Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8009L03.5 |
| Conread position: | 7-245 |
| Cow position: | chr11:50368550-50368312 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 159, 167 |
| Conread position: | 73-368 |
| Cow position: | chr11:50368565-50368273 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 105, 34 |
| Conread position: | 133-413 |
| Cow position: | chr11:50368592-50368312 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 50 |
| Conread position: | 26-688 |
| Cow position: | chr13:24162813-24163478 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 387 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 49, 87 |
| Conread position: | 32-688 |
| Cow position: | chr13:22125092-22125752 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 382 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 82 |
| Conread position: | 1-688 |
| Cow position: | chr14:3061353-3060663 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 109 |
| Conread position: | 7-487 |
| Cow position: | chr14:433868-434348 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 92, 70 |
| Conread position: | 8-696 |
| Cow position: | chr14:3061430-3060739 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 410 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 247, 226 |
| Conread position: | 11-688 |
| Cow position: | chr14:680453-681133 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 403 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 82, 102 |
| Conread position: | 16-661 |
| Cow position: | chr14:25895265-25895913 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 372 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 334, 328 |
| Conread position: | 19-449 |
| Cow position: | chr14:3061083-3060653 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 309, 317 |
| Conread position: | 26-628 |
| Cow position: | chr14:3080265-3079659 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 346 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 73, 66 |
| Conread position: | 26-665 |
| Cow position: | chr14:25895107-25895749 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 369 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 324, 318 |
| Conread position: | 26-676 |
| Cow position: | chr14:3061496-3060843 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 401 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 49, 81 |
| Conread position: | 26-688 |
| Cow position: | chr14:447582-448247 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 382 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 62, 85 |
| Conread position: | 26-688 |
| Cow position: | chr14:680384-681049 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 373 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 236, 265 |
| Conread position: | 55-622 |
| Cow position: | chr14:680245-680815 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 329 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 204, 182 |
| Conread position: | 85-660 |
| Cow position: | chr14:3061686-3061111 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 339 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 103-662 |
| Cow position: | chr14:3080860-3080298 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 326 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 202, 209 |
| Conread position: | 109-688 |
| Cow position: | chr14:25895022-25895604 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 345 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 145, 133 |
| Conread position: | 110-326 |
| Cow position: | chr14:663326-663110 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 145, 127 |
| Conread position: | 110-601 |
| Cow position: | chr14:433887-434381 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 305 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 69, 59 |
| Conread position: | 110-657 |
| Cow position: | chr14:25895527-25896077 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 145, 136 |
| Conread position: | 115-696 |
| Cow position: | chr14:680221-680805 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 343 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 127, 157 |
| Conread position: | 200-661 |
| Cow position: | chr14:433809-434273 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 280 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 4-355 |
| Cow position: | chr15:48468836-48469184 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 347, 202 |
| Conread position: | 41-493 |
| Cow position: | chr15:48468789-48469238 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 48 |
| Conread position: | 56-622 |
| Cow position: | chr15:48468459-48469037 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 355 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 49 |
| Conread position: | 7-464 |
| Cow position: | chr17:41440645-41440188 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 273 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 251, 240 |
| Conread position: | 7-687 |
| Cow position: | chr17:41441065-41440385 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 98 |
| Conread position: | 7-696 |
| Cow position: | chr17:44467330-44468022 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 10-464 |
| Cow position: | chr17:44467753-44468207 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 80, 67 |
| Conread position: | 16-665 |
| Cow position: | chr17:44467675-44468327 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 221 |
| Conread position: | 16-666 |
| Cow position: | chr17:44467591-44468244 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 19-496 |
| Cow position: | chr17:41440801-41440324 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 285 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 96, 102 |
| Conread position: | 22-553 |
| Cow position: | chr17:44467849-44468380 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 316 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 69, 53 |
| Conread position: | 36-688 |
| Cow position: | chr17:41440868-41440213 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 389 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 161, 169 |
| Conread position: | 39-691 |
| Cow position: | chr17:41441117-41440462 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 395 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 220, 208 |
| Conread position: | 4-399 |
| Cow position: | chr18:47846629-47846234 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 71, 78 |
| Conread position: | 4-448 |
| Cow position: | chr18:54668804-54668363 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 278 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 187, 16 |
| Conread position: | 4-627 |
| Cow position: | chr18:56391459-56390833 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 177 |
| Conread position: | 7-245 |
| Cow position: | chr18:56391927-56391689 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 159, 167 |
| Conread position: | 7-499 |
| Cow position: | chr18:47846542-47846049 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 301 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 141, 121 |
| Conread position: | 9-621 |
| Cow position: | chr18:55497645-55497030 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 360 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 257, 228 |
| Conread position: | 16-244 |
| Cow position: | chr18:44818622-44818850 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 149, 158 |
| Conread position: | 16-687 |
| Cow position: | chr18:56329699-56329028 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 386 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 159, 150 |
| Conread position: | 18-696 |
| Cow position: | chr18:56391528-56390848 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 6 |
| Conread position: | 41-661 |
| Cow position: | chr18:56391590-56390967 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 73-368 |
| Cow position: | chr18:56391942-56391650 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 105, 34 |
| Conread position: | 109-688 |
| Cow position: | chr18:56329858-56329276 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 344 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 150, 138 |
| Conread position: | 110-488 |
| Cow position: | chr18:53610221-53609843 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 142, 123 |
| Conread position: | 113-658 |
| Cow position: | chr18:22844033-22843476 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 133-413 |
| Cow position: | chr18:56391969-56391689 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 45, 50 |
| Conread position: | 133-574 |
| Cow position: | chr18:54668846-54668402 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 267 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 293, 277 |
| Conread position: | 154-688 |
| Cow position: | chr18:22844331-22843791 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 323 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 29 |
| Conread position: | 177-682 |
| Cow position: | chr18:56329874-56329365 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 166, 151 |
| Conread position: | 257-496 |
| Cow position: | chr18:44818611-44818850 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 80, 70 |
| Conread position: | 380-592 |
| Cow position: | chr18:54687754-54687969 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 28 |
| Conread position: | 13-588 |
| Cow position: | chr21:12659399-12659977 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 338 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 382, 376 |
| Conread position: | 13-688 |
| Cow position: | chr21:12659063-12659741 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 392 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 249, 280 |
| Conread position: | 16-661 |
| Cow position: | chr21:12659318-12659966 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 382 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 542, 0 |
| Conread position: | 16-688 |
| Cow position: | chr21:12659150-12659825 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 89 |
| Conread position: | 25-688 |
| Cow position: | chr21:12658991-12659657 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 215 |
| Conread position: | 39-661 |
| Cow position: | chr21:12658837-12659462 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 370 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 387, 371 |
| Conread position: | 109-691 |
| Cow position: | chr21:12658991-12659576 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 110-688 |
| Cow position: | chr21:12608518-12607937 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 354 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 182-658 |
| Cow position: | chr21:12608530-12608051 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 286 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 75, 65 |
| Conread position: | 200-688 |
| Cow position: | chr21:12608596-12608105 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 228, 245 |
| Conread position: | 200-688 |
| Cow position: | chr21:12658830-12659321 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 128 |
| Conread position: | 3-452 |
| Cow position: | chr25:33506719-33507166 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 300 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 34, 22 |
| Conread position: | 4-399 |
| Cow position: | chr25:25652913-25653308 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 243, 253 |
| Conread position: | 4-696 |
| Cow position: | chr25:25652241-25652936 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 233 |
| Conread position: | 6-323 |
| Cow position: | chr25:22941325-22941005 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 91 |
| Conread position: | 7-414 |
| Cow position: | chr25:24385192-24384785 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 264 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 92, 82 |
| Conread position: | 7-484 |
| Cow position: | chr25:33530286-33530762 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 9-240 |
| Cow position: | chr25:3676134-3676365 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-696 |
| Cow position: | chr25:25652414-25653104 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 411 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 416, 406 |
| Conread position: | 10-329 |
| Cow position: | chr25:3676051-3676370 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 95 |
| Conread position: | 10-620 |
| Cow position: | chr25:33530204-33530817 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 374 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 149, 164 |
| Conread position: | 13-514 |
| Cow position: | chr25:3636500-3635999 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 171, 155 |
| Conread position: | 16-437 |
| Cow position: | chr25:3636413-3635992 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 82, 76 |
| Conread position: | 16-487 |
| Cow position: | chr25:25652841-25653312 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-591 |
| Cow position: | chr25:3663996-3664574 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 331 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 243, 226 |
| Conread position: | 16-696 |
| Cow position: | chr25:25652505-25653188 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 88 |
| Conread position: | 21-413 |
| Cow position: | chr25:4657479-4657087 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 120, 107 |
| Conread position: | 26-414 |
| Cow position: | chr25:33529089-33529477 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-658 |
| Cow position: | chr25:25652683-25653318 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 302 |
| Conread position: | 26-661 |
| Cow position: | chr25:25652599-25653237 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 84 |
| Conread position: | 34-658 |
| Cow position: | chr25:33530059-33530687 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 46 |
| Conread position: | 36-496 |
| Cow position: | chr25:34473508-34473965 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 125, 135 |
| Conread position: | 39-688 |
| Cow position: | chr25:25652192-25652844 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 518, 0 |
| Conread position: | 40-463 |
| Cow position: | chr25:3636557-3636134 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 202, 218 |
| Conread position: | 46-686 |
| Cow position: | chr25:24385405-24384762 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 65 |
| Conread position: | 59-508 |
| Cow position: | chr25:33529038-33529487 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 64, 55 |
| Conread position: | 91-541 |
| Cow position: | chr25:33506720-33507172 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 291 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 68, 91 |
| Conread position: | 109-398 |
| Cow position: | chr25:3676066-3676355 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 74 |
| Conread position: | 110-488 |
| Cow position: | chr25:22940525-22940147 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 95, 88 |
| Conread position: | 112-427 |
| Cow position: | chr25:34734016-34733701 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 138, 146 |
| Conread position: | 118-533 |
| Cow position: | chr25:3675991-3676406 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 59, 65 |
| Conread position: | 121-496 |
| Cow position: | chr25:4657463-4657088 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 144, 121 |
| Conread position: | 125-627 |
| Cow position: | chr25:24385410-24384905 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 117, 133 |
| Conread position: | 134-677 |
| Cow position: | chr25:3636547-3636001 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 326 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 32, 40 |
| Conread position: | 141-691 |
| Cow position: | chr25:3663953-3664506 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 331 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 142-601 |
| Cow position: | chr25:3675932-3676393 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 283 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 62, 24 |
| Conread position: | 198-688 |
| Cow position: | chr25:25652183-25652676 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 306 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 226, 215 |
| Conread position: | 203-558 |
| Cow position: | chr25:33506748-33507103 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 215, 232 |
| Conread position: | 206-628 |
| Cow position: | chr25:3636559-3636134 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 38, 31 |
| Conread position: | 208-688 |
| Cow position: | chr25:34473512-34473992 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 74, 80 |
| Conread position: | 217-661 |
| Cow position: | chr25:33530075-33530522 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 265 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 218-555 |
| Cow position: | chr25:4657450-4657113 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 35, 40 |
| Conread position: | 291-696 |
| Cow position: | chr25:3636558-3636150 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 294-691 |
| Cow position: | chr25:3663938-3664338 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 216, 209 |
| Conread position: | 301-696 |
| Cow position: | chr25:33529028-33529426 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 75, 65 |
| Conread position: | 349-696 |
| Cow position: | chr25:3675970-3676320 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 406-658 |
| Cow position: | chr25:4657430-4657175 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 111, 104 |
| Conread position: | 110-496 |
| Cow position: | chr28:34696071-34696457 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 231, 239 |
| Conread position: | 141-688 |
| Cow position: | chr28:34696018-34696568 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 327 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 21 |
| Conread position: | 1-696 |
| Cow position: | chr4:65350011-65350706 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 326 |
| Conread position: | 2-451 |
| Cow position: | chr4:65350345-65350794 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 12, 140 |
| Conread position: | 2-696 |
| Cow position: | chr4:65261913-65261224 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 428 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 117, 11 |
| Conread position: | 3-696 |
| Cow position: | chr4:65349929-65350622 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 589 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-549 |
| Cow position: | chr4:65703527-65702986 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 334 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 249, 16 |
| Conread position: | 7-325 |
| Cow position: | chr4:65494795-65494477 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-452 |
| Cow position: | chr4:65703611-65703166 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 35 |
| Conread position: | 10-326 |
| Cow position: | chr4:65702819-65702503 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 10-418 |
| Cow position: | chr4:65121591-65122000 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 268 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 5, 60 |
| Conread position: | 12-453 |
| Cow position: | chr4:65261575-65261133 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 241, 246 |
| Conread position: | 13-281 |
| Cow position: | chr4:65494705-65494437 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-324 |
| Cow position: | chr4:65121763-65122074 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-439 |
| Cow position: | chr4:65121686-65122105 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 98, 86 |
| Conread position: | 24-532 |
| Cow position: | chr4:65350286-65350791 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 310 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 225, 198 |
| Conread position: | 25-502 |
| Cow position: | chr4:65494951-65494468 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 98, 164 |
| Conread position: | 41-545 |
| Cow position: | chr4:65261630-65261124 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 307 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 50-601 |
| Cow position: | chr4:65121548-65122102 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 341 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 203, 190 |
| Conread position: | 82-696 |
| Cow position: | chr4:65703617-65703006 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 25 |
| Conread position: | 85-456 |
| Cow position: | chr4:65494798-65494430 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 247 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 107, 25 |
| Conread position: | 94-696 |
| Cow position: | chr4:65349768-65350373 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 168 |
| Conread position: | 109-622 |
| Cow position: | chr4:65494951-65494429 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 337 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 109-696 |
| Cow position: | chr4:65349867-65350457 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 64 |
| Conread position: | 111-606 |
| Cow position: | chr4:65261644-65261146 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 308 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 73, 57 |
| Conread position: | 116-537 |
| Cow position: | chr4:65702881-65702460 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 270 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 61, 67 |
| Conread position: | 117-687 |
| Cow position: | chr4:65261725-65261152 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 351 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 82, 128 |
| Conread position: | 119-548 |
| Cow position: | chr4:65703667-65703238 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 124, 139 |
| Conread position: | 132-592 |
| Cow position: | chr4:65121546-65122009 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 295 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 117, 105 |
| Conread position: | 139-662 |
| Cow position: | chr4:65495005-65494473 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 340 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 198-595 |
| Cow position: | chr4:65702883-65702483 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 55, 44 |
| Conread position: | 200-439 |
| Cow position: | chr4:65146417-65146656 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 46 |
| Conread position: | 203-696 |
| Cow position: | chr4:65703667-65703171 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 302 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 64, 59 |
| Conread position: | 218-696 |
| Cow position: | chr4:65495010-65494523 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 125, 109 |
| Conread position: | 291-696 |
| Cow position: | chr4:65702874-65702466 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 136, 123 |
| Conread position: | 12-688 |
| Cow position: | chr6:49428793-49429472 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 406 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 154, 159 |
| Conread position: | 13-696 |
| Cow position: | chr6:49428207-49428892 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 13 |
| Conread position: | 13-696 |
| Cow position: | chr6:49428290-49428976 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 127 |
| Conread position: | 16-696 |
| Cow position: | chr6:49428629-49429312 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 153 |
| Conread position: | 9-358 |
| Cow position: | chr7:28846565-28846914 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 104, 108 |
| Conread position: | 10-388 |
| Cow position: | chr7:28846482-28846860 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 168, 173 |
| Conread position: | 16-661 |
| Cow position: | chr7:12293329-12293977 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 383 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 59, 81 |
| Conread position: | 40-657 |
| Cow position: | chr7:12293269-12293889 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 385 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 136, 141 |
| Conread position: | 123-696 |
| Cow position: | chr7:12293268-12293844 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 349 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 121, 113 |
| Conread position: | 134-658 |
| Cow position: | chr7:28846438-28846965 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 317 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 43, 49 |
| Conread position: | 206-696 |
| Cow position: | chr7:12293267-12293760 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 309 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 226-658 |
| Cow position: | chr7:28846446-28846881 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 111, 104 |
| Conread position: | 34-548 |
| Cow position: | chrX:14181559-14181045 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 132, 140 |