Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8003G04.5 |
| Conread position: | 301-562 |
| Cow position: | chr1:578836-579115 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 24, 251 |
| Conread position: | 302-432 |
| Cow position: | chr1:57084193-57084321 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 29 |
| Conread position: | 308-428 |
| Cow position: | chr1:91026012-91025893 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 308-430 |
| Cow position: | chr1:81528576-81528456 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 308-430 |
| Cow position: | chr1:84245772-84245894 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-432 |
| Cow position: | chr1:43223576-43223697 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 308-432 |
| Cow position: | chr1:44097369-44097246 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 308-432 |
| Cow position: | chr1:89096606-89096730 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-433 |
| Cow position: | chr1:32496175-32496050 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-433 |
| Cow position: | chr1:95062936-95062812 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 308-474 |
| Cow position: | chr1:81112678-81112837 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 308-512 |
| Cow position: | chr1:71964885-71965105 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 116, 54 |
| Conread position: | 308-526 |
| Cow position: | chr1:27875871-27875650 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 308-542 |
| Cow position: | chr1:29891609-29891836 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 88, 56 |
| Conread position: | 308-546 |
| Cow position: | chr1:42059957-42060208 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 308-552 |
| Cow position: | chr1:16389855-16389596 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 76, 236 |
| Conread position: | 308-559 |
| Cow position: | chr1:33647441-33647705 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 89, 206 |
| Conread position: | 308-560 |
| Cow position: | chr1:92045508-92045244 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 235 |
| Conread position: | 308-562 |
| Cow position: | chr1:29726149-29726401 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 19, 114 |
| Conread position: | 308-562 |
| Cow position: | chr1:43584232-43583973 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 127, 172 |
| Conread position: | 308-562 |
| Cow position: | chr1:43588770-43589045 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 209 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 51, 57 |
| Conread position: | 308-562 |
| Cow position: | chr1:51822473-51822713 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 51, 57 |
| Conread position: | 308-562 |
| Cow position: | chr1:91777886-91777626 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 90, 132 |
| Conread position: | 310-554 |
| Cow position: | chr1:19555079-19555324 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 124, 174 |
| Conread position: | 427-561 |
| Cow position: | chr1:91972696-91972830 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 104 |
| Conread position: | 438-560 |
| Cow position: | chr1:54486142-54486018 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 438-562 |
| Cow position: | chr1:46345581-46345705 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 441-562 |
| Cow position: | chr1:45880106-45880226 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 443-562 |
| Cow position: | chr1:55167874-55167993 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-432 |
| Cow position: | chr10:8690121-8690245 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 38, 33 |
| Conread position: | 308-562 |
| Cow position: | chr10:17441540-17441277 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 80, 62 |
| Conread position: | 308-562 |
| Cow position: | chr10:31820771-31820498 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 97, 246 |
| Conread position: | 308-562 |
| Cow position: | chr10:68351781-68351511 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 95, 244 |
| Conread position: | 310-564 |
| Cow position: | chr10:36036050-36036314 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 124, 229 |
| Conread position: | 313-538 |
| Cow position: | chr10:31057199-31056967 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 108 |
| Conread position: | 330-561 |
| Cow position: | chr10:63688386-63688141 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 18 |
| Conread position: | 345-562 |
| Cow position: | chr10:27376474-27376707 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 204 |
| Conread position: | 396-562 |
| Cow position: | chr10:63711336-63711163 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 27, 133 |
| Conread position: | 427-562 |
| Cow position: | chr10:28021687-28021551 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 5 |
| Conread position: | 431-562 |
| Cow position: | chr10:19593841-19593964 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 433-562 |
| Cow position: | chr10:26932211-26932082 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 440-562 |
| Cow position: | chr10:48150237-48150357 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 290-562 |
| Cow position: | chr11:47884448-47884173 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 133, 92 |
| Conread position: | 308-430 |
| Cow position: | chr11:17706669-17706790 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 308-430 |
| Cow position: | chr11:75260087-75260211 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 308-432 |
| Cow position: | chr11:2421351-2421475 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-432 |
| Cow position: | chr11:5251892-5251769 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 308-432 |
| Cow position: | chr11:73450412-73450289 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 308-471 |
| Cow position: | chr11:6604972-6605140 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 123, 156 |
| Conread position: | 308-562 |
| Cow position: | chr11:48662737-48662467 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 44, 228 |
| Conread position: | 308-562 |
| Cow position: | chr11:55010849-55010578 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 308-562 |
| Cow position: | chr11:64125202-64125479 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 308-562 |
| Cow position: | chr11:82102965-82102694 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 59 |
| Conread position: | 313-467 |
| Cow position: | chr11:37915932-37916083 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 81, 120 |
| Conread position: | 315-562 |
| Cow position: | chr11:32600916-32601169 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 177 |
| Conread position: | 329-430 |
| Cow position: | chr11:33280052-33280153 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 331-562 |
| Cow position: | chr11:16197662-16197419 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 390-562 |
| Cow position: | chr11:8795920-8796086 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 149, 6 |
| Conread position: | 435-562 |
| Cow position: | chr11:40621160-40621286 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 439-562 |
| Cow position: | chr11:39660661-39660784 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-450 |
| Cow position: | chr12:12010359-12010219 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 308-528 |
| Cow position: | chr12:30922196-30922437 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 308-552 |
| Cow position: | chr12:24545019-24544766 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 308-562 |
| Cow position: | chr12:28545325-28545587 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 77, 19 |
| Conread position: | 312-563 |
| Cow position: | chr12:40929732-40929461 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 319-560 |
| Cow position: | chr12:4498044-4497800 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 26 |
| Conread position: | 330-562 |
| Cow position: | chr12:24176623-24176870 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 333-432 |
| Cow position: | chr12:32955009-32954911 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 396-542 |
| Cow position: | chr12:9956226-9956372 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 58, 39 |
| Conread position: | 424-562 |
| Cow position: | chr12:12009667-12009527 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 98 |
| Conread position: | 433-562 |
| Cow position: | chr12:30190135-30190264 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 439-562 |
| Cow position: | chr12:13024950-13024829 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 296-559 |
| Cow position: | chr13:20087044-20087320 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 42 |
| Conread position: | 308-450 |
| Cow position: | chr13:43360526-43360385 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 135, 10 |
| Conread position: | 308-522 |
| Cow position: | chr13:52282316-52282086 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 126, 100 |
| Conread position: | 308-530 |
| Cow position: | chr13:16045823-16045598 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 308-556 |
| Cow position: | chr13:42570989-42571254 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 308-560 |
| Cow position: | chr13:47645458-47645722 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 40 |
| Conread position: | 308-560 |
| Cow position: | chr13:61031006-61030735 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 308-562 |
| Cow position: | chr13:19546425-19546149 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 82, 17 |
| Conread position: | 308-562 |
| Cow position: | chr13:31494824-31495088 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 68, 233 |
| Conread position: | 308-562 |
| Cow position: | chr13:41843200-41843472 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 95, 230 |
| Conread position: | 329-562 |
| Cow position: | chr13:20606512-20606733 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 329-562 |
| Cow position: | chr13:34348496-34348757 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 330-429 |
| Cow position: | chr13:47664309-47664408 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 433-562 |
| Cow position: | chr13:12484860-12484989 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-562 |
| Cow position: | chr13:15591384-15591253 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 438-562 |
| Cow position: | chr13:28091465-28091343 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 444-562 |
| Cow position: | chr13:38463408-38463291 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 307-428 |
| Cow position: | chr14:7950767-7950883 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 308-432 |
| Cow position: | chr14:24445496-24445619 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 308-451 |
| Cow position: | chr14:7940053-7940193 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 308-494 |
| Cow position: | chr14:10082659-10082468 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 308-562 |
| Cow position: | chr14:16813847-16814118 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 70, 201 |
| Conread position: | 333-432 |
| Cow position: | chr14:3751657-3751558 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 391-562 |
| Cow position: | chr14:12186007-12185833 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 12 |
| Conread position: | 391-563 |
| Cow position: | chr14:48395419-48395241 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 148 |
| Conread position: | 433-562 |
| Cow position: | chr14:7950928-7951058 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 308-430 |
| Cow position: | chr15:12864023-12863904 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 308-432 |
| Cow position: | chr15:3727658-3727535 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 308-432 |
| Cow position: | chr15:26127521-26127645 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-557 |
| Cow position: | chr15:39499856-39500123 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 23, 205 |
| Conread position: | 308-560 |
| Cow position: | chr15:15214217-15213948 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 112, 34 |
| Conread position: | 308-562 |
| Cow position: | chr15:37365016-37364748 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 116, 165 |
| Conread position: | 309-526 |
| Cow position: | chr15:10314162-10313942 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 145, 33 |
| Conread position: | 312-560 |
| Cow position: | chr15:27867670-27867921 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 313-562 |
| Cow position: | chr15:45618298-45618555 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 122, 23 |
| Conread position: | 436-562 |
| Cow position: | chr15:7880729-7880601 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 36 |
| Conread position: | 436-562 |
| Cow position: | chr15:9012700-9012572 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 36 |
| Conread position: | 438-562 |
| Cow position: | chr15:11210307-11210182 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 308-428 |
| Cow position: | chr16:8786670-8786550 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-430 |
| Cow position: | chr16:45572859-45572980 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 308-432 |
| Cow position: | chr16:32884713-32884841 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 308-560 |
| Cow position: | chr16:54011511-54011779 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 308-562 |
| Cow position: | chr16:33129337-33129082 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 84, 51 |
| Conread position: | 308-562 |
| Cow position: | chr16:49898557-49898289 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 264 |
| Conread position: | 311-562 |
| Cow position: | chr16:51098586-51098314 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 86, 45 |
| Conread position: | 340-562 |
| Cow position: | chr16:27159391-27159143 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 38, 225 |
| Conread position: | 396-562 |
| Cow position: | chr16:56599393-56599220 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 33 |
| Conread position: | 427-562 |
| Cow position: | chr16:5249602-5249736 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 13 |
| Conread position: | 436-562 |
| Cow position: | chr16:32173851-32173977 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 27, 97 |
| Conread position: | 439-562 |
| Cow position: | chr16:52928295-52928175 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 440-552 |
| Cow position: | chr16:15878787-15878677 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 441-561 |
| Cow position: | chr16:9252415-9252296 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 457-562 |
| Cow position: | chr16:13994879-13994984 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 94, 75 |
| Conread position: | 307-432 |
| Cow position: | chr17:11124688-11124812 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 307-452 |
| Cow position: | chr17:22581771-22581629 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 308-430 |
| Cow position: | chr17:6763076-6762954 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-432 |
| Cow position: | chr17:5348295-5348417 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 308-432 |
| Cow position: | chr17:17641917-17642042 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 308-432 |
| Cow position: | chr17:21460942-21460819 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 308-474 |
| Cow position: | chr17:25546289-25546451 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 308-562 |
| Cow position: | chr17:12739875-12740126 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 85, 29 |
| Conread position: | 308-562 |
| Cow position: | chr17:20194097-20194373 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 89, 40 |
| Conread position: | 308-562 |
| Cow position: | chr17:38874907-38875177 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 162 |
| Conread position: | 309-450 |
| Cow position: | chr17:23564962-23564823 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 126, 39 |
| Conread position: | 311-562 |
| Cow position: | chr17:17902560-17902831 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 72, 12 |
| Conread position: | 337-552 |
| Cow position: | chr17:22043132-22042914 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 94, 147 |
| Conread position: | 432-562 |
| Cow position: | chr17:20318201-20318329 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 432-562 |
| Cow position: | chr17:21605495-21605621 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 437-562 |
| Cow position: | chr17:1554512-1554637 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 438-561 |
| Cow position: | chr17:21613517-21613396 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 438-562 |
| Cow position: | chr17:14610216-14610340 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 439-532 |
| Cow position: | chr17:18848188-18848281 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 79 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-562 |
| Cow position: | chr18:49899244-49898976 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 239 |
| Conread position: | 329-562 |
| Cow position: | chr18:34685911-34686152 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 332-562 |
| Cow position: | chr18:16634693-16634942 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 53, 87 |
| Conread position: | 434-528 |
| Cow position: | chr18:10050893-10050800 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 434-562 |
| Cow position: | chr18:23431011-23430886 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 438-562 |
| Cow position: | chr18:11694071-11693950 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 42 |
| Conread position: | 449-561 |
| Cow position: | chr18:26639616-26639728 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 88 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 449-561 |
| Cow position: | chr18:26762290-26762402 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 88 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 302-510 |
| Cow position: | chr19:48777324-48777539 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 94, 195 |
| Conread position: | 308-560 |
| Cow position: | chr19:14544028-14544266 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 308-561 |
| Cow position: | chr19:48049676-48049929 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 38, 64 |
| Conread position: | 308-562 |
| Cow position: | chr19:2602455-2602724 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 72, 241 |
| Conread position: | 325-562 |
| Cow position: | chr19:23664672-23664416 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 329-562 |
| Cow position: | chr19:38994705-38994457 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 340-528 |
| Cow position: | chr19:29088014-29087817 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 43 |
| Conread position: | 427-560 |
| Cow position: | chr19:46626559-46626692 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 45, 5 |
| Conread position: | 434-535 |
| Cow position: | chr19:22688586-22688485 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 440-562 |
| Cow position: | chr19:2477850-2477728 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 98, 56 |
| Conread position: | 307-448 |
| Cow position: | chr2:39796549-39796689 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 126 |
| Conread position: | 308-509 |
| Cow position: | chr2:35994922-35995125 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 104 |
| Conread position: | 308-524 |
| Cow position: | chr2:68224620-68224396 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 39 |
| Conread position: | 308-560 |
| Cow position: | chr2:45308840-45308570 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 112, 173 |
| Conread position: | 308-560 |
| Cow position: | chr2:82151675-82151405 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 77, 197 |
| Conread position: | 308-561 |
| Cow position: | chr2:86527899-86527625 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 243 |
| Conread position: | 308-562 |
| Cow position: | chr2:6938966-6938696 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 196 |
| Conread position: | 308-562 |
| Cow position: | chr2:14957186-14956917 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 308-562 |
| Cow position: | chr2:40473899-40474171 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 126, 189 |
| Conread position: | 308-562 |
| Cow position: | chr2:44204128-44204400 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 126, 235 |
| Conread position: | 308-564 |
| Cow position: | chr2:57449216-57449492 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 309-429 |
| Cow position: | chr2:39580178-39580298 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 310-562 |
| Cow position: | chr2:76037653-76037919 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 311-562 |
| Cow position: | chr2:19508534-19508807 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 74, 37 |
| Conread position: | 329-561 |
| Cow position: | chr2:15863607-15863855 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 329-562 |
| Cow position: | chr2:17949083-17948843 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 57, 154 |
| Conread position: | 329-562 |
| Cow position: | chr2:64167634-64167868 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 95, 66 |
| Conread position: | 330-451 |
| Cow position: | chr2:46408915-46409035 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 119, 102 |
| Conread position: | 330-562 |
| Cow position: | chr2:63090436-63090686 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 395-560 |
| Cow position: | chr2:56274395-56274561 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 422-557 |
| Cow position: | chr2:57381858-57381993 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 70 |
| Conread position: | 428-562 |
| Cow position: | chr2:81154376-81154514 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 14, 53 |
| Conread position: | 433-562 |
| Cow position: | chr2:82137434-82137563 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 109 |
| Conread position: | 435-563 |
| Cow position: | chr2:41061066-41060937 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 457-560 |
| Cow position: | chr2:82928459-82928357 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 308-542 |
| Cow position: | chr20:3315085-3314839 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 76, 11 |
| Conread position: | 309-557 |
| Cow position: | chr20:27651774-27652039 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 311-432 |
| Cow position: | chr20:35704869-35704749 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 312-428 |
| Cow position: | chr20:37345658-37345774 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 312-559 |
| Cow position: | chr20:19466635-19466377 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 218 |
| Conread position: | 314-562 |
| Cow position: | chr20:22402155-22401913 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 131, 168 |
| Conread position: | 386-562 |
| Cow position: | chr20:37396926-37397103 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 49, 5 |
| Conread position: | 442-564 |
| Cow position: | chr20:20711538-20711659 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 291-560 |
| Cow position: | chr21:35695871-35696152 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 42, 182 |
| Conread position: | 301-432 |
| Cow position: | chr21:24429075-24428943 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 65 |
| Conread position: | 302-562 |
| Cow position: | chr21:2854626-2854893 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 79, 54 |
| Conread position: | 308-430 |
| Cow position: | chr21:23639741-23639860 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 308-559 |
| Cow position: | chr21:1597953-1598211 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 48 |
| Conread position: | 308-560 |
| Cow position: | chr21:3789909-3790176 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 101, 91 |
| Conread position: | 308-562 |
| Cow position: | chr21:4510135-4510405 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 206 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 111, 204 |
| Conread position: | 308-562 |
| Cow position: | chr21:13391456-13391195 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 123, 47 |
| Conread position: | 326-542 |
| Cow position: | chr21:34743795-34743574 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 53, 161 |
| Conread position: | 332-560 |
| Cow position: | chr21:22513085-22513331 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 432-562 |
| Cow position: | chr21:26575857-26575727 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-562 |
| Cow position: | chr21:46770589-46770717 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 307-560 |
| Cow position: | chr22:10978088-10978352 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 67, 187 |
| Conread position: | 308-430 |
| Cow position: | chr22:45604977-45605100 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 51, 57 |
| Conread position: | 308-459 |
| Cow position: | chr22:26040124-26040268 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 308-542 |
| Cow position: | chr22:10468012-10467761 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 112, 229 |
| Conread position: | 308-562 |
| Cow position: | chr22:6555358-6555104 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 108, 132 |
| Conread position: | 309-562 |
| Cow position: | chr22:43969512-43969243 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 89, 164 |
| Conread position: | 313-428 |
| Cow position: | chr22:28532763-28532648 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 329-427 |
| Cow position: | chr22:3246870-3246772 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 428-562 |
| Cow position: | chr22:5459633-5459766 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 438-562 |
| Cow position: | chr22:22495589-22495712 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 308-430 |
| Cow position: | chr23:4456279-4456401 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-432 |
| Cow position: | chr23:38221255-38221133 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 308-432 |
| Cow position: | chr23:39491950-39492074 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 63 |
| Conread position: | 308-477 |
| Cow position: | chr23:4506557-4506391 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 92, 126 |
| Conread position: | 308-562 |
| Cow position: | chr23:6591189-6590920 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 106, 75 |
| Conread position: | 308-563 |
| Cow position: | chr23:2284633-2284362 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 48, 244 |
| Conread position: | 313-561 |
| Cow position: | chr23:4353098-4352831 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 412-562 |
| Cow position: | chr23:5914612-5914761 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 435-562 |
| Cow position: | chr23:22696227-22696099 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 439-562 |
| Cow position: | chr23:20076310-20076187 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-426 |
| Cow position: | chr24:28829553-28829671 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-562 |
| Cow position: | chr24:29502698-29502952 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 127 |
| Conread position: | 312-562 |
| Cow position: | chr24:26964339-26964083 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 79, 86 |
| Conread position: | 331-560 |
| Cow position: | chr24:12171709-12171487 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 77, 44 |
| Conread position: | 351-542 |
| Cow position: | chr24:40862561-40862767 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 86 |
| Conread position: | 438-557 |
| Cow position: | chr24:24264673-24264553 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 307-542 |
| Cow position: | chr25:12409072-12409325 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 96, 242 |
| Conread position: | 308-428 |
| Cow position: | chr25:15656500-15656380 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-430 |
| Cow position: | chr25:7493501-7493618 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 308-430 |
| Cow position: | chr25:24444700-24444579 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 308-432 |
| Cow position: | chr25:12254600-12254724 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 46, 55 |
| Conread position: | 308-432 |
| Cow position: | chr25:36818459-36818583 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-433 |
| Cow position: | chr25:11433781-11433904 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 308-554 |
| Cow position: | chr25:9836144-9835900 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 126 |
| Conread position: | 308-562 |
| Cow position: | chr25:7052923-7053174 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 108, 56 |
| Conread position: | 308-562 |
| Cow position: | chr25:12142508-12142757 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 37 |
| Conread position: | 308-562 |
| Cow position: | chr25:16117156-16116883 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 45, 246 |
| Conread position: | 330-562 |
| Cow position: | chr25:18563366-18563610 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 397-562 |
| Cow position: | chr25:23205454-23205625 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 427-542 |
| Cow position: | chr25:3691355-3691468 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 45, 11 |
| Conread position: | 431-562 |
| Cow position: | chr25:11487020-11486889 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 438-562 |
| Cow position: | chr25:16144077-16143954 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 74, 91 |
| Conread position: | 441-562 |
| Cow position: | chr25:8547591-8547713 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 306-562 |
| Cow position: | chr26:12188368-12188638 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 90, 241 |
| Conread position: | 308-433 |
| Cow position: | chr26:33702775-33702651 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 308-564 |
| Cow position: | chr26:5993316-5993040 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 332-543 |
| Cow position: | chr26:25752884-25752667 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 53, 196 |
| Conread position: | 308-420 |
| Cow position: | chr27:13705106-13705217 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 308-427 |
| Cow position: | chr27:22441779-22441660 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-430 |
| Cow position: | chr27:24715826-24715946 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 308-432 |
| Cow position: | chr27:1791194-1791073 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 308-560 |
| Cow position: | chr27:22277288-22277554 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 126, 237 |
| Conread position: | 308-560 |
| Cow position: | chr27:26465612-26465881 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 16, 21 |
| Conread position: | 308-562 |
| Cow position: | chr27:15218227-15218498 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 110, 87 |
| Conread position: | 308-562 |
| Cow position: | chr27:22629903-22630173 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 110, 34 |
| Conread position: | 309-432 |
| Cow position: | chr27:26124603-26124480 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 329-562 |
| Cow position: | chr27:24908726-24908974 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 34, 213 |
| Conread position: | 337-559 |
| Cow position: | chr27:13130996-13130763 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 60, 37 |
| Conread position: | 432-562 |
| Cow position: | chr27:15408672-15408798 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 17 |
| Conread position: | 438-560 |
| Cow position: | chr27:27285870-27285990 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 280-562 |
| Cow position: | chr28:29952958-29952661 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 307-562 |
| Cow position: | chr28:22193254-22192982 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 308-432 |
| Cow position: | chr28:18714289-18714169 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 308-559 |
| Cow position: | chr28:1435142-1435409 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 50 |
| Conread position: | 308-560 |
| Cow position: | chr28:5138005-5137740 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 308-560 |
| Cow position: | chr28:13773222-13773492 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 89, 133 |
| Conread position: | 308-560 |
| Cow position: | chr28:34697388-34697138 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 126, 22 |
| Conread position: | 309-432 |
| Cow position: | chr28:11095700-11095823 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 328-562 |
| Cow position: | chr28:1272730-1272972 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 106, 213 |
| Conread position: | 427-562 |
| Cow position: | chr28:5709282-5709148 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 87, 11 |
| Conread position: | 431-562 |
| Cow position: | chr28:23605673-23605803 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 432-562 |
| Cow position: | chr28:22833632-22833505 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 433-562 |
| Cow position: | chr28:742937-742812 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 439-562 |
| Cow position: | chr28:11209466-11209344 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 440-562 |
| Cow position: | chr28:8259107-8259228 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 307-542 |
| Cow position: | chr29:45228263-45228503 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 125, 20 |
| Conread position: | 308-430 |
| Cow position: | chr29:3335951-3335829 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-432 |
| Cow position: | chr29:29783604-29783480 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-433 |
| Cow position: | chr29:41021791-41021916 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-558 |
| Cow position: | chr29:4885525-4885260 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 93, 108 |
| Conread position: | 308-562 |
| Cow position: | chr29:9409451-9409722 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 91, 232 |
| Conread position: | 308-562 |
| Cow position: | chr29:10118609-10118350 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 332-451 |
| Cow position: | chr29:24135504-24135385 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 428-562 |
| Cow position: | chr29:41021954-41022087 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 10 |
| Conread position: | 431-562 |
| Cow position: | chr29:42498758-42498630 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 433-558 |
| Cow position: | chr29:20608582-20608455 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 12, 35 |
| Conread position: | 301-430 |
| Cow position: | chr3:71470722-71470851 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-432 |
| Cow position: | chr3:29842596-29842723 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 112 |
| Conread position: | 308-487 |
| Cow position: | chr3:21278090-21277920 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 92, 59 |
| Conread position: | 308-528 |
| Cow position: | chr3:63496082-63496319 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 164 |
| Conread position: | 308-532 |
| Cow position: | chr3:60492277-60492519 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 308-560 |
| Cow position: | chr3:62740109-62740384 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 212 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 80, 175 |
| Conread position: | 308-560 |
| Cow position: | chr3:84872071-84871800 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 68, 205 |
| Conread position: | 308-561 |
| Cow position: | chr3:60535744-60536002 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 97, 64 |
| Conread position: | 308-562 |
| Cow position: | chr3:41407950-41407697 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 89, 129 |
| Conread position: | 310-562 |
| Cow position: | chr3:61462711-61462445 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 74, 38 |
| Conread position: | 311-562 |
| Cow position: | chr3:51414870-51415143 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 330-562 |
| Cow position: | chr3:548325-548573 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 55, 14 |
| Conread position: | 332-562 |
| Cow position: | chr3:29497293-29497048 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 56, 34 |
| Conread position: | 402-560 |
| Cow position: | chr3:47749356-47749190 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 432-562 |
| Cow position: | chr3:9188259-9188389 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 436-562 |
| Cow position: | chr3:13508611-13508740 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 436-562 |
| Cow position: | chr3:29842868-29842994 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 438-560 |
| Cow position: | chr3:36748260-36748380 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 438-562 |
| Cow position: | chr3:32198042-32197923 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 438-562 |
| Cow position: | chr3:73427480-73427606 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 438-562 |
| Cow position: | chr3:83998566-83998688 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 308-432 |
| Cow position: | chr4:44847306-44847184 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 308-432 |
| Cow position: | chr4:45986618-45986494 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-432 |
| Cow position: | chr4:53659055-53659179 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-560 |
| Cow position: | chr4:10861251-10861010 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 308-560 |
| Cow position: | chr4:29028535-29028780 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 130, 38 |
| Conread position: | 308-561 |
| Cow position: | chr4:40677799-40677548 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 142, 88 |
| Conread position: | 308-562 |
| Cow position: | chr4:43404457-43404186 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 106, 242 |
| Conread position: | 309-554 |
| Cow position: | chr4:40252434-40252187 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 150, 136 |
| Conread position: | 309-561 |
| Cow position: | chr4:68407168-68407432 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 70, 178 |
| Conread position: | 311-562 |
| Cow position: | chr4:26692576-26692297 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 427-562 |
| Cow position: | chr4:11011724-11011589 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 433-561 |
| Cow position: | chr4:35046821-35046947 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 434-562 |
| Cow position: | chr4:67313601-67313727 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 438-562 |
| Cow position: | chr4:34914339-34914214 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 440-549 |
| Cow position: | chr4:32300759-32300650 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 40 |
| Conread position: | 307-562 |
| Cow position: | chr5:69526896-69526623 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 127, 242 |
| Conread position: | 308-430 |
| Cow position: | chr5:20188794-20188914 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 308-562 |
| Cow position: | chr5:42714201-42714465 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 127, 65 |
| Conread position: | 308-562 |
| Cow position: | chr5:51576917-51577189 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 77, 164 |
| Conread position: | 308-562 |
| Cow position: | chr5:75036700-75036435 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 9 |
| Conread position: | 311-448 |
| Cow position: | chr5:43463594-43463459 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 54 |
| Conread position: | 311-562 |
| Cow position: | chr5:48478621-48478888 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 89, 62 |
| Conread position: | 326-557 |
| Cow position: | chr5:44134577-44134827 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 9, 190 |
| Conread position: | 353-562 |
| Cow position: | chr5:72590567-72590792 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 65, 5 |
| Conread position: | 438-562 |
| Cow position: | chr5:29571996-29572121 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 438-562 |
| Cow position: | chr5:52002986-52002857 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 439-562 |
| Cow position: | chr5:36670188-36670310 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 292-562 |
| Cow position: | chr6:6812250-6811957 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 308-432 |
| Cow position: | chr6:434966-434842 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-432 |
| Cow position: | chr6:60174598-60174472 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 59 |
| Conread position: | 308-526 |
| Cow position: | chr6:48024159-48024383 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 86, 176 |
| Conread position: | 308-542 |
| Cow position: | chr6:48376412-48376642 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 91 |
| Conread position: | 308-546 |
| Cow position: | chr6:25810206-25810463 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 116, 49 |
| Conread position: | 308-560 |
| Cow position: | chr6:19709627-19709363 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 122, 9 |
| Conread position: | 315-558 |
| Cow position: | chr6:19443545-19443800 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 330-433 |
| Cow position: | chr6:49166736-49166633 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 333-560 |
| Cow position: | chr6:27998906-27998663 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 348-561 |
| Cow position: | chr6:27578480-27578253 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 427-560 |
| Cow position: | chr6:24304020-24303891 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 427-562 |
| Cow position: | chr6:35118678-35118812 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 436-562 |
| Cow position: | chr6:432611-432485 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 81, 99 |
| Conread position: | 436-562 |
| Cow position: | chr6:29334401-29334274 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 56 |
| Conread position: | 441-559 |
| Cow position: | chr6:35548823-35548940 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 302-422 |
| Cow position: | chr7:17220064-17219944 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-430 |
| Cow position: | chr7:10279212-10279092 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 308-432 |
| Cow position: | chr7:25851914-25851791 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 308-432 |
| Cow position: | chr7:43899672-43899796 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-437 |
| Cow position: | chr7:5026414-5026546 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 308-509 |
| Cow position: | chr7:1822651-1822854 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 46, 55 |
| Conread position: | 308-559 |
| Cow position: | chr7:16491798-16491525 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 124, 247 |
| Conread position: | 308-560 |
| Cow position: | chr7:14869358-14869087 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 308-562 |
| Cow position: | chr7:2270321-2270049 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 308-562 |
| Cow position: | chr7:11431267-11431009 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 168 |
| Conread position: | 308-562 |
| Cow position: | chr7:23456270-23456014 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 228 |
| Conread position: | 308-562 |
| Cow position: | chr7:40708500-40708758 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 308-562 |
| Cow position: | chr7:49211660-49211929 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 110, 30 |
| Conread position: | 308-562 |
| Cow position: | chr7:55697224-55696956 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 177 |
| Conread position: | 310-562 |
| Cow position: | chr7:28894870-28895134 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 112, 25 |
| Conread position: | 312-542 |
| Cow position: | chr7:23924131-23924355 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 206, 84 |
| Conread position: | 427-562 |
| Cow position: | chr7:57006181-57006315 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 433-562 |
| Cow position: | chr7:38094677-38094549 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 436-559 |
| Cow position: | chr7:6008527-6008404 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 95 |
| Conread position: | 440-560 |
| Cow position: | chr7:25851620-25851498 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 308-474 |
| Cow position: | chr8:54009568-54009406 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 308-558 |
| Cow position: | chr8:44484211-44483946 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 308-564 |
| Cow position: | chr8:44479122-44478852 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 86, 22 |
| Conread position: | 309-559 |
| Cow position: | chr8:51993701-51993961 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 50, 8 |
| Conread position: | 312-562 |
| Cow position: | chr8:9804470-9804738 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 122, 186 |
| Conread position: | 314-562 |
| Cow position: | chr8:18714888-18715153 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 331-564 |
| Cow position: | chr8:24631506-24631268 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 120, 17 |
| Conread position: | 391-562 |
| Cow position: | chr8:9076519-9076340 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 5 |
| Conread position: | 435-562 |
| Cow position: | chr8:34294111-34294234 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 435-562 |
| Cow position: | chr8:57532933-57532808 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 436-562 |
| Cow position: | chr8:48761080-48760954 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 307-561 |
| Cow position: | chr9:61139836-61140107 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 308-430 |
| Cow position: | chr9:36426030-36425908 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-432 |
| Cow position: | chr9:21900250-21900126 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-546 |
| Cow position: | chr9:61312705-61312453 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 126, 21 |
| Conread position: | 308-561 |
| Cow position: | chr9:51767780-51768054 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 308-562 |
| Cow position: | chr9:61445806-61446080 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 99, 40 |
| Conread position: | 309-433 |
| Cow position: | chr9:1020756-1020632 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 329-550 |
| Cow position: | chr9:25962735-25962516 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 76, 45 |
| Conread position: | 329-550 |
| Cow position: | chr9:25963032-25962813 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 76, 45 |
| Conread position: | 329-562 |
| Cow position: | chr9:17938412-17938165 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 57, 241 |
| Conread position: | 308-451 |
| Cow position: | chrX:40315904-40316046 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 308-546 |
| Cow position: | chrX:3513231-3512988 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 69, 130 |
| Conread position: | 308-558 |
| Cow position: | chrX:28859017-28859282 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 124, 195 |
| Conread position: | 312-429 |
| Cow position: | chrX:22437001-22436884 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 329-562 |
| Cow position: | chrX:18080469-18080714 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 54, 79 |
| Conread position: | 330-430 |
| Cow position: | chrX:31910682-31910583 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 330-561 |
| Cow position: | chrX:46813359-46813137 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 435-562 |
| Cow position: | chrX:40312375-40312502 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 103, 40 |
| Conread position: | 438-562 |
| Cow position: | chrX:21245904-21245779 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 439-562 |
| Cow position: | chrX:29035828-29035704 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 439-562 |
| Cow position: | chrX:46566799-46566920 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 92, 0 |