
               chrX:3806912-3806777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               79, 18
               

               Conread position:
               568-700
               

               Cow position:
               chrX:27415350-27415485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               15, 57
               

               Conread position:
               568-708
               

               Cow position:
               chrX:17929237-17929088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               569-685
               

               Cow position:
               chrX:24170489-24170603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               569-708
               

               Cow position:
               chrX:38964334-38964195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 89
               

               Conread position:
               571-659
               

               Cow position:
               chrX:8925914-8925826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               76
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               571-700
               

               Cow position:
               chrX:23497463-23497596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               571-701
               

               Cow position:
               chrX:25925422-25925548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               572-700
               

               Cow position:
               chrX:41166596-41166730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               574-663
               

               Cow position:
               chrX:41990891-41990981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               78
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               574-699
               

               Cow position:
               chrX:32910328-32910195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               576-669
               

               Cow position:
               chrX:876618-876710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               576-700
               

               Cow position:
               chrX:28107075-28106942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               578-672
               

               Cow position:
               chrX:38726163-38726070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               578-697
               

               Cow position:
               chrX:16762995-16762872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               578-708
               

               Cow position:
               chrX:40337138-40336997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               578-708
               

               Cow position:
               chrX:40680842-40680701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               579-669
               

               Cow position:
               chrX:27508798-27508888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               79
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               580-658
               

               Cow position:
               chrX:19161905-19161983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               79
               

               Alignm identity:
               72
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               587-669
               

               Cow position:
               chrX:33654625-33654707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               73
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               588-708
               

               Cow position:
               chrX:42836398-42836268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               73, 0