Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8010E15.5 |
| Conread position: | 260-1056 |
| Cow position: | chr10:39446067-39445294 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 503 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 216, 262 |
| Conread position: | 270-1046 |
| Cow position: | chr10:28531223-28530435 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 244 |
| Conread position: | 316-528 |
| Cow position: | chr10:31535898-31536111 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 69, 54 |
| Conread position: | 318-651 |
| Cow position: | chr10:58592425-58592760 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 61, 226 |
| Conread position: | 333-640 |
| Cow position: | chr10:14924342-14924653 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 43, 141 |
| Conread position: | 336-536 |
| Cow position: | chr10:28531514-28531316 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 353-555 |
| Cow position: | chr10:2422942-2422740 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 26, 113 |
| Conread position: | 384-850 |
| Cow position: | chr10:25972046-25972507 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 139, 38 |
| Conread position: | 730-1055 |
| Cow position: | chr10:14924977-14925296 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 152, 27 |
| Conread position: | 840-1058 |
| Cow position: | chr10:25973362-25973591 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 174 |
| Conread position: | 933-1056 |
| Cow position: | chr10:50019183-50019060 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 312-710 |
| Cow position: | chr11:67387771-67388162 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 71, 188 |
| Conread position: | 453-1056 |
| Cow position: | chr11:12009252-12009841 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 399 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 64, 59 |
| Conread position: | 177-1056 |
| Cow position: | chr12:21229702-21228813 (view UCSC Genome Browser custom track) |
| Alignm length: | 917 |
| Alignm identity: | 557 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 85, 147 |
| Conread position: | 324-773 |
| Cow position: | chr12:3045583-3046022 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 70 |
| Conread position: | 726-1050 |
| Cow position: | chr12:3046787-3047114 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 142, 60 |
| Conread position: | 319-523 |
| Cow position: | chr14:35421748-35421950 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 394-712 |
| Cow position: | chr14:14319771-14319452 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 151, 37 |
| Conread position: | 334-1056 |
| Cow position: | chr15:7926836-7927562 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 122 |
| Conread position: | 596-1049 |
| Cow position: | chr15:2414688-2414245 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 291 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 151, 69 |
| Conread position: | 828-1056 |
| Cow position: | chr15:20080816-20080584 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 344-1056 |
| Cow position: | chr17:14309794-14309113 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 41 |
| Conread position: | 386-784 |
| Cow position: | chr17:20396906-20397296 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 159, 73 |
| Conread position: | 610-1056 |
| Cow position: | chr17:4285373-4285820 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 300 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 115, 42 |
| Conread position: | 300-870 |
| Cow position: | chr19:27041914-27041348 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 371 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 80, 36 |
| Conread position: | 312-486 |
| Cow position: | chr19:7067422-7067596 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 17 |
| Conread position: | 680-1046 |
| Cow position: | chr19:35978271-35978646 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 313-830 |
| Cow position: | chr20:2794308-2793797 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 322 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 70, 57 |
| Conread position: | 317-1022 |
| Cow position: | chr20:37578062-37578759 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 23 |
| Conread position: | 350-1056 |
| Cow position: | chr20:5463974-5464677 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 23 |
| Conread position: | 603-859 |
| Cow position: | chr20:2794385-2794133 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 241, 54 |
| Conread position: | 689-1050 |
| Cow position: | chr20:2792426-2792054 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 147, 86 |
| Conread position: | 926-1050 |
| Cow position: | chr22:15957514-15957390 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 286-881 |
| Cow position: | chr24:37077927-37077331 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 27 |
| Conread position: | 386-712 |
| Cow position: | chr24:27245052-27245369 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 159, 46 |
| Conread position: | 386-897 |
| Cow position: | chr24:16094459-16094959 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 343 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 132, 66 |
| Conread position: | 936-1056 |
| Cow position: | chr24:29373101-29372981 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-690 |
| Cow position: | chr26:11300520-11300821 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 133, 106 |
| Conread position: | 328-640 |
| Cow position: | chr27:11962050-11962360 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 214, 28 |
| Conread position: | 319-538 |
| Cow position: | chr28:22123613-22123394 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 323-859 |
| Cow position: | chr28:22123980-22123446 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 64 |
| Conread position: | 380-522 |
| Cow position: | chr28:3778547-3778403 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 95 |
| Conread position: | 398-988 |
| Cow position: | chr28:25024409-25023827 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 54 |
| Conread position: | 647-1050 |
| Cow position: | chr28:17210834-17210428 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 98, 14 |
| Conread position: | 129-263 |
| Cow position: | chr4:30281764-30281896 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 270-1055 |
| Cow position: | chr4:30281922-30282703 (view UCSC Genome Browser custom track) |
| Alignm length: | 800 |
| Alignm identity: | 592 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 216 |
| Conread position: | 384-1049 |
| Cow position: | chr4:39273619-39272944 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 279 |
| Conread position: | 304-531 |
| Cow position: | chr5:29455531-29455303 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 6, 219 |
| Conread position: | 384-1056 |
| Cow position: | chr5:7813260-7812587 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 20 |
| Conread position: | 310-1056 |
| Cow position: | chr6:49947575-49946832 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 10 |
| Conread position: | 386-636 |
| Cow position: | chr6:11399766-11400020 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 152, 97 |
| Conread position: | 851-1056 |
| Cow position: | chr6:37641612-37641828 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 319-701 |
| Cow position: | chr7:58549094-58549474 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 61, 138 |
| Conread position: | 376-968 |
| Cow position: | chr7:58549783-58550367 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 396 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 167, 115 |
| Conread position: | 260-1028 |
| Cow position: | chrX:22895095-22894322 (view UCSC Genome Browser custom track) |
| Alignm length: | 790 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 144 |