Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8024D01.5
        

               Conread position:
               1-158
               

               Cow position:
               chr10:55147073-55147236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-183
               

               Cow position:
               chr10:27687370-27687187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               102, 67
               

               Conread position:
               1-197
               

               Cow position:
               chr10:45992878-45992680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               102, 34
               

               Conread position:
               2-192
               

               Cow position:
               chr10:16749452-16749647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               6-189
               

               Cow position:
               chr10:25496694-25496882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 181
               

               Conread position:
               19-187
               

               Cow position:
               chr10:66369818-66369644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               29-183
               

               Cow position:
               chr10:40510987-40510829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               30-192
               

               Cow position:
               chr10:31057054-31056890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               72, 141
               

               Conread position:
               577-713
               

               Cow position:
               chr10:36855919-36856054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 14
               

               Conread position:
               591-719
               

               Cow position:
               chr10:16830189-16830316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               603-719
               

               Cow position:
               chr10:47182383-47182499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr10:15602000-15602111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr10:17518667-17518778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-713
               

               Cow position:
               chr10:11966669-11966772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               611-717
               

               Cow position:
               chr10:9959393-9959287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-717
               

               Cow position:
               chr10:10027749-10027642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               621-713
               

               Cow position:
               chr10:15383495-15383403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-192
               

               Cow position:
               chr11:67966714-67966519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               95, 39
               

               Conread position:
               5-187
               

               Cow position:
               chr11:42685417-42685231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               26-190
               

               Cow position:
               chr11:72088365-72088198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               77, 42
               

               Conread position:
               538-719
               

               Cow position:
               chr11:75479760-75479947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               5, 28
               

               Conread position:
               570-704
               

               Cow position:
               chr11:59744217-59744086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               571-719
               

               Cow position:
               chr11:18119727-18119578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 75
               

               Conread position:
               599-717
               

               Cow position:
               chr11:64029071-64029189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               19, 108
               

               Conread position:
               599-718
               

               Cow position:
               chr11:24551586-24551467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-713
               

               Cow position:
               chr11:5559476-5559364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               604-719
               

               Cow position:
               chr11:32585011-32584896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               608-717
               

               Cow position:
               chr11:62620562-62620455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr11:68592205-68592094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               609-719
               

               Cow position:
               chr11:30708690-30708580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-720
               

               Cow position:
               chr11:26057464-26057575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               612-717
               

               Cow position:
               chr11:73638037-73637932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               614-719
               

               Cow position:
               chr11:33369332-33369227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-187
               

               Cow position:
               chr12:8205678-8205864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 125
               

               Conread position:
               1-187
               

               Cow position:
               chr12:8543169-8543358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               1-190
               

               Cow position:
               chr12:38099283-38099477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               99, 40
               

               Conread position:
               6-183
               

               Cow position:
               chr12:37389523-37389698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 39
               

               Conread position:
               24-188
               

               Cow position:
               chr12:15737316-15737474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               54, 69
               

               Conread position:
               33-192
               

               Cow position:
               chr12:12308140-12308305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               591-719
               

               Cow position:
               chr12:6719570-6719443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               598-719
               

               Cow position:
               chr12:8143639-8143760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               599-719
               

               Cow position:
               chr12:3057264-3057143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 109
               

               Conread position:
               602-718
               

               Cow position:
               chr12:20356641-20356752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               602-718
               

               Cow position:
               chr12:27663819-27663936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr12:11168038-11167922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 78
               

               Conread position:
               605-719
               

               Cow position:
               chr12:22048091-22047977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr12:1089226-1089337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr12:13995630-13995742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               610-698
               

               Cow position:
               chr12:9791117-9791205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               76
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr12:43619444-43619337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               617-713
               

               Cow position:
               chr12:22485968-22485868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-183
               

               Cow position:
               chr13:2360712-2360898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               76, 16
               

               Conread position:
               3-187
               

               Cow position:
               chr13:17026608-17026797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               17-187
               

               Cow position:
               chr13:6172015-6172189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 104
               

               Conread position:
               32-183
               

               Cow position:
               chr13:52317604-52317760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               570-719
               

               Cow position:
               chr13:51198553-51198704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               573-717
               

               Cow position:
               chr13:8699995-8699848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               26, 6
               

               Conread position:
               579-719
               

               Cow position:
               chr13:19182916-19182779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               29, 101
               

               Conread position:
               583-710
               

               Cow position:
               chr13:57002479-57002608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               599-719
               

               Cow position:
               chr13:2776059-2776179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               599-719
               

               Cow position:
               chr13:56019222-56019103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr13:369348-369231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr13:3153525-3153641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr13:22115453-22115569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               603-719
               

               Cow position:
               chr13:20174516-20174632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               32, 86
               

               Conread position:
               605-713
               

               Cow position:
               chr13:20042483-20042375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               605-717
               

               Cow position:
               chr13:53619781-53619893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-180
               

               Cow position:
               chr14:40068850-40068669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               29, 73
               

               Conread position:
               1-188
               

               Cow position:
               chr14:48426753-48426561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               29-192
               

               Cow position:
               chr14:26037810-26037977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               66, 165
               

               Conread position:
               576-717
               

               Cow position:
               chr14:38747489-38747624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               580-719
               

               Cow position:
               chr14:12071715-12071576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               585-719
               

               Cow position:
               chr14:28304973-28304836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               602-717
               

               Cow position:
               chr14:47224539-47224419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr14:27364417-27364528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               609-719
               

               Cow position:
               chr14:26115899-26116010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               609-719
               

               Cow position:
               chr14:41755997-41756107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr14:29964860-29964968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr14:36559383-36559278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               612-719
               

               Cow position:
               chr14:5668277-5668170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-179
               

               Cow position:
               chr15:12773095-12773277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               26, 51
               

               Conread position:
               1-186
               

               Cow position:
               chr15:13228450-13228641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr15:13247489-13247680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-189
               

               Cow position:
               chr15:6172849-6172660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               29, 144
               

               Conread position:
               3-188
               

               Cow position:
               chr15:27066772-27066584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               27, 67
               

               Conread position:
               27-188
               

               Cow position:
               chr15:10033157-10032993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 27
               

               Conread position:
               27-189
               

               Cow position:
               chr15:4547575-4547414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               54, 37
               

               Conread position:
               27-189
               

               Cow position:
               chr15:10499946-10500110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               68, 42
               

               Conread position:
               27-192
               

               Cow position:
               chr15:2833173-2833001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               72, 107
               

               Conread position:
               589-717
               

               Cow position:
               chr15:27656968-27657098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               600-720
               

               Cow position:
               chr15:242060-241941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               601-719
               

               Cow position:
               chr15:26380867-26380749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               601-719
               

               Cow position:
               chr15:36435082-36435200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-713
               

               Cow position:
               chr15:23572807-23572697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               602-717
               

               Cow position:
               chr15:39474055-39473939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr15:48095237-48095356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               605-719
               

               Cow position:
               chr15:51831908-51831794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               607-719
               

               Cow position:
               chr15:38652717-38652605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr15:17124584-17124473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr15:19554036-19553929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr15:36904192-36904301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr16:50544639-50544458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               5-186
               

               Cow position:
               chr16:49769649-49769463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 50
               

               Conread position:
               6-216
               

               Cow position:
               chr16:49097729-49097944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 171
               

               Conread position:
               19-183
               

               Cow position:
               chr16:40523218-40523389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               29-183
               

               Cow position:
               chr16:24023963-24024119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               40, 64
               

               Conread position:
               30-186
               

               Cow position:
               chr16:18054013-18054176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               32-183
               

               Cow position:
               chr16:10693755-10693598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 64
               

               Conread position:
               571-719
               

               Cow position:
               chr16:56082122-56082270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               35, 25
               

               Conread position:
               600-720
               

               Cow position:
               chr16:50442762-50442642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               101, 8
               

               Conread position:
               602-713
               

               Cow position:
               chr16:24672652-24672763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               96, 6
               

               Conread position:
               602-719
               

               Cow position:
               chr16:7928171-7928290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr16:17665863-17665748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr16:47274514-47274632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr16:21442406-21442517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               93, 22
               

               Conread position:
               609-719
               

               Cow position:
               chr16:56595185-56595295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               610-717
               

               Cow position:
               chr16:11584206-11584308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               611-717
               

               Cow position:
               chr16:44138291-44138396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               611-718
               

               Cow position:
               chr16:2751174-2751068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr16:12251223-12251114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               78, 10
               

               Conread position:
               611-719
               

               Cow position:
               chr16:19720616-19720724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr16:30368625-30368733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               615-719
               

               Cow position:
               chr16:35297598-35297496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               1-189
               

               Cow position:
               chr17:21385674-21385489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               29, 107
               

               Conread position:
               1-189
               

               Cow position:
               chr17:21585767-21585961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               29, 68
               

               Conread position:
               21-188
               

               Cow position:
               chr17:35168740-35168913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               8, 29
               

               Conread position:
               27-189
               

               Cow position:
               chr17:16359285-16359116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               32-195
               

               Cow position:
               chr17:24815985-24816151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 16
               

               Conread position:
               577-719
               

               Cow position:
               chr17:5761876-5762019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               101, 19
               

               Conread position:
               583-713
               

               Cow position:
               chr17:17772149-17772280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               21, 16
               

               Conread position:
               599-719
               

               Cow position:
               chr17:25709969-25709847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               602-706
               

               Cow position:
               chr17:9932061-9932164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               15, 94
               

               Conread position:
               602-713
               

               Cow position:
               chr17:11664328-11664441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               602-717
               

               Cow position:
               chr17:39964127-39964012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr17:25608268-25608385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr17:11618832-11618719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               610-713
               

               Cow position:
               chr17:6787181-6787078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               610-717
               

               Cow position:
               chr17:25473040-25473143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr17:4271119-4271228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr17:44797919-44797811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               86
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               615-718
               

               Cow position:
               chr17:40741890-40741787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               85, 62
               

               Conread position:
               627-719
               

               Cow position:
               chr17:14025683-14025775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-183
               

               Cow position:
               chr18:12028118-12028300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               102, 44
               

               Conread position:
               1-188
               

               Cow position:
               chr18:465299-465487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 46
               

               Conread position:
               1-188
               

               Cow position:
               chr18:18425618-18425421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               6-183
               

               Cow position:
               chr18:4490969-4490795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 5
               

               Conread position:
               20-194
               

               Cow position:
               chr18:366027-365847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 176
               

               Conread position:
               35-192
               

               Cow position:
               chr18:50053450-50053286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               601-719
               

               Cow position:
               chr18:20391382-20391266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr18:21751555-21751439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               608-718
               

               Cow position:
               chr18:27079036-27078927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr18:52251688-52251796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-137
               

               Cow position:
               chr19:29087924-29087783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               4-189
               

               Cow position:
               chr19:45594071-45594264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               27, 41
               

               Conread position:
               27-175
               

               Cow position:
               chr19:48777478-48777619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               31-192
               

               Cow position:
               chr19:8450803-8450637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               591-719
               

               Cow position:
               chr19:17676849-17676719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               598-719
               

               Cow position:
               chr19:29139406-29139285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-713
               

               Cow position:
               chr19:22838458-22838347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr19:51294087-51294205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr19:55590431-55590315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               606-717
               

               Cow position:
               chr19:52728804-52728697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr19:8185396-8185286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr19:24068090-24068201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               609-713
               

               Cow position:
               chr19:27968504-27968607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               609-716
               

               Cow position:
               chr19:17355049-17354942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-159
               

               Cow position:
               chr2:40015332-40015170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 73
               

               Conread position:
               1-183
               

               Cow position:
               chr2:44078639-44078451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               2-192
               

               Cow position:
               chr2:36661173-36660977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               3-187
               

               Cow position:
               chr2:1332225-1332039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               3-192
               

               Cow position:
               chr2:38876457-38876262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               4-187
               

               Cow position:
               chr2:37076647-37076833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               26, 168
               

               Conread position:
               4-192
               

               Cow position:
               chr2:2370572-2370374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               17-192
               

               Cow position:
               chr2:10970143-10970324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               27-175
               

               Cow position:
               chr2:47839267-47839420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 67
               

               Conread position:
               27-189
               

               Cow position:
               chr2:16364389-16364558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               28-181
               

               Cow position:
               chr2:46296775-46296617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               28-190
               

               Cow position:
               chr2:46262982-46263147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               78, 61
               

               Conread position:
               29-193
               

               Cow position:
               chr2:69641403-69641235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 163
               

               Conread position:
               568-719
               

               Cow position:
               chr2:8747705-8747854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 31
               

               Conread position:
               584-701
               

               Cow position:
               chr2:1358530-1358649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               599-719
               

               Cow position:
               chr2:13369869-13369749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-717
               

               Cow position:
               chr2:67302228-67302113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 105
               

               Conread position:
               602-719
               

               Cow position:
               chr2:67810831-67810948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               605-719
               

               Cow position:
               chr2:72359425-72359540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr2:42897871-42897760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr2:73924018-73923907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               610-713
               

               Cow position:
               chr2:36124634-36124531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               610-717
               

               Cow position:
               chr2:85794768-85794875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               612-717
               

               Cow position:
               chr2:21382650-21382756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               3-164
               

               Cow position:
               chr20:24329227-24329394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               30, 46
               

               Conread position:
               4-192
               

               Cow position:
               chr20:3314952-3314760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               95, 68
               

               Conread position:
               24-183
               

               Cow position:
               chr20:7161071-7160907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               28-182
               

               Cow position:
               chr20:34971995-34971836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               42, 118
               

               Conread position:
               29-187
               

               Cow position:
               chr20:35423608-35423447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               30-189
               

               Cow position:
               chr20:40436828-40436987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               50, 59
               

               Conread position:
               568-717
               

               Cow position:
               chr20:29845341-29845189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               18, 31
               

               Conread position:
               576-719
               

               Cow position:
               chr20:4944972-4945117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               602-717
               

               Cow position:
               chr20:4891867-4891980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               605-717
               

               Cow position:
               chr20:7658977-7659090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               609-719
               

               Cow position:
               chr20:18500775-18500664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               610-719
               

               Cow position:
               chr20:19201777-19201668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-718
               

               Cow position:
               chr20:33434917-33435022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr20:14283165-14283057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-180
               

               Cow position:
               chr21:3396085-3396271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               1-192
               

               Cow position:
               chr21:34743689-34743500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 56
               

               Conread position:
               2-152
               

               Cow position:
               chr21:48596126-48596286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               21-192
               

               Cow position:
               chr21:45501693-45501518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               34-192
               

               Cow position:
               chr21:24237923-24237761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               52-192
               

               Cow position:
               chr21:3250792-3250932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               45, 119
               

               Conread position:
               546-719
               

               Cow position:
               chr21:10264364-10264190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               10, 58
               

               Conread position:
               570-719
               

               Cow position:
               chr21:23536019-23535867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               576-719
               

               Cow position:
               chr21:15444783-15444927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr21:18578296-18578413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr21:19236696-19236813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               604-719
               

               Cow position:
               chr21:41621398-41621283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               605-719
               

               Cow position:
               chr21:20153226-20153111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr21:26828708-26828816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr21:27677746-27677638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr21:31278451-31278343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr21:37706149-37706257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               612-717
               

               Cow position:
               chr21:29069061-29069166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               614-720
               

               Cow position:
               chr21:27711974-27712080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-182
               

               Cow position:
               chr22:29053800-29053983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 41
               

               Conread position:
               1-231
               

               Cow position:
               chr22:4680371-4680140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               29, 147
               

               Conread position:
               3-188
               

               Cow position:
               chr22:24924291-24924479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               100, 184
               

               Conread position:
               17-187
               

               Cow position:
               chr22:6708372-6708548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               23-183
               

               Cow position:
               chr22:39875495-39875661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               12, 113
               

               Conread position:
               27-203
               

               Cow position:
               chr22:27706432-27706615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               55, 61
               

               Conread position:
               28-215
               

               Cow position:
               chr22:9752893-9753084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               68, 138
               

               Conread position:
               563-719
               

               Cow position:
               chr22:5837502-5837349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               580-705
               

               Cow position:
               chr22:16291703-16291830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               15, 116
               

               Conread position:
               583-719
               

               Cow position:
               chr22:22860689-22860821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               598-719
               

               Cow position:
               chr22:16541439-16541561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               602-718
               

               Cow position:
               chr22:1776267-1776152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr22:9075615-9075498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               44, 6
               

               Conread position:
               602-719
               

               Cow position:
               chr22:11790191-11790074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr22:16639513-16639395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr22:27681928-27681812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr22:35215756-35215639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr22:35627555-35627438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               604-719
               

               Cow position:
               chr22:5644221-5644336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               610-692
               

               Cow position:
               chr22:23440078-23440160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               74
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               610-713
               

               Cow position:
               chr22:16813992-16813893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               615-719
               

               Cow position:
               chr22:35578584-35578688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-164
               

               Cow position:
               chr23:20785169-20785011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 72
               

               Conread position:
               1-187
               

               Cow position:
               chr23:37098614-37098423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-192
               

               Cow position:
               chr23:31608910-31608714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 73
               

               Conread position:
               4-169
               

               Cow position:
               chr23:10720735-10720906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               27-188
               

               Cow position:
               chr23:38356955-38356789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               40, 30
               

               Conread position:
               27-189
               

               Cow position:
               chr23:1142123-1141958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               76, 60
               

               Conread position:
               27-189
               

               Cow position:
               chr23:3294976-3294811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               76, 68
               

               Conread position:
               116-561
               

               Cow position:
               chr23:26595706-26596165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               567-719
               

               Cow position:
               chr23:4003893-4003743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               570-719
               

               Cow position:
               chr23:4521636-4521788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               587-719
               

               Cow position:
               chr23:5436777-5436907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               599-718
               

               Cow position:
               chr23:1337093-1337212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               601-717
               

               Cow position:
               chr23:1739669-1739553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-707
               

               Cow position:
               chr23:580391-580496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-718
               

               Cow position:
               chr23:18739247-18739365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               10, 116
               

               Conread position:
               602-720
               

               Cow position:
               chr23:11081469-11081352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               603-693
               

               Cow position:
               chr23:24685450-24685360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               77
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               609-719
               

               Cow position:
               chr23:5605469-5605359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               609-719
               

               Cow position:
               chr23:5612729-5612619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               610-716
               

               Cow position:
               chr23:24718600-24718702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               611-717
               

               Cow position:
               chr23:35656611-35656506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr23:307660-307552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr23:2110980-2110873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr23:4291559-4291451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-187
               

               Cow position:
               chr24:16618584-16618774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 7
               

               Conread position:
               3-192
               

               Cow position:
               chr24:28760189-28760008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               24, 48
               

               Conread position:
               5-187
               

               Cow position:
               chr24:26694258-26694445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               5-192
               

               Cow position:
               chr24:39799395-39799587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               25, 36
               

               Conread position:
               35-210
               

               Cow position:
               chr24:31220554-31220377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               62, 89
               

               Conread position:
               599-719
               

               Cow position:
               chr24:21606490-21606609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr24:18874636-18874753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr24:38427926-38428043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               603-719
               

               Cow position:
               chr24:27066413-27066298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr24:38693702-38693809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr24:39910856-39910964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               627-719
               

               Cow position:
               chr24:7917220-7917312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               78
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-183
               

               Cow position:
               chr25:8543375-8543561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               4-191
               

               Cow position:
               chr25:6260995-6261181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               27-183
               

               Cow position:
               chr25:20374793-20374952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 41
               

               Conread position:
               27-189
               

               Cow position:
               chr25:36544666-36544832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               76, 67
               

               Conread position:
               32-192
               

               Cow position:
               chr25:6941392-6941556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               38, 162
               

               Conread position:
               35-190
               

               Cow position:
               chr25:11256690-11256845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               66, 24
               

               Conread position:
               600-719
               

               Cow position:
               chr25:33272846-33272727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-717
               

               Cow position:
               chr25:4521635-4521747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr25:11096028-11096146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               610-713
               

               Cow position:
               chr25:26679425-26679324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               610-717
               

               Cow position:
               chr25:24115117-24115222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               623-719
               

               Cow position:
               chr25:11855362-11855458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               80
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-157
               

               Cow position:
               chr26:25752783-25752626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 137
               

               Conread position:
               2-187
               

               Cow position:
               chr26:16446763-16446570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               23-192
               

               Cow position:
               chr26:19175205-19175041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               68, 79
               

               Conread position:
               29-192
               

               Cow position:
               chr26:32795924-32795757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               42, 165
               

               Conread position:
               42-183
               

               Cow position:
               chr26:18537919-18537774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               583-719
               

               Cow position:
               chr26:8811719-8811582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               605-719
               

               Cow position:
               chr26:1041224-1041110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr26:10764433-10764323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               610-719
               

               Cow position:
               chr26:32830300-32830191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr26:15908545-15908653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr27:4474508-4474661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 20
               

               Conread position:
               1-188
               

               Cow position:
               chr27:5629178-5629365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               59, 16
               

               Conread position:
               1-191
               

               Cow position:
               chr27:26447460-26447656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               6-188
               

               Cow position:
               chr27:21161708-21161530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               21, 119
               

               Conread position:
               27-188
               

               Cow position:
               chr27:25387425-25387591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               30-195
               

               Cow position:
               chr27:26448132-26447957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               38-187
               

               Cow position:
               chr27:22727445-22727291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 8
               

               Conread position:
               551-719
               

               Cow position:
               chr27:27740597-27740428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               579-719
               

               Cow position:
               chr27:13875458-13875598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               585-719
               

               Cow position:
               chr27:31373241-31373107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               599-719
               

               Cow position:
               chr27:2592282-2592404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               602-717
               

               Cow position:
               chr27:28922148-28922032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr27:16275932-16275817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               603-719
               

               Cow position:
               chr27:18507394-18507512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               605-718
               

               Cow position:
               chr27:27012445-27012560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               605-719
               

               Cow position:
               chr27:11480887-11480774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               605-719
               

               Cow position:
               chr27:26467810-26467696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               608-717
               

               Cow position:
               chr27:31157564-31157673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               612-719
               

               Cow position:
               chr27:23232670-23232777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-192
               

               Cow position:
               chr28:18216853-18216655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               31, 131
               

               Conread position:
               3-207
               

               Cow position:
               chr28:5969748-5969962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               17-182
               

               Cow position:
               chr28:32009110-32008941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               31-187
               

               Cow position:
               chr28:3777635-3777478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               496-719
               

               Cow position:
               chr28:17620041-17620263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               114, 9
               

               Conread position:
               572-719
               

               Cow position:
               chr28:19127930-19128076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               601-719
               

               Cow position:
               chr28:8347948-8347830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-717
               

               Cow position:
               chr28:751441-751326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr28:8165000-8165117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr28:16964749-16964868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr28:19262371-19262488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr28:14657923-14657812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-717
               

               Cow position:
               chr28:6563690-6563796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               85
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr28:6301288-6301180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr28:16200536-16200644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               612-717
               

               Cow position:
               chr28:2821464-2821359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-197
               

               Cow position:
               chr29:4245534-4245727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               2-164
               

               Cow position:
               chr29:13562288-13562455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 73
               

               Conread position:
               2-190
               

               Cow position:
               chr29:27059330-27059524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 45
               

               Conread position:
               4-192
               

               Cow position:
               chr29:45620197-45620388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 118
               

               Conread position:
               21-190
               

               Cow position:
               chr29:29457550-29457725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               29-189
               

               Cow position:
               chr29:9718095-9718257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 90
               

               Conread position:
               602-719
               

               Cow position:
               chr29:38732362-38732245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               610-717
               

               Cow position:
               chr29:36357327-36357220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               610-719
               

               Cow position:
               chr29:15947368-15947259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr29:17297336-17297228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-162
               

               Cow position:
               chr3:51413399-51413569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-183
               

               Cow position:
               chr3:68543675-68543484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               2-163
               

               Cow position:
               chr3:19247520-19247686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               28, 59
               

               Conread position:
               17-159
               

               Cow position:
               chr3:26797655-26797511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               10, 50
               

               Conread position:
               27-175
               

               Cow position:
               chr3:9005364-9005518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               30-192
               

               Cow position:
               chr3:2810657-2810492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               71, 100
               

               Conread position:
               36-192
               

               Cow position:
               chr3:61962682-61962525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               43-189
               

               Cow position:
               chr3:24920623-24920774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               574-719
               

               Cow position:
               chr3:7408646-7408505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               595-719
               

               Cow position:
               chr3:11281960-11281836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               599-719
               

               Cow position:
               chr3:66563974-66563852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr3:61680502-61680384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               605-719
               

               Cow position:
               chr3:72626561-72626676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr3:43388947-43389058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               609-718
               

               Cow position:
               chr3:80958332-80958441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               609-719
               

               Cow position:
               chr3:61023844-61023953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               609-719
               

               Cow position:
               chr3:76168452-76168562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-718
               

               Cow position:
               chr3:62186333-62186222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               611-720
               

               Cow position:
               chr3:75974904-75975013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-188
               

               Cow position:
               chr4:12261295-12261483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 147
               

               Conread position:
               1-192
               

               Cow position:
               chr4:31180449-31180645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               2-191
               

               Cow position:
               chr4:52120075-52120268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               101, 157
               

               Conread position:
               19-192
               

               Cow position:
               chr4:1921696-1921866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               27-175
               

               Cow position:
               chr4:19678485-19678631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               80, 35
               

               Conread position:
               42-192
               

               Cow position:
               chr4:27766347-27766498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 91
               

               Conread position:
               602-703
               

               Cow position:
               chr4:3283254-3283356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr4:5250390-5250274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               611-704
               

               Cow position:
               chr4:64336087-64336180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr4:22138025-22138134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr4:67393286-67393178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-187
               

               Cow position:
               chr5:27991213-27991403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-187
               

               Cow position:
               chr5:45221997-45222184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               102, 27
               

               Conread position:
               1-192
               

               Cow position:
               chr5:47706275-47706464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               105, 68
               

               Conread position:
               1-193
               

               Cow position:
               chr5:44114310-44114112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               55, 68
               

               Conread position:
               17-190
               

               Cow position:
               chr5:48008847-48009020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               14, 53
               

               Conread position:
               35-192
               

               Cow position:
               chr5:16055839-16055997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               68, 34
               

               Conread position:
               568-717
               

               Cow position:
               chr5:39815233-39815380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 29
               

               Conread position:
               569-706
               

               Cow position:
               chr5:18084200-18084333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               579-719
               

               Cow position:
               chr5:54712806-54712950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               594-719
               

               Cow position:
               chr5:15413342-15413216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               601-719
               

               Cow position:
               chr5:55949442-55949559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr5:7012614-7012731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr5:57447428-57447546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               603-717
               

               Cow position:
               chr5:25447121-25447006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               604-717
               

               Cow position:
               chr5:74690019-74690132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               605-713
               

               Cow position:
               chr5:12902151-12902043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               605-716
               

               Cow position:
               chr5:30253972-30253864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               605-719
               

               Cow position:
               chr5:34347501-34347615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               608-720
               

               Cow position:
               chr5:42064436-42064324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               612-719
               

               Cow position:
               chr5:35235462-35235569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-154
               

               Cow position:
               chr6:18788173-18788020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               29, 46
               

               Conread position:
               1-187
               

               Cow position:
               chr6:16550608-16550421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               29, 84
               

               Conread position:
               3-192
               

               Cow position:
               chr6:43752084-43751890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               4-186
               

               Cow position:
               chr6:5668523-5668703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               26, 91
               

               Conread position:
               4-193
               

               Cow position:
               chr6:8956579-8956776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               27-187
               

               Cow position:
               chr6:10428321-10428483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               27-188
               

               Cow position:
               chr6:12561851-12562017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               579-719
               

               Cow position:
               chr6:57079697-57079557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               599-719
               

               Cow position:
               chr6:19696059-19695940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               600-719
               

               Cow position:
               chr6:54821084-54820965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-718
               

               Cow position:
               chr6:16137519-16137635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr6:8186938-8187056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr6:54828071-54828189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               608-711
               

               Cow position:
               chr6:28561926-28562029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr6:16738857-16738746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               609-712
               

               Cow position:
               chr6:51019392-51019289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr6:19936329-19936437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               615-719
               

               Cow position:
               chr6:15937617-15937721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-189
               

               Cow position:
               chr7:33891046-33890853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               2-187
               

               Cow position:
               chr7:3168636-3168451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               18, 72
               

               Conread position:
               17-192
               

               Cow position:
               chr7:26792383-26792202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               34-192
               

               Cow position:
               chr7:24020701-24020862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               69, 117
               

               Conread position:
               565-719
               

               Cow position:
               chr7:40308228-40308383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 135
               

               Conread position:
               590-719
               

               Cow position:
               chr7:54108603-54108736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               599-719
               

               Cow position:
               chr7:52591747-52591867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-713
               

               Cow position:
               chr7:35088910-35088799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-717
               

               Cow position:
               chr7:11784795-11784906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               602-717
               

               Cow position:
               chr7:14496369-14496485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr7:12484551-12484435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr7:53579139-53579255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr7:64384861-64384979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr7:12342749-12342860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               609-717
               

               Cow position:
               chr7:36665570-36665459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               69, 16
               

               Conread position:
               611-719
               

               Cow position:
               chr7:49068597-49068705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               43, 47
               

               Conread position:
               611-719
               

               Cow position:
               chr7:53834347-53834455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               615-717
               

               Cow position:
               chr7:46149380-46149276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1-167
               

               Cow position:
               chr8:21977090-21977263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 43
               

               Conread position:
               1-186
               

               Cow position:
               chr8:33518879-33518689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-192
               

               Cow position:
               chr8:35410-35603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               28, 145
               

               Conread position:
               5-165
               

               Cow position:
               chr8:7674914-7675073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               24-189
               

               Cow position:
               chr8:51492276-51492107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               27-192
               

               Cow position:
               chr8:38366712-38366552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               42-192
               

               Cow position:
               chr8:53110696-53110851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               32, 93
               

               Conread position:
               564-719
               

               Cow position:
               chr8:45351988-45352146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               602-717
               

               Cow position:
               chr8:37291867-37291984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr8:5385462-5385580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr8:27731260-27731142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               611-719
               

               Cow position:
               chr8:32332261-32332369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               34-189
               

               Cow position:
               chr9:56293121-56292964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               68, 9
               

               Conread position:
               36-192
               

               Cow position:
               chr9:34166603-34166758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               63, 9
               

               Conread position:
               601-719
               

               Cow position:
               chr9:31344790-31344672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-717
               

               Cow position:
               chr9:26102553-26102668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-717
               

               Cow position:
               chr9:41470280-41470164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               602-719
               

               Cow position:
               chr9:28315245-28315364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               605-719
               

               Cow position:
               chr9:12495038-12495152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               608-719
               

               Cow position:
               chr9:61019538-61019427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               609-719
               

               Cow position:
               chr9:34423446-34423556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-163
               

               Cow position:
               chrX:29427046-29426876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-183
               

               Cow position:
               chrX:19048938-19049125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               29, 54
               

               Conread position:
               1-186
               

               Cow position:
               chrX:34635395-34635209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               29, 43
               

               Conread position:
               1-190
               

               Cow position:
               chrX:25180563-25180751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 60
               

               Conread position:
               8-187
               

               Cow position:
               chrX:3513102-3512923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 11
               

               Conread position:
               26-189
               

               Cow position:
               chrX:7491545-7491710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 78
               

               Conread position:
               35-186
               

               Cow position:
               chrX:19738225-19738381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               35, 53
               

               Conread position:
               42-194
               

               Cow position:
               chrX:16901291-16901445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               61, 53
               

               Conread position:
               553-715
               

               Cow position:
               chrX:783734-783570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               6, 162
               

               Conread position:
               580-716
               

               Cow position:
               chrX:31489777-31489644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               583-717
               

               Cow position:
               chrX:31279671-31279801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               599-719
               

               Cow position:
               chrX:34193840-34193960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               599-719
               

               Cow position:
               chrX:35285415-35285294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               599-719
               

               Cow position:
               chrX:42159182-42159062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               599-719
               

               Cow position:
               chrX:42246941-42247061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               601-718
               

               Cow position:
               chrX:40337152-40337033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               15, 117
               

               Conread position:
               602-719
               

               Cow position:
               chrX:876610-876726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               602-719
               

               Cow position:
               chrX:4399355-4399241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               602-719
               

               Cow position:
               chrX:6559216-6559336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               602-719
               

               Cow position:
               chrX:8642281-8642165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               602-719
               

               Cow position:
               chrX:13924098-13923985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               602-719
               

               Cow position:
               chrX:42216396-42216509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               608-719
               

               Cow position:
               chrX:12095540-12095651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               608-719
               

               Cow position:
               chrX:44040408-44040297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               610-719
               

               Cow position:
               chrX:25815670-25815781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               611-717
               

               Cow position:
               chrX:19018600-19018708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               611-717
               

               Cow position:
               chrX:41215551-41215445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-718
               

               Cow position:
               chrX:8759851-8759744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-718
               

               Cow position:
               chrX:28068079-28067973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               611-719
               

               Cow position:
               chrX:1996223-1996331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-719
               

               Cow position:
               chrX:19356692-19356584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-719
               

               Cow position:
               chrX:42760481-42760373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
Conread position:	1-158
Cow position:	chr10:55147073-55147236 (view UCSC Genome Browser custom track)
Alignm length:	164
Alignm identity:	133
Alignm E-value:	7e-35
Alignm gaps (pig, cow):	26, 0
Conread position:	1-183
Cow position:	chr10:27687370-27687187 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	134
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	102, 67
Conread position:	1-197
Cow position:	chr10:45992878-45992680 (view UCSC Genome Browser custom track)
Alignm length:	201
Alignm identity:	144
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	102, 34
Conread position:	2-192
Cow position:	chr10:16749452-16749647 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	140
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	28, 0
Conread position:	6-189
Cow position:	chr10:25496694-25496882 (view UCSC Genome Browser custom track)
Alignm length:	190
Alignm identity:	136
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	24, 181
Conread position:	19-187
Cow position:	chr10:66369818-66369644 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	131
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	50, 0
Conread position:	29-183
Cow position:	chr10:40510987-40510829 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	117
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	62, 0
Conread position:	30-192
Cow position:	chr10:31057054-31056890 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	125
Alignm E-value:	8e-26
Alignm gaps (pig, cow):	72, 141
Conread position:	577-713
Cow position:	chr10:36855919-36856054 (view UCSC Genome Browser custom track)
Alignm length:	138
Alignm identity:	105
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	5, 14
Conread position:	591-719
Cow position:	chr10:16830189-16830316 (view UCSC Genome Browser custom track)
Alignm length:	129
Alignm identity:	99
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	109, 0
Conread position:	603-719
Cow position:	chr10:47182383-47182499 (view UCSC Genome Browser custom track)
Alignm length:	117
Alignm identity:	92
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	0, 0
Conread position:	608-719
Cow position:	chr10:15602000-15602111 (view UCSC Genome Browser custom track)
Alignm length:	112
Alignm identity:	91
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	0, 0
Conread position:	611-713
Cow position:	chr10:11966669-11966772 (view UCSC Genome Browser custom track)
Alignm length:	104
Alignm identity:	86
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	37, 0
Conread position:	611-717
Cow position:	chr10:9959393-9959287 (view UCSC Genome Browser custom track)
Alignm length:	107
Alignm identity:	87
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	0, 0
Conread position:	621-713
Cow position:	chr10:15383495-15383403 (view UCSC Genome Browser custom track)
Alignm length:	93
Alignm identity:	79
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	1-192
Cow position:	chr11:67966714-67966519 (view UCSC Genome Browser custom track)
Alignm length:	198
Alignm identity:	142
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	95, 39
Conread position:	5-187
Cow position:	chr11:42685417-42685231 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	130
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	19, 0
Conread position:	26-190
Cow position:	chr11:72088365-72088198 (view UCSC Genome Browser custom track)
Alignm length:	171
Alignm identity:	127
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	77, 42
Conread position:	538-719
Cow position:	chr11:75479760-75479947 (view UCSC Genome Browser custom track)
Alignm length:	190
Alignm identity:	137
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	5, 28
Conread position:	570-704
Cow position:	chr11:59744217-59744086 (view UCSC Genome Browser custom track)
Alignm length:	135
Alignm identity:	103
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	19, 0