Cow genome map

Conread name: Ss1.1-Pig4-TMW8016A06.3

Conread position: 385-502
Cow position: chr1:88028921-88029036 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 386-505
Cow position: chr1:85338755-85338876 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 402-505
Cow position: chr1:76020035-76019932 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 402-505
Cow position: chr1:99136785-99136682 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-532
Cow position: chr1:95637187-95637319 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 403-505
Cow position: chr1:10881425-10881526 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 403-535
Cow position: chr1:77883297-77883430 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 403-672
Cow position: chr1:68827332-68827056 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 100, 204

Conread position: 408-497
Cow position: chr1:86578642-86578730 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 409-503
Cow position: chr1:71691466-71691560 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 543-672
Cow position: chr1:92437270-92437141 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 546-672
Cow position: chr1:81363719-81363842 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 22

Conread position: 547-651
Cow position: chr1:55429259-55429155 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 547-665
Cow position: chr1:73960425-73960544 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 547-667
Cow position: chr1:42175288-42175408 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 547-672
Cow position: chr1:52329803-52329679 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 548-671
Cow position: chr1:13614993-13614871 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 552-659
Cow position: chr1:39418388-39418282 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 552-671
Cow position: chr1:79663934-79663817 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 552-672
Cow position: chr1:84786501-84786620 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 554-655
Cow position: chr1:71797168-71797067 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-656
Cow position: chr1:61742236-61742133 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 91
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-656
Cow position: chr1:63311295-63311397 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 84, 80

Conread position: 554-656
Cow position: chr1:73756825-73756928 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 554-656
Cow position: chr1:91370744-91370642 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-657
Cow position: chr1:98412673-98412777 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 554-658
Cow position: chr1:51968202-51968306 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 62, 46

Conread position: 554-658
Cow position: chr1:96019004-96019107 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 554-659
Cow position: chr1:24133323-24133219 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-659
Cow position: chr1:79002221-79002119 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 554-659
Cow position: chr1:84456569-84456674 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr1:3752211-3752104 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 554-660
Cow position: chr1:10778306-10778411 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 84, 45

Conread position: 554-660
Cow position: chr1:26896093-26895987 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr1:35844198-35844092 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr1:41056416-41056521 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 554-660
Cow position: chr1:53595057-53595163 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 84, 80

Conread position: 554-660
Cow position: chr1:71748275-71748169 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr1:94226816-94226710 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr1:95637274-95637384 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 554-660
Cow position: chr1:101792367-101792260 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 554-662
Cow position: chr1:23634168-23634061 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position: chr1:1981380-1981269 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 554-663
Cow position: chr1:3739731-3739838 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 554-663
Cow position: chr1:3963351-3963459 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 554-663
Cow position: chr1:5289193-5289304 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 554-663
Cow position: chr1:18937101-18936993 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 554-663
Cow position: chr1:45007198-45007307 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr1:52564060-52563951 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 77

Conread position: 554-663
Cow position: chr1:53207963-53207854 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr1:82504699-82504807 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position: chr1:95499763-95499655 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-664
Cow position: chr1:24202007-24201897 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 99

Conread position: 554-664
Cow position: chr1:69264554-69264663 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-665
Cow position: chr1:44769377-44769269 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 554-665
Cow position: chr1:64678429-64678540 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr1:1053320-1053433 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr1:1991698-1991580 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 554-667
Cow position: chr1:3076657-3076550 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 554-667
Cow position: chr1:4026917-4027028 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 554-667
Cow position: chr1:8349577-8349466 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 554-667
Cow position: chr1:11226513-11226401 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr1:13637935-13637826 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 554-667
Cow position: chr1:22826898-22827014 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 554-667
Cow position: chr1:24235786-24235676 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr1:26934805-26934696 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 554-667
Cow position: chr1:31548570-31548681 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 554-667
Cow position: chr1:40062180-40062293 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr1:41004635-41004522 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 60

Conread position: 554-667
Cow position: chr1:41138622-41138510 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr1:42256778-42256663 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 554-667
Cow position: chr1:42887529-42887418 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 554-667
Cow position: chr1:43822109-43822221 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr1:48105701-48105589 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 554-667
Cow position: chr1:53374167-53374280 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 87, 80

Conread position: 554-667
Cow position: chr1:53495194-53495308 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 85

Conread position: 554-667
Cow position: chr1:55260698-55260586 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 554-667
Cow position: chr1:59019505-59019618 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 82

Conread position: 554-667
Cow position: chr1:60986701-60986816 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 554-667
Cow position: chr1:61564523-61564637 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 554-667
Cow position: chr1:61725381-61725268 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr1:69941236-69941120 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 554-667
Cow position: chr1:71325515-71325402 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr1:79590832-79590945 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 100
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr1:79844201-79844313 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 99
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr1:81355971-81355859 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr1:85338860-85338972 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 554-667
Cow position: chr1:89510200-89510088 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr1:94211966-94212078 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr1:99136698-99136586 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 554-668
Cow position: chr1:21131354-21131238 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 554-669
Cow position: chr1:666092-666207 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr1:2075596-2075481 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr1:21092823-21092938 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr1:22823669-22823783 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 554-669
Cow position: chr1:24528865-24528752 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 554-669
Cow position: chr1:29451606-29451721 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr1:37726643-37726527 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 105, 0

Conread position: 554-669
Cow position: chr1:44154994-44155108 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 554-669
Cow position: chr1:53308660-53308546 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-669
Cow position: chr1:55163654-55163769 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr1:55686487-55686374 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 554-669
Cow position: chr1:72813147-72813262 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr1:77099808-77099691 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 554-669
Cow position: chr1:84240632-84240746 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-669
Cow position: chr1:100132600-100132715 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr1:102647537-102647422 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-670
Cow position: chr1:11873623-11873509 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 554-670
Cow position: chr1:34159564-34159679 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-670
Cow position: chr1:65067220-65067105 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 554-670
Cow position: chr1:81859495-81859384 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr1:6760285-6760169 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr1:11772349-11772232 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr1:22728780-22728896 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 554-671
Cow position: chr1:29627183-29627066 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 102
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr1:31765663-31765548 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 554-671
Cow position: chr1:34000637-34000754 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr1:35162136-35162252 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr1:36920901-36920784 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr1:37887054-37886938 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 554-671
Cow position: chr1:38418807-38418924 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr1:42968582-42968469 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 554-671
Cow position: chr1:45289139-45289025 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 554-671
Cow position: chr1:46940130-46940014 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 554-671
Cow position: chr1:48444449-48444336 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 554-671
Cow position: chr1:56719045-56719165 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 78

Conread position: 554-671
Cow position: chr1:60665225-60665342 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 40

Conread position: 554-671
Cow position: chr1:61175915-61176032 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr1:61724293-61724176 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr1:61735707-61735590 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr1:68276139-68276255 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 554-671
Cow position: chr1:71691546-71691663 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr1:80336518-80336398 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 554-671
Cow position: chr1:82861505-82861623 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr1:87888135-87888251 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 554-671
Cow position: chr1:88338429-88338544 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 554-671
Cow position: chr1:89937631-89937511 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 554-671
Cow position: chr1:95176667-95176784 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr1:98562892-98563008 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 40

Conread position: 554-671
Cow position: chr1:99642638-99642519 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 554-672
Cow position: chr1:634923-635041 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr1:13548258-13548140 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr1:15547201-15547318 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 103
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr1:20125343-20125461 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 10

Conread position: 554-672
Cow position: chr1:20204757-20204876 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 554-672
Cow position: chr1:22448852-22448737 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 554-672
Cow position: chr1:30034278-30034395 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 554-672
Cow position: chr1:31499359-31499477 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr1:33719846-33719963 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr1:36613543-36613425 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr1:36874747-36874864 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 554-672
Cow position: chr1:42053593-42053474 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 554-672
Cow position: chr1:43211510-43211628 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 49, 62

Conread position: 554-672
Cow position: chr1:43380297-43380178 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 554-672
Cow position: chr1:51980959-51981077 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr1:52039369-52039486 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr1:52753434-52753316 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 103
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 80

Conread position: 554-672
Cow position: chr1:56228986-56229104 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr1:57305563-57305682 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 554-672
Cow position: chr1:57698724-57698604 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 82

Conread position: 554-672
Cow position: chr1:61304413-61304531 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 80

Conread position: 554-672
Cow position: chr1:68217628-68217509 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr1:72035197-72035080 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 554-672
Cow position: chr1:78783278-78783396 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 79

Conread position: 554-672
Cow position: chr1:79632365-79632247 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr1:80988078-80988196 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr1:81913420-81913302 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 103
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 78

Conread position: 554-672
Cow position: chr1:86113681-86113564 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 554-672
Cow position: chr1:88652363-88652480 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 85, 40

Conread position: 554-672
Cow position: chr1:96559074-96559191 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr1:98551449-98551562 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 555-656
Cow position: chr1:62964012-62964113 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 555-663
Cow position: chr1:72286316-72286209 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 555-664
Cow position: chr1:9437816-9437706 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 555-667
Cow position: chr1:7022192-7022303 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 555-667
Cow position: chr1:42874214-42874102 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr1:84282794-84282909 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 555-669
Cow position: chr1:54258300-54258414 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 555-669
Cow position: chr1:68253324-68253438 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr1:4027594-4027710 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr1:34300815-34300699 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr1:68282527-68282646 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 555-671
Cow position: chr1:89349710-89349826 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr1:57957125-57957008 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr1:61149799-61149683 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 555-672
Cow position: chr1:85361588-85361705 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr1:92976908-92976792 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 556-667
Cow position: chr1:1877761-1877872 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 97
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 556-667
Cow position: chr1:81613119-81613230 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position: chr1:54484801-54484916 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 5, 44

Conread position: 556-671
Cow position: chr1:90640759-90640873 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 43

Conread position: 556-672
Cow position: chr1:56225211-56225325 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 557-667
Cow position: chr1:53458440-53458551 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 557-671
Cow position: chr1:20950430-20950544 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 557-671
Cow position: chr1:80184004-80183890 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 558-667
Cow position: chr1:72304635-72304526 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 558-667
Cow position: chr1:76938261-76938152 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 558-671
Cow position: chr1:66898742-66898629 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 559-671
Cow position: chr1:90864563-90864451 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 559-671
Cow position: chr1:91817036-91816925 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 560-659
Cow position: chr1:72104884-72104983 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 560-660
Cow position: chr1:21954480-21954380 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 560-660
Cow position: chr1:52506806-52506707 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 560-667
Cow position: chr1:61005828-61005721 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 560-672
Cow position: chr1:22467668-22467780 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 73

Conread position: 561-667
Cow position: chr1:3323596-3323702 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 96

Conread position: 561-671
Cow position: chr1:41252664-41252554 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 561-671
Cow position: chr1:55146542-55146650 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 561-671
Cow position: chr1:63596321-63596211 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr1:78794996-78794886 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 562-667
Cow position: chr1:51628762-51628657 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 562-667
Cow position: chr1:100537550-100537655 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 562-671
Cow position: chr1:56748330-56748438 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 562-671
Cow position: chr1:81180240-81180131 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-671
Cow position: chr1:98023655-98023545 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 562-672
Cow position: chr1:33081284-33081174 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-672
Cow position: chr1:52510503-52510393 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 564-667
Cow position: chr1:16767343-16767240 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 564-671
Cow position: chr1:33716963-33717070 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 564-671
Cow position: chr1:46693914-46693808 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 58

Conread position: 564-672
Cow position: chr1:73584660-73584553 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 564-672
Cow position: chr1:81579505-81579612 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 566-671
Cow position: chr1:3757696-3757801 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 566-672
Cow position: chr1:19998291-19998186 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 567-670
Cow position: chr1:23905740-23905843 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 568-660
Cow position: chr1:42360012-42360104 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 569-667
Cow position: chr1:95215439-95215341 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 569-672
Cow position: chr1:39427234-39427132 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 570-672
Cow position: chr1:75744608-75744710 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 578-667
Cow position: chr1:88618348-88618438 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 380-511
Cow position: chr10:31401307-31401173 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 395-506
Cow position: chr10:39110388-39110275 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 402-493
Cow position: chr10:30370583-30370493 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 402-497
Cow position: chr10:17175647-17175742 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr10:41397082-41397177 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr10:52152137-52152232 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-505
Cow position: chr10:61588645-61588542 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-511
Cow position: chr10:10046434-10046323 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 402-672
Cow position: chr10:48259677-48259414 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 96, 0

Conread position: 408-497
Cow position: chr10:52046486-52046575 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 408-527
Cow position: chr10:29360490-29360611 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 410-666
Cow position: chr10:26608338-26608075 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 103, 18

Conread position: 415-671
Cow position: chr10:49038132-49038380 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 178, 104

Conread position: 517-669
Cow position: chr10:65803424-65803270 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 533-660
Cow position: chr10:1976640-1976513 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 29

Conread position: 536-667
Cow position: chr10:41941895-41941766 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 536-671
Cow position: chr10:48369925-48369790 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 542-672
Cow position: chr10:31266638-31266509 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 47

Conread position: 543-671
Cow position: chr10:19094339-19094465 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 545-669
Cow position: chr10:35767386-35767262 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 107
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 547-671
Cow position: chr10:11317725-11317849 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 547-672
Cow position: chr10:6851966-6852091 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 548-663
Cow position: chr10:35753267-35753150 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 550-667
Cow position: chr10:55733902-55733788 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 550-670
Cow position: chr10:24971899-24971782 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 550-671
Cow position: chr10:29165975-29166096 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 5

Conread position: 550-671
Cow position: chr10:34607255-34607376 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 551-660
Cow position: chr10:9287764-9287874 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 552-659
Cow position: chr10:67716683-67716787 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 552-667
Cow position: chr10:33665541-33665654 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 552-667
Cow position: chr10:39774331-39774216 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 552-672
Cow position: chr10:34660516-34660400 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 46

Conread position: 554-655
Cow position: chr10:34655410-34655309 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-655
Cow position: chr10:49045545-49045646 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-656
Cow position: chr10:15462199-15462302 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-659
Cow position: chr10:20095457-20095560 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-659
Cow position: chr10:33163411-33163515 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 554-659
Cow position: chr10:39110294-39110188 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-659
Cow position: chr10:46829576-46829681 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr10:56094930-56095034 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 554-660
Cow position: chr10:77091-77197 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr10:888628-888733 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr10:8475563-8475667 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 554-660
Cow position: chr10:32774816-32774923 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 94
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 554-660
Cow position: chr10:35912045-35911938 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 49

Conread position: 554-660
Cow position: chr10:36001907-36002010 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr10:49846477-49846583 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr10:53674524-53674630 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 96
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr10:56683500-56683393 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 554-660
Cow position: chr10:58234971-58235075 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 554-662
Cow position: chr10:55063410-55063518 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr10:34673599-34673709 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 554-663
Cow position: chr10:40421144-40421035 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr10:51836457-51836348 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr10:51944064-51944172 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position: chr10:61600515-61600407 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 554-664
Cow position: chr10:22321228-22321330 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 554-667
Cow position: chr10:1087721-1087833 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr10:1749278-1749389 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 554-667
Cow position: chr10:6252783-6252670 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr10:6516483-6516372 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 554-667
Cow position: chr10:6543280-6543389 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 554-667
Cow position: chr10:15818095-15817982 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr10:16092917-16093029 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 554-667
Cow position: chr10:20897002-20897117 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 554-667
Cow position: chr10:22528199-22528087 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 554-667
Cow position: chr10:26209560-26209447 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr10:26731948-26731835 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr10:29569034-29568921 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr10:29628252-29628136 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 554-667
Cow position: chr10:30224384-30224497 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr10:31362508-31362397 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 554-667
Cow position: chr10:31401197-31401084 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr10:31527695-31527808 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr10:35905129-35905014 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 554-667
Cow position: chr10:44783042-44783155 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr10:50390484-50390595 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 554-667
Cow position: chr10:56080471-56080360 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 554-667
Cow position: chr10:62316267-62316383 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 554-667
Cow position: chr10:64876219-64876329 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 554-667
Cow position: chr10:64961002-64961115 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr10:66127558-66127672 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 554-668
Cow position: chr10:17175734-17175851 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 554-669
Cow position: chr10:2856792-2856905 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-669
Cow position: chr10:13368052-13368167 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr10:14189110-14188996 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 554-669
Cow position: chr10:15353623-15353508 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr10:16297613-16297498 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr10:34430513-34430399 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-669
Cow position: chr10:41626310-41626424 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 554-669
Cow position: chr10:45769742-45769856 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-669
Cow position: chr10:46195495-46195609 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 48

Conread position: 554-669
Cow position: chr10:56828619-56828505 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-670
Cow position: chr10:30456152-30456039 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 554-671
Cow position: chr10:1719829-1719710 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 7

Conread position: 554-671
Cow position: chr10:2703924-2704043 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr10:5543549-5543431 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 81

Conread position: 554-671
Cow position: chr10:10752279-10752162 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr10:16598390-16598507 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr10:16830726-16830610 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 554-671
Cow position: chr10:20294965-20294848 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr10:24096678-24096561 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 79

Conread position: 554-671
Cow position: chr10:25509400-25509517 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr10:26577251-26577368 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr10:28671122-28671004 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr10:29211659-29211776 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr10:30441341-30441227 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 554-671
Cow position: chr10:31466445-31466562 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr10:31791559-31791441 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr10:34906410-34906527 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr10:35903243-35903127 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 554-671
Cow position: chr10:37818858-37818742 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr10:43451216-43451101 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 554-671
Cow position: chr10:47976589-47976706 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr10:50016291-50016175 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 554-671
Cow position: chr10:52046567-52046679 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr10:56834980-56835097 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr10:57034089-57033971 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 84, 80

Conread position: 554-671
Cow position: chr10:58718353-58718471 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 554-672
Cow position: chr10:1423533-1423655 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 99, 40

Conread position: 554-672
Cow position: chr10:5264402-5264519 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr10:6345773-6345892 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 554-672
Cow position: chr10:6719602-6719721 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 554-672
Cow position: chr10:10046347-10046228 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 554-672
Cow position: chr10:10699809-10699691 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr10:19394879-19394760 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 49

Conread position: 554-672
Cow position: chr10:19678569-19678686 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 554-672
Cow position: chr10:19895101-19895218 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr10:20446801-20446920 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 116, 0

Conread position: 554-672
Cow position: chr10:20735408-20735527 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 81

Conread position: 554-672
Cow position: chr10:21461942-21462057 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 554-672
Cow position: chr10:24547960-24548077 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr10:28721492-28721609 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 554-672
Cow position: chr10:29188659-29188542 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr10:30914198-30914316 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr10:33915350-33915232 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr10:39939728-39939611 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 554-672
Cow position: chr10:41407988-41408106 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr10:47158807-47158926 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr10:52152224-52152342 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr10:52569296-52569411 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 554-672
Cow position: chr10:53973550-53973663 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 554-672
Cow position: chr10:61588558-61588442 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 554-672
Cow position: chr10:65132660-65132778 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr10:69935076-69934958 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 87, 80

Conread position: 555-663
Cow position: chr10:14541719-14541827 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 555-665
Cow position: chr10:37528905-37528793 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 555-667
Cow position: chr10:6489568-6489680 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr10:19503771-19503660 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 555-667
Cow position: chr10:21422452-21422338 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 28

Conread position: 555-667
Cow position: chr10:58066432-58066320 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 555-668
Cow position: chr10:22048952-22049068 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 11

Conread position: 555-669
Cow position: chr10:40106819-40106932 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 555-669
Cow position: chr10:49146235-49146350 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 105, 0

Conread position: 555-671
Cow position: chr10:24732016-24732128 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 555-671
Cow position: chr10:44681219-44681336 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 555-672
Cow position: chr10:15889192-15889305 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 555-672
Cow position: chr10:19402638-19402754 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 555-672
Cow position: chr10:20132825-20132709 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 555-672
Cow position: chr10:56475171-56475288 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr10:69698686-69698802 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 556-654
Cow position: chr10:65424208-65424110 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 556-659
Cow position: chr10:6235720-6235617 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 556-660
Cow position: chr10:24870868-24870972 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 556-663
Cow position: chr10:39123998-39123891 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 94
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 556-667
Cow position: chr10:14817460-14817351 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 556-670
Cow position: chr10:64182154-64182267 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 556-672
Cow position: chr10:22786604-22786719 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 557-670
Cow position: chr10:59675548-59675437 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 557-671
Cow position: chr10:40933381-40933495 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 77

Conread position: 557-672
Cow position: chr10:11487273-11487161 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 557-672
Cow position: chr10:27717134-27717022 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 558-667
Cow position: chr10:28569772-28569881 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 558-667
Cow position: chr10:32503156-32503264 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 558-667
Cow position: chr10:42312617-42312722 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 558-671
Cow position: chr10:11059502-11059614 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 558-671
Cow position: chr10:22616938-22616824 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 559-672
Cow position: chr10:35026032-35026145 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 560-667
Cow position: chr10:69998238-69998134 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 560-672
Cow position: chr10:68183223-68183113 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 561-656
Cow position: chr10:54476820-54476914 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 561-660
Cow position: chr10:58259807-58259708 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 561-663
Cow position: chr10:32834338-32834440 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 561-665
Cow position: chr10:62114406-62114511 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 561-667
Cow position: chr10:1427751-1427854 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 561-667
Cow position: chr10:15292980-15293085 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 561-667
Cow position: chr10:59839577-59839472 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 561-671
Cow position: chr10:23936192-23936301 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 561-671
Cow position: chr10:24744836-24744946 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-671
Cow position: chr10:53083872-53083983 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 561-672
Cow position: chr10:41397188-41397299 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr10:60237405-60237296 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 561-672
Cow position: chr10:65345742-65345632 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 562-659
Cow position: chr10:52296207-52296303 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 562-660
Cow position: chr10:38014082-38014180 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 562-663
Cow position: chr10:37529560-37529459 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-667
Cow position: chr10:8923644-8923749 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 562-672
Cow position: chr10:35026189-35026300 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 564-667
Cow position: chr10:6505072-6505175 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 564-667
Cow position: chr10:13391342-13391239 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 564-669
Cow position: chr10:10720965-10720860 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 564-671
Cow position: chr10:13311443-13311550 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 564-671
Cow position: chr10:54730723-54730829 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 564-672
Cow position: chr10:29360619-29360727 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 564-672
Cow position: chr10:35862519-35862411 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 564-672
Cow position: chr10:59588454-59588348 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 565-660
Cow position: chr10:15872150-15872056 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 565-672
Cow position: chr10:23912784-23912677 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 69

Conread position: 565-672
Cow position: chr10:33891375-33891268 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 566-663
Cow position: chr10:37444503-37444406 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 566-671
Cow position: chr10:37287464-37287359 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 568-672
Cow position: chr10:38725375-38725479 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 570-671
Cow position: chr10:5890053-5889952 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 570-672
Cow position: chr10:42745630-42745732 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 571-672
Cow position: chr10:49568922-49569024 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 573-667
Cow position: chr10:30460365-30460459 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 574-672
Cow position: chr10:39646383-39646285 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 402-495
Cow position: chr11:25336691-25336784 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr11:30165120-30165215 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr11:64029636-64029541 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-501
Cow position: chr11:44031619-44031718 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-511
Cow position: chr11:22103382-22103493 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 402-532
Cow position: chr11:18086718-18086587 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 402-536
Cow position: chr11:10364785-10364652 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 403-497
Cow position: chr11:41239651-41239557 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 403-497
Cow position: chr11:68207227-68207133 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 403-667
Cow position: chr11:8246750-8247007 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 239, 88

Conread position: 406-669
Cow position: chr11:40479300-40479056 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 408-506
Cow position: chr11:48672334-48672432 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 408-531
Cow position: chr11:62979103-62979227 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 95, 104

Conread position: 409-667
Cow position: chr11:10620761-10620506 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 242, 100

Conread position: 514-672
Cow position: chr11:65827067-65826907 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 48

Conread position: 547-655
Cow position: chr11:65495628-65495520 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 91, 86

Conread position: 547-660
Cow position: chr11:30720796-30720910 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 547-660
Cow position: chr11:54334032-54334148 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 547-672
Cow position: chr11:68570972-68570848 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 548-660
Cow position: chr11:17968875-17968763 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 548-660
Cow position: chr11:64334558-64334670 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 549-672
Cow position: chr11:63434842-63434964 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 550-672
Cow position: chr11:7315424-7315302 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 550-672
Cow position: chr11:8339702-8339580 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 552-667
Cow position: chr11:35238533-35238648 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-644
Cow position: chr11:51029058-51029149 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 554-656
Cow position: chr11:15373344-15373446 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-656
Cow position: chr11:53552963-53553060 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-658
Cow position: chr11:17860447-17860343 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr11:47662431-47662536 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr11:1849457-1849353 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 554-660
Cow position: chr11:2911114-2911008 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr11:19787852-19787958 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr11:25319757-25319863 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr11:34962769-34962874 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr11:40818938-40818826 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 554-660
Cow position: chr11:43913929-43914034 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 554-660
Cow position: chr11:53147833-53147728 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr11:65857564-65857670 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr11:78480501-78480610 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 554-663
Cow position: chr11:32595173-32595282 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr11:35684792-35684682 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 554-663
Cow position: chr11:41599021-41598912 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr11:53778319-53778428 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr11:54856341-54856451 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 81, 75

Conread position: 554-666
Cow position: chr11:3769583-3769470 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-666
Cow position: chr11:15285911-15285799 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr11:439952-439838 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 554-667
Cow position: chr11:951975-952088 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr11:2821241-2821353 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 554-667
Cow position: chr11:3780718-3780605 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr11:15503808-15503920 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 554-667
Cow position: chr11:39499083-39499196 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 80

Conread position: 554-667
Cow position: chr11:41239565-41239455 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 554-667
Cow position: chr11:41812205-41812093 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 100
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 554-667
Cow position: chr11:43897842-43897957 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 554-667
Cow position: chr11:48271902-48272014 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 554-667
Cow position: chr11:49873132-49873246 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr11:50153111-50152999 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr11:50197738-50197625 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 79

Conread position: 554-667
Cow position: chr11:52297517-52297404 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr11:55347969-55348082 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr11:55744180-55744293 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr11:62376730-62376618 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr11:62490140-62490253 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr11:64090379-64090267 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 554-667
Cow position: chr11:69075014-69075127 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr11:71705696-71705584 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 554-667
Cow position: chr11:81174597-81174709 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-669
Cow position: chr11:32218293-32218176 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 554-669
Cow position: chr11:44576033-44575915 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 554-669
Cow position: chr11:71868897-71868782 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:866003-866123 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 554-671
Cow position: chr11:1485654-1485537 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:3303543-3303660 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:3719958-3720075 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 79

Conread position: 554-671
Cow position: chr11:3797116-3797233 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:4323073-4323190 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 102
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:4732045-4732162 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:6639218-6639334 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr11:6835234-6835352 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 554-671
Cow position: chr11:10095049-10095167 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 50, 73

Conread position: 554-671
Cow position: chr11:10545696-10545813 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:18588873-18588757 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 554-671
Cow position: chr11:21894447-21894330 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:25791986-25791868 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 554-671
Cow position: chr11:27326191-27326308 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:32749814-32749931 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:33349995-33349878 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:33413940-33414057 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:35363202-35363318 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr11:36986668-36986785 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:37118191-37118308 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 104
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 71

Conread position: 554-671
Cow position: chr11:37278492-37278376 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr11:38638829-38638944 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 554-671
Cow position: chr11:40402126-40402009 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:40467417-40467300 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:43524329-43524444 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 554-671
Cow position: chr11:45277449-45277333 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 40

Conread position: 554-671
Cow position: chr11:46748162-46748043 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr11:50111898-50112014 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 108, 90

Conread position: 554-671
Cow position: chr11:50236262-50236144 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 50, 81

Conread position: 554-671
Cow position: chr11:55117179-55117296 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:56518606-56518489 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:59959272-59959156 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr11:61454828-61454711 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:62979184-62979301 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:63065360-63065477 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:65694130-65694014 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 40

Conread position: 554-671
Cow position: chr11:66733542-66733659 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:67345938-67345819 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 81

Conread position: 554-671
Cow position: chr11:70273010-70273124 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 554-671
Cow position: chr11:70382988-70382872 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 554-671
Cow position: chr11:70484155-70484038 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:71391899-71391786 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 554-671
Cow position: chr11:71846642-71846525 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr11:83357099-83357214 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 84, 71

Conread position: 554-672
Cow position: chr11:1071387-1071267 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 554-672
Cow position: chr11:4384332-4384449 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 554-672
Cow position: chr11:17112920-17112800 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 104
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 111, 0

Conread position: 554-672
Cow position: chr11:20601946-20602064 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr11:27386633-27386515 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr11:27907259-27907377 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr11:27939193-27939311 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr11:31900755-31900872 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 554-672
Cow position: chr11:36182395-36182513 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr11:37068597-37068479 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 20, 57

Conread position: 554-672
Cow position: chr11:40458827-40458945 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr11:40792994-40792869 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 554-672
Cow position: chr11:48659400-48659517 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 27

Conread position: 554-672
Cow position: chr11:53130519-53130636 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr11:58990217-58990335 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 84, 79

Conread position: 554-672
Cow position: chr11:60302251-60302133 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr11:76114359-76114480 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 554-672
Cow position: chr11:77751059-77750943 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 554-672
Cow position: chr11:81066875-81066757 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr11:83196208-83196323 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 555-660
Cow position: chr11:85723409-85723514 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 555-664
Cow position: chr11:19890590-19890699 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 98
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 17, 51

Conread position: 555-667
Cow position: chr11:3704028-3704139 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 555-667
Cow position: chr11:17831519-17831408 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 555-667
Cow position: chr11:28643789-28643898 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 555-667
Cow position: chr11:44031707-44031819 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr11:58588051-58588164 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 555-667
Cow position: chr11:62750042-62749931 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 555-667
Cow position: chr11:74929488-74929599 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 555-667
Cow position: chr11:80820291-80820179 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 83, 79

Conread position: 555-671
Cow position: chr11:1380402-1380516 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 555-671
Cow position: chr11:13190927-13191043 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr11:23232805-23232690 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 555-672
Cow position: chr11:64029548-64029432 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 555-672
Cow position: chr11:65430772-65430886 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 555-672
Cow position: chr11:71168870-71168753 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 556-658
Cow position: chr11:7460874-7460770 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 556-660
Cow position: chr11:34615977-34616081 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 556-665
Cow position: chr11:62151173-62151064 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 556-669
Cow position: chr11:3833639-3833526 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 556-669
Cow position: chr11:25745030-25745141 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 556-669
Cow position: chr11:32254607-32254494 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 78

Conread position: 556-671
Cow position: chr11:70459283-70459397 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 556-671
Cow position: chr11:70838594-70838479 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 557-660
Cow position: chr11:73924849-73924746 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 557-663
Cow position: chr11:42292126-42292020 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 557-667
Cow position: chr11:44637051-44636941 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 82, 77

Conread position: 557-671
Cow position: chr11:61137488-61137372 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 558-664
Cow position: chr11:80923625-80923518 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 558-667
Cow position: chr11:39115206-39115313 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 558-671
Cow position: chr11:8988519-8988405 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 559-667
Cow position: chr11:8827491-8827599 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 559-667
Cow position: chr11:69119011-69119119 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 559-667
Cow position: chr11:70619767-70619874 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 560-671
Cow position: chr11:23251891-23251780 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 45

Conread position: 561-659
Cow position: chr11:2788093-2788191 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 561-660
Cow position: chr11:44642572-44642473 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-667
Cow position: chr11:7924875-7924770 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 561-667
Cow position: chr11:16251536-16251429 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 561-667
Cow position: chr11:30191883-30191989 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 561-669
Cow position: chr11:9837383-9837275 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 13

Conread position: 561-669
Cow position: chr11:20761559-20761666 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 561-669
Cow position: chr11:63166446-63166338 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr11:6091935-6091824 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr11:29947213-29947102 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr11:48932869-48932759 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 561-672
Cow position: chr11:49148763-49148873 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 562-660
Cow position: chr11:33526791-33526888 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 563-671
Cow position: chr11:37347191-37347297 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 564-658
Cow position: chr11:40609004-40608910 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 84
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 564-671
Cow position: chr11:6234162-6234055 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 564-672
Cow position: chr11:9234345-9234452 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 565-656
Cow position: chr11:13061506-13061415 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 565-671
Cow position: chr11:67931777-67931673 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 565-672
Cow position: chr11:4436050-4436157 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 565-672
Cow position: chr11:41983729-41983622 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 566-672
Cow position: chr11:23138342-23138236 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 88, 33

Conread position: 568-671
Cow position: chr11:35276021-35276124 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 570-671
Cow position: chr11:1362758-1362657 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 570-671
Cow position: chr11:39057361-39057462 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 570-671
Cow position: chr11:77207771-77207872 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 570-672
Cow position: chr11:32377910-32378012 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 571-667
Cow position: chr11:33341422-33341327 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 385-495
Cow position: chr12:37094495-37094607 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 387-497
Cow position: chr12:28572290-28572398 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 387-497
Cow position: chr12:33297442-33297553 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 67, 11

Conread position: 392-516
Cow position: chr12:36118558-36118686 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 392-532
Cow position: chr12:6412519-6412375 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 402-494
Cow position: chr12:45160909-45160817 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr12:19198888-19198983 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-505
Cow position: chr12:36501347-36501244 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-529
Cow position: chr12:24206492-24206617 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 403-496
Cow position: chr12:24755423-24755330 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 404-672
Cow position: chr12:30590326-30590581 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 103, 26

Conread position: 460-672
Cow position: chr12:1284854-1284653 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 547-671
Cow position: chr12:21620000-21619876 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 548-671
Cow position: chr12:45160828-45160708 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 548-672
Cow position: chr12:3160745-3160868 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 550-667
Cow position: chr12:38832509-38832392 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 552-672
Cow position: chr12:2242204-2242080 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 553-659
Cow position: chr12:10461692-10461797 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 553-672
Cow position: chr12:19865928-19866047 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-649
Cow position: chr12:45679818-45679913 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-650
Cow position: chr12:19872125-19872221 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr12:34148664-34148560 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 554-659
Cow position: chr12:43192499-43192394 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr12:5134826-5134932 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr12:16359561-16359667 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr12:19869158-19869264 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr12:29119585-29119692 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 81

Conread position: 554-660
Cow position: chr12:35218717-35218612 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position: chr12:4719273-4719382 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 96
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 80

Conread position: 554-663
Cow position: chr12:10895861-10895752 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr12:30745400-30745509 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 95
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr12:15429913-15429800 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr12:18020539-18020653 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 554-667
Cow position: chr12:25561058-25561170 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 554-667
Cow position: chr12:30605469-30605356 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr12:31959580-31959694 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 554-667
Cow position: chr12:38111417-38111529 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 554-667
Cow position: chr12:39486117-39486229 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 101
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr12:44905324-44905440 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 75, 40

Conread position: 554-667
Cow position: chr12:45065521-45065634 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr12:9143079-9143195 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 75

Conread position: 554-669
Cow position: chr12:11583093-11583203 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 16

Conread position: 554-669
Cow position: chr12:17472533-17472418 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr12:23446116-23446230 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-670
Cow position: chr12:45814577-45814462 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr12:3196940-3197055 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 554-671
Cow position: chr12:3372380-3372496 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 554-671
Cow position: chr12:6240994-6241113 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 554-671
Cow position: chr12:8487643-8487526 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr12:9465773-9465657 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 47

Conread position: 554-671
Cow position: chr12:11056563-11056680 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr12:12017561-12017680 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 554-671
Cow position: chr12:12199218-12199104 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 554-671
Cow position: chr12:17079945-17080060 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 554-671
Cow position: chr12:18937074-18937191 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 78

Conread position: 554-671
Cow position: chr12:19508885-19508768 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr12:19691548-19691432 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 52

Conread position: 554-671
Cow position: chr12:20326458-20326574 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 554-671
Cow position: chr12:23909050-23908934 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr12:26782568-26782685 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr12:29484204-29484085 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 554-671
Cow position: chr12:29995775-29995657 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 82

Conread position: 554-671
Cow position: chr12:31060296-31060179 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 79

Conread position: 554-671
Cow position: chr12:36118658-36118774 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr12:40910603-40910486 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 45

Conread position: 554-671
Cow position: chr12:42181454-42181337 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr12:47803842-47803959 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 40

Conread position: 554-672
Cow position: chr12:3600209-3600091 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr12:4342034-4341915 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 554-672
Cow position: chr12:18123374-18123491 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr12:18421239-18421122 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr12:20316819-20316702 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr12:24755337-24755220 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 554-672
Cow position: chr12:26777465-26777348 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr12:28011212-28011094 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr12:28572390-28572507 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 554-672
Cow position: chr12:30437938-30438056 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 40

Conread position: 554-672
Cow position: chr12:34385827-34385708 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 79

Conread position: 554-672
Cow position: chr12:37123200-37123317 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 554-672
Cow position: chr12:42966688-42966805 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 555-656
Cow position: chr12:13018101-13018000 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 79

Conread position: 555-659
Cow position: chr12:39502096-39502200 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 555-663
Cow position: chr12:44014152-44014044 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr12:2286269-2286381 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr12:37481442-37481328 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 555-672
Cow position: chr12:17495504-17495387 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 556-654
Cow position: chr12:35310984-35310886 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 556-660
Cow position: chr12:18577535-18577642 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 47

Conread position: 556-671
Cow position: chr12:21314711-21314826 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position: chr12:26869107-26868995 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 556-671
Cow position: chr12:30728551-30728435 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 556-672
Cow position: chr12:17486448-17486332 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 557-672
Cow position: chr12:46143511-46143626 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 559-667
Cow position: chr12:3076931-3076823 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 560-671
Cow position: chr12:27039073-27038964 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 561-667
Cow position: chr12:3055830-3055937 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 561-671
Cow position: chr12:8943526-8943417 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 32

Conread position: 561-671
Cow position: chr12:14132049-14131940 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 561-672
Cow position: chr12:7108882-7108993 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr12:36954681-36954570 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 562-668
Cow position: chr12:44766778-44766885 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 562-672
Cow position: chr12:6210462-6210352 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-672
Cow position: chr12:21922131-21922240 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 564-671
Cow position: chr12:9229785-9229678 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 565-667
Cow position: chr12:30170365-30170467 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 566-672
Cow position: chr12:4866515-4866619 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 566-672
Cow position: chr12:6411029-6410923 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 567-672
Cow position: chr12:31925350-31925455 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 570-663
Cow position: chr12:5905760-5905853 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 570-671
Cow position: chr12:5714332-5714432 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 570-671
Cow position: chr12:41083769-41083869 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 571-671
Cow position: chr12:41091233-41091333 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 573-671
Cow position: chr12:25529736-25529834 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 583-671
Cow position: chr12:19502704-19502616 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 76
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 381-496
Cow position: chr13:20440234-20440348 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 392-505
Cow position: chr13:18002927-18003041 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 78

Conread position: 401-511
Cow position: chr13:36771074-36771186 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 402-497
Cow position: chr13:3143585-3143490 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-499
Cow position: chr13:7366098-7366195 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-505
Cow position: chr13:1011679-1011576 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 402-505
Cow position: chr13:20605772-20605875 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-536
Cow position: chr13:46324442-46324578 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 82

Conread position: 408-506
Cow position: chr13:33876003-33875905 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 547-663
Cow position: chr13:24754151-24754035 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 547-671
Cow position: chr13:7257668-7257544 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 547-671
Cow position: chr13:17622551-17622428 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 547-672
Cow position: chr13:25927059-25926934 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 548-667
Cow position: chr13:34281946-34281827 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 549-671
Cow position: chr13:12546642-12546763 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 51

Conread position: 550-671
Cow position: chr13:17855638-17855517 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 550-672
Cow position: chr13:33875926-33875804 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 552-663
Cow position: chr13:265407-265295 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 552-672
Cow position: chr13:36264226-36264106 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-658
Cow position: chr13:42085070-42084966 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-658
Cow position: chr13:51528186-51528290 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-658
Cow position: chr13:60967024-60966920 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr13:38485090-38484986 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-659
Cow position: chr13:48629250-48629145 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr13:55295366-55295470 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr13:6969300-6969406 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr13:12480537-12480643 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr13:18835446-18835340 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr13:34035628-34035522 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr13:36352710-36352816 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 48

Conread position: 554-660
Cow position: chr13:46329204-46329313 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 554-660
Cow position: chr13:60429819-60429924 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 554-662
Cow position: chr13:17821000-17821108 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 100, 45

Conread position: 554-662
Cow position: chr13:19882776-19882883 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position: chr13:13089283-13089175 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position: chr13:15172149-15172256 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 554-663
Cow position: chr13:20570986-20570883 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 554-663
Cow position: chr13:25817773-25817664 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr13:60690459-60690571 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 32

Conread position: 554-664
Cow position: chr13:37382071-37381960 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 95
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr13:971638-971751 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr13:15234170-15234059 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 99
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 554-667
Cow position: chr13:15740326-15740216 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 554-667
Cow position: chr13:19023579-19023693 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 554-667
Cow position: chr13:20666128-20666239 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr13:30794081-30793968 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr13:37484010-37484123 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr13:38283724-38283837 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr13:41807035-41806927 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 554-667
Cow position: chr13:43138969-43139078 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 554-667
Cow position: chr13:48378312-48378426 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 554-667
Cow position: chr13:54702450-54702338 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 554-669
Cow position: chr13:10928730-10928845 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr13:18244115-18244001 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 554-669
Cow position: chr13:32826147-32826262 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr13:52057801-52057685 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 114

Conread position: 554-670
Cow position: chr13:6616488-6616604 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-670
Cow position: chr13:9900564-9900446 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 554-670
Cow position: chr13:14544382-14544266 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-670
Cow position: chr13:26382971-26383087 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr13:1011592-1011475 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr13:1042696-1042814 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 554-671
Cow position: chr13:5091401-5091518 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr13:7415778-7415894 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 90

Conread position: 554-671
Cow position: chr13:8362486-8362603 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr13:14927497-14927382 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 554-671
Cow position: chr13:16270195-16270079 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 554-671
Cow position: chr13:16292806-16292689 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr13:19119258-19119142 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 554-671
Cow position: chr13:20814020-20814137 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr13:20816573-20816456 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr13:21708441-21708324 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr13:30651435-30651319 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 554-671
Cow position: chr13:32017263-32017379 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr13:34508136-34508020 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 554-671
Cow position: chr13:51856377-51856495 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 58

Conread position: 554-671
Cow position: chr13:51901872-51901755 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 103
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr13:52284169-52284052 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr13:52637541-52637425 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 554-671
Cow position: chr13:54080544-54080661 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr13:1155448-1155566 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr13:3143498-3143383 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr13:5910456-5910573 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 103
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 83, 45

Conread position: 554-672
Cow position: chr13:12244756-12244874 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr13:13344214-13344098 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 554-672
Cow position: chr13:17613606-17613488 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr13:18166990-18166872 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 104
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 85, 80

Conread position: 554-672
Cow position: chr13:18215689-18215569 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 115

Conread position: 554-672
Cow position: chr13:20563258-20563138 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 554-672
Cow position: chr13:20683863-20683979 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 554-672
Cow position: chr13:21276115-21275997 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr13:21287830-21287948 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr13:21524685-21524571 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 554-672
Cow position: chr13:21988842-21988964 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 554-672
Cow position: chr13:22732119-22732236 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 554-672
Cow position: chr13:23269953-23270071 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr13:25531530-25531646 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 37

Conread position: 554-672
Cow position: chr13:33256756-33256638 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr13:34728577-34728695 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 41

Conread position: 554-672
Cow position: chr13:34941397-34941514 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr13:38277877-38277995 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr13:40652193-40652075 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr13:42114281-42114163 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr13:45353302-45353188 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 554-672
Cow position: chr13:52010326-52010443 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 554-672
Cow position: chr13:57493924-57494041 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr13:58043888-58043771 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr13:60436623-60436741 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr13:61047466-61047348 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 70

Conread position: 554-672
Cow position: chr13:61976705-61976821 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 555-658
Cow position: chr13:14576925-14576826 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 555-660
Cow position: chr13:17994185-17994080 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 94
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 79

Conread position: 555-660
Cow position: chr13:20537842-20537737 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 555-660
Cow position: chr13:31808771-31808666 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-660
Cow position: chr13:47007479-47007582 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 555-663
Cow position: chr13:17291872-17291979 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 555-671
Cow position: chr13:32949744-32949860 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr13:15041213-15041330 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr13:20605860-20605977 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr13:22115964-22115846 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 46

Conread position: 555-672
Cow position: chr13:24155801-24155683 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 46

Conread position: 556-660
Cow position: chr13:27525004-27525107 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 92
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 556-669
Cow position: chr13:25434871-25434984 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 556-670
Cow position: chr13:13306364-13306246 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 556-672
Cow position: chr13:54381677-54381792 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 556-672
Cow position: chr13:60974333-60974219 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 114, 43

Conread position: 557-660
Cow position: chr13:6606763-6606867 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 558-661
Cow position: chr13:28570093-28569986 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 558-672
Cow position: chr13:52894398-52894286 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 560-663
Cow position: chr13:42860316-42860419 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 560-667
Cow position: chr13:8195335-8195229 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 560-667
Cow position: chr13:15288671-15288778 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 65

Conread position: 560-671
Cow position: chr13:24729202-24729092 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 95
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 560-672
Cow position: chr13:4553053-4552945 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 560-672
Cow position: chr13:37516882-37516994 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 561-659
Cow position: chr13:33517671-33517769 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 561-660
Cow position: chr13:33352114-33352213 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-667
Cow position: chr13:20820588-20820693 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 561-672
Cow position: chr13:26261541-26261652 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 562-671
Cow position: chr13:3315421-3315531 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 562-671
Cow position: chr13:16015059-16014950 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 562-671
Cow position: chr13:25261553-25261665 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 562-672
Cow position: chr13:19178528-19178418 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-672
Cow position: chr13:23166845-23166954 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 564-667
Cow position: chr13:35660003-35659900 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 564-667
Cow position: chr13:42200868-42200766 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 564-672
Cow position: chr13:16155468-16155575 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 565-660
Cow position: chr13:12614509-12614414 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 565-672
Cow position: chr13:38012610-38012503 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 566-671
Cow position: chr13:57227956-57227851 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 567-672
Cow position: chr13:60599695-60599800 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 568-667
Cow position: chr13:44323149-44323049 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 570-667
Cow position: chr13:9587340-9587436 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 571-672
Cow position: chr13:24376733-24376632 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 582-669
Cow position: chr13:54093972-54093885 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 381-671
Cow position: chr14:36289341-36289610 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 281, 12

Conread position: 385-667
Cow position: chr14:23682741-23682469 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 135, 7

Conread position: 387-495
Cow position: chr14:47507523-47507416 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 402-494
Cow position: chr14:37883512-37883604 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-496
Cow position: chr14:6599548-6599641 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 402-536
Cow position: chr14:16237102-16237234 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 403-495
Cow position: chr14:38295888-38295980 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 410-670
Cow position: chr14:30662444-30662189 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 155, 102

Conread position: 419-672
Cow position: chr14:24237272-24237024 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 88, 181

Conread position: 538-667
Cow position: chr14:35607120-35607249 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 547-667
Cow position: chr14:49543928-49543811 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 64

Conread position: 547-669
Cow position: chr14:8848573-8848451 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 548-672
Cow position: chr14:6490378-6490504 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 549-672
Cow position: chr14:25403621-25403744 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 552-671
Cow position: chr14:21201510-21201631 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 552-672
Cow position: chr14:46489936-46490055 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 554-656
Cow position: chr14:9029365-9029469 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-656
Cow position: chr14:21538164-21538265 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-656
Cow position: chr14:36167253-36167149 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 554-658
Cow position: chr14:3878773-3878666 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 554-659
Cow position: chr14:6599634-6599741 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 554-659
Cow position: chr14:22381237-22381342 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr14:34082838-34082942 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 554-660
Cow position: chr14:8754642-8754538 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 554-660
Cow position: chr14:18940986-18941092 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr14:24992130-24992025 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 554-660
Cow position: chr14:36775918-36775812 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr14:37151322-37151429 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 554-660
Cow position: chr14:37236795-37236689 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr14:47584331-47584437 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-661
Cow position: chr14:39774735-39774844 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 554-662
Cow position: chr14:31130071-31130179 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr14:22989352-22989243 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr14:27848518-27848409 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr14:35381906-35381797 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr14:38811673-38811566 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 554-664
Cow position: chr14:14621868-14621976 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 554-664
Cow position: chr14:31734535-31734646 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 554-667
Cow position: chr14:8495471-8495359 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 554-667
Cow position: chr14:15054670-15054781 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 554-667
Cow position: chr14:18345413-18345525 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 554-667
Cow position: chr14:19189355-19189244 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 16

Conread position: 554-667
Cow position: chr14:19207182-19207069 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr14:20666707-20666816 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr14:21284947-21284835 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 554-667
Cow position: chr14:23080204-23080314 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 554-667
Cow position: chr14:28324955-28324843 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 37

Conread position: 554-667
Cow position: chr14:35544197-35544310 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr14:39779071-39778958 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr14:40230319-40230432 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr14:41179813-41179699 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 554-667
Cow position: chr14:42330672-42330559 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr14:44237382-44237495 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr14:48427394-48427281 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr14:7270698-7270813 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr14:18904290-18904405 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 78

Conread position: 554-671
Cow position: chr14:5501834-5501951 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr14:7317154-7317037 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 104
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr14:8989276-8989394 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr14:13385691-13385574 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr14:13634387-13634505 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 554-671
Cow position: chr14:16237189-16237305 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 37

Conread position: 554-671
Cow position: chr14:18484923-18485040 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr14:18811801-18811918 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr14:19222197-19222083 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 554-671
Cow position: chr14:20712364-20712483 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 80

Conread position: 554-671
Cow position: chr14:21534726-21534839 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 554-671
Cow position: chr14:25682263-25682146 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr14:28304470-28304585 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 98, 18

Conread position: 554-671
Cow position: chr14:28795994-28795877 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr14:36437166-36437285 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 554-671
Cow position: chr14:41809334-41809450 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 554-671
Cow position: chr14:42596695-42596581 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 554-671
Cow position: chr14:43249902-43249786 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 554-671
Cow position: chr14:43452862-43452979 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr14:44382882-44382998 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 59

Conread position: 554-671
Cow position: chr14:45300502-45300619 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr14:47507422-47507305 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr14:48492467-48492583 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 554-672
Cow position: chr14:106257-106375 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 103
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr14:9901492-9901370 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 554-672
Cow position: chr14:10697208-10697326 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr14:11641258-11641374 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 554-672
Cow position: chr14:17755877-17755758 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr14:29300047-29300165 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr14:33538611-33538726 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 29

Conread position: 554-672
Cow position: chr14:33828465-33828351 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 554-672
Cow position: chr14:34096278-34096395 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 554-672
Cow position: chr14:39618059-39618176 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 554-672
Cow position: chr14:41479341-41479461 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 554-672
Cow position: chr14:41756576-41756459 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 554-672
Cow position: chr14:45068770-45068887 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 554-672
Cow position: chr14:45605407-45605290 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 554-672
Cow position: chr14:46965878-46965758 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 47

Conread position: 555-660
Cow position: chr14:33834414-33834306 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 555-668
Cow position: chr14:34199525-34199638 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 13

Conread position: 555-671
Cow position: chr14:7558115-7558230 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 555-671
Cow position: chr14:11507926-11508042 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr14:13723282-13723398 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr14:11981970-11981853 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr14:33326078-33326193 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 555-672
Cow position: chr14:37156185-37156068 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 556-667
Cow position: chr14:20640305-20640419 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 556-671
Cow position: chr14:16342125-16342239 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 556-671
Cow position: chr14:17238679-17238563 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 556-671
Cow position: chr14:22967067-22966953 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 100
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 556-671
Cow position: chr14:39519011-39518897 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 556-671
Cow position: chr14:40284218-40284103 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 556-672
Cow position: chr14:12249881-12249997 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 82, 38

Conread position: 557-671
Cow position: chr14:4109159-4109272 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 9

Conread position: 558-671
Cow position: chr14:24894074-24893961 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 559-666
Cow position: chr14:18308997-18309104 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 36

Conread position: 560-663
Cow position: chr14:33247126-33247229 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 560-672
Cow position: chr14:19513069-19513177 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 561-661
Cow position: chr14:11748611-11748709 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 561-667
Cow position: chr14:41211168-41211061 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 561-669
Cow position: chr14:16834641-16834533 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 561-669
Cow position: chr14:33751822-33751714 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 561-671
Cow position: chr14:25779405-25779295 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr14:19996629-19996518 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr14:35650895-35651006 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 56

Conread position: 562-671
Cow position: chr14:41128200-41128094 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 562-672
Cow position: chr14:14187643-14187533 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 564-664
Cow position: chr14:33714380-33714481 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 564-667
Cow position: chr14:19633490-19633387 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 564-667
Cow position: chr14:33791497-33791394 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 564-669
Cow position: chr14:45677531-45677427 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 564-672
Cow position: chr14:19593832-19593940 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 565-667
Cow position: chr14:14317173-14317070 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 565-672
Cow position: chr14:15795503-15795610 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 567-671
Cow position: chr14:27865827-27865931 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 567-671
Cow position: chr14:46735617-46735513 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 568-672
Cow position: chr14:21357856-21357752 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 570-667
Cow position: chr14:24581225-24581129 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 570-672
Cow position: chr14:33209057-33209159 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 573-671
Cow position: chr14:38295977-38296075 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 574-672
Cow position: chr14:11819826-11819924 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 574-672
Cow position: chr14:19624388-19624290 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 400-506
Cow position: chr15:32979581-32979689 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 402-497
Cow position: chr15:20472095-20472190 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr15:39406411-39406316 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-533
Cow position: chr15:1301591-1301459 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 99
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 110, 0

Conread position: 403-497
Cow position: chr15:36643443-36643537 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 408-505
Cow position: chr15:38395067-38394970 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 547-667
Cow position: chr15:2993962-2993844 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 547-667
Cow position: chr15:10607682-10607802 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 547-667
Cow position: chr15:52611684-52611564 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 547-672
Cow position: chr15:49738676-49738801 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 550-660
Cow position: chr15:5692079-5691970 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 53

Conread position: 550-670
Cow position: chr15:36621786-36621666 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-632
Cow position: chr15:13077125-13077203 (view UCSC Genome Browser custom track)
Alignm length: 79
Alignm identity: 72
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-655
Cow position: chr15:24941022-24941123 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-655
Cow position: chr15:29340427-29340325 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 554-656
Cow position: chr15:18605748-18605647 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 554-658
Cow position: chr15:3874076-3873972 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr15:237092-236988 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 79

Conread position: 554-660
Cow position: chr15:5658526-5658421 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 554-660
Cow position: chr15:5728002-5727896 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr15:13669540-13669645 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 94
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 554-660
Cow position: chr15:16307780-16307674 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr15:20458936-20459042 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 80

Conread position: 554-660
Cow position: chr15:20534086-20534192 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 74, 21

Conread position: 554-660
Cow position: chr15:26079006-26079112 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 96

Conread position: 554-660
Cow position: chr15:51831228-51831335 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 554-660
Cow position: chr15:53019761-53019655 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 54

Conread position: 554-663
Cow position: chr15:5234641-5234749 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position: chr15:9267699-9267808 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 46

Conread position: 554-663
Cow position: chr15:23567760-23567870 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 19, 48

Conread position: 554-663
Cow position: chr15:33314083-33314188 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 554-665
Cow position: chr15:44256841-44256729 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 100, 0

Conread position: 554-667
Cow position: chr15:143867-143980 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr15:5498665-5498778 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr15:5930941-5930827 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 554-667
Cow position: chr15:10442227-10442342 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 104

Conread position: 554-667
Cow position: chr15:14505791-14505680 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 91

Conread position: 554-667
Cow position: chr15:17196509-17196396 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr15:18720678-18720565 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 85, 80

Conread position: 554-667
Cow position: chr15:21388803-21388914 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 99
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 83, 40

Conread position: 554-667
Cow position: chr15:22532605-22532492 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr15:24129011-24128900 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 554-667
Cow position: chr15:31283732-31283619 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 79

Conread position: 554-667
Cow position: chr15:42528978-42528866 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 45

Conread position: 554-667
Cow position: chr15:42536362-42536250 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 45

Conread position: 554-669
Cow position: chr15:363382-363268 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 554-669
Cow position: chr15:11362814-11362933 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 15, 0

Conread position: 554-669
Cow position: chr15:16616558-16616443 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr15:20370103-20370214 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 554-669
Cow position: chr15:33306470-33306357 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 554-669
Cow position: chr15:33976329-33976444 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-670
Cow position: chr15:794651-794765 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 554-670
Cow position: chr15:52380654-52380539 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr15:1857960-1858077 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 59

Conread position: 554-671
Cow position: chr15:7191898-7192014 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-671
Cow position: chr15:10450541-10450655 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 31

Conread position: 554-671
Cow position: chr15:16112766-16112652 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 554-671
Cow position: chr15:16543100-16543217 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr15:16640147-16640031 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr15:20472182-20472298 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 554-671
Cow position: chr15:21832060-21832177 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr15:23798155-23798273 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 554-671
Cow position: chr15:25584725-25584842 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr15:28924405-28924519 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr15:32979670-32979787 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 80

Conread position: 554-671
Cow position: chr15:33662858-33662741 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr15:40423285-40423402 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr15:52454809-52454692 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr15:2620028-2619910 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr15:6082279-6082396 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 554-672
Cow position: chr15:8962364-8962246 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr15:13554704-13554587 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 554-672
Cow position: chr15:16449068-16448950 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 116, 72

Conread position: 554-672
Cow position: chr15:16583348-16583465 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr15:28039116-28039002 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 554-672
Cow position: chr15:28126685-28126803 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr15:37238236-37238120 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 554-672
Cow position: chr15:37716559-37716675 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 554-672
Cow position: chr15:53183215-53183333 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr15:12199663-12199775 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr15:34104629-34104517 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr15:6905904-6905788 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 53, 6

Conread position: 555-671
Cow position: chr15:20328821-20328706 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 44, 0

Conread position: 555-672
Cow position: chr15:22751814-22751697 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 79

Conread position: 555-672
Cow position: chr15:24797451-24797566 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 556-642
Cow position: chr15:52148580-52148494 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 556-656
Cow position: chr15:38846459-38846358 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 556-661
Cow position: chr15:10230905-10231009 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 97

Conread position: 556-667
Cow position: chr15:51427460-51427572 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 556-671
Cow position: chr15:27123188-27123303 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 82, 78

Conread position: 556-671
Cow position: chr15:45479369-45479254 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 556-672
Cow position: chr15:5571274-5571390 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 557-658
Cow position: chr15:6321239-6321340 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 77

Conread position: 557-663
Cow position: chr15:53680409-53680513 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 15, 0

Conread position: 557-668
Cow position: chr15:4093564-4093674 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 558-660
Cow position: chr15:26911721-26911821 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 558-667
Cow position: chr15:23703133-23703024 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 560-671
Cow position: chr15:241206-241094 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 560-671
Cow position: chr15:21365842-21365950 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 560-672
Cow position: chr15:12836962-12837073 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 560-672
Cow position: chr15:47274731-47274619 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 73

Conread position: 561-667
Cow position: chr15:14871104-14870997 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 561-667
Cow position: chr15:25208407-25208514 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 561-667
Cow position: chr15:30800239-30800130 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 561-667
Cow position: chr15:47042278-47042386 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 561-670
Cow position: chr15:18206154-18206264 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 561-671
Cow position: chr15:6657462-6657354 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 77, 33

Conread position: 561-672
Cow position: chr15:1298093-1297983 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 562-655
Cow position: chr15:40957935-40957842 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-660
Cow position: chr15:23767909-23768007 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-669
Cow position: chr15:17100360-17100465 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 562-669
Cow position: chr15:20486861-20486968 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 562-670
Cow position: chr15:32287402-32287509 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 94, 0

Conread position: 562-672
Cow position: chr15:4535263-4535153 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 562-672
Cow position: chr15:9062238-9062348 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-672
Cow position: chr15:45323139-45323030 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 564-660
Cow position: chr15:12316278-12316182 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 70

Conread position: 564-671
Cow position: chr15:12785790-12785683 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 564-671
Cow position: chr15:13846221-13846330 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 566-671
Cow position: chr15:21894134-21894029 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 68

Conread position: 567-663
Cow position: chr15:7430332-7430236 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 569-669
Cow position: chr15:5683483-5683383 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 570-667
Cow position: chr15:11658217-11658314 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 570-672
Cow position: chr15:6462154-6462256 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 571-671
Cow position: chr15:39406081-39405982 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 384-497
Cow position: chr16:40305552-40305664 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 393-536
Cow position: chr16:48087243-48087095 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 402-497
Cow position: chr16:5654154-5654249 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr16:42073322-42073227 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr16:42970293-42970198 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 402-499
Cow position: chr16:45731734-45731637 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-511
Cow position: chr16:30289954-30290065 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 402-672
Cow position: chr16:15320908-15320627 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 101, 60

Conread position: 403-497
Cow position: chr16:46752640-46752546 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 403-497
Cow position: chr16:52889903-52889810 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 408-497
Cow position: chr16:3820808-3820897 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 536-672
Cow position: chr16:8367116-8366981 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 19

Conread position: 547-663
Cow position: chr16:33777537-33777652 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 547-667
Cow position: chr16:13989704-13989821 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 547-667
Cow position: chr16:31978470-31978350 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 547-671
Cow position: chr16:47662430-47662555 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 547-672
Cow position: chr16:30027586-30027711 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 548-656
Cow position: chr16:30311390-30311282 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 548-672
Cow position: chr16:14360826-14360947 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 549-667
Cow position: chr16:35937056-35937174 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 552-672
Cow position: chr16:9932879-9933002 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 114

Conread position: 554-645
Cow position: chr16:29766069-29766159 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 81
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-652
Cow position: chr16:51869363-51869461 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-654
Cow position: chr16:8448937-8448837 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-654
Cow position: chr16:16096464-16096562 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 554-656
Cow position: chr16:3333150-3333252 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 47

Conread position: 554-656
Cow position: chr16:8807365-8807263 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-656
Cow position: chr16:56150038-56150136 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 554-658
Cow position: chr16:49141833-49141729 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr16:7504825-7504929 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-659
Cow position: chr16:42079114-42079012 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 554-660
Cow position: chr16:15370405-15370510 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 554-660
Cow position: chr16:19003795-19003689 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 57

Conread position: 554-660
Cow position: chr16:31122525-31122419 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr16:38903709-38903606 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 554-660
Cow position: chr16:42073235-42073129 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-662
Cow position: chr16:15255226-15255117 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 554-663
Cow position: chr16:29655050-29655159 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 63

Conread position: 554-663
Cow position: chr16:41037409-41037518 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-664
Cow position: chr16:25965231-25965341 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 80

Conread position: 554-664
Cow position: chr16:39616469-39616579 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 107, 45

Conread position: 554-667
Cow position: chr16:4712626-4712739 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr16:7083008-7082895 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 80

Conread position: 554-667
Cow position: chr16:9973777-9973664 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr16:13579118-13579005 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr16:15762438-15762325 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr16:15960569-15960457 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr16:16424879-16424766 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr16:17400107-17400220 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr16:18678922-18679035 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr16:23730211-23730101 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr16:24128426-24128539 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr16:24147880-24147992 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr16:24825792-24825908 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr16:30663146-30663030 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 554-667
Cow position: chr16:33198739-33198626 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr16:33507788-33507901 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr16:36121540-36121429 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 554-667
Cow position: chr16:39385126-39385239 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr16:39394302-39394414 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr16:45731647-45731537 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 554-667
Cow position: chr16:49217840-49217727 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr16:51598877-51598765 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr16:52789787-52789899 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 554-669
Cow position: chr16:15408147-15408033 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 554-669
Cow position: chr16:28191792-28191907 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 80

Conread position: 554-669
Cow position: chr16:34998879-34998760 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 554-669
Cow position: chr16:42339929-42340045 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 7

Conread position: 554-669
Cow position: chr16:49126458-49126343 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 104
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 108, 45

Conread position: 554-669
Cow position: chr16:50516172-50516057 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-670
Cow position: chr16:41896069-41896185 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-670
Cow position: chr16:45173825-45173709 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr16:600670-600787 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr16:4972300-4972183 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 102
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr16:11425415-11425298 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr16:17665360-17665475 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 554-671
Cow position: chr16:18496443-18496326 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr16:22340814-22340927 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 84, 47

Conread position: 554-671
Cow position: chr16:23483013-23483130 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr16:23871927-23871809 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 47

Conread position: 554-671
Cow position: chr16:29158857-29158970 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr16:33299118-33299231 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 554-671
Cow position: chr16:34210688-34210571 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr16:38663986-38663870 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 554-671
Cow position: chr16:42970206-42970089 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr16:51578694-51578578 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr16:55683018-55683135 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr16:8706826-8706707 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 554-672
Cow position: chr16:8796504-8796384 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr16:11100070-11099954 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 554-672
Cow position: chr16:11775326-11775207 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr16:14722017-14721900 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr16:18036691-18036809 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr16:24228625-24228507 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr16:29379979-29380097 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr16:30290041-30290160 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 554-672
Cow position: chr16:30939459-30939576 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr16:34168320-34168438 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr16:35343750-35343633 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 554-672
Cow position: chr16:39279353-39279235 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 80

Conread position: 554-672
Cow position: chr16:43275747-43275865 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr16:47852893-47852777 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 554-672
Cow position: chr16:51400023-51399903 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 555-667
Cow position: chr16:29066894-29067006 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 97
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr16:30715218-30715330 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-669
Cow position: chr16:7498795-7498908 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 555-669
Cow position: chr16:47820297-47820412 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 106, 0

Conread position: 555-672
Cow position: chr16:819977-820094 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr16:32132255-32132368 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 556-660
Cow position: chr16:3288760-3288862 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 556-660
Cow position: chr16:16177543-16177649 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 556-660
Cow position: chr16:18141602-18141499 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 556-667
Cow position: chr16:5292699-5292809 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 556-667
Cow position: chr16:5293390-5293500 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 556-671
Cow position: chr16:13698235-13698350 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position: chr16:56846171-56846055 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 556-672
Cow position: chr16:5416025-5415911 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 556-672
Cow position: chr16:33226805-33226689 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 557-671
Cow position: chr16:8840620-8840734 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 557-671
Cow position: chr16:21450576-21450689 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 558-663
Cow position: chr16:53769919-53769814 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 558-667
Cow position: chr16:3918258-3918366 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 77

Conread position: 558-667
Cow position: chr16:45609715-45609825 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 76

Conread position: 558-669
Cow position: chr16:47510239-47510128 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 558-671
Cow position: chr16:41654015-41654132 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 558-672
Cow position: chr16:35187983-35188097 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 42

Conread position: 558-672
Cow position: chr16:50417959-50417844 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 560-667
Cow position: chr16:48494825-48494718 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 560-669
Cow position: chr16:11619485-11619594 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 560-671
Cow position: chr16:13611714-13611608 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 561-669
Cow position: chr16:590177-590069 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 561-669
Cow position: chr16:52889678-52889570 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 78, 73

Conread position: 561-671
Cow position: chr16:24403462-24403572 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr16:43804230-43804340 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 562-654
Cow position: chr16:42092643-42092551 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 562-659
Cow position: chr16:18205704-18205801 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-660
Cow position: chr16:37116807-37116905 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 562-660
Cow position: chr16:50934400-50934302 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 562-663
Cow position: chr16:38709093-38708993 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 562-667
Cow position: chr16:4910798-4910693 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 72

Conread position: 562-669
Cow position: chr16:53086591-53086485 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 562-671
Cow position: chr16:16402594-16402485 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 562-671
Cow position: chr16:53613032-53613140 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 562-672
Cow position: chr16:33406024-33405914 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 562-672
Cow position: chr16:46434383-46434276 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 564-663
Cow position: chr16:902152-902053 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 564-664
Cow position: chr16:49169647-49169548 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 564-668
Cow position: chr16:51043368-51043472 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 564-671
Cow position: chr16:13791247-13791355 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 564-671
Cow position: chr16:17745569-17745677 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 565-672
Cow position: chr16:14754586-14754479 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 569-660
Cow position: chr16:7429118-7429208 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 574-669
Cow position: chr16:22052191-22052286 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 575-669
Cow position: chr16:23472496-23472591 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 60

Conread position: 578-671
Cow position: chr16:9728953-9729046 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 400-511
Cow position: chr17:22790775-22790888 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 402-495
Cow position: chr17:26182901-26182994 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-496
Cow position: chr17:6155720-6155814 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-505
Cow position: chr17:27679565-27679462 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 409-497
Cow position: chr17:20022831-20022743 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 76
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 418-672
Cow position: chr17:12054352-12054603 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 81, 10

Conread position: 547-667
Cow position: chr17:8644796-8644915 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 547-667
Cow position: chr17:15376083-15376202 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 8

Conread position: 547-667
Cow position: chr17:27667435-27667315 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 548-672
Cow position: chr17:11912940-11912816 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 549-660
Cow position: chr17:5730685-5730796 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 51

Conread position: 549-667
Cow position: chr17:40421430-40421547 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 550-660
Cow position: chr17:43717546-43717441 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 41

Conread position: 551-667
Cow position: chr17:15300107-15299991 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 552-667
Cow position: chr17:3498900-3498784 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 552-667
Cow position: chr17:27142518-27142635 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 552-668
Cow position: chr17:8079081-8079194 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 552-671
Cow position: chr17:3258262-3258378 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 552-672
Cow position: chr17:38832806-38832926 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 105
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 86, 82

Conread position: 554-656
Cow position: chr17:15664435-15664537 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-658
Cow position: chr17:4612313-4612207 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 554-658
Cow position: chr17:14050426-14050324 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 554-659
Cow position: chr17:1295805-1295700 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr17:11102028-11101923 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr17:23063477-23063583 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 554-659
Cow position: chr17:26818686-26818582 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr17:5280876-5280771 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 83, 69

Conread position: 554-660
Cow position: chr17:5898758-5898653 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr17:17059206-17059311 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr17:18860952-18860847 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 7

Conread position: 554-660
Cow position: chr17:20022751-20022645 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr17:20083746-20083640 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr17:27795414-27795519 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 554-660
Cow position: chr17:30539483-30539375 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 554-660
Cow position: chr17:33288888-33288782 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr17:38614722-38614828 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr17:40802578-40802684 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-662
Cow position: chr17:6155807-6155915 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr17:17267166-17267056 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 554-663
Cow position: chr17:20858274-20858165 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-664
Cow position: chr17:6936898-6936787 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-666
Cow position: chr17:9117409-9117521 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 80

Conread position: 554-666
Cow position: chr17:13409588-13409477 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 554-666
Cow position: chr17:21293279-21293166 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 554-666
Cow position: chr17:22135262-22135373 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 554-666
Cow position: chr17:40406070-40406182 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr17:1061296-1061184 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 554-667
Cow position: chr17:2730032-2729918 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 554-667
Cow position: chr17:12216313-12216198 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 554-667
Cow position: chr17:21335932-21335819 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr17:21495143-21495253 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 554-667
Cow position: chr17:23101444-23101332 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 5

Conread position: 554-667
Cow position: chr17:25168079-25168189 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr17:25796574-25796461 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr17:27679478-27679365 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr17:42347455-42347342 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-668
Cow position: chr17:5224169-5224280 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 554-668
Cow position: chr17:31481276-31481165 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 50, 31

Conread position: 554-669
Cow position: chr17:1026045-1026160 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr17:3387060-3387167 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 554-669
Cow position: chr17:6566239-6566352 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 554-669
Cow position: chr17:14848756-14848642 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 554-669
Cow position: chr17:20129444-20129558 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 554-669
Cow position: chr17:20848297-20848411 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 40

Conread position: 554-670
Cow position: chr17:11171562-11171677 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-670
Cow position: chr17:38829849-38829966 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 554-671
Cow position: chr17:1493390-1493273 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 75

Conread position: 554-671
Cow position: chr17:1783840-1783726 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 554-671
Cow position: chr17:3154006-3153889 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr17:6997856-6997971 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 554-671
Cow position: chr17:10528975-10528858 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr17:11296403-11296518 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 554-671
Cow position: chr17:11381949-11381836 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 17

Conread position: 554-671
Cow position: chr17:11618346-11618463 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr17:11664822-11664709 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr17:16117663-16117545 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 103
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 554-671
Cow position: chr17:17951009-17951126 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 80

Conread position: 554-671
Cow position: chr17:20780276-20780393 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 52

Conread position: 554-671
Cow position: chr17:21039044-21039158 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 554-671
Cow position: chr17:21874550-21874434 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 554-671
Cow position: chr17:24553770-24553887 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr17:32027696-32027579 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr17:37163763-37163644 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 554-671
Cow position: chr17:40771594-40771714 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 554-672
Cow position: chr17:2275040-2275159 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr17:5740329-5740445 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 554-672
Cow position: chr17:5896146-5896026 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 19, 47

Conread position: 554-672
Cow position: chr17:9565075-9565193 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr17:11386282-11386398 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 83, 46

Conread position: 554-672
Cow position: chr17:18592205-18592324 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr17:18720682-18720563 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 554-672
Cow position: chr17:20839792-20839677 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 554-672
Cow position: chr17:20874087-20874202 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-672
Cow position: chr17:21973365-21973249 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 554-672
Cow position: chr17:22057407-22057289 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 88, 79

Conread position: 554-672
Cow position: chr17:23337248-23337129 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 554-672
Cow position: chr17:23517401-23517284 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr17:26182988-26183106 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr17:29292603-29292483 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 554-672
Cow position: chr17:30718653-30718535 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr17:34079332-34079214 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 84, 80

Conread position: 554-672
Cow position: chr17:41029718-41029837 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 555-663
Cow position: chr17:20090854-20090746 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr17:32419352-32419239 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 555-671
Cow position: chr17:21004064-21003948 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr17:24973717-24973834 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 556-656
Cow position: chr17:20993272-20993171 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 556-656
Cow position: chr17:25815376-25815477 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 556-671
Cow position: chr17:21807037-21806919 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 556-671
Cow position: chr17:25344172-25344057 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position: chr17:30665042-30665155 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 556-672
Cow position: chr17:27162419-27162536 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 557-660
Cow position: chr17:3306637-3306739 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 557-660
Cow position: chr17:27770188-27770085 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 557-669
Cow position: chr17:26764783-26764894 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 557-669
Cow position: chr17:36331197-36331086 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 558-671
Cow position: chr17:14033877-14033761 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 558-672
Cow position: chr17:1568406-1568292 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 50

Conread position: 560-667
Cow position: chr17:21017566-21017673 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 560-669
Cow position: chr17:36533433-36533542 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 560-671
Cow position: chr17:32651388-32651499 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 74

Conread position: 561-667
Cow position: chr17:15103115-15103009 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-671
Cow position: chr17:5423298-5423190 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 561-671
Cow position: chr17:16371025-16371134 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 561-671
Cow position: chr17:34316935-34316826 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 562-660
Cow position: chr17:5745469-5745371 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-667
Cow position: chr17:23680758-23680863 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-672
Cow position: chr17:9778025-9778136 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 563-672
Cow position: chr17:27305936-27306042 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 564-660
Cow position: chr17:7041169-7041073 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 564-667
Cow position: chr17:1410465-1410364 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 564-671
Cow position: chr17:30999552-30999658 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 564-672
Cow position: chr17:7760687-7760578 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 565-671
Cow position: chr17:13922250-13922358 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 567-671
Cow position: chr17:26230719-26230822 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 568-660
Cow position: chr17:5733668-5733576 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 569-672
Cow position: chr17:11281326-11281223 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 68

Conread position: 570-663
Cow position: chr17:32977192-32977100 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 570-671
Cow position: chr17:21739102-21739001 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 571-667
Cow position: chr17:17405921-17406017 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 571-671
Cow position: chr17:11156710-11156610 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 575-671
Cow position: chr17:18884560-18884464 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 64, 25

Conread position: 578-672
Cow position: chr17:966949-966855 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 387-496
Cow position: chr18:36224374-36224481 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 402-497
Cow position: chr18:5190073-5189978 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-501
Cow position: chr18:28767973-28768072 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-505
Cow position: chr18:23658953-23658850 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-516
Cow position: chr18:7486858-7486973 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 403-505
Cow position: chr18:34755317-34755215 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 403-671
Cow position: chr18:11166514-11166789 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 93, 164

Conread position: 409-530
Cow position: chr18:51211779-51211901 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 547-667
Cow position: chr18:4556699-4556578 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 548-669
Cow position: chr18:16045313-16045192 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 548-672
Cow position: chr18:3180106-3180231 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 548-672
Cow position: chr18:29958459-29958336 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 551-671
Cow position: chr18:26586975-26586854 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 84

Conread position: 552-655
Cow position: chr18:52635390-52635289 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 552-671
Cow position: chr18:2270812-2270694 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 552-671
Cow position: chr18:26286604-26286722 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 48

Conread position: 552-672
Cow position: chr18:25003186-25003065 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 554-654
Cow position: chr18:3133049-3132952 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 554-655
Cow position: chr18:12585447-12585347 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 554-655
Cow position: chr18:30360427-30360326 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-658
Cow position: chr18:12118152-12118047 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 554-659
Cow position: chr18:44802190-44802086 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 46

Conread position: 554-660
Cow position: chr18:7359427-7359533 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 80

Conread position: 554-660
Cow position: chr18:9007842-9007947 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 554-660
Cow position: chr18:12776080-12775974 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr18:23658866-23658759 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 554-660
Cow position: chr18:27078541-27078647 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 89

Conread position: 554-660
Cow position: chr18:28101319-28101425 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr18:49660347-49660240 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 554-660
Cow position: chr18:55589782-55589676 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr18:56172327-56172221 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr18:4182497-4182390 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-663
Cow position: chr18:8105250-8105142 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 71

Conread position: 554-663
Cow position: chr18:44549214-44549105 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr18:51679180-51679071 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 80

Conread position: 554-664
Cow position: chr18:9010425-9010534 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 554-667
Cow position: chr18:4535291-4535179 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr18:6290477-6290589 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 554-667
Cow position: chr18:11831831-11831944 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr18:13293203-13293315 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr18:16378664-16378777 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr18:17004943-17005056 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr18:19619640-19619754 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 554-667
Cow position: chr18:22790380-22790269 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 554-667
Cow position: chr18:24834902-24834786 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 554-667
Cow position: chr18:26938678-26938787 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 554-667
Cow position: chr18:39709583-39709696 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr18:45570714-45570827 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr18:50637770-50637657 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-668
Cow position: chr18:9974632-9974519 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 47

Conread position: 554-669
Cow position: chr18:18958098-18957983 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr18:19159271-19159159 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-669
Cow position: chr18:19645868-19645982 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 554-669
Cow position: chr18:24342318-24342434 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 554-669
Cow position: chr18:35012613-35012498 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr18:41270780-41270898 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 23, 31

Conread position: 554-669
Cow position: chr18:46135013-46135127 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 554-670
Cow position: chr18:10656139-10656254 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr18:238651-238536 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 554-671
Cow position: chr18:2099660-2099543 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr18:7076456-7076574 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 554-671
Cow position: chr18:7964924-7965041 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr18:9029311-9029428 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr18:13172832-13172712 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 554-671
Cow position: chr18:14048405-14048520 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 93

Conread position: 554-671
Cow position: chr18:14586783-14586666 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 54

Conread position: 554-671
Cow position: chr18:14815642-14815525 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr18:16418003-16417887 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr18:20998921-20998808 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 554-671
Cow position: chr18:35636657-35636540 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr18:43065202-43065319 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 80

Conread position: 554-671
Cow position: chr18:43823260-43823143 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr18:49161763-49161646 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr18:51713016-51712899 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 80

Conread position: 554-671
Cow position: chr18:55552658-55552775 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr18:56150963-56150844 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 554-672
Cow position: chr18:10575805-10575919 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr18:11322282-11322403 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 554-672
Cow position: chr18:11671503-11671620 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 45

Conread position: 554-672
Cow position: chr18:15172726-15172843 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 554-672
Cow position: chr18:15881164-15881046 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr18:21195646-21195527 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr18:21721587-21721469 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr18:22569337-22569219 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr18:29387920-29388036 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 554-672
Cow position: chr18:40758909-40759026 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr18:46880990-46880872 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr18:56191511-56191393 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr18:56361909-56361790 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 555-664
Cow position: chr18:5486945-5487054 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 555-664
Cow position: chr18:39002101-39001991 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 80

Conread position: 555-667
Cow position: chr18:81450-81562 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr18:9365606-9365718 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr18:51191059-51190949 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 555-669
Cow position: chr18:56181761-56181647 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr18:48407483-48407599 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr18:48818555-48818438 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 555-672
Cow position: chr18:15025371-15025489 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 103

Conread position: 555-672
Cow position: chr18:21528099-21528215 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 555-672
Cow position: chr18:22121186-22121070 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 107, 15

Conread position: 556-664
Cow position: chr18:30248431-30248324 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 106, 47

Conread position: 556-671
Cow position: chr18:52899762-52899877 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 556-672
Cow position: chr18:35076082-35076196 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 557-667
Cow position: chr18:46727289-46727402 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 557-672
Cow position: chr18:45478623-45478736 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 558-671
Cow position: chr18:6275513-6275626 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 558-672
Cow position: chr18:36458631-36458745 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 560-650
Cow position: chr18:2790923-2790833 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 80
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 560-660
Cow position: chr18:3115159-3115258 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 560-667
Cow position: chr18:16227260-16227367 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 561-667
Cow position: chr18:47314594-47314488 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-669
Cow position: chr18:52650766-52650875 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 561-669
Cow position: chr18:52658119-52658228 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 75

Conread position: 561-671
Cow position: chr18:35827715-35827604 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 561-671
Cow position: chr18:45395701-45395811 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 562-671
Cow position: chr18:11680421-11680530 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 562-671
Cow position: chr18:25647548-25647440 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 562-671
Cow position: chr18:30673939-30673831 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 562-671
Cow position: chr18:35058042-35058149 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 562-672
Cow position: chr18:11262660-11262770 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 564-663
Cow position: chr18:37703141-37703044 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 564-665
Cow position: chr18:5766132-5766234 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 564-671
Cow position: chr18:10904549-10904656 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 77

Conread position: 565-660
Cow position: chr18:48290734-48290639 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 565-671
Cow position: chr18:20864687-20864793 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 566-660
Cow position: chr18:55789287-55789193 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 566-672
Cow position: chr18:33299603-33299708 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 33

Conread position: 567-672
Cow position: chr18:49655421-49655525 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 570-669
Cow position: chr18:268102-268004 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 571-660
Cow position: chr18:38985397-38985486 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 573-669
Cow position: chr18:18819954-18819858 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 579-671
Cow position: chr18:2569518-2569611 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 402-497
Cow position: chr19:28014108-28014202 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 403-663
Cow position: chr19:2735418-2735145 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 93, 0

Conread position: 544-671
Cow position: chr19:28451110-28451236 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 547-665
Cow position: chr19:14473071-14472953 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 547-667
Cow position: chr19:10786652-10786532 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 547-671
Cow position: chr19:6688298-6688174 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 92, 87

Conread position: 547-672
Cow position: chr19:8033446-8033572 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 547-672
Cow position: chr19:14928965-14928839 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 113

Conread position: 548-667
Cow position: chr19:30533650-30533768 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 548-668
Cow position: chr19:34287521-34287641 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 46

Conread position: 554-650
Cow position: chr19:41498264-41498168 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 83, 79

Conread position: 554-654
Cow position: chr19:24062011-24062111 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-656
Cow position: chr19:21092494-21092595 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-659
Cow position: chr19:23785902-23786008 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 97
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 554-659
Cow position: chr19:32955600-32955703 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 554-659
Cow position: chr19:37333241-37333348 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 554-659
Cow position: chr19:39623071-39622966 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 45

Conread position: 554-660
Cow position: chr19:3222517-3222620 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 554-660
Cow position: chr19:6515975-6516080 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr19:8375587-8375481 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr19:12019171-12019281 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 554-663
Cow position: chr19:25999346-25999455 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr19:52773462-52773353 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-666
Cow position: chr19:14253348-14253460 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr19:1901287-1901174 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr19:5656396-5656283 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr19:10697847-10697959 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 554-667
Cow position: chr19:13755605-13755717 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr19:14592765-14592877 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr19:16096838-16096725 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr19:17664355-17664467 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 100
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 554-667
Cow position: chr19:18786611-18786497 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 554-667
Cow position: chr19:20661703-20661589 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 74

Conread position: 554-667
Cow position: chr19:21198841-21198954 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr19:22765331-22765444 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr19:25955128-25955015 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr19:26086909-26087022 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 80

Conread position: 554-667
Cow position: chr19:32457356-32457469 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr19:34654861-34654751 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 554-667
Cow position: chr19:35540018-35540133 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr19:35741871-35741985 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr19:38392511-38392625 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr19:46918555-46918669 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 554-669
Cow position: chr19:742463-742348 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr19:7543136-7543248 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 554-669
Cow position: chr19:15068279-15068165 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 554-669
Cow position: chr19:20671187-20671072 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 79

Conread position: 554-669
Cow position: chr19:46181101-46180985 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 554-670
Cow position: chr19:4252258-4252144 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 554-670
Cow position: chr19:44571843-44571956 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 554-671
Cow position: chr19:1355327-1355444 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr19:2138391-2138274 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr19:2577290-2577406 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 554-671
Cow position: chr19:4195443-4195559 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr19:4340193-4340076 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr19:6610287-6610170 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr19:7978844-7978730 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 554-671
Cow position: chr19:18750366-18750249 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr19:19499838-19499725 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 554-671
Cow position: chr19:21042831-21042949 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 554-671
Cow position: chr19:23005651-23005533 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 554-671
Cow position: chr19:25696491-25696376 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr19:28014194-28014308 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 554-671
Cow position: chr19:32177995-32177879 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 554-671
Cow position: chr19:33306811-33306927 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr19:33747567-33747685 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 62, 81

Conread position: 554-671
Cow position: chr19:37633638-37633521 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr19:43440877-43440994 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr19:51401296-51401177 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 554-671
Cow position: chr19:53418325-53418443 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 554-672
Cow position: chr19:4445906-4445788 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr19:8982842-8982724 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 45

Conread position: 554-672
Cow position: chr19:11817215-11817098 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr19:12036790-12036672 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr19:15437823-15437941 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr19:15863327-15863206 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 554-672
Cow position: chr19:20693213-20693329 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr19:21115021-21115139 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr19:27104464-27104578 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 554-672
Cow position: chr19:31595013-31595131 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr19:38756011-38756130 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 554-672
Cow position: chr19:39245614-39245731 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 554-672
Cow position: chr19:39661830-39661712 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr19:42240577-42240459 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr19:43178563-43178443 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 554-672
Cow position: chr19:43431607-43431490 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 80

Conread position: 554-672
Cow position: chr19:46822153-46822271 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr19:47118782-47118667 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 554-672
Cow position: chr19:52196265-52196384 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 555-652
Cow position: chr19:25655671-25655573 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 555-662
Cow position: chr19:39078043-39078150 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr19:23304779-23304667 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr19:23393685-23393796 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 555-667
Cow position: chr19:37647126-37647012 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 47

Conread position: 555-669
Cow position: chr19:34955982-34955868 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-669
Cow position: chr19:38340259-38340147 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 555-671
Cow position: chr19:2154360-2154244 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr19:8212126-8212006 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 555-671
Cow position: chr19:38596330-38596446 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 556-656
Cow position: chr19:54294867-54294767 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 556-663
Cow position: chr19:24669652-24669545 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 556-663
Cow position: chr19:33912917-33912810 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 556-665
Cow position: chr19:129816-129707 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 556-670
Cow position: chr19:53800238-53800123 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 558-669
Cow position: chr19:56382865-56382976 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 559-672
Cow position: chr19:25041609-25041495 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 561-668
Cow position: chr19:53543158-53543052 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 561-671
Cow position: chr19:24144739-24144848 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 561-671
Cow position: chr19:31846821-31846712 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 561-671
Cow position: chr19:39254778-39254668 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 561-671
Cow position: chr19:39360861-39360970 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 561-672
Cow position: chr19:10080790-10080901 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr19:31378888-31378777 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 562-663
Cow position: chr19:11145887-11145786 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-669
Cow position: chr19:36059654-36059761 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 562-672
Cow position: chr19:43418143-43418250 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 563-671
Cow position: chr19:19173841-19173949 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 564-660
Cow position: chr19:4537688-4537593 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 564-667
Cow position: chr19:39751205-39751308 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 564-671
Cow position: chr19:2208051-2207945 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 35

Conread position: 564-671
Cow position: chr19:20433054-20432947 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 94
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 564-671
Cow position: chr19:36176470-36176576 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 564-672
Cow position: chr19:33932417-33932310 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 565-670
Cow position: chr19:39794682-39794787 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 565-671
Cow position: chr19:23222361-23222466 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 569-672
Cow position: chr19:5433832-5433730 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 570-669
Cow position: chr19:10213401-10213500 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 572-672
Cow position: chr19:52381264-52381362 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 574-669
Cow position: chr19:25902073-25902167 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 384-497
Cow position: chr2:41451850-41451962 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 402-496
Cow position: chr2:39848286-39848380 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr2:5297378-5297473 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr2:20900830-20900735 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr2:21644814-21644719 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-505
Cow position: chr2:23493174-23493276 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 402-505
Cow position: chr2:71800452-71800349 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-663
Cow position: chr2:11616692-11616933 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 155, 43

Conread position: 403-497
Cow position: chr2:39810615-39810709 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 403-536
Cow position: chr2:9767784-9767652 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 408-518
Cow position: chr2:65270049-65269939 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 432-671
Cow position: chr2:29734103-29734347 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 542-672
Cow position: chr2:13354389-13354519 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 547-650
Cow position: chr2:28750688-28750790 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 547-665
Cow position: chr2:14633907-14634025 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 115, 27

Conread position: 547-667
Cow position: chr2:26501221-26501099 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 110, 0

Conread position: 547-672
Cow position: chr2:21171117-21171242 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 548-660
Cow position: chr2:1211048-1210936 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 548-660
Cow position: chr2:44222339-44222449 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 52

Conread position: 549-660
Cow position: chr2:82581210-82581099 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 550-667
Cow position: chr2:67724403-67724287 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 550-671
Cow position: chr2:39662420-39662541 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 50

Conread position: 550-671
Cow position: chr2:41176441-41176562 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 552-667
Cow position: chr2:6951934-6952049 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 552-667
Cow position: chr2:44986602-44986487 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 553-670
Cow position: chr2:85091314-85091197 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-649
Cow position: chr2:76122872-76122777 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-656
Cow position: chr2:40403295-40403193 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr2:26555863-26555756 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 554-659
Cow position: chr2:41184792-41184896 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 554-659
Cow position: chr2:55387275-55387379 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-659
Cow position: chr2:70945124-70945232 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 554-660
Cow position: chr2:13467425-13467530 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr2:13857316-13857210 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr2:14884009-14884116 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 47

Conread position: 554-660
Cow position: chr2:31499727-31499833 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr2:36963260-36963365 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr2:42607797-42607902 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 554-660
Cow position: chr2:43624801-43624695 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr2:44065318-44065423 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr2:47877705-47877811 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr2:70895755-70895862 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-660
Cow position: chr2:78750263-78750370 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 80

Conread position: 554-660
Cow position: chr2:81388416-81388522 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-662
Cow position: chr2:74260185-74260290 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position: chr2:16018556-16018449 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 554-663
Cow position: chr2:34917498-34917607 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr2:36056071-36055962 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr2:38965347-38965454 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 50, 10

Conread position: 554-663
Cow position: chr2:45710767-45710871 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-664
Cow position: chr2:21416040-21416150 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 108, 20

Conread position: 554-664
Cow position: chr2:38786079-38785969 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-664
Cow position: chr2:69237999-69238109 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-665
Cow position: chr2:44081175-44081288 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 554-666
Cow position: chr2:15815316-15815428 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-666
Cow position: chr2:80242463-80242354 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr2:988417-988529 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 554-667
Cow position: chr2:7193931-7194041 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 554-667
Cow position: chr2:9062996-9063109 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr2:14089506-14089618 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr2:16692882-16692995 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr2:22254436-22254323 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr2:28480389-28480278 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 85, 40

Conread position: 554-667
Cow position: chr2:28637556-28637444 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr2:31673001-31673112 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 84, 48

Conread position: 554-667
Cow position: chr2:35135699-35135810 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 554-667
Cow position: chr2:39263218-39263327 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 554-667
Cow position: chr2:39385137-39385025 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 554-667
Cow position: chr2:41311701-41311587 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr2:45259350-45259238 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr2:46184548-46184435 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr2:47116187-47116074 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr2:54654893-54654780 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr2:56102740-56102631 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 554-667
Cow position: chr2:56828842-56828728 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 554-667
Cow position: chr2:57939408-57939521 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr2:68488283-68488170 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr2:69581782-69581673 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 554-667
Cow position: chr2:76969452-76969338 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 554-669
Cow position: chr2:6883953-6884067 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 554-669
Cow position: chr2:10656111-10655996 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr2:16514515-16514631 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 32

Conread position: 554-669
Cow position: chr2:40380698-40380584 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 554-669
Cow position: chr2:42192170-42192285 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr2:53574834-53574948 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 554-669
Cow position: chr2:85739853-85739966 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 554-670
Cow position: chr2:43473916-43474032 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-670
Cow position: chr2:43978175-43978058 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 554-670
Cow position: chr2:59397333-59397217 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:840885-841002 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:5297465-5297582 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:7524410-7524298 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 554-671
Cow position: chr2:8505543-8505660 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:13579969-13580086 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:14826010-14826128 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 554-671
Cow position: chr2:15059337-15059225 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 554-671
Cow position: chr2:20900743-20900625 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr2:21644727-21644610 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:23493260-23493376 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr2:24709617-24709501 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 45

Conread position: 554-671
Cow position: chr2:26439000-26438886 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 17, 79

Conread position: 554-671
Cow position: chr2:27600819-27600702 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:33402763-33402646 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:33497478-33497361 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:37120909-37121026 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 47

Conread position: 554-671
Cow position: chr2:38662950-38662836 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 554-671
Cow position: chr2:38886925-38886808 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 18

Conread position: 554-671
Cow position: chr2:39078100-39078217 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:39280918-39281035 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 79

Conread position: 554-671
Cow position: chr2:42255157-42255276 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 554-671
Cow position: chr2:43596444-43596328 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr2:43994660-43994777 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:44170282-44170399 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:44482920-44482802 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 554-671
Cow position: chr2:45575270-45575153 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:46231043-46230924 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 554-671
Cow position: chr2:46734183-46734300 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:55632501-55632618 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:57776075-57776191 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 84, 45

Conread position: 554-671
Cow position: chr2:65269968-65269855 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 554-671
Cow position: chr2:66217814-66217697 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 80

Conread position: 554-671
Cow position: chr2:66916997-66916881 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 554-671
Cow position: chr2:70775840-70775723 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:72527678-72527795 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:73985295-73985178 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr2:74031262-74031145 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr2:306120-306004 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 554-672
Cow position: chr2:4254810-4254692 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr2:8295560-8295678 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr2:19212317-19212200 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 554-672
Cow position: chr2:25282832-25282951 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 554-672
Cow position: chr2:29268790-29268905 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 554-672
Cow position: chr2:36318652-36318539 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 554-672
Cow position: chr2:37072538-37072657 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 103
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr2:41710607-41710723 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 554-672
Cow position: chr2:46227194-46227310 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 554-672
Cow position: chr2:46312177-46312300 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 36

Conread position: 554-672
Cow position: chr2:46357571-46357690 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 554-672
Cow position: chr2:46379361-46379242 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 554-672
Cow position: chr2:53430457-53430570 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 554-672
Cow position: chr2:53649752-53649868 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 554-672
Cow position: chr2:56846478-56846597 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 554-672
Cow position: chr2:65604201-65604084 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr2:68084240-68084359 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 554-672
Cow position: chr2:68110017-68109899 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 80

Conread position: 554-672
Cow position: chr2:68413816-68413698 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr2:73466788-73466670 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr2:75638083-75637964 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 555-659
Cow position: chr2:52344489-52344592 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 555-660
Cow position: chr2:39815559-39815455 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 555-660
Cow position: chr2:42384131-42384235 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 555-667
Cow position: chr2:30910151-30910262 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 97
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 555-667
Cow position: chr2:35882602-35882493 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 83, 49

Conread position: 555-667
Cow position: chr2:37009145-37009257 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr2:44007022-44007133 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 97
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 555-669
Cow position: chr2:8575228-8575114 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 555-669
Cow position: chr2:20856096-20855983 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 555-669
Cow position: chr2:40879816-40879929 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 49, 28

Conread position: 555-671
Cow position: chr2:17940559-17940448 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 555-671
Cow position: chr2:50277749-50277863 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 555-671
Cow position: chr2:72410519-72410404 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 44

Conread position: 555-672
Cow position: chr2:13582311-13582426 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 555-672
Cow position: chr2:46171147-46171031 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 556-671
Cow position: chr2:12979294-12979179 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position: chr2:40691215-40691330 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 44

Conread position: 556-671
Cow position: chr2:41949751-41949865 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 556-671
Cow position: chr2:45619667-45619552 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position: chr2:46244298-46244183 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position: chr2:71800363-71800247 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 556-671
Cow position: chr2:76314127-76314016 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 556-672
Cow position: chr2:38659054-38658940 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 556-672
Cow position: chr2:46294307-46294193 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 557-667
Cow position: chr2:47644782-47644889 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 557-669
Cow position: chr2:44032801-44032689 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 557-671
Cow position: chr2:70539647-70539533 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 557-672
Cow position: chr2:48069673-48069558 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 55

Conread position: 557-672
Cow position: chr2:69676806-69676691 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 558-657
Cow position: chr2:46201998-46202096 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 558-660
Cow position: chr2:32114795-32114899 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 558-667
Cow position: chr2:46193037-46192927 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 558-667
Cow position: chr2:53533077-53532968 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 558-667
Cow position: chr2:61974524-61974634 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 558-669
Cow position: chr2:5981045-5981155 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 558-671
Cow position: chr2:13342250-13342137 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 558-671
Cow position: chr2:21356123-21356011 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 558-671
Cow position: chr2:78744431-78744543 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 558-671
Cow position: chr2:84997045-84997158 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 558-672
Cow position: chr2:41147606-41147716 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 560-659
Cow position: chr2:43609360-43609263 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 560-667
Cow position: chr2:6539505-6539400 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 560-667
Cow position: chr2:29717105-29716998 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-658
Cow position: chr2:7965855-7965952 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 73

Conread position: 561-667
Cow position: chr2:42927718-42927612 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 561-671
Cow position: chr2:13369394-13369505 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 74

Conread position: 561-671
Cow position: chr2:27173100-27173210 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 561-671
Cow position: chr2:30816690-30816798 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 561-671
Cow position: chr2:66615189-66615076 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 76

Conread position: 561-672
Cow position: chr2:2688906-2689016 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 561-672
Cow position: chr2:15674280-15674390 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 561-672
Cow position: chr2:26102513-26102624 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr2:56771576-56771687 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr2:70746530-70746641 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 74

Conread position: 562-667
Cow position: chr2:14710372-14710267 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 562-667
Cow position: chr2:15693964-15694068 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 562-671
Cow position: chr2:45469738-45469847 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 563-667
Cow position: chr2:39500767-39500870 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 564-660
Cow position: chr2:77241592-77241690 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 15

Conread position: 564-663
Cow position: chr2:31119751-31119850 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 564-668
Cow position: chr2:32264660-32264556 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 74, 70

Conread position: 564-671
Cow position: chr2:20980136-20980241 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 564-672
Cow position: chr2:28681169-28681061 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 565-667
Cow position: chr2:25283547-25283649 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 565-667
Cow position: chr2:25285291-25285393 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 565-667
Cow position: chr2:41954616-41954715 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 565-667
Cow position: chr2:59593009-59592907 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 566-667
Cow position: chr2:58310432-58310533 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 566-671
Cow position: chr2:28611354-28611247 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 566-672
Cow position: chr2:62978927-62978821 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 567-671
Cow position: chr2:50580108-50580211 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 568-656
Cow position: chr2:1658239-1658327 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 569-672
Cow position: chr2:47072932-47073036 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 570-671
Cow position: chr2:76110137-76110238 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 572-667
Cow position: chr2:36630713-36630808 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 573-672
Cow position: chr2:17444539-17444638 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 574-672
Cow position: chr2:28118247-28118345 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 575-667
Cow position: chr2:17967286-17967194 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 5

Conread position: 384-503
Cow position: chr20:24069479-24069597 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 385-510
Cow position: chr20:32866680-32866557 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 387-497
Cow position: chr20:9014680-9014572 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 402-497
Cow position: chr20:12048089-12048184 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 402-506
Cow position: chr20:7756946-7756842 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 408-533
Cow position: chr20:10539008-10539134 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 409-511
Cow position: chr20:34325879-34325775 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 413-617
Cow position: chr20:3294070-3293871 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 107, 93

Conread position: 496-672
Cow position: chr20:1140066-1139887 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 106
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 547-671
Cow position: chr20:11550127-11550252 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 547-671
Cow position: chr20:15117809-15117935 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 86, 32

Conread position: 548-672
Cow position: chr20:20312975-20312850 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 550-672
Cow position: chr20:41977186-41977307 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 551-671
Cow position: chr20:1640682-1640562 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 551-671
Cow position: chr20:41703919-41704039 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 87, 82

Conread position: 552-660
Cow position: chr20:33144787-33144681 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 35

Conread position: 554-656
Cow position: chr20:6054744-6054643 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 554-656
Cow position: chr20:12582179-12582077 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-656
Cow position: chr20:19328168-19328269 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 554-658
Cow position: chr20:15822086-15822189 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 554-659
Cow position: chr20:15761179-15761075 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 554-659
Cow position: chr20:18185347-18185452 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr20:6240761-6240655 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr20:15582267-15582162 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 554-660
Cow position: chr20:18399529-18399634 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr20:24521519-24521625 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr20:11341037-11340928 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 97
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr20:19313297-19313188 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 20

Conread position: 554-666
Cow position: chr20:25009875-25009763 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr20:6238879-6238766 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 80

Conread position: 554-667
Cow position: chr20:6258295-6258183 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 554-667
Cow position: chr20:7426422-7426308 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 81

Conread position: 554-667
Cow position: chr20:9014580-9014467 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr20:10235620-10235733 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr20:13269393-13269504 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr20:13967490-13967377 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr20:18100187-18100297 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 554-667
Cow position: chr20:18321029-18320914 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 554-667
Cow position: chr20:19751079-19751190 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 554-667
Cow position: chr20:22064841-22064951 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 554-667
Cow position: chr20:32636797-32636684 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr20:35145775-35145890 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 554-669
Cow position: chr20:32847120-32847236 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 554-669
Cow position: chr20:40304080-40303966 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 554-670
Cow position: chr20:35797374-35797489 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 554-671
Cow position: chr20:3034862-3034979 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 106, 57

Conread position: 554-671
Cow position: chr20:7806794-7806677 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr20:8429513-8429626 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 554-671
Cow position: chr20:10913566-10913450 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 554-671
Cow position: chr20:11614275-11614158 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr20:12064398-12064512 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 74, 61

Conread position: 554-671
Cow position: chr20:13267665-13267548 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr20:14740329-14740213 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr20:17251479-17251592 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 554-671
Cow position: chr20:20353146-20353031 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 554-671
Cow position: chr20:23871047-23870931 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr20:27314450-27314565 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 554-671
Cow position: chr20:34202415-34202532 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr20:35113299-35113416 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr20:36039980-36040095 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 554-671
Cow position: chr20:36779962-36779846 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr20:4621573-4621453 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 554-672
Cow position: chr20:4945477-4945360 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 554-672
Cow position: chr20:5950864-5950747 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 554-672
Cow position: chr20:10200109-10200233 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 50, 86

Conread position: 554-672
Cow position: chr20:12441923-12441806 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 554-672
Cow position: chr20:12996241-12996122 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr20:14718972-14718855 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 554-672
Cow position: chr20:16715168-16715286 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr20:20202984-20203102 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr20:23679378-23679260 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr20:31261501-31261616 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 554-672
Cow position: chr20:32866578-32866460 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr20:33170106-33169989 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 555-660
Cow position: chr20:21345175-21345280 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 83, 79

Conread position: 555-667
Cow position: chr20:3502063-3502175 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr20:10208573-10208683 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 555-667
Cow position: chr20:26058299-26058189 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 555-671
Cow position: chr20:10178342-10178225 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 555-671
Cow position: chr20:13876939-13876823 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr20:6096716-6096605 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 555-672
Cow position: chr20:31740446-31740332 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 556-660
Cow position: chr20:22313390-22313284 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 81

Conread position: 556-667
Cow position: chr20:3331524-3331413 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 556-667
Cow position: chr20:14806654-14806767 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 556-671
Cow position: chr20:7132118-7132233 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position: chr20:9473844-9473729 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 556-672
Cow position: chr20:8096660-8096774 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 557-663
Cow position: chr20:22235086-22235192 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 5

Conread position: 558-656
Cow position: chr20:20201764-20201861 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 558-672
Cow position: chr20:34001624-34001510 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 560-654
Cow position: chr20:15549123-15549029 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 560-667
Cow position: chr20:5702519-5702626 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 560-671
Cow position: chr20:31927684-31927573 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 560-672
Cow position: chr20:12783971-12784083 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 561-660
Cow position: chr20:8910699-8910798 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 77, 73

Conread position: 561-663
Cow position: chr20:4205738-4205840 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 561-663
Cow position: chr20:5998891-5998787 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 561-669
Cow position: chr20:21324901-21325010 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 561-671
Cow position: chr20:14620497-14620388 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 561-672
Cow position: chr20:27339842-27339951 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 561-672
Cow position: chr20:29844832-29844941 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 12

Conread position: 562-660
Cow position: chr20:7442348-7442249 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 562-667
Cow position: chr20:12420845-12420740 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-671
Cow position: chr20:14759888-14759779 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 562-671
Cow position: chr20:18551139-18551247 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 562-672
Cow position: chr20:14735453-14735562 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 562-672
Cow position: chr20:40423314-40423204 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 72

Conread position: 563-669
Cow position: chr20:26996311-26996413 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 564-669
Cow position: chr20:4893119-4893014 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 564-672
Cow position: chr20:14572578-14572470 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 565-667
Cow position: chr20:5826716-5826818 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 566-672
Cow position: chr20:23850064-23850170 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 568-672
Cow position: chr20:13023696-13023592 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 568-672
Cow position: chr20:16291253-16291358 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 569-667
Cow position: chr20:13752024-13752121 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 381-531
Cow position: chr21:32297820-32297667 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 18

Conread position: 402-497
Cow position: chr21:12366089-12366184 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 402-506
Cow position: chr21:46912246-46912350 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-511
Cow position: chr21:19702226-19702337 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 402-518
Cow position: chr21:27863817-27863701 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 403-532
Cow position: chr21:29069625-29069495 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 511-672
Cow position: chr21:34835678-34835519 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 101

Conread position: 546-654
Cow position: chr21:48484659-48484555 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 547-667
Cow position: chr21:42913964-42913844 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 548-667
Cow position: chr21:10032140-10032259 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 85

Conread position: 550-671
Cow position: chr21:13035264-13035141 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 552-672
Cow position: chr21:7672920-7673039 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 552-672
Cow position: chr21:39401387-39401501 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 554-655
Cow position: chr21:41957385-41957284 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-656
Cow position: chr21:29225273-29225171 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-658
Cow position: chr21:46849334-46849230 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr21:20162324-20162428 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 74

Conread position: 554-659
Cow position: chr21:29015103-29014998 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr21:42384294-42384399 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr21:42540431-42540327 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 554-659
Cow position: chr21:47802473-47802366 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 93
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 554-660
Cow position: chr21:16612418-16612524 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr21:27341808-27341702 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr21:32535765-32535871 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr21:37299254-37299364 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 554-660
Cow position: chr21:39888955-39888849 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr21:45971369-45971263 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-662
Cow position: chr21:13303608-13303716 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-662
Cow position: chr21:23150230-23150123 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position: chr21:12338958-12339067 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 79

Conread position: 554-665
Cow position: chr21:33350531-33350642 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 99
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 554-665
Cow position: chr21:48637957-48637845 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 554-667
Cow position: chr21:81859-81972 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 100
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr21:393810-393923 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr21:641373-641484 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 554-667
Cow position: chr21:6764913-6764802 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 554-667
Cow position: chr21:7132673-7132561 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr21:17511565-17511676 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 554-667
Cow position: chr21:19196379-19196265 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr21:30250419-30250307 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 39

Conread position: 554-667
Cow position: chr21:32191959-32192073 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 554-667
Cow position: chr21:33209987-33210100 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr21:37479745-37479858 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr21:38900562-38900676 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr21:40244223-40244337 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 554-668
Cow position: chr21:41155651-41155763 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 554-669
Cow position: chr21:34391181-34391067 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 554-669
Cow position: chr21:36762842-36762952 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 554-669
Cow position: chr21:42348889-42348774 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr21:725101-724986 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 554-671
Cow position: chr21:1483278-1483395 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr21:4279421-4279538 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr21:7717002-7716885 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr21:9416031-9416148 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr21:11740343-11740225 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 554-671
Cow position: chr21:11877173-11877285 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 554-671
Cow position: chr21:13410034-13409917 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr21:18568862-18568744 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr21:21480390-21480277 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 554-671
Cow position: chr21:23672535-23672648 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 554-671
Cow position: chr21:24607174-24607291 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 80

Conread position: 554-671
Cow position: chr21:27863730-27863614 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr21:28734123-28734006 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr21:30231914-30231796 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 554-671
Cow position: chr21:30257915-30257798 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr21:31159043-31159162 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 554-671
Cow position: chr21:33729222-33729340 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr21:38918004-38918120 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr21:40058595-40058711 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr21:40899125-40899242 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr21:44671542-44671659 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr21:4998696-4998580 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 554-672
Cow position: chr21:5153406-5153524 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr21:5649695-5649812 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 554-672
Cow position: chr21:8985338-8985456 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr21:12366176-12366294 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 84, 80

Conread position: 554-672
Cow position: chr21:13048407-13048290 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 554-672
Cow position: chr21:17282492-17282610 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr21:18713075-18713190 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 554-672
Cow position: chr21:20262545-20262427 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr21:20925717-20925600 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 554-672
Cow position: chr21:23683339-23683461 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 554-672
Cow position: chr21:26241613-26241732 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 554-672
Cow position: chr21:28512323-28512439 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 554-672
Cow position: chr21:29069539-29069422 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 554-672
Cow position: chr21:36163174-36163056 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 80

Conread position: 554-672
Cow position: chr21:42414313-42414196 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr21:42905589-42905472 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 555-660
Cow position: chr21:46777183-46777080 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 555-667
Cow position: chr21:2679342-2679454 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr21:4080144-4080258 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 555-671
Cow position: chr21:27124338-27124223 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 100

Conread position: 555-671
Cow position: chr21:47760567-47760681 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 555-672
Cow position: chr21:20044980-20044867 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 555-672
Cow position: chr21:28429239-28429356 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr21:34738388-34738506 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 555-672
Cow position: chr21:44252038-44251919 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 556-667
Cow position: chr21:33983019-33982907 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 556-670
Cow position: chr21:7564531-7564418 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 82, 60

Conread position: 556-671
Cow position: chr21:10727072-10727186 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 556-671
Cow position: chr21:22718990-22718875 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position: chr21:35899598-35899714 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 79

Conread position: 556-671
Cow position: chr21:40786461-40786576 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 556-672
Cow position: chr21:912177-912060 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 556-672
Cow position: chr21:34658825-34658941 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 556-672
Cow position: chr21:40265624-40265740 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 558-670
Cow position: chr21:41974586-41974474 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 558-671
Cow position: chr21:10151588-10151700 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 558-672
Cow position: chr21:15445286-15445172 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 559-667
Cow position: chr21:24858105-24858213 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 560-656
Cow position: chr21:30990473-30990378 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 560-660
Cow position: chr21:3498293-3498393 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 560-667
Cow position: chr21:23293361-23293255 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 560-667
Cow position: chr21:28919831-28919724 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 44, 68

Conread position: 560-672
Cow position: chr21:19258621-19258733 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 560-672
Cow position: chr21:31278574-31278686 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 97
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 561-663
Cow position: chr21:27743538-27743639 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 69

Conread position: 561-667
Cow position: chr21:8618070-8618176 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 561-667
Cow position: chr21:29484780-29484885 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 561-667
Cow position: chr21:38120903-38121009 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr21:33517-33628 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr21:6051302-6051413 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr21:9710908-9710796 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 562-672
Cow position: chr21:46132181-46132071 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 563-669
Cow position: chr21:46626875-46626982 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 563-672
Cow position: chr21:41597613-41597722 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 564-667
Cow position: chr21:28029196-28029299 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 564-672
Cow position: chr21:32237096-32237204 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 30

Conread position: 565-662
Cow position: chr21:14760380-14760477 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 69

Conread position: 566-660
Cow position: chr21:28881943-28882037 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 566-671
Cow position: chr21:23586677-23586782 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 567-656
Cow position: chr21:9359508-9359597 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 568-663
Cow position: chr21:42465632-42465727 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 568-669
Cow position: chr21:4282065-4281964 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 70, 66

Conread position: 569-671
Cow position: chr21:38449648-38449546 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 387-495
Cow position: chr22:15920013-15919907 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 402-497
Cow position: chr22:22155236-22155331 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr22:29881819-29881724 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr22:30710040-30710135 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-511
Cow position: chr22:898393-898502 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-532
Cow position: chr22:8283618-8283748 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-532
Cow position: chr22:8357249-8357381 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 402-533
Cow position: chr22:22054052-22054184 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 403-669
Cow position: chr22:9286823-9286555 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 175
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 92

Conread position: 405-517
Cow position: chr22:18654415-18654301 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 6, 108

Conread position: 407-671
Cow position: chr22:534073-534332 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 100, 0

Conread position: 408-515
Cow position: chr22:11805498-11805391 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 99, 89

Conread position: 547-667
Cow position: chr22:40399919-40400037 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 547-671
Cow position: chr22:43788415-43788288 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 548-667
Cow position: chr22:38439442-38439323 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 548-671
Cow position: chr22:10302727-10302849 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 548-672
Cow position: chr22:16812447-16812323 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 90, 86

Conread position: 548-672
Cow position: chr22:38313748-38313624 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 7

Conread position: 552-667
Cow position: chr22:28370666-28370781 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-648
Cow position: chr22:38959658-38959564 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-654
Cow position: chr22:15950655-15950555 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-658
Cow position: chr22:18654330-18654227 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 554-659
Cow position: chr22:17764097-17764204 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-659
Cow position: chr22:30472769-30472873 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 554-659
Cow position: chr22:45106197-45106091 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 554-660
Cow position: chr22:1064857-1064959 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 554-660
Cow position: chr22:1986730-1986837 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 24, 81

Conread position: 554-660
Cow position: chr22:8357336-8357442 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr22:9734578-9734683 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 554-660
Cow position: chr22:11037996-11038102 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr22:11837479-11837373 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr22:12682070-12681965 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 554-660
Cow position: chr22:13889638-13889744 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr22:24611354-24611248 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr22:28071276-28071382 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr22:31599105-31599210 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 554-660
Cow position: chr22:36193583-36193689 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr22:38940227-38940121 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr22:1610034-1609925 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr22:4119846-4119737 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr22:8412246-8412355 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr22:18258950-18259059 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-664
Cow position: chr22:30483634-30483744 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-665
Cow position: chr22:22155323-22155433 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-666
Cow position: chr22:4988837-4988725 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr22:891417-891305 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr22:898480-898592 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 74, 16

Conread position: 554-667
Cow position: chr22:2701950-2702063 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr22:3842348-3842462 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr22:4076176-4076064 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr22:4138384-4138271 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 40

Conread position: 554-667
Cow position: chr22:5836955-5837066 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-667
Cow position: chr22:7838327-7838440 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr22:8323970-8324080 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 83, 45

Conread position: 554-667
Cow position: chr22:8446654-8446770 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 78, 39

Conread position: 554-667
Cow position: chr22:10415637-10415750 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr22:10631097-10631207 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr22:10937111-10936998 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr22:13011555-13011442 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr22:13242158-13242271 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr22:13950894-13951008 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 554-667
Cow position: chr22:17993308-17993196 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 554-667
Cow position: chr22:21296001-21295891 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 554-667
Cow position: chr22:21502458-21502574 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 80, 45

Conread position: 554-667
Cow position: chr22:21890637-21890525 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr22:23865184-23865296 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr22:25206247-25206135 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr22:26151397-26151285 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 14, 38

Conread position: 554-667
Cow position: chr22:27322041-27322160 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 106
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 74, 40

Conread position: 554-667
Cow position: chr22:27700936-27701048 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 45

Conread position: 554-667
Cow position: chr22:28120513-28120626 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr22:31646216-31646329 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr22:33986043-33985931 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr22:34735372-34735485 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 80

Conread position: 554-667
Cow position: chr22:40374328-40374441 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr22:3993332-3993447 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr22:12572921-12573040 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 554-669
Cow position: chr22:34398733-34398617 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 554-669
Cow position: chr22:34476278-34476167 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 554-669
Cow position: chr22:41045192-41045077 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr22:2470525-2470408 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr22:2502560-2502676 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr22:6101591-6101475 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 554-671
Cow position: chr22:6610632-6610514 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 48

Conread position: 554-671
Cow position: chr22:10920142-10920025 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr22:11500504-11500617 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 554-671
Cow position: chr22:11987495-11987378 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr22:12637404-12637522 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 91, 40

Conread position: 554-671
Cow position: chr22:16273356-16273469 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 48

Conread position: 554-671
Cow position: chr22:18196230-18196348 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 72

Conread position: 554-671
Cow position: chr22:22160443-22160559 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr22:22861189-22861073 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr22:23856770-23856887 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr22:26134513-26134396 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr22:30689353-30689470 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr22:30712471-30712590 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 554-671
Cow position: chr22:39494482-39494364 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr22:42933766-42933649 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 84, 80

Conread position: 554-671
Cow position: chr22:43292180-43292062 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 50, 81

Conread position: 554-672
Cow position: chr22:645038-644921 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 554-672
Cow position: chr22:1484584-1484702 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 84, 80

Conread position: 554-672
Cow position: chr22:4043655-4043772 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 554-672
Cow position: chr22:4645499-4645619 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 554-672
Cow position: chr22:5042041-5042160 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 554-672
Cow position: chr22:6204572-6204454 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr22:8329271-8329388 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 554-672
Cow position: chr22:8481370-8481487 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 554-672
Cow position: chr22:12381621-12381739 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr22:12988016-12987898 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr22:13670448-13670330 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr22:13866364-13866485 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 49

Conread position: 554-672
Cow position: chr22:13957926-13957810 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 554-672
Cow position: chr22:14091509-14091392 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr22:17152401-17152517 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 554-672
Cow position: chr22:20626564-20626681 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 554-672
Cow position: chr22:21012112-21012230 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr22:22013443-22013559 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr22:25246632-25246749 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr22:25943203-25943322 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 554-672
Cow position: chr22:28289807-28289925 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr22:34726396-34726512 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 554-672
Cow position: chr22:39472654-39472536 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr22:40071691-40071813 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 555-660
Cow position: chr22:26106781-26106886 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 555-669
Cow position: chr22:17813951-17814065 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr22:15292975-15292856 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 555-672
Cow position: chr22:15398855-15398738 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 79

Conread position: 555-672
Cow position: chr22:30514978-30515092 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 556-663
Cow position: chr22:34441912-34441804 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 59

Conread position: 556-667
Cow position: chr22:8876995-8877107 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 556-667
Cow position: chr22:31196772-31196662 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 556-667
Cow position: chr22:34931025-34930913 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 556-671
Cow position: chr22:16235926-16235812 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 556-671
Cow position: chr22:38930790-38930675 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 556-672
Cow position: chr22:27431959-27431843 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 556-672
Cow position: chr22:47525436-47525550 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 557-660
Cow position: chr22:15039461-15039357 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 557-667
Cow position: chr22:43397744-43397852 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 557-671
Cow position: chr22:19340925-19341038 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 14, 46

Conread position: 558-663
Cow position: chr22:2403599-2403703 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 558-667
Cow position: chr22:10122114-10122223 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 558-667
Cow position: chr22:14602669-14602560 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 559-667
Cow position: chr22:15951149-15951042 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 561-667
Cow position: chr22:46611052-46610946 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-669
Cow position: chr22:26339488-26339597 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 561-672
Cow position: chr22:12892838-12892727 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 562-660
Cow position: chr22:9278633-9278731 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 562-665
Cow position: chr22:34750407-34750510 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 563-671
Cow position: chr22:34894703-34894811 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 564-667
Cow position: chr22:15490391-15490494 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 564-672
Cow position: chr22:4135384-4135494 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 564-672
Cow position: chr22:25743221-25743112 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 564-672
Cow position: chr22:30954771-30954879 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 565-660
Cow position: chr22:27171526-27171430 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 565-667
Cow position: chr22:26141007-26141107 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 565-672
Cow position: chr22:6754522-6754414 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 566-672
Cow position: chr22:15090474-15090580 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 571-667
Cow position: chr22:10683926-10683830 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 574-672
Cow position: chr22:31593119-31593021 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 578-660
Cow position: chr22:28665015-28665097 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 74
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 579-672
Cow position: chr22:40121132-40121038 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 384-505
Cow position: chr23:30244314-30244435 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 540-672
Cow position: chr23:3918385-3918253 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 550-660
Cow position: chr23:36309150-36309258 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 550-671
Cow position: chr23:2179924-2179804 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 550-672
Cow position: chr23:28206334-28206456 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 552-667
Cow position: chr23:7845011-7845129 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 554-655
Cow position: chr23:39762095-39762194 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 554-656
Cow position: chr23:18367423-18367524 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 554-658
Cow position: chr23:36129175-36129070 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 45

Conread position: 554-659
Cow position: chr23:1640538-1640643 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr23:8911205-8911310 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr23:11845014-11845120 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 79

Conread position: 554-660
Cow position: chr23:406431-406328 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 554-660
Cow position: chr23:1664415-1664521 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr23:7402433-7402539 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr23:29626141-29626247 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-662
Cow position: chr23:16563569-16563677 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr23:1605406-1605515 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr23:1905755-1905864 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr23:8918126-8918017 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr23:18698299-18698189 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 554-666
Cow position: chr23:1883120-1883232 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-666
Cow position: chr23:29441273-29441161 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr23:4579310-4579194 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 554-667
Cow position: chr23:9132939-9132826 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr23:9268317-9268429 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr23:9712840-9712953 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr23:9734146-9734254 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr23:13511460-13511572 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 554-669
Cow position: chr23:1670644-1670757 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-669
Cow position: chr23:14839008-14838894 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 85, 46

Conread position: 554-669
Cow position: chr23:21336762-21336647 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr23:25363070-25363186 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 554-669
Cow position: chr23:33601793-33601682 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 554-669
Cow position: chr23:36172273-36172389 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 106

Conread position: 554-670
Cow position: chr23:8959326-8959439 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 554-670
Cow position: chr23:30662897-30662785 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 554-671
Cow position: chr23:5162153-5162276 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 554-671
Cow position: chr23:10554284-10554168 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr23:20605554-20605434 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr23:26741723-26741605 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 85, 80

Conread position: 554-671
Cow position: chr23:27529564-27529448 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 554-671
Cow position: chr23:28118374-28118259 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 554-671
Cow position: chr23:31601731-31601614 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr23:40777990-40778106 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr23:344451-344333 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 84, 80

Conread position: 554-672
Cow position: chr23:7175347-7175465 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr23:7392556-7392440 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 91

Conread position: 554-672
Cow position: chr23:7937812-7937695 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 554-672
Cow position: chr23:11128959-11129079 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 554-672
Cow position: chr23:14164677-14164556 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 112

Conread position: 554-672
Cow position: chr23:16072957-16073075 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr23:18802546-18802428 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr23:24867029-24867147 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr23:25669343-25669225 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr23:26841176-26841295 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 45

Conread position: 554-672
Cow position: chr23:39793180-39793299 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 79

Conread position: 554-672
Cow position: chr23:40781055-40781171 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 555-651
Cow position: chr23:1922341-1922244 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 555-655
Cow position: chr23:20744861-20744761 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-656
Cow position: chr23:26231050-26231151 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 555-658
Cow position: chr23:6995241-6995143 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 555-667
Cow position: chr23:2799296-2799406 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 53, 28

Conread position: 555-667
Cow position: chr23:26319147-26319257 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 83, 18

Conread position: 555-671
Cow position: chr23:14739178-14739292 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 556-656
Cow position: chr23:3247317-3247417 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 556-659
Cow position: chr23:14896076-14895972 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 19, 45

Conread position: 556-660
Cow position: chr23:17796588-17796486 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 556-663
Cow position: chr23:13945486-13945593 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 556-667
Cow position: chr23:18322690-18322580 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 557-659
Cow position: chr23:1321464-1321362 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 557-663
Cow position: chr23:186901-187010 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 76

Conread position: 557-667
Cow position: chr23:21789041-21788931 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 558-669
Cow position: chr23:22804453-22804565 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 558-672
Cow position: chr23:39309384-39309270 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 560-667
Cow position: chr23:9235330-9235224 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 78, 39

Conread position: 560-671
Cow position: chr23:37065570-37065681 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 560-672
Cow position: chr23:533963-534074 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 560-672
Cow position: chr23:14580760-14580649 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 560-672
Cow position: chr23:26003797-26003909 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-667
Cow position: chr23:5870449-5870343 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 561-667
Cow position: chr23:36199027-36199133 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr23:12896868-12896756 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 561-672
Cow position: chr23:27563975-27563864 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 562-664
Cow position: chr23:6592958-6592857 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 37

Conread position: 562-669
Cow position: chr23:35366363-35366257 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 562-669
Cow position: chr23:35369275-35369169 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 562-671
Cow position: chr23:26795169-26795060 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 563-660
Cow position: chr23:31493613-31493711 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 563-672
Cow position: chr23:16583173-16583064 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 564-667
Cow position: chr23:11209746-11209849 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 565-663
Cow position: chr23:3434210-3434114 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 565-667
Cow position: chr23:21452995-21452893 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 567-671
Cow position: chr23:4608642-4608538 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 567-672
Cow position: chr23:13674177-13674073 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 93
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 568-671
Cow position: chr23:1254418-1254520 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 569-672
Cow position: chr23:5744839-5744942 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 570-667
Cow position: chr23:20057124-20057027 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 570-672
Cow position: chr23:15056898-15056797 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 576-663
Cow position: chr23:33696026-33695939 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 577-671
Cow position: chr23:39302465-39302559 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 381-501
Cow position: chr24:39289613-39289729 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 402-493
Cow position: chr24:27096273-27096364 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr24:28353773-28353868 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr24:32054285-32054380 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-519
Cow position: chr24:40129726-40129845 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 105, 93

Conread position: 408-518
Cow position: chr24:19658167-19658278 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 95, 104

Conread position: 410-505
Cow position: chr24:29180523-29180618 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 410-669
Cow position: chr24:36404587-36404332 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 92, 10

Conread position: 546-672
Cow position: chr24:43200582-43200454 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 547-665
Cow position: chr24:28689404-28689523 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 547-669
Cow position: chr24:44041316-44041193 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 548-669
Cow position: chr24:6154519-6154640 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 549-667
Cow position: chr24:34579181-34579299 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 549-672
Cow position: chr24:5652279-5652158 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 552-667
Cow position: chr24:11876582-11876697 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 552-672
Cow position: chr24:27844821-27844701 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-632
Cow position: chr24:3631218-3631296 (view UCSC Genome Browser custom track)
Alignm length: 79
Alignm identity: 71
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-653
Cow position: chr24:34272503-34272602 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-656
Cow position: chr24:18405603-18405505 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-658
Cow position: chr24:7301157-7301258 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-658
Cow position: chr24:30177937-30178041 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr24:22193426-22193531 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr24:27267336-27267441 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 50, 25

Conread position: 554-659
Cow position: chr24:37037318-37037421 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 85, 45

Conread position: 554-660
Cow position: chr24:6340718-6340824 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr24:23616396-23616501 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr24:27543775-27543669 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr24:27763503-27763608 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 554-660
Cow position: chr24:35332420-35332525 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 554-660
Cow position: chr24:39440857-39440750 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 95
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 554-660
Cow position: chr24:44054441-44054335 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr24:18741870-18741761 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr24:28496887-28496777 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 40

Conread position: 554-664
Cow position: chr24:39219145-39219036 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr24:7001368-7001254 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 554-667
Cow position: chr24:14279588-14279702 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 554-667
Cow position: chr24:14550206-14550319 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr24:15288558-15288671 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr24:16625800-16625687 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 80

Conread position: 554-667
Cow position: chr24:18485299-18485186 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr24:20874377-20874490 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr24:23556628-23556517 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 554-667
Cow position: chr24:27341323-27341210 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr24:31309122-31309235 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr24:36174082-36173969 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr24:38814672-38814785 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr24:29679611-29679495 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 81

Conread position: 554-669
Cow position: chr24:40300856-40300972 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 554-671
Cow position: chr24:6071296-6071412 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 554-671
Cow position: chr24:6914063-6913947 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 554-671
Cow position: chr24:15473056-15473174 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 554-671
Cow position: chr24:18266471-18266354 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr24:19466232-19466116 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 554-671
Cow position: chr24:19658248-19658367 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 554-671
Cow position: chr24:20024308-20024425 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 102
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr24:20225438-20225555 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 79

Conread position: 554-671
Cow position: chr24:24002679-24002793 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 554-671
Cow position: chr24:25320690-25320807 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr24:27290578-27290693 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 554-671
Cow position: chr24:27906129-27906252 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-671
Cow position: chr24:28353860-28353969 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 554-671
Cow position: chr24:28690401-28690519 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 554-671
Cow position: chr24:29781863-29781978 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr24:32054372-32054490 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr24:32693403-32693520 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr24:33238848-33238730 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr24:33621785-33621668 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr24:34564829-34564943 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 554-671
Cow position: chr24:36710841-36710958 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr24:37246517-37246400 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr24:38347380-38347498 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 554-671
Cow position: chr24:38655391-38655274 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr24:40908717-40908833 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 554-672
Cow position: chr24:814564-814446 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr24:3165522-3165640 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr24:5624531-5624413 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr24:10308975-10309094 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 115

Conread position: 554-672
Cow position: chr24:15246935-15246816 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr24:27754397-27754513 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 46

Conread position: 554-672
Cow position: chr24:32370210-32370091 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr24:38374986-38375104 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 47

Conread position: 555-660
Cow position: chr24:3493595-3493699 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 555-663
Cow position: chr24:33098785-33098678 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 555-667
Cow position: chr24:5754543-5754652 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 555-667
Cow position: chr24:17311507-17311395 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr24:39492998-39493111 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 555-671
Cow position: chr24:41985679-41985794 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 555-672
Cow position: chr24:29673221-29673338 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 556-660
Cow position: chr24:33153485-33153589 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 556-663
Cow position: chr24:27874305-27874414 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 556-664
Cow position: chr24:31159331-31159440 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 556-671
Cow position: chr24:19804390-19804505 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 557-663
Cow position: chr24:15666706-15666599 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 558-667
Cow position: chr24:32456131-32456240 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 558-671
Cow position: chr24:211686-211799 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 558-671
Cow position: chr24:43693039-43692929 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 104, 78

Conread position: 558-672
Cow position: chr24:20988295-20988183 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 558-672
Cow position: chr24:39483181-39483292 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 559-669
Cow position: chr24:17104861-17104750 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 560-669
Cow position: chr24:40129832-40129938 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 561-658
Cow position: chr24:18331444-18331542 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 74

Conread position: 562-667
Cow position: chr24:15508825-15508722 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 562-667
Cow position: chr24:31816294-31816399 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 562-672
Cow position: chr24:28303639-28303530 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 564-667
Cow position: chr24:5141652-5141754 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 564-671
Cow position: chr24:25424773-25424881 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 564-672
Cow position: chr24:591621-591730 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 568-660
Cow position: chr24:37650385-37650477 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 568-667
Cow position: chr24:27941293-27941196 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 574-669
Cow position: chr24:24250453-24250548 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 576-663
Cow position: chr24:30314313-30314226 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 403-497
Cow position: chr25:13325239-13325333 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 547-671
Cow position: chr25:23920137-23920012 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 548-667
Cow position: chr25:8482596-8482477 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 548-671
Cow position: chr25:18490789-18490912 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 84

Conread position: 550-663
Cow position: chr25:4488451-4488563 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 54, 83

Conread position: 550-667
Cow position: chr25:3992509-3992626 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 550-667
Cow position: chr25:33687179-33687060 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 552-671
Cow position: chr25:10643588-10643470 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 552-672
Cow position: chr25:21245885-21245766 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 554-648
Cow position: chr25:32278306-32278212 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-649
Cow position: chr25:17992418-17992323 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-655
Cow position: chr25:14791476-14791576 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 554-655
Cow position: chr25:26654630-26654730 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 554-658
Cow position: chr25:25948672-25948567 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 554-659
Cow position: chr25:21191210-21191315 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr25:25051661-25051556 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 93
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr25:1096300-1096406 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr25:5341374-5341480 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 40

Conread position: 554-660
Cow position: chr25:6464306-6464200 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr25:7216551-7216657 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr25:13840395-13840290 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr25:14104017-14104121 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 554-660
Cow position: chr25:15273413-15273518 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 554-660
Cow position: chr25:18294591-18294484 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 93
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 554-660
Cow position: chr25:20348581-20348687 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 94
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr25:24572795-24572903 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 554-662
Cow position: chr25:6421328-6421220 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 81

Conread position: 554-666
Cow position: chr25:31733013-31732901 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 79

Conread position: 554-666
Cow position: chr25:36871582-36871694 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr25:4860722-4860609 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr25:7800859-7800972 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr25:8347232-8347345 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 101
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr25:8485812-8485699 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr25:15714604-15714717 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr25:17975644-17975531 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr25:22346366-22346479 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr25:22531010-22531122 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 554-667
Cow position: chr25:33959537-33959428 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 554-669
Cow position: chr25:14225072-14224958 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-669
Cow position: chr25:36119924-36120038 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 554-671
Cow position: chr25:1735587-1735476 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 554-671
Cow position: chr25:5514730-5514846 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr25:6226764-6226881 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr25:12817096-12817212 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 554-671
Cow position: chr25:13720817-13720700 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 82

Conread position: 554-671
Cow position: chr25:16922069-16921954 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 554-671
Cow position: chr25:20060308-20060191 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 59

Conread position: 554-671
Cow position: chr25:22549891-22549773 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 554-671
Cow position: chr25:30816548-30816667 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 554-671
Cow position: chr25:33664173-33664056 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr25:3969119-3969237 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 95

Conread position: 554-672
Cow position: chr25:9023368-9023485 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 554-672
Cow position: chr25:10366029-10365910 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 17, 26

Conread position: 554-672
Cow position: chr25:11437079-11436961 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr25:13325325-13325440 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 20

Conread position: 554-672
Cow position: chr25:17658338-17658454 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 554-672
Cow position: chr25:26238593-26238712 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 81

Conread position: 554-672
Cow position: chr25:27531545-27531426 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 554-672
Cow position: chr25:30319726-30319608 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 104
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr25:12261170-12261061 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 555-667
Cow position: chr25:16064621-16064732 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 555-671
Cow position: chr25:33839112-33839227 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 78

Conread position: 555-672
Cow position: chr25:12204194-12204311 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr25:14117833-14117950 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 556-658
Cow position: chr25:36081600-36081700 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 556-667
Cow position: chr25:1837965-1838075 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 556-671
Cow position: chr25:26087240-26087355 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 557-667
Cow position: chr25:21193217-21193108 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 557-667
Cow position: chr25:21209222-21209112 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 558-663
Cow position: chr25:11830169-11830064 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 558-671
Cow position: chr25:14512843-14512955 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 561-663
Cow position: chr25:9990361-9990258 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 561-667
Cow position: chr25:6003261-6003155 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 71

Conread position: 561-669
Cow position: chr25:12824285-12824176 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 561-670
Cow position: chr25:14196585-14196695 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 561-672
Cow position: chr25:17712266-17712375 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 561-672
Cow position: chr25:22203960-22203849 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 97
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr25:26700770-26700878 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 561-672
Cow position: chr25:33256099-33256209 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 562-667
Cow position: chr25:10156322-10156427 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-667
Cow position: chr25:18935144-18935038 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 562-672
Cow position: chr25:8961194-8961304 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 563-672
Cow position: chr25:37594146-37594255 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 565-667
Cow position: chr25:28188216-28188113 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 36

Conread position: 566-667
Cow position: chr25:33691289-33691389 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 566-671
Cow position: chr25:11585253-11585358 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 567-667
Cow position: chr25:9842736-9842836 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 68

Conread position: 567-667
Cow position: chr25:20402983-20402884 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 568-669
Cow position: chr25:12778797-12778694 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 570-667
Cow position: chr25:36139345-36139442 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 570-671
Cow position: chr25:12174766-12174665 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 402-496
Cow position: chr26:32601006-32601100 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 402-507
Cow position: chr26:14395580-14395473 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 402-667
Cow position: chr26:19842188-19842444 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 202, 46

Conread position: 402-670
Cow position: chr26:25442289-25442031 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 235, 64

Conread position: 411-515
Cow position: chr26:8352623-8352729 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 547-672
Cow position: chr26:31701550-31701675 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 551-660
Cow position: chr26:32955885-32955776 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 551-672
Cow position: chr26:33044820-33044941 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr26:21929874-21929979 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr26:6188038-6188144 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr26:9491670-9491774 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 554-660
Cow position: chr26:20182502-20182608 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr26:31462615-31462720 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 554-663
Cow position: chr26:13270936-13270827 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr26:16796488-16796382 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 554-664
Cow position: chr26:29716816-29716925 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 21

Conread position: 554-664
Cow position: chr26:30652376-30652267 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-666
Cow position: chr26:6322339-6322451 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr26:8352701-8352813 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr26:8700308-8700195 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr26:13021407-13021294 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr26:27491760-27491650 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 554-667
Cow position: chr26:34739519-34739631 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 554-668
Cow position: chr26:6037698-6037584 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr26:4585468-4585353 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr26:18231109-18231223 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 554-669
Cow position: chr26:23926235-23926122 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 554-671
Cow position: chr26:3072221-3072104 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 54, 39

Conread position: 554-671
Cow position: chr26:6447865-6447748 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 65, 45

Conread position: 554-671
Cow position: chr26:11263379-11263496 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr26:12807772-12807658 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 554-671
Cow position: chr26:14174038-14174155 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr26:15857418-15857535 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 102
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr26:16549722-16549839 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr26:22180242-22180359 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr26:4444590-4444472 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr26:6714541-6714423 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr26:12238301-12238184 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr26:16167171-16167053 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr26:16585132-16585249 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 554-672
Cow position: chr26:24226685-24226567 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr26:25737213-25737331 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr26:26466976-26466861 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-672
Cow position: chr26:30752122-30752004 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-660
Cow position: chr26:7525725-7525620 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 555-660
Cow position: chr26:31137981-31137877 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 555-667
Cow position: chr26:11134953-11134842 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 98
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 555-667
Cow position: chr26:33202315-33202204 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 555-672
Cow position: chr26:26670999-26670887 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 555-672
Cow position: chr26:28442262-28442148 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 556-669
Cow position: chr26:4363049-4363161 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 556-669
Cow position: chr26:26888390-26888277 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 556-672
Cow position: chr26:33475417-33475533 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 557-660
Cow position: chr26:6030018-6029915 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 558-671
Cow position: chr26:3706546-3706659 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 560-667
Cow position: chr26:10209237-10209129 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 560-672
Cow position: chr26:32898123-32898011 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 561-669
Cow position: chr26:9082478-9082370 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 60

Conread position: 562-671
Cow position: chr26:6827916-6828025 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 75, 67

Conread position: 567-671
Cow position: chr26:3182194-3182090 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 571-672
Cow position: chr26:24280588-24280689 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 572-660
Cow position: chr26:30034645-30034557 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 62

Conread position: 574-667
Cow position: chr26:6793703-6793796 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 577-671
Cow position: chr26:17057448-17057541 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 381-533
Cow position: chr27:12191111-12191263 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 22

Conread position: 395-667
Cow position: chr27:3554689-3554422 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 178
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 176, 30

Conread position: 402-497
Cow position: chr27:24227475-24227570 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 403-511
Cow position: chr27:16984104-16983994 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 408-496
Cow position: chr27:7289797-7289885 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 76
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 547-667
Cow position: chr27:26313961-26314079 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 547-667
Cow position: chr27:28207036-28206916 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 548-672
Cow position: chr27:23083792-23083667 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 14, 9

Conread position: 551-671
Cow position: chr27:28018571-28018451 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 83

Conread position: 551-671
Cow position: chr27:28921662-28921782 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 552-651
Cow position: chr27:26856978-26857075 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 552-664
Cow position: chr27:20828474-20828586 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 82

Conread position: 552-669
Cow position: chr27:15342895-15343009 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 68

Conread position: 552-672
Cow position: chr27:16960430-16960309 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 554-654
Cow position: chr27:2901010-2901110 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-655
Cow position: chr27:22171530-22171429 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 19, 54

Conread position: 554-655
Cow position: chr27:25809292-25809392 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-656
Cow position: chr27:15272137-15272035 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-657
Cow position: chr27:23472487-23472384 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 16

Conread position: 554-658
Cow position: chr27:815596-815492 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-658
Cow position: chr27:4385834-4385939 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 554-659
Cow position: chr27:6074147-6074043 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-659
Cow position: chr27:27019869-27019974 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr27:1768404-1768508 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 554-660
Cow position: chr27:27449203-27449309 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 78

Conread position: 554-661
Cow position: chr27:27038611-27038719 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 13, 42

Conread position: 554-663
Cow position: chr27:15858860-15858968 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position: chr27:22220785-22220676 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr27:26427897-26428006 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-666
Cow position: chr27:26413024-26413136 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr27:7412614-7412501 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr27:11255744-11255632 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 554-667
Cow position: chr27:14670151-14670262 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 554-667
Cow position: chr27:15454444-15454330 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr27:16620222-16620110 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr27:18507863-18507750 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr27:25411284-25411401 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 554-667
Cow position: chr27:27843761-27843874 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr27:23502695-23502580 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr27:23930195-23930081 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 554-669
Cow position: chr27:24445925-24446040 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-670
Cow position: chr27:15927003-15926887 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-670
Cow position: chr27:23452711-23452595 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr27:1173312-1173430 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 554-671
Cow position: chr27:8962038-8962154 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 554-671
Cow position: chr27:9090570-9090687 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr27:10980095-10979978 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr27:11535866-11535982 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 554-671
Cow position: chr27:14902418-14902534 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 554-671
Cow position: chr27:21350784-21350901 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr27:22035142-22035259 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr27:22440373-22440254 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 554-671
Cow position: chr27:24331957-24331840 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr27:26398028-26398144 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr27:28931556-28931673 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr27:30362474-30362358 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 70

Conread position: 554-671
Cow position: chr27:30868509-30868624 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr27:2930365-2930483 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 70

Conread position: 554-672
Cow position: chr27:6550682-6550564 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 103
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr27:7289878-7289996 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr27:7958604-7958720 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 554-672
Cow position: chr27:12191218-12191336 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr27:12516428-12516310 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 84, 7

Conread position: 554-672
Cow position: chr27:16823045-16822927 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr27:18922681-18922564 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr27:21668894-21669011 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 554-672
Cow position: chr27:22426599-22426715 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 554-672
Cow position: chr27:22608905-22609023 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr27:22723475-22723593 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr27:23595504-23595386 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr27:24014510-24014627 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr27:24227562-24227680 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr27:25783833-25783715 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 45

Conread position: 554-672
Cow position: chr27:27141823-27141707 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 555-659
Cow position: chr27:16513652-16513755 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 555-660
Cow position: chr27:6541855-6541750 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-660
Cow position: chr27:9978057-9977952 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr27:299153-299265 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr27:22293482-22293594 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 97
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr27:11081426-11081310 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 84, 61

Conread position: 555-672
Cow position: chr27:11815529-11815646 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 556-672
Cow position: chr27:21393275-21393391 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 556-672
Cow position: chr27:23483454-23483337 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 80

Conread position: 556-672
Cow position: chr27:25380220-25380104 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 556-672
Cow position: chr27:28518514-28518399 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 557-667
Cow position: chr27:4673249-4673139 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 557-671
Cow position: chr27:26436646-26436759 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 558-667
Cow position: chr27:6500292-6500183 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 560-667
Cow position: chr27:23070135-23070241 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 560-672
Cow position: chr27:536682-536571 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 56

Conread position: 561-667
Cow position: chr27:8942459-8942565 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr27:2011879-2011989 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 561-672
Cow position: chr27:13638768-13638879 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 562-668
Cow position: chr27:6523269-6523163 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 563-671
Cow position: chr27:1183654-1183761 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 565-672
Cow position: chr27:8291790-8291898 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 565-672
Cow position: chr27:27040829-27040721 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 569-667
Cow position: chr27:13198133-13198035 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 33

Conread position: 579-671
Cow position: chr27:18215262-18215170 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 582-672
Cow position: chr27:26625329-26625238 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 81
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 384-501
Cow position: chr28:14742427-14742543 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 402-496
Cow position: chr28:23793675-23793581 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-536
Cow position: chr28:23459756-23459893 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 403-505
Cow position: chr28:14721194-14721092 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 545-671
Cow position: chr28:15264002-15263877 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 548-667
Cow position: chr28:10534204-10534087 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 548-672
Cow position: chr28:3246063-3246185 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 550-667
Cow position: chr28:16003793-16003910 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 88, 84

Conread position: 554-656
Cow position: chr28:5805256-5805357 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 554-656
Cow position: chr28:11759806-11759705 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 554-659
Cow position: chr28:3740583-3740688 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr28:16441118-16441222 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 554-659
Cow position: chr28:23007997-23007890 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 554-659
Cow position: chr28:23530595-23530700 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 49, 80

Conread position: 554-660
Cow position: chr28:4880533-4880427 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr28:5771097-5771206 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 554-660
Cow position: chr28:13356854-13356749 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 554-660
Cow position: chr28:13474039-13474142 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 554-660
Cow position: chr28:16211366-16211260 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr28:19564862-19564755 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 554-660
Cow position: chr28:22170989-22170881 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 554-660
Cow position: chr28:31110274-31110169 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-660
Cow position: chr28:34878242-34878136 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-661
Cow position: chr28:5792433-5792540 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 105

Conread position: 554-663
Cow position: chr28:20124517-20124625 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 554-663
Cow position: chr28:25056702-25056812 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 554-664
Cow position: chr28:3751050-3751160 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 45

Conread position: 554-666
Cow position: chr28:12430340-12430452 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 24

Conread position: 554-666
Cow position: chr28:26269060-26269174 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-667
Cow position: chr28:4536201-4536314 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr28:10682091-10681975 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 81

Conread position: 554-667
Cow position: chr28:11585477-11585364 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr28:14742531-14742644 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr28:14997795-14997905 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 554-667
Cow position: chr28:16215160-16215049 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 554-667
Cow position: chr28:16879537-16879428 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 554-667
Cow position: chr28:16919433-16919318 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-667
Cow position: chr28:17316591-17316703 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 103, 20

Conread position: 554-667
Cow position: chr28:19222414-19222302 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr28:21104116-21104004 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 83, 59

Conread position: 554-667
Cow position: chr28:21844687-21844799 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr28:25128252-25128139 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr28:28792204-28792317 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 84, 80

Conread position: 554-667
Cow position: chr28:30303462-30303352 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 554-668
Cow position: chr28:5837843-5837957 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr28:11426814-11426700 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 554-669
Cow position: chr28:20313006-20313120 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 554-669
Cow position: chr28:23480530-23480416 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 52, 7

Conread position: 554-670
Cow position: chr28:2800974-2801090 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 45

Conread position: 554-671
Cow position: chr28:2819489-2819606 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr28:3427133-3427016 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr28:4282761-4282644 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr28:7372520-7372404 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 554-671
Cow position: chr28:7751570-7751453 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr28:8103658-8103544 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 554-671
Cow position: chr28:10295920-10296037 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr28:10888394-10888511 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr28:13267511-13267629 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 554-671
Cow position: chr28:14933693-14933809 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr28:17287955-17288073 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 554-671
Cow position: chr28:17738348-17738231 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr28:18790742-18790857 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 554-671
Cow position: chr28:21354955-21355070 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 554-671
Cow position: chr28:30293859-30293742 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr28:2279935-2279815 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 554-672
Cow position: chr28:3144159-3144043 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 554-672
Cow position: chr28:10616219-10616103 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 554-672
Cow position: chr28:10977595-10977715 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 70, 81

Conread position: 554-672
Cow position: chr28:12619293-12619411 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 103
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr28:13371437-13371320 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 554-672
Cow position: chr28:14150965-14151083 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 90, 97

Conread position: 554-672
Cow position: chr28:15272530-15272412 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr28:18717394-18717273 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 20

Conread position: 554-672
Cow position: chr28:19222863-19222749 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 554-672
Cow position: chr28:21598522-21598405 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 555-660
Cow position: chr28:8787282-8787383 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 555-667
Cow position: chr28:7549330-7549219 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 555-672
Cow position: chr28:16925479-16925362 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 102
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr28:26743354-26743470 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 556-667
Cow position: chr28:4188259-4188377 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 114

Conread position: 556-672
Cow position: chr28:9390632-9390516 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 557-669
Cow position: chr28:34229963-34230075 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 557-671
Cow position: chr28:25762763-25762874 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 557-672
Cow position: chr28:3914444-3914558 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 558-663
Cow position: chr28:23839944-23840048 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 558-672
Cow position: chr28:3024177-3024063 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 558-672
Cow position: chr28:26784733-26784618 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 560-670
Cow position: chr28:31223857-31223749 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 560-672
Cow position: chr28:3408480-3408369 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 561-667
Cow position: chr28:1537443-1537550 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 18

Conread position: 561-667
Cow position: chr28:8372208-8372314 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 564-669
Cow position: chr28:5931094-5931199 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 564-672
Cow position: chr28:1099901-1099793 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 565-672
Cow position: chr28:17029973-17029867 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 566-660
Cow position: chr28:23410581-23410487 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 566-671
Cow position: chr28:1316049-1315944 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 568-667
Cow position: chr28:24646285-24646384 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 568-672
Cow position: chr28:2905326-2905429 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 569-672
Cow position: chr28:16246522-16246422 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 570-660
Cow position: chr28:5773389-5773476 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 570-671
Cow position: chr28:2862608-2862709 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 68, 64

Conread position: 573-667
Cow position: chr28:23254049-23253957 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 575-671
Cow position: chr28:4914350-4914254 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 581-667
Cow position: chr28:25498746-25498660 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 586-671
Cow position: chr28:9285615-9285530 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 385-532
Cow position: chr29:21197028-21196882 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 13

Conread position: 392-505
Cow position: chr29:2188724-2188609 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 402-497
Cow position: chr29:34774226-34774131 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-512
Cow position: chr29:2744635-2744525 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-518
Cow position: chr29:3539617-3539503 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 89

Conread position: 403-660
Cow position: chr29:13458632-13458888 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 170

Conread position: 404-532
Cow position: chr29:15944208-15944338 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 536-671
Cow position: chr29:41076324-41076187 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 547-667
Cow position: chr29:29974760-29974877 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 547-667
Cow position: chr29:43516964-43516844 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 547-668
Cow position: chr29:32308607-32308484 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 548-671
Cow position: chr29:26335660-26335537 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 550-659
Cow position: chr29:30028711-30028602 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 550-670
Cow position: chr29:39567406-39567527 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 51

Conread position: 554-654
Cow position: chr29:4875179-4875079 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr29:4002409-4002515 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr29:34745930-34745824 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 40

Conread position: 554-660
Cow position: chr29:36356575-36356681 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr29:45588751-45588643 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 554-663
Cow position: chr29:43252963-43252855 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-664
Cow position: chr29:32799983-32799869 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 554-667
Cow position: chr29:1582902-1582790 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 554-667
Cow position: chr29:3395834-3395947 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr29:4480450-4480339 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 47

Conread position: 554-667
Cow position: chr29:5062856-5062968 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr29:14501318-14501427 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 554-667
Cow position: chr29:15289464-15289577 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr29:19761996-19762109 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr29:25423548-25423661 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 60

Conread position: 554-667
Cow position: chr29:27825969-27826082 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 55, 40

Conread position: 554-667
Cow position: chr29:35501924-35501812 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr29:35630692-35630578 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr29:40902995-40902883 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 554-669
Cow position: chr29:6635828-6635943 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr29:6844905-6844791 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-669
Cow position: chr29:16609462-16609576 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 554-669
Cow position: chr29:26734757-26734872 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr29:35281227-35281340 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 45

Conread position: 554-669
Cow position: chr29:35291823-35291938 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr29:40583521-40583636 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-670
Cow position: chr29:29066150-29066266 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr29:87293-87181 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 554-671
Cow position: chr29:7041111-7040998 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 554-671
Cow position: chr29:7408165-7408048 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr29:11684736-11684853 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr29:15738620-15738504 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 554-671
Cow position: chr29:15944293-15944410 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 80

Conread position: 554-671
Cow position: chr29:19756172-19756289 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr29:20674084-20673964 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 554-671
Cow position: chr29:20933429-20933546 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr29:26017787-26017673 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 554-671
Cow position: chr29:26130507-26130624 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr29:26778612-26778725 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 554-671
Cow position: chr29:28195795-28195676 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 554-671
Cow position: chr29:29589193-29589073 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 554-671
Cow position: chr29:35434594-35434711 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr29:38581693-38581808 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr29:17381-17266 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 554-672
Cow position: chr29:686467-686350 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr29:2744548-2744430 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr29:4328158-4328275 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 103
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 554-672
Cow position: chr29:4625269-4625154 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 554-672
Cow position: chr29:5977397-5977280 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 554-672
Cow position: chr29:9638588-9638470 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr29:12005040-12004923 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr29:18878777-18878659 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr29:21196926-21196809 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr29:21443620-21443502 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr29:28775730-28775613 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr29:29056907-29057023 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 79

Conread position: 554-672
Cow position: chr29:31926566-31926449 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 554-672
Cow position: chr29:35636148-35636268 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 79, 112

Conread position: 554-672
Cow position: chr29:36329202-36329322 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 554-672
Cow position: chr29:44901978-44901864 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 555-659
Cow position: chr29:1307139-1307035 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 64

Conread position: 555-663
Cow position: chr29:11136163-11136058 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 555-672
Cow position: chr29:2071843-2071728 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 555-672
Cow position: chr29:10296715-10296598 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr29:26263580-26263692 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 556-660
Cow position: chr29:9332870-9332974 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 556-661
Cow position: chr29:26415827-26415932 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 556-667
Cow position: chr29:7290622-7290730 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 556-667
Cow position: chr29:22720854-22720963 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 556-671
Cow position: chr29:465676-465560 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 556-672
Cow position: chr29:2415085-2414975 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 557-667
Cow position: chr29:18748857-18748750 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 558-667
Cow position: chr29:17607144-17607253 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 558-667
Cow position: chr29:36216846-36216954 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 558-667
Cow position: chr29:36530591-36530700 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 560-659
Cow position: chr29:4120576-4120674 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 560-671
Cow position: chr29:5046544-5046433 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 561-656
Cow position: chr29:9686270-9686175 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 561-662
Cow position: chr29:1886946-1886844 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 561-671
Cow position: chr29:19338710-19338820 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 562-660
Cow position: chr29:25088485-25088583 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 72

Conread position: 562-669
Cow position: chr29:12784222-12784116 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 562-671
Cow position: chr29:7724912-7725023 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 562-671
Cow position: chr29:21933381-21933272 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 564-658
Cow position: chr29:18085324-18085418 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 564-669
Cow position: chr29:20178391-20178286 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 565-671
Cow position: chr29:28868366-28868473 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 566-671
Cow position: chr29:5919589-5919484 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 570-660
Cow position: chr29:38731365-38731454 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 570-669
Cow position: chr29:21236856-21236954 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 571-671
Cow position: chr29:35738529-35738429 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 576-656
Cow position: chr29:31594369-31594289 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 72
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 384-667
Cow position: chr3:4031514-4031783 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 123, 9

Conread position: 387-505
Cow position: chr3:74088559-74088443 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 392-505
Cow position: chr3:18887181-18887297 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 393-532
Cow position: chr3:31298550-31298413 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 395-536
Cow position: chr3:76138048-76138194 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 117

Conread position: 402-497
Cow position: chr3:2674644-2674739 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr3:31056387-31056292 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-505
Cow position: chr3:73394489-73394592 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 402-610
Cow position: chr3:64998438-64998643 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 402-668
Cow position: chr3:22220915-22221168 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 258, 105

Conread position: 403-533
Cow position: chr3:56976371-56976243 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 404-497
Cow position: chr3:524747-524838 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 405-533
Cow position: chr3:2035916-2036045 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 409-505
Cow position: chr3:17937229-17937133 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 409-506
Cow position: chr3:16752625-16752528 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 409-671
Cow position: chr3:72018471-72018729 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 411-672
Cow position: chr3:30463604-30463346 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 7, 38

Conread position: 547-665
Cow position: chr3:53384588-53384470 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 547-667
Cow position: chr3:14552573-14552693 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 547-667
Cow position: chr3:26219366-26219247 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 549-672
Cow position: chr3:13330073-13329953 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 550-667
Cow position: chr3:3884328-3884212 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 550-667
Cow position: chr3:50768377-50768493 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 550-672
Cow position: chr3:4461791-4461669 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 550-672
Cow position: chr3:19198379-19198501 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 551-660
Cow position: chr3:55190051-55189942 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 42

Conread position: 554-650
Cow position: chr3:55319168-55319264 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 84, 80

Conread position: 554-652
Cow position: chr3:21302729-21302630 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 554-655
Cow position: chr3:5365387-5365489 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 9, 81

Conread position: 554-656
Cow position: chr3:81371358-81371460 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-657
Cow position: chr3:42423629-42423526 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-658
Cow position: chr3:2483155-2483259 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-658
Cow position: chr3:26981053-26981157 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-658
Cow position: chr3:48241323-48241427 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr3:45184143-45184039 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 554-659
Cow position: chr3:52486984-52487089 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 75

Conread position: 554-660
Cow position: chr3:522427-522533 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 40

Conread position: 554-660
Cow position: chr3:5851225-5851116 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 97, 40

Conread position: 554-660
Cow position: chr3:20129643-20129750 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 554-660
Cow position: chr3:37599714-37599608 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr3:37982418-37982312 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr3:46161143-46161037 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr3:69766534-69766429 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr3:76614344-76614450 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr3:80071819-80071924 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position: chr3:31206574-31206683 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr3:71497444-71497334 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 554-663
Cow position: chr3:77496519-77496628 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-664
Cow position: chr3:22872350-22872239 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 554-664
Cow position: chr3:22908132-22908022 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-664
Cow position: chr3:53903888-53903999 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 554-664
Cow position: chr3:66610136-66610026 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-665
Cow position: chr3:24852885-24852774 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-666
Cow position: chr3:20802929-20802816 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 14, 47

Conread position: 554-667
Cow position: chr3:2397081-2396968 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr3:11019820-11019931 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 554-667
Cow position: chr3:14466002-14465893 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 554-667
Cow position: chr3:16547378-16547491 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr3:17695304-17695190 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr3:20663836-20663723 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr3:23169368-23169255 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr3:36672303-36672188 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 554-667
Cow position: chr3:57022277-57022389 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr3:61539498-61539611 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr3:61678393-61678506 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr3:63688060-63687948 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr3:66978545-66978658 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 100
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 84, 80

Conread position: 554-667
Cow position: chr3:68647862-68647975 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 79

Conread position: 554-667
Cow position: chr3:72776942-72777056 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 554-667
Cow position: chr3:77227020-77227133 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 80

Conread position: 554-667
Cow position: chr3:79884784-79884672 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 99
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr3:83920900-83921013 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-668
Cow position: chr3:7858054-7858169 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 554-669
Cow position: chr3:210024-210140 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 554-669
Cow position: chr3:7678375-7678488 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 554-669
Cow position: chr3:49678824-49678939 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr3:65058404-65058517 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 554-669
Cow position: chr3:68514847-68514733 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-669
Cow position: chr3:78076891-78077006 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-670
Cow position: chr3:14263094-14263210 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-670
Cow position: chr3:61857198-61857314 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-670
Cow position: chr3:66014107-66014224 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 554-670
Cow position: chr3:82618093-82618205 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 554-671
Cow position: chr3:2216062-2216178 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr3:4457374-4457257 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr3:13118049-13118164 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 8, 33

Conread position: 554-671
Cow position: chr3:13899751-13899634 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr3:17952358-17952475 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr3:18887281-18887400 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 554-671
Cow position: chr3:19711613-19711497 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 554-671
Cow position: chr3:24549130-24549013 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr3:24639292-24639406 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr3:25690490-25690604 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 554-671
Cow position: chr3:27289639-27289756 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr3:31056300-31056183 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 80

Conread position: 554-671
Cow position: chr3:41053516-41053628 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 554-671
Cow position: chr3:42177862-42177977 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 554-671
Cow position: chr3:42671023-42671139 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr3:48269565-48269682 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr3:48566967-48566848 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 554-671
Cow position: chr3:48852264-48852149 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 554-671
Cow position: chr3:49461235-49461118 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 80

Conread position: 554-671
Cow position: chr3:49650082-49650199 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 49

Conread position: 554-671
Cow position: chr3:50099195-50099313 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr3:51604905-51604788 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr3:52147974-52147861 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 554-671
Cow position: chr3:53112870-53112988 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr3:53592998-53592882 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 554-671
Cow position: chr3:57554145-57554029 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 95

Conread position: 554-671
Cow position: chr3:57754778-57754665 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 554-671
Cow position: chr3:59604573-59604688 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr3:67929564-67929449 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 554-671
Cow position: chr3:72018825-72018938 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 84, 31

Conread position: 554-671
Cow position: chr3:78200969-78201086 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr3:79592187-79592070 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr3:2024886-2025004 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr3:2674731-2674849 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 104
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 84, 80

Conread position: 554-672
Cow position: chr3:5101058-5100941 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 554-672
Cow position: chr3:6402999-6403117 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr3:7566717-7566599 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr3:12712221-12712103 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr3:15661999-15661880 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr3:15954375-15954257 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr3:17331470-17331588 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr3:18066836-18066955 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 554-672
Cow position: chr3:18459818-18459700 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr3:26920597-26920716 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 56

Conread position: 554-672
Cow position: chr3:29172085-29172203 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr3:30179786-30179903 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 10

Conread position: 554-672
Cow position: chr3:35299376-35299494 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 39

Conread position: 554-672
Cow position: chr3:41367281-41367164 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr3:48900800-48900682 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 100, 74

Conread position: 554-672
Cow position: chr3:50329373-50329255 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr3:51012831-51012713 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr3:53270528-53270646 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr3:53573048-53572930 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr3:54959893-54960010 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr3:59514813-59514931 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr3:69849800-69849680 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 83, 79

Conread position: 554-672
Cow position: chr3:70401605-70401722 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr3:70895748-70895866 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr3:79292537-79292654 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 554-672
Cow position: chr3:79902205-79902323 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 555-658
Cow position: chr3:83988184-83988287 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr3:29887721-29887611 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 555-667
Cow position: chr3:33698424-33698536 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 73, 80

Conread position: 555-667
Cow position: chr3:65800298-65800408 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 38

Conread position: 555-668
Cow position: chr3:80053831-80053718 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-670
Cow position: chr3:27285928-27286043 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr3:8393049-8393165 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr3:17222439-17222329 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 555-671
Cow position: chr3:38346906-38347020 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 555-671
Cow position: chr3:49382655-49382771 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr3:51033048-51033163 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 555-671
Cow position: chr3:55117268-55117153 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 556-660
Cow position: chr3:10958524-10958421 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 556-660
Cow position: chr3:59630796-59630691 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 556-667
Cow position: chr3:74533051-74533163 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 556-670
Cow position: chr3:12286939-12287052 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 556-671
Cow position: chr3:25691452-25691568 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 556-671
Cow position: chr3:65968859-65968973 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 556-672
Cow position: chr3:48530342-48530457 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 556-672
Cow position: chr3:70333769-70333656 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 557-672
Cow position: chr3:58951326-58951441 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 558-671
Cow position: chr3:62826917-62826804 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 558-671
Cow position: chr3:79148570-79148457 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 558-672
Cow position: chr3:72675793-72675907 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 559-672
Cow position: chr3:37041136-37041247 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 560-663
Cow position: chr3:12670985-12670879 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 560-667
Cow position: chr3:13513029-13512921 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 560-671
Cow position: chr3:81939959-81940070 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-658
Cow position: chr3:53150036-53150133 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 561-660
Cow position: chr3:15057889-15057790 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-660
Cow position: chr3:58383677-58383776 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-660
Cow position: chr3:66885331-66885230 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 561-662
Cow position: chr3:56059516-56059617 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 561-667
Cow position: chr3:19006376-19006482 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 561-667
Cow position: chr3:45534590-45534485 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 561-667
Cow position: chr3:65020043-65020149 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 561-668
Cow position: chr3:18854802-18854909 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr3:31309645-31309535 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 561-672
Cow position: chr3:55085475-55085364 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-660
Cow position: chr3:23471758-23471660 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 562-667
Cow position: chr3:5096913-5097019 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 562-667
Cow position: chr3:17937129-17937024 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-667
Cow position: chr3:80581381-80581486 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 563-671
Cow position: chr3:83816082-83815974 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 75, 70

Conread position: 563-672
Cow position: chr3:28898511-28898403 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 563-672
Cow position: chr3:69962000-69961891 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 564-666
Cow position: chr3:76091998-76092099 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 564-667
Cow position: chr3:26903827-26903930 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 564-669
Cow position: chr3:23876710-23876815 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 70

Conread position: 564-671
Cow position: chr3:59001033-59000927 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 565-667
Cow position: chr3:73443374-73443272 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 567-667
Cow position: chr3:19789404-19789304 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 569-671
Cow position: chr3:5416514-5416412 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 570-672
Cow position: chr3:26682075-26681974 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 574-667
Cow position: chr3:26065723-26065816 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 574-669
Cow position: chr3:34392374-34392279 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 25

Conread position: 574-669
Cow position: chr3:83369044-83369139 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 579-671
Cow position: chr3:79208276-79208184 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 387-505
Cow position: chr4:51866515-51866633 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 402-501
Cow position: chr4:42672802-42672901 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-511
Cow position: chr4:49409096-49409207 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 402-667
Cow position: chr4:59106259-59105980 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 408-667
Cow position: chr4:3251965-3251705 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 99, 152

Conread position: 408-672
Cow position: chr4:26746071-26746320 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 531-667
Cow position: chr4:21058690-21058555 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 107, 68

Conread position: 544-672
Cow position: chr4:39128239-39128367 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 59, 26

Conread position: 547-672
Cow position: chr4:37342828-37342953 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 548-657
Cow position: chr4:46435160-46435269 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 548-663
Cow position: chr4:2141457-2141572 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 52

Conread position: 548-663
Cow position: chr4:30690435-30690551 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 548-667
Cow position: chr4:46477226-46477108 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 549-660
Cow position: chr4:45511261-45511151 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 551-656
Cow position: chr4:19497535-19497430 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 552-658
Cow position: chr4:30574172-30574278 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 94
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 552-671
Cow position: chr4:54937602-54937721 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-642
Cow position: chr4:32260129-32260041 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-652
Cow position: chr4:22906758-22906854 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 554-654
Cow position: chr4:48409841-48409738 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 554-655
Cow position: chr4:45662782-45662681 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr4:9815634-9815529 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr4:21257411-21257306 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 94
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr4:41999466-41999363 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 554-659
Cow position: chr4:52017132-52017028 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr4:7780-7674 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 84, 80

Conread position: 554-660
Cow position: chr4:7571127-7571234 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 554-660
Cow position: chr4:11187173-11187283 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 554-660
Cow position: chr4:16799474-16799369 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 554-660
Cow position: chr4:39231805-39231699 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr4:51850913-51851020 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-661
Cow position: chr4:46668288-46668395 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-662
Cow position: chr4:27997402-27997510 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 91

Conread position: 554-663
Cow position: chr4:9596-9489 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 8

Conread position: 554-663
Cow position: chr4:10731937-10732045 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position: chr4:19584422-19584531 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr4:20327997-20327889 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 554-663
Cow position: chr4:23647125-23647016 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr4:48212758-48212649 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 80

Conread position: 554-664
Cow position: chr4:561119-561228 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-665
Cow position: chr4:44782092-44782203 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-666
Cow position: chr4:41186650-41186537 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 554-667
Cow position: chr4:480289-480176 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr4:1463001-1463114 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr4:2893742-2893855 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr4:3687646-3687759 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr4:7430037-7430150 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 45

Conread position: 554-667
Cow position: chr4:9795653-9795540 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr4:13327239-13327127 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 554-667
Cow position: chr4:14152792-14152905 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr4:26009164-26009277 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr4:27540339-27540452 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr4:36840995-36841110 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 554-667
Cow position: chr4:37553326-37553213 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr4:38067601-38067714 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr4:48152651-48152537 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 554-667
Cow position: chr4:48485711-48485831 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr4:49213001-49212890 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 554-667
Cow position: chr4:51898720-51898834 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr4:53100524-53100636 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 554-667
Cow position: chr4:56409900-56410012 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 46

Conread position: 554-667
Cow position: chr4:62471786-62471899 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 80

Conread position: 554-667
Cow position: chr4:66112359-66112246 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr4:68362657-68362773 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-668
Cow position: chr4:18095958-18095847 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-668
Cow position: chr4:34209744-34209858 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr4:11193900-11194015 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 100
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr4:12003941-12004056 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr4:13668898-13668785 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 45

Conread position: 554-669
Cow position: chr4:42424083-42423969 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-669
Cow position: chr4:43370132-43370017 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr4:620434-620319 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 554-671
Cow position: chr4:4981688-4981805 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 79

Conread position: 554-671
Cow position: chr4:9136995-9137109 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 554-671
Cow position: chr4:9444971-9444856 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 554-671
Cow position: chr4:10703967-10703850 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr4:11201535-11201652 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr4:11671168-11671287 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 554-671
Cow position: chr4:11872194-11872077 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr4:16736221-16736338 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr4:17833187-17833071 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-671
Cow position: chr4:19265291-19265407 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr4:22138518-22138401 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr4:22215938-22215821 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 61

Conread position: 554-671
Cow position: chr4:23060288-23060168 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 554-671
Cow position: chr4:25806617-25806733 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 554-671
Cow position: chr4:26400675-26400791 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr4:31023161-31023276 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 37

Conread position: 554-671
Cow position: chr4:34208646-34208763 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 80

Conread position: 554-671
Cow position: chr4:36893071-36893188 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr4:42672889-42673006 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr4:43148122-43148238 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 554-671
Cow position: chr4:45644595-45644477 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 81

Conread position: 554-671
Cow position: chr4:49409183-49409300 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr4:51903320-51903437 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr4:54468578-54468460 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr4:55271041-55270926 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 554-671
Cow position: chr4:61972757-61972640 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 20

Conread position: 554-671
Cow position: chr4:62772217-62772099 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr4:68944458-68944341 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr4:5610352-5610239 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 46

Conread position: 554-672
Cow position: chr4:11901845-11901727 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr4:15904816-15904934 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr4:19582898-19582780 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 99

Conread position: 554-672
Cow position: chr4:19597595-19597480 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 554-672
Cow position: chr4:20117130-20117012 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 116, 45

Conread position: 554-672
Cow position: chr4:21246846-21246728 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr4:22010340-22010223 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 554-672
Cow position: chr4:24119193-24119073 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 554-672
Cow position: chr4:26469362-26469484 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 554-672
Cow position: chr4:28399689-28399572 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 554-672
Cow position: chr4:37915611-37915496 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 554-672
Cow position: chr4:37935563-37935445 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr4:38945763-38945881 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr4:38999145-38999262 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr4:40414913-40414796 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 554-672
Cow position: chr4:44839167-44839049 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr4:45775623-45775506 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr4:46274911-46275029 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr4:60897555-60897437 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr4:61450486-61450605 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 103, 0

Conread position: 554-672
Cow position: chr4:69406086-69406204 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 555-644
Cow position: chr4:46069023-46069112 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 555-659
Cow position: chr4:36730909-36731013 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 86, 79

Conread position: 555-660
Cow position: chr4:11090967-11090863 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 555-660
Cow position: chr4:19097011-19097115 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 555-666
Cow position: chr4:27510990-27511101 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr4:23599889-23600002 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 555-667
Cow position: chr4:31136474-31136587 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 555-667
Cow position: chr4:56852616-56852728 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 555-669
Cow position: chr4:3850272-3850385 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 555-671
Cow position: chr4:12591492-12591376 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr4:33090028-33089910 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 555-671
Cow position: chr4:41441284-41441400 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr4:23451377-23451260 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 556-664
Cow position: chr4:49629216-49629325 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 556-667
Cow position: chr4:13271868-13271979 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 556-667
Cow position: chr4:22072953-22072842 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 556-667
Cow position: chr4:34223612-34223719 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 556-671
Cow position: chr4:4321286-4321171 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 556-672
Cow position: chr4:37620167-37620052 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 558-660
Cow position: chr4:14742981-14743083 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 558-666
Cow position: chr4:15872000-15871893 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 558-669
Cow position: chr4:24002247-24002137 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 558-672
Cow position: chr4:43866129-43866013 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 559-667
Cow position: chr4:4085413-4085306 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 559-671
Cow position: chr4:34171846-34171736 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 560-663
Cow position: chr4:1915854-1915751 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 560-663
Cow position: chr4:10412103-10412205 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 560-667
Cow position: chr4:33971173-33971065 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 561-660
Cow position: chr4:52748733-52748634 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 561-667
Cow position: chr4:39455779-39455885 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 561-667
Cow position: chr4:46385853-46385747 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr4:21064764-21064874 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 38

Conread position: 561-672
Cow position: chr4:40576191-40576081 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 562-667
Cow position: chr4:19438184-19438289 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 562-667
Cow position: chr4:27529839-27529944 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 562-667
Cow position: chr4:44073044-44072939 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 562-671
Cow position: chr4:20139793-20139685 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 564-672
Cow position: chr4:61969910-61969802 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 565-667
Cow position: chr4:20298998-20299101 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 565-672
Cow position: chr4:41867173-41867280 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 565-672
Cow position: chr4:53763390-53763282 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 69

Conread position: 566-660
Cow position: chr4:56514209-56514115 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 566-672
Cow position: chr4:33623448-33623554 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 569-671
Cow position: chr4:54667958-54667856 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 570-672
Cow position: chr4:15462539-15462438 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 570-672
Cow position: chr4:23847317-23847215 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 571-666
Cow position: chr4:35981724-35981819 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 571-669
Cow position: chr4:34641994-34641896 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 574-671
Cow position: chr4:47289808-47289905 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 575-670
Cow position: chr4:34310716-34310621 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 387-497
Cow position: chr5:34560791-34560900 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 387-497
Cow position: chr5:34915790-34915901 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 402-496
Cow position: chr5:37255692-37255598 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-506
Cow position: chr5:27015357-27015460 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 402-508
Cow position: chr5:75259492-75259600 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 402-525
Cow position: chr5:33977330-33977450 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 408-497
Cow position: chr5:34506256-34506167 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 408-532
Cow position: chr5:27010964-27011090 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 518-670
Cow position: chr5:10789964-10789811 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 37

Conread position: 526-672
Cow position: chr5:11668455-11668310 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 49, 29

Conread position: 527-671
Cow position: chr5:35125742-35125884 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 535-672
Cow position: chr5:58144873-58144735 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 49, 23

Conread position: 546-672
Cow position: chr5:55756699-55756570 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 547-647
Cow position: chr5:35763034-35763134 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 547-667
Cow position: chr5:37091031-37090911 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 547-667
Cow position: chr5:66296984-66297102 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 547-671
Cow position: chr5:40357126-40357003 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 9

Conread position: 547-671
Cow position: chr5:50637575-50637697 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 547-672
Cow position: chr5:72149993-72150122 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 26, 8

Conread position: 548-660
Cow position: chr5:53055808-53055697 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 548-663
Cow position: chr5:57935368-57935253 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 13

Conread position: 548-672
Cow position: chr5:45226084-45225956 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 89

Conread position: 550-660
Cow position: chr5:2288812-2288703 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 9

Conread position: 550-672
Cow position: chr5:15478855-15478982 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 552-666
Cow position: chr5:46023429-46023316 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 552-666
Cow position: chr5:46080507-46080394 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 552-666
Cow position: chr5:46130031-46129918 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 553-672
Cow position: chr5:23856413-23856293 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 554-649
Cow position: chr5:66972153-66972248 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-654
Cow position: chr5:12867098-12866998 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-655
Cow position: chr5:50950304-50950405 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-656
Cow position: chr5:64844366-64844265 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-656
Cow position: chr5:72045890-72045788 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-657
Cow position: chr5:52269435-52269332 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr5:34442042-34441936 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 554-660
Cow position: chr5:16184840-16184946 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr5:26377916-26377810 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr5:28302989-28302883 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr5:29827804-29827910 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr5:33414654-33414552 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-660
Cow position: chr5:44583367-44583262 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr5:50533633-50533526 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 554-660
Cow position: chr5:64321499-64321605 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr5:9894376-9894267 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 88

Conread position: 554-663
Cow position: chr5:12316065-12316174 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr5:14314273-14314381 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 554-663
Cow position: chr5:15598483-15598374 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 80

Conread position: 554-663
Cow position: chr5:44796967-44796859 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 554-663
Cow position: chr5:46754478-46754587 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr5:57787128-57787237 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr5:64392905-64393014 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-664
Cow position: chr5:3491952-3492062 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-666
Cow position: chr5:34528312-34528424 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 80

Conread position: 554-667
Cow position: chr5:4551883-4551995 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr5:6045037-6045151 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 554-667
Cow position: chr5:6528431-6528544 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr5:12149297-12149409 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr5:14550835-14550722 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr5:17087279-17087165 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 99
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr5:19969281-19969168 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr5:30816466-30816579 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr5:31640178-31640291 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr5:34915893-34916005 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr5:37942042-37941929 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 80

Conread position: 554-667
Cow position: chr5:45845942-45845832 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 85, 10

Conread position: 554-667
Cow position: chr5:46510117-46510003 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr5:47756519-47756632 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr5:47871299-47871187 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 554-667
Cow position: chr5:55942646-55942534 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 554-667
Cow position: chr5:56523925-56524035 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr5:56568979-56569091 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-667
Cow position: chr5:59298208-59298095 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr5:60015672-60015783 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr5:60947969-60948081 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 554-667
Cow position: chr5:63840395-63840282 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr5:64139314-64139426 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr5:64524131-64524017 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 64

Conread position: 554-667
Cow position: chr5:66257393-66257505 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 554-667
Cow position: chr5:66338835-66338946 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 554-669
Cow position: chr5:19470432-19470321 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 554-669
Cow position: chr5:24348862-24348977 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr5:28330581-28330466 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr5:41936048-41935933 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr5:3281582-3281699 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 103
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 86, 80

Conread position: 554-671
Cow position: chr5:4166421-4166540 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 554-671
Cow position: chr5:13691825-13691707 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 554-671
Cow position: chr5:16508847-16508958 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 554-671
Cow position: chr5:20554998-20554882 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 554-671
Cow position: chr5:27011045-27011161 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 554-671
Cow position: chr5:27403493-27403375 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 104
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 92, 0

Conread position: 554-671
Cow position: chr5:33661605-33661722 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr5:37255605-37255488 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr5:41981152-41981266 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 554-671
Cow position: chr5:47888964-47888847 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 80

Conread position: 554-671
Cow position: chr5:50722801-50722914 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 554-671
Cow position: chr5:52165431-52165315 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 554-671
Cow position: chr5:58793864-58793747 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr5:61600163-61600280 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 102
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr5:62870284-62870169 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 554-671
Cow position: chr5:63917659-63917543 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 554-671
Cow position: chr5:65941502-65941386 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 554-671
Cow position: chr5:72564509-72564629 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 49

Conread position: 554-672
Cow position: chr5:5938075-5938193 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr5:19751605-19751721 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 554-672
Cow position: chr5:26097048-26097164 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr5:26133323-26133205 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr5:26990144-26990266 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 554-672
Cow position: chr5:34506175-34506057 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr5:35145101-35145221 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 554-672
Cow position: chr5:39094304-39094421 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 554-672
Cow position: chr5:42845849-42845732 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 554-672
Cow position: chr5:47317217-47317101 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 554-672
Cow position: chr5:58519648-58519536 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 554-672
Cow position: chr5:62827004-62826885 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 51

Conread position: 554-672
Cow position: chr5:63992413-63992294 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 103
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr5:65933177-65933063 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 555-667
Cow position: chr5:18573922-18574034 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr5:34049861-34049973 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr5:21944133-21944250 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 555-671
Cow position: chr5:32153564-32153448 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr5:38853111-38853227 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr5:45170114-45170230 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr5:50573508-50573624 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr5:50729247-50729363 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr5:63388547-63388662 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 555-672
Cow position: chr5:34638637-34638754 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr5:41523041-41522927 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 555-672
Cow position: chr5:43474599-43474716 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 83, 79

Conread position: 555-672
Cow position: chr5:60715603-60715486 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr5:65601212-65601329 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 556-659
Cow position: chr5:14420592-14420489 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 556-660
Cow position: chr5:45705800-45705904 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 556-665
Cow position: chr5:35826343-35826452 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 556-667
Cow position: chr5:5111324-5111213 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 556-669
Cow position: chr5:24919124-24919011 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position: chr5:4507208-4507093 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 556-672
Cow position: chr5:31469830-31469716 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 556-672
Cow position: chr5:39936856-39936971 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 557-667
Cow position: chr5:47704381-47704270 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 557-671
Cow position: chr5:9090269-9090156 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 558-667
Cow position: chr5:6086807-6086698 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 558-667
Cow position: chr5:41487023-41487132 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 558-671
Cow position: chr5:18702458-18702345 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 558-671
Cow position: chr5:21524919-21525032 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 558-671
Cow position: chr5:43923394-43923282 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 558-671
Cow position: chr5:46323057-46322944 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 558-672
Cow position: chr5:59443496-59443383 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 559-667
Cow position: chr5:61576295-61576403 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 560-667
Cow position: chr5:21828621-21828728 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 560-671
Cow position: chr5:28247933-28248044 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 560-672
Cow position: chr5:40889527-40889415 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 561-661
Cow position: chr5:53835475-53835572 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 561-664
Cow position: chr5:34115420-34115523 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-667
Cow position: chr5:27306076-27306182 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 561-667
Cow position: chr5:28927835-28927729 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 561-667
Cow position: chr5:43929976-43929870 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 561-667
Cow position: chr5:67212136-67212242 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 561-669
Cow position: chr5:35683829-35683937 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 561-669
Cow position: chr5:35684692-35684800 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 561-669
Cow position: chr5:54350603-54350495 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 561-671
Cow position: chr5:54713980-54713869 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 561-671
Cow position: chr5:58005002-58005111 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 561-672
Cow position: chr5:39447774-39447662 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 561-672
Cow position: chr5:58855862-58855972 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 561-672
Cow position: chr5:72310473-72310583 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 562-658
Cow position: chr5:52162358-52162454 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 562-667
Cow position: chr5:42667629-42667526 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 37

Conread position: 562-669
Cow position: chr5:72903465-72903362 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 562-672
Cow position: chr5:57890258-57890368 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 563-671
Cow position: chr5:32975791-32975684 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 563-671
Cow position: chr5:49685521-49685412 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 564-671
Cow position: chr5:32087960-32087853 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 564-671
Cow position: chr5:75437136-75437029 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 69

Conread position: 565-669
Cow position: chr5:41129527-41129631 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 69

Conread position: 565-671
Cow position: chr5:9859956-9859851 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 565-672
Cow position: chr5:61455516-61455623 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 566-672
Cow position: chr5:20127817-20127922 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 570-669
Cow position: chr5:57626576-57626672 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 573-671
Cow position: chr5:41303321-41303223 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 574-672
Cow position: chr5:3771617-3771715 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 58

Conread position: 574-672
Cow position: chr5:36868516-36868614 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 586-672
Cow position: chr5:60183308-60183394 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 380-672
Cow position: chr6:55366741-55366438 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 19

Conread position: 387-496
Cow position: chr6:10332442-10332334 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 402-495
Cow position: chr6:59620318-59620412 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 402-501
Cow position: chr6:24902459-24902360 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-505
Cow position: chr6:37148500-37148603 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 403-498
Cow position: chr6:2894907-2895002 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 410-672
Cow position: chr6:45160680-45160409 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 204

Conread position: 427-663
Cow position: chr6:44194907-44194671 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 83

Conread position: 542-650
Cow position: chr6:40138952-40138844 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 544-672
Cow position: chr6:41375509-41375635 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 6

Conread position: 545-671
Cow position: chr6:61113506-61113632 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 546-660
Cow position: chr6:20098207-20098093 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 547-660
Cow position: chr6:4383252-4383363 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 547-667
Cow position: chr6:2547001-2547118 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 547-669
Cow position: chr6:8637033-8637155 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 547-672
Cow position: chr6:1784014-1783889 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 77

Conread position: 548-663
Cow position: chr6:35471767-35471649 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 549-672
Cow position: chr6:61978421-61978298 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 550-672
Cow position: chr6:55608045-55607923 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 552-672
Cow position: chr6:20231062-20230943 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 554-644
Cow position: chr6:33451732-33451821 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 554-648
Cow position: chr6:20245849-20245943 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-650
Cow position: chr6:62015410-62015506 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-654
Cow position: chr6:8599555-8599656 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-656
Cow position: chr6:16397417-16397315 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 88, 80

Conread position: 554-656
Cow position: chr6:54132583-54132685 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-658
Cow position: chr6:24327370-24327269 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 554-658
Cow position: chr6:60467793-60467894 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-659
Cow position: chr6:31525814-31525918 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 554-659
Cow position: chr6:49398851-49398746 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr6:1002469-1002362 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 29

Conread position: 554-660
Cow position: chr6:13741462-13741566 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 554-660
Cow position: chr6:16700024-16700130 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr6:24781798-24781693 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 85, 45

Conread position: 554-660
Cow position: chr6:35181488-35181382 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr6:36195979-36196085 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr6:50445994-50445892 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr6:51835165-51835271 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr6:1944496-1944600 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 554-663
Cow position: chr6:32916155-32916046 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr6:56842925-56843033 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position: chr6:64449157-64449263 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 72

Conread position: 554-665
Cow position: chr6:11192687-11192575 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 554-666
Cow position: chr6:2012784-2012896 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr6:642812-642699 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr6:6060792-6060679 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr6:7103470-7103358 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 27

Conread position: 554-667
Cow position: chr6:8209823-8209711 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 554-667
Cow position: chr6:8562481-8562594 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr6:12623236-12623346 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 554-667
Cow position: chr6:12927885-12927998 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr6:16492155-16492042 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr6:21311993-21311880 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr6:21587656-21587543 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 80

Conread position: 554-667
Cow position: chr6:23695763-23695875 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr6:39358574-39358463 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 554-667
Cow position: chr6:40713734-40713624 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 31

Conread position: 554-667
Cow position: chr6:42961602-42961489 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr6:53178405-53178515 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr6:59597422-59597535 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr6:60673313-60673424 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 554-667
Cow position: chr6:61515432-61515320 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr6:61575369-61575481 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 554-667
Cow position: chr6:65870789-65870902 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-668
Cow position: chr6:21004421-21004535 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 50, 29

Conread position: 554-669
Cow position: chr6:5095789-5095670 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 554-669
Cow position: chr6:13040217-13040333 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 554-669
Cow position: chr6:14696607-14696492 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr6:607027-607144 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr6:2607378-2607495 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr6:9375609-9375492 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 103
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr6:10176536-10176421 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 554-671
Cow position: chr6:11829931-11830048 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 66

Conread position: 554-671
Cow position: chr6:12500622-12500742 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 554-671
Cow position: chr6:15242601-15242714 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 554-671
Cow position: chr6:19329992-19329872 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 554-671
Cow position: chr6:28482780-28482897 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr6:47540291-47540409 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 554-671
Cow position: chr6:60274458-60274342 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr6:60859541-60859424 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr6:65676022-65676139 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr6:65711592-65711709 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr6:1770430-1770316 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 554-672
Cow position: chr6:3591888-3592006 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr6:3719243-3719123 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 554-672
Cow position: chr6:6343191-6343309 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr6:9733066-9732951 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 554-672
Cow position: chr6:10605450-10605568 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr6:12845082-12845199 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 116, 40

Conread position: 554-672
Cow position: chr6:16410961-16411078 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr6:16706772-16706889 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 84, 80

Conread position: 554-672
Cow position: chr6:16737786-16737903 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 554-672
Cow position: chr6:17068054-17067937 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr6:18987982-18988099 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr6:24652415-24652299 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 14

Conread position: 554-672
Cow position: chr6:27851939-27851822 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr6:29077492-29077612 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 554-672
Cow position: chr6:37634555-37634672 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 554-672
Cow position: chr6:42565451-42565568 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 554-672
Cow position: chr6:48281760-48281879 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 554-672
Cow position: chr6:50120023-50119904 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 554-672
Cow position: chr6:54369134-54369017 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr6:58075990-58076107 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr6:69500095-69500207 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 555-660
Cow position: chr6:12337751-12337855 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 555-660
Cow position: chr6:66363478-66363373 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 79

Conread position: 555-663
Cow position: chr6:8804762-8804654 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 47

Conread position: 555-667
Cow position: chr6:26837620-26837511 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 555-667
Cow position: chr6:38853892-38853780 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 99
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 555-669
Cow position: chr6:21534825-21534939 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 555-669
Cow position: chr6:39994695-39994581 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 6, 10

Conread position: 555-672
Cow position: chr6:14063892-14063777 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 46

Conread position: 555-672
Cow position: chr6:25407630-25407509 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 556-671
Cow position: chr6:40031961-40032071 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 101
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 556-672
Cow position: chr6:53401138-53401253 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 8

Conread position: 556-672
Cow position: chr6:54885146-54885030 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 557-650
Cow position: chr6:61269098-61269191 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 557-654
Cow position: chr6:60017836-60017934 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 557-667
Cow position: chr6:29210270-29210382 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 96, 27

Conread position: 557-671
Cow position: chr6:32024570-32024456 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 558-664
Cow position: chr6:32121680-32121787 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 558-669
Cow position: chr6:52478658-52478547 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 558-672
Cow position: chr6:13688042-13687928 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 560-667
Cow position: chr6:130393-130287 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 560-667
Cow position: chr6:61631848-61631735 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 560-669
Cow position: chr6:5673000-5673109 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 95
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 560-671
Cow position: chr6:40264426-40264315 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 560-672
Cow position: chr6:56502080-56502192 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 561-665
Cow position: chr6:16103430-16103326 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 561-666
Cow position: chr6:6671409-6671514 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-668
Cow position: chr6:65862458-65862565 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 561-671
Cow position: chr6:14201470-14201580 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 561-671
Cow position: chr6:60350527-60350417 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position: chr6:44078294-44078404 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 561-672
Cow position: chr6:50746753-50746863 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 69

Conread position: 561-672
Cow position: chr6:67950731-67950842 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 562-667
Cow position: chr6:51581486-51581379 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 562-669
Cow position: chr6:10106223-10106116 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 562-669
Cow position: chr6:54490967-54490860 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 563-660
Cow position: chr6:7131097-7131000 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 564-663
Cow position: chr6:54140589-54140687 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 564-667
Cow position: chr6:21542095-21542198 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 564-669
Cow position: chr6:51674693-51674798 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 70

Conread position: 564-671
Cow position: chr6:20605709-20605815 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 565-660
Cow position: chr6:51398577-51398672 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 565-663
Cow position: chr6:59302048-59301951 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 565-671
Cow position: chr6:24902365-24902260 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 565-672
Cow position: chr6:388947-389053 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 567-672
Cow position: chr6:9008833-9008728 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 568-667
Cow position: chr6:23248184-23248085 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 568-672
Cow position: chr6:7539352-7539457 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 569-671
Cow position: chr6:7694573-7694473 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 569-672
Cow position: chr6:21110749-21110853 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 570-671
Cow position: chr6:14949700-14949599 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 570-671
Cow position: chr6:36470782-36470681 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 24

Conread position: 570-672
Cow position: chr6:6117768-6117666 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 574-660
Cow position: chr6:53460786-53460701 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 384-497
Cow position: chr7:10373803-10373691 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 387-672
Cow position: chr7:55316856-55316589 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 126, 12

Conread position: 392-536
Cow position: chr7:39939407-39939556 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 402-497
Cow position: chr7:7553651-7553556 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr7:22357808-22357713 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-505
Cow position: chr7:8785647-8785750 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 402-505
Cow position: chr7:11952026-11952129 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 403-667
Cow position: chr7:33719664-33719932 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 64, 86

Conread position: 403-672
Cow position: chr7:28095492-28095771 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 98, 25

Conread position: 408-499
Cow position: chr7:8877563-8877654 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 517-669
Cow position: chr7:50095114-50095262 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 541-660
Cow position: chr7:32260518-32260399 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 545-664
Cow position: chr7:58427855-58427972 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 546-667
Cow position: chr7:13928395-13928274 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 547-667
Cow position: chr7:14766381-14766260 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 549-653
Cow position: chr7:17967354-17967252 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 551-669
Cow position: chr7:32914876-32914993 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 105
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 86, 48

Conread position: 551-672
Cow position: chr7:9146410-9146528 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 552-672
Cow position: chr7:39147562-39147682 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 88, 82

Conread position: 554-652
Cow position: chr7:33697740-33697838 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-653
Cow position: chr7:10760092-10759993 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-655
Cow position: chr7:44039259-44039360 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-656
Cow position: chr7:268763-268863 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 554-658
Cow position: chr7:17950635-17950739 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 84, 80

Conread position: 554-659
Cow position: chr7:9074827-9074932 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr7:15755682-15755577 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr7:29088096-29088200 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 554-659
Cow position: chr7:51072007-51072112 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr7:52378392-52378497 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr7:53361609-53361504 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr7:53988828-53988931 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-660
Cow position: chr7:8785734-8785839 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr7:23457049-23456943 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr7:30307513-30307619 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr7:39988176-39988282 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 95
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 85, 80

Conread position: 554-660
Cow position: chr7:42223179-42223073 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr7:64236522-64236417 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 554-663
Cow position: chr7:23818698-23818807 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr7:26888197-26888088 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr7:64269218-64269110 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 554-665
Cow position: chr7:9193476-9193365 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-665
Cow position: chr7:32819579-32819690 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 97
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr7:1375462-1375574 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr7:8102136-8102249 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr7:8658303-8658416 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr7:9450125-9450012 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr7:10943785-10943673 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 49

Conread position: 554-667
Cow position: chr7:18499035-18498922 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr7:21315876-21315989 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 99
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr7:23568973-23568860 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 85, 80

Conread position: 554-667
Cow position: chr7:23664330-23664217 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr7:35111339-35111452 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr7:35275304-35275197 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 554-667
Cow position: chr7:35893178-35893293 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 554-667
Cow position: chr7:39325510-39325623 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr7:40324652-40324765 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr7:42429636-42429749 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr7:42431592-42431704 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 554-667
Cow position: chr7:48722138-48722025 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr7:51909896-51910013 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 102
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 554-667
Cow position: chr7:59660515-59660630 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 100
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 554-667
Cow position: chr7:60869497-60869610 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr7:65689763-65689650 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr7:4452366-4452482 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 554-669
Cow position: chr7:6057897-6058013 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-669
Cow position: chr7:6270464-6270579 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr7:40693661-40693773 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 554-669
Cow position: chr7:45331312-45331427 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr7:58614562-58614676 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 554-671
Cow position: chr7:8868586-8868704 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 554-671
Cow position: chr7:14632144-14632261 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr7:19912555-19912438 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr7:23679828-23679711 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr7:25083459-25083576 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr7:29474460-29474572 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 45

Conread position: 554-671
Cow position: chr7:32712477-32712360 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr7:33068533-33068416 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr7:33633055-33632939 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 92

Conread position: 554-671
Cow position: chr7:34428328-34428445 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr7:39105580-39105464 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 554-671
Cow position: chr7:39939506-39939621 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 554-671
Cow position: chr7:40709876-40709992 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 554-671
Cow position: chr7:41231650-41231533 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr7:49648130-49648248 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 95

Conread position: 554-671
Cow position: chr7:53034545-53034429 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 92

Conread position: 554-671
Cow position: chr7:53552178-53552061 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr7:57244320-57244205 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 554-671
Cow position: chr7:58302178-58302059 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr7:60245938-60246054 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 49

Conread position: 554-671
Cow position: chr7:63771670-63771786 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 554-672
Cow position: chr7:1721201-1721084 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 554-672
Cow position: chr7:2172524-2172642 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:3728858-3728976 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:5241886-5242003 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr7:8813159-8813041 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:10512945-10512827 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:11176938-11176821 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr7:12384925-12385039 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 554-672
Cow position: chr7:13593542-13593662 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 554-672
Cow position: chr7:13645587-13645469 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:14450122-14450240 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:18388631-18388513 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:19267602-19267484 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:21649870-21649988 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 16

Conread position: 554-672
Cow position: chr7:25393057-25393173 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 554-672
Cow position: chr7:28163417-28163534 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 84, 80

Conread position: 554-672
Cow position: chr7:28563615-28563497 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:30114962-30114846 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr7:32283680-32283798 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:32813487-32813371 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 49

Conread position: 554-672
Cow position: chr7:32824485-32824368 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr7:35300780-35300662 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:35652312-35652195 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr7:36665097-36665216 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 554-672
Cow position: chr7:36717694-36717576 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:37142597-37142479 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:37568795-37568915 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 554-672
Cow position: chr7:37718323-37718439 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr7:40008585-40008703 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:47775636-47775753 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr7:49106435-49106317 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:49942655-49942541 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 554-672
Cow position: chr7:57259263-57259142 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 554-672
Cow position: chr7:58170508-58170626 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:59691840-59691958 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:63085329-63085447 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr7:66894773-66894655 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 555-659
Cow position: chr7:32711212-32711108 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 555-660
Cow position: chr7:23099268-23099164 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 555-660
Cow position: chr7:26632043-26631938 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-660
Cow position: chr7:28584015-28584122 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 555-660
Cow position: chr7:39042372-39042478 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 555-660
Cow position: chr7:39518069-39518174 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 555-660
Cow position: chr7:54857132-54857238 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 94
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 555-663
Cow position: chr7:28090009-28090116 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 95
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 555-667
Cow position: chr7:12659230-12659117 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 555-667
Cow position: chr7:14076502-14076390 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr7:23276503-23276392 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 555-669
Cow position: chr7:57537757-57537642 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 555-671
Cow position: chr7:5052997-5052881 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr7:11160233-11160117 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr7:21573054-21573166 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 555-671
Cow position: chr7:29302587-29302471 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 107, 6

Conread position: 555-671
Cow position: chr7:40571036-40571152 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 83, 79

Conread position: 555-672
Cow position: chr7:21240340-21240224 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 555-672
Cow position: chr7:24778343-24778227 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 555-672
Cow position: chr7:26911669-26911551 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 555-672
Cow position: chr7:28324403-28324520 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr7:34004136-34004252 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 555-672
Cow position: chr7:56820803-56820686 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr7:62394783-62394900 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 556-660
Cow position: chr7:26896058-26896162 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 556-661
Cow position: chr7:45927385-45927281 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 556-663
Cow position: chr7:34422492-34422386 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 95
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 51, 43

Conread position: 556-663
Cow position: chr7:54089974-54090079 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 82, 43

Conread position: 556-667
Cow position: chr7:46116883-46116771 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 556-669
Cow position: chr7:35779219-35779330 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 556-669
Cow position: chr7:47932026-47931913 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position: chr7:21526636-21526521 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position: chr7:23646372-23646487 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 104
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position: chr7:60120781-60120896 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 556-672
Cow position: chr7:58967044-58967160 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 557-667
Cow position: chr7:39161482-39161592 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 557-669
Cow position: chr7:62793553-62793666 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 557-670
Cow position: chr7:39154878-39154991 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 557-671
Cow position: chr7:11161016-11161130 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 557-671
Cow position: chr7:39169672-39169786 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 557-672
Cow position: chr7:19798162-19798047 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 82, 77

Conread position: 558-660
Cow position: chr7:43710991-43711092 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 558-669
Cow position: chr7:32693279-32693168 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 559-660
Cow position: chr7:40566846-40566947 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 560-667
Cow position: chr7:39415678-39415785 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 94
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 560-667
Cow position: chr7:40894294-40894401 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 560-667
Cow position: chr7:63749706-63749598 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 560-671
Cow position: chr7:13985541-13985428 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 561-660
Cow position: chr7:36996152-36996251 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 89
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 561-664
Cow position: chr7:64573286-64573183 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 561-669
Cow position: chr7:20827841-20827733 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 561-671
Cow position: chr7:13219615-13219506 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 78, 38

Conread position: 561-671
Cow position: chr7:15608185-15608294 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 561-671
Cow position: chr7:60153210-60153323 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 561-672
Cow position: chr7:24213655-24213765 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 561-672
Cow position: chr7:45658610-45658501 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 562-663
Cow position: chr7:34568975-34569076 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 72

Conread position: 562-667
Cow position: chr7:10449008-10448904 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 562-669
Cow position: chr7:29346161-29346054 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 562-671
Cow position: chr7:25023682-25023576 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 562-671
Cow position: chr7:64102633-64102525 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 562-672
Cow position: chr7:25867730-25867620 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 564-660
Cow position: chr7:60748963-60749058 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 564-667
Cow position: chr7:1269837-1269733 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 564-671
Cow position: chr7:6706074-6706181 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 564-672
Cow position: chr7:12408464-12408354 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 565-671
Cow position: chr7:45592818-45592922 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 566-672
Cow position: chr7:32791473-32791579 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 568-671
Cow position: chr7:14005652-14005755 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 66

Conread position: 569-672
Cow position: chr7:1558518-1558621 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 570-671
Cow position: chr7:12212823-12212722 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 570-671
Cow position: chr7:51674110-51674009 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 574-672
Cow position: chr7:48406713-48406615 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 577-660
Cow position: chr7:17782882-17782799 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 74
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 377-501
Cow position: chr8:47550310-47550188 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 384-501
Cow position: chr8:38862063-38861947 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 402-497
Cow position: chr8:27152335-27152240 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-501
Cow position: chr8:43687000-43687098 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 402-511
Cow position: chr8:27681573-27681682 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-532
Cow position: chr8:10699808-10699676 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 402-537
Cow position: chr8:46655675-46655809 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 109, 117

Conread position: 410-672
Cow position: chr8:17180428-17180171 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 194, 99

Conread position: 536-667
Cow position: chr8:24868024-24867897 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 536-672
Cow position: chr8:44437487-44437622 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 69, 19

Conread position: 547-659
Cow position: chr8:22154328-22154216 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 547-669
Cow position: chr8:46952259-46952378 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 547-671
Cow position: chr8:25591547-25591671 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 548-654
Cow position: chr8:32132982-32133089 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 548-664
Cow position: chr8:16938720-16938603 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 549-663
Cow position: chr8:39721396-39721512 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 550-671
Cow position: chr8:35211425-35211302 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 18, 63

Conread position: 551-659
Cow position: chr8:37809894-37809787 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 551-671
Cow position: chr8:38572547-38572426 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 552-664
Cow position: chr8:59250460-59250570 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 552-671
Cow position: chr8:39475173-39475293 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 554-646
Cow position: chr8:36299964-36300056 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-654
Cow position: chr8:28229736-28229636 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-656
Cow position: chr8:19204908-19204805 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 554-657
Cow position: chr8:38780446-38780548 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 554-658
Cow position: chr8:1115056-1114953 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 84, 80

Conread position: 554-658
Cow position: chr8:25455142-25455244 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 554-658
Cow position: chr8:36741363-36741467 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-658
Cow position: chr8:38357114-38357010 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-658
Cow position: chr8:45287591-45287487 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr8:1833900-1833797 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 554-659
Cow position: chr8:6233162-6233057 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 94
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr8:9917628-9917733 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 88, 45

Conread position: 554-660
Cow position: chr8:11606072-11606176 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 554-660
Cow position: chr8:20563096-20563207 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 554-660
Cow position: chr8:20836863-20836969 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr8:27955701-27955595 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 46

Conread position: 554-660
Cow position: chr8:35971583-35971687 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 10

Conread position: 554-660
Cow position: chr8:37090344-37090241 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 554-660
Cow position: chr8:45687934-45687828 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr8:55711125-55711235 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 554-660
Cow position: chr8:57985095-57984989 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr8:673085-673194 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chr8:10337296-10337183 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 554-663
Cow position: chr8:24201639-24201748 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 96
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 40

Conread position: 554-663
Cow position: chr8:55502329-55502440 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 554-667
Cow position: chr8:834101-834215 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 47

Conread position: 554-667
Cow position: chr8:3887095-3887209 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 554-667
Cow position: chr8:5176920-5177033 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 79

Conread position: 554-667
Cow position: chr8:10970563-10970676 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr8:15395119-15395006 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr8:20355025-20354914 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 554-667
Cow position: chr8:21219886-21219999 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr8:25628083-25628197 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 554-667
Cow position: chr8:29262518-29262632 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position: chr8:35966296-35966185 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 554-667
Cow position: chr8:42117539-42117652 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr8:45493617-45493729 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr8:46235438-46235548 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 554-667
Cow position: chr8:47169691-47169803 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chr8:54052043-54052154 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 554-667
Cow position: chr8:61567631-61567518 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-668
Cow position: chr8:26625610-26625724 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr8:2814356-2814470 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 554-669
Cow position: chr8:2865643-2865756 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 554-669
Cow position: chr8:24513402-24513287 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 100
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr8:30245089-30244978 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 554-669
Cow position: chr8:30324063-30324178 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr8:39321061-39321176 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 40

Conread position: 554-669
Cow position: chr8:43986476-43986361 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr8:52229973-52229860 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 554-669
Cow position: chr8:56581463-56581347 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-670
Cow position: chr8:9942789-9942676 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-670
Cow position: chr8:24234868-24234979 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 554-671
Cow position: chr8:2164171-2164054 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr8:3891690-3891573 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr8:6682186-6682069 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 79

Conread position: 554-671
Cow position: chr8:6816936-6816821 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 554-671
Cow position: chr8:9641089-9641206 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr8:10802433-10802316 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr8:29764991-29765108 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr8:32311580-32311696 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 554-671
Cow position: chr8:33814678-33814796 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chr8:36055669-36055552 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr8:36375776-36375660 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 554-671
Cow position: chr8:36606026-36606143 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr8:36648720-36648608 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 554-671
Cow position: chr8:38358161-38358278 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr8:39065947-39066064 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr8:39807211-39807093 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 554-671
Cow position: chr8:47752183-47752066 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 102
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr8:55827828-55827945 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr8:58183573-58183456 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 102
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr8:59642764-59642648 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr8:642821-642703 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr8:1303642-1303759 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr8:1999360-1999475 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 554-672
Cow position: chr8:10081661-10081781 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr8:10699721-10699607 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 554-672
Cow position: chr8:10942999-10942881 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr8:12058449-12058566 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 554-672
Cow position: chr8:18049339-18049456 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 47

Conread position: 554-672
Cow position: chr8:19642206-19642324 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr8:19998346-19998230 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr8:20343217-20343335 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr8:21960986-21961102 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 554-672
Cow position: chr8:24905043-24905162 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 554-672
Cow position: chr8:26651041-26651157 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 554-672
Cow position: chr8:28321711-28321830 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 554-672
Cow position: chr8:31704335-31704453 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 84, 80

Conread position: 554-672
Cow position: chr8:38851623-38851738 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 554-672
Cow position: chr8:42113070-42112948 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 554-672
Cow position: chr8:45245278-45245165 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 554-672
Cow position: chr8:47342470-47342588 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr8:50708783-50708902 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 554-672
Cow position: chr8:50735103-50735219 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 56

Conread position: 554-672
Cow position: chr8:54195275-54195394 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 554-672
Cow position: chr8:55716491-55716609 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr8:58875812-58875930 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr8:60488892-60488772 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 29

Conread position: 555-660
Cow position: chr8:47550199-47550094 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 555-660
Cow position: chr8:48437664-48437558 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 555-667
Cow position: chr8:3704359-3704471 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr8:9517444-9517332 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chr8:16972793-16972683 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 555-668
Cow position: chr8:20339022-20339135 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 555-669
Cow position: chr8:8916419-8916305 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr8:16297022-16296906 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr8:22183308-22183425 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 555-671
Cow position: chr8:36059577-36059693 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr8:46799566-46799450 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chr8:49720871-49720987 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 57

Conread position: 555-672
Cow position: chr8:21827011-21826896 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 555-672
Cow position: chr8:31775920-31776037 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 102
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr8:47665170-47665052 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 555-672
Cow position: chr8:53383143-53383258 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 556-663
Cow position: chr8:24471385-24471494 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 556-663
Cow position: chr8:48513269-48513163 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 93
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 556-667
Cow position: chr8:12814577-12814690 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 99
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 556-667
Cow position: chr8:53320714-53320825 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position: chr8:844198-844090 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 556-671
Cow position: chr8:45071112-45071227 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 556-672
Cow position: chr8:20355416-20355299 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 556-672
Cow position: chr8:35828067-35827953 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 557-651
Cow position: chr8:43227735-43227829 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 557-653
Cow position: chr8:13922171-13922268 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 558-663
Cow position: chr8:6076801-6076696 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 558-667
Cow position: chr8:39630512-39630619 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 96
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 558-667
Cow position: chr8:59477763-59477871 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 558-668
Cow position: chr8:23111334-23111224 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 558-671
Cow position: chr8:47461604-47461717 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 558-672
Cow position: chr8:54572386-54572497 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 80, 46

Conread position: 559-667
Cow position: chr8:44000747-44000640 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 560-671
Cow position: chr8:60746386-60746495 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 561-667
Cow position: chr8:44450141-44450038 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 561-669
Cow position: chr8:56886070-56886174 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 561-672
Cow position: chr8:4940566-4940456 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 561-672
Cow position: chr8:12795558-12795668 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 561-672
Cow position: chr8:20212764-20212655 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 562-663
Cow position: chr8:55925942-55926043 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 562-667
Cow position: chr8:48775559-48775664 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 562-667
Cow position: chr8:53642679-53642574 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-671
Cow position: chr8:4563684-4563575 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 564-671
Cow position: chr8:5485134-5485028 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 564-671
Cow position: chr8:37571962-37571856 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 62

Conread position: 564-671
Cow position: chr8:49940716-49940609 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 564-672
Cow position: chr8:17103673-17103566 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 568-672
Cow position: chr8:53485456-53485560 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 569-667
Cow position: chr8:57045748-57045650 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 570-671
Cow position: chr8:47328095-47328196 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 572-667
Cow position: chr8:32988499-32988594 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chr9:34696905-34697000 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-503
Cow position: chr9:22318729-22318628 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-511
Cow position: chr9:20393737-20393848 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 402-524
Cow position: chr9:42445582-42445701 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 408-505
Cow position: chr9:5594885-5594788 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 408-516
Cow position: chr9:26057067-26057176 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 104

Conread position: 409-669
Cow position: chr9:20321672-20321927 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 100, 89

Conread position: 547-672
Cow position: chr9:50080735-50080860 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 548-660
Cow position: chr9:26065109-26065221 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 548-660
Cow position: chr9:45285221-45285333 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 548-667
Cow position: chr9:6952400-6952281 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 62

Conread position: 548-671
Cow position: chr9:5226855-5226977 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 106
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 550-663
Cow position: chr9:37943087-37942976 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 550-671
Cow position: chr9:9723575-9723693 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 49

Conread position: 550-671
Cow position: chr9:19539405-19539284 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 552-667
Cow position: chr9:19743282-19743172 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 552-672
Cow position: chr9:7410088-7409968 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 104
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 554-648
Cow position: chr9:52739596-52739689 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 554-656
Cow position: chr9:16218339-16218441 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-658
Cow position: chr9:48809819-48809715 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr9:13186423-13186527 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 554-659
Cow position: chr9:18002645-18002750 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chr9:20848240-20848135 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr9:9199481-9199586 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr9:9516467-9516572 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position: chr9:23388372-23388480 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-660
Cow position: chr9:30402116-30402222 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 80

Conread position: 554-660
Cow position: chr9:36623148-36623254 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr9:50976942-50977048 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chr9:57951026-57951131 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 554-661
Cow position: chr9:16086565-16086456 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 554-661
Cow position: chr9:28739975-28739867 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 94
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 554-663
Cow position: chr9:5433935-5433830 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 554-663
Cow position: chr9:22227781-22227891 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 554-663
Cow position: chr9:34957748-34957856 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position: chr9:53602716-53602608 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 554-663
Cow position: chr9:55074831-55074940 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 34

Conread position: 554-663
Cow position: chr9:61997292-61997400 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 554-664
Cow position: chr9:21840379-21840268 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 554-664
Cow position: chr9:59197686-59197796 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-665
Cow position: chr9:8868831-8868943 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 554-667
Cow position: chr9:2398328-2398441 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr9:5218876-5218988 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 47

Conread position: 554-667
Cow position: chr9:5510028-5509915 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr9:6933768-6933879 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 554-667
Cow position: chr9:20810760-20810870 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 554-667
Cow position: chr9:22361316-22361206 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 554-667
Cow position: chr9:22456369-22456256 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr9:29006864-29006752 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 554-667
Cow position: chr9:46316484-46316597 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr9:52407474-52407361 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chr9:64091991-64091879 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 554-668
Cow position: chr9:29841193-29841077 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 554-669
Cow position: chr9:21030621-21030505 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 554-669
Cow position: chr9:22318642-22318527 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr9:26434760-26434878 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 554-669
Cow position: chr9:28747218-28747333 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr9:28773421-28773306 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chr9:59386476-59386588 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 17, 48

Conread position: 554-670
Cow position: chr9:58439478-58439593 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr9:1855583-1855467 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr9:3807433-3807550 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr9:5268860-5268743 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr9:5393354-5393238 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 554-671
Cow position: chr9:9090185-9090071 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 554-671
Cow position: chr9:13994492-13994375 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr9:14974622-14974739 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr9:15805617-15805734 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 83

Conread position: 554-671
Cow position: chr9:18252623-18252736 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 554-671
Cow position: chr9:26404093-26403976 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 102
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr9:30664475-30664591 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 554-671
Cow position: chr9:31662773-31662657 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 554-671
Cow position: chr9:34696992-34697108 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 102
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chr9:38184174-38184291 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr9:45756660-45756547 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 554-671
Cow position: chr9:49982793-49982910 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr9:52505000-52505116 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 554-671
Cow position: chr9:52689320-52689437 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chr9:54528819-54528702 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr9:5246152-5246035 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr9:5501153-5501037 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 31

Conread position: 554-672
Cow position: chr9:20416206-20416323 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 52

Conread position: 554-672
Cow position: chr9:21459851-21459972 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 554-672
Cow position: chr9:22151784-22151901 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr9:24726374-24726492 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr9:27697425-27697544 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr9:29184830-29184947 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr9:33100838-33100954 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chr9:36445925-36445809 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 554-672
Cow position: chr9:37017188-37017070 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr9:38344199-38344079 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chr9:48017519-48017637 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chr9:49544757-49544874 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 554-672
Cow position: chr9:52484617-52484731 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 554-672
Cow position: chr9:54681805-54681688 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 554-672
Cow position: chr9:57896823-57896941 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 84, 16

Conread position: 555-660
Cow position: chr9:25969649-25969543 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 555-667
Cow position: chr9:27345134-27345247 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 555-667
Cow position: chr9:31077375-31077487 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 83, 79

Conread position: 555-667
Cow position: chr9:31640015-31640127 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 39

Conread position: 555-671
Cow position: chr9:37510320-37510208 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 555-671
Cow position: chr9:54666208-54666094 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 555-672
Cow position: chr9:5319932-5319815 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr9:31347256-31347140 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 555-672
Cow position: chr9:35904448-35904565 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr9:42498132-42498015 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chr9:43871275-43871159 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 107, 91

Conread position: 556-653
Cow position: chr9:16811010-16811107 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 556-656
Cow position: chr9:11299395-11299494 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 556-660
Cow position: chr9:10308705-10308810 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 556-660
Cow position: chr9:18139993-18140096 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 556-667
Cow position: chr9:19542210-19542100 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 556-667
Cow position: chr9:22114331-22114442 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 556-667
Cow position: chr9:54177943-54178058 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 556-667
Cow position: chr9:63746106-63745995 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position: chr9:32812648-32812535 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 556-672
Cow position: chr9:8418074-8418189 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 82, 68

Conread position: 556-672
Cow position: chr9:18381162-18381045 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 557-669
Cow position: chr9:38961136-38961249 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 557-671
Cow position: chr9:25964523-25964637 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 557-671
Cow position: chr9:29338731-29338847 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 558-659
Cow position: chr9:22443312-22443412 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 558-660
Cow position: chr9:32371460-32371563 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 558-671
Cow position: chr9:1846711-1846824 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 74

Conread position: 558-671
Cow position: chr9:5763330-5763443 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 99
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 558-671
Cow position: chr9:15982778-15982891 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 54

Conread position: 559-667
Cow position: chr9:4928928-4928822 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 41

Conread position: 559-672
Cow position: chr9:35101166-35101053 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 560-663
Cow position: chr9:50076363-50076261 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 561-660
Cow position: chr9:55084000-55084099 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 561-663
Cow position: chr9:36999764-36999866 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 561-667
Cow position: chr9:33697359-33697465 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-671
Cow position: chr9:15215384-15215494 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 561-671
Cow position: chr9:35533655-35533764 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 561-672
Cow position: chr9:648072-647962 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 562-671
Cow position: chr9:30138423-30138313 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 39

Conread position: 562-671
Cow position: chr9:62357235-62357344 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 562-672
Cow position: chr9:36353986-36354096 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 564-655
Cow position: chr9:5621736-5621827 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 82
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 564-656
Cow position: chr9:6089391-6089299 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 564-663
Cow position: chr9:37528750-37528651 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 566-672
Cow position: chr9:20989162-20989268 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 568-671
Cow position: chr9:54997733-54997836 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 570-672
Cow position: chr9:3070135-3070237 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 68, 64

Conread position: 574-667
Cow position: chr9:24997232-24997323 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 576-667
Cow position: chr9:56453615-56453523 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 387-536
Cow position: chrX:40452561-40452411 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 116, 11

Conread position: 402-497
Cow position: chrX:6543921-6544016 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chrX:18695256-18695161 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chrX:22115617-22115522 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position: chrX:27705258-27705353 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-505
Cow position: chrX:42221903-42221800 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-508
Cow position: chrX:37572829-37572937 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 402-533
Cow position: chrX:4123500-4123632 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 402-536
Cow position: chrX:22812727-22812864 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 402-659
Cow position: chrX:9417088-9416836 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 105, 0

Conread position: 402-667
Cow position: chrX:38641861-38642122 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 107, 63

Conread position: 403-501
Cow position: chrX:40544944-40544846 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 403-672
Cow position: chrX:41167364-41167095 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 154, 93

Conread position: 408-505
Cow position: chrX:18999569-18999666 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 410-511
Cow position: chrX:40269149-40269252 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 412-671
Cow position: chrX:48578020-48578284 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 172
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 59

Conread position: 537-672
Cow position: chrX:28878427-28878288 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 543-671
Cow position: chrX:41673844-41673973 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 12

Conread position: 547-660
Cow position: chrX:25816151-25816038 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 547-660
Cow position: chrX:45967907-45968021 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 547-672
Cow position: chrX:32743283-32743408 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 87

Conread position: 548-659
Cow position: chrX:3653509-3653620 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 548-660
Cow position: chrX:46771226-46771112 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 550-667
Cow position: chrX:17725726-17725839 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 550-669
Cow position: chrX:45955929-45956047 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 550-671
Cow position: chrX:1810413-1810294 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 550-672
Cow position: chrX:35268638-35268757 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 105
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 552-667
Cow position: chrX:3654354-3654469 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 81

Conread position: 552-672
Cow position: chrX:20887894-20887776 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 552-672
Cow position: chrX:43527253-43527373 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-649
Cow position: chrX:28157237-28157332 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-656
Cow position: chrX:13648032-13647930 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position: chrX:20151602-20151707 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chrX:10916506-10916611 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 554-660
Cow position: chrX:12096495-12096390 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 40

Conread position: 554-660
Cow position: chrX:15485876-15485769 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 554-660
Cow position: chrX:20697854-20697749 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 16

Conread position: 554-660
Cow position: chrX:21064038-21064142 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 554-660
Cow position: chrX:33205240-33205134 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chrX:34401749-34401856 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 554-660
Cow position: chrX:37843472-37843578 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chrX:42507895-42507789 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position: chrX:44054554-44054659 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 554-662
Cow position: chrX:9997581-9997474 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position: chrX:151653-151761 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 554-663
Cow position: chrX:2351814-2351923 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position: chrX:19689970-19690078 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position: chrX:31373326-31373433 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position: chrX:32871034-32870926 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 554-664
Cow position: chrX:6544008-6544119 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 554-665
Cow position: chrX:878619-878510 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-666
Cow position: chrX:47344046-47344158 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chrX:1616299-1616183 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 554-667
Cow position: chrX:2523978-2523865 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chrX:5856571-5856462 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 554-667
Cow position: chrX:9651293-9651181 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 554-667
Cow position: chrX:14884212-14884097 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 554-667
Cow position: chrX:15596790-15596902 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chrX:19188688-19188801 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 79

Conread position: 554-667
Cow position: chrX:20340139-20340027 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 554-667
Cow position: chrX:20582782-20582895 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chrX:22482937-22482824 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chrX:23583310-23583423 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chrX:29289328-29289441 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chrX:34754440-34754327 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chrX:35224054-35224163 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 554-667
Cow position: chrX:35388155-35388041 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 554-667
Cow position: chrX:35609738-35609851 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chrX:37232161-37232274 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chrX:38007016-38006903 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 81

Conread position: 554-667
Cow position: chrX:38094773-38094662 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 554-667
Cow position: chrX:38439225-38439339 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 81

Conread position: 554-667
Cow position: chrX:40269228-40269349 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 554-667
Cow position: chrX:42086614-42086726 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 554-667
Cow position: chrX:42171547-42171435 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position: chrX:45787406-45787519 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position: chrX:48536914-48536801 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 57

Conread position: 554-668
Cow position: chrX:616654-616540 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chrX:17497848-17497963 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position: chrX:25283392-25283279 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 554-669
Cow position: chrX:35413382-35413499 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 554-669
Cow position: chrX:38227338-38227224 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 554-669
Cow position: chrX:40557924-40557810 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 104, 0

Conread position: 554-669
Cow position: chrX:42470185-42470070 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-670
Cow position: chrX:22812814-22812928 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 554-670
Cow position: chrX:45410290-45410174 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chrX:126544-126661 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chrX:7351051-7351164 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 554-671
Cow position: chrX:7718605-7718723 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chrX:12018027-12018141 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 554-671
Cow position: chrX:15545649-15545760 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chrX:23564045-23563928 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chrX:29723203-29723317 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-671
Cow position: chrX:31250144-31250258 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 554-671
Cow position: chrX:31489264-31489380 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 554-671
Cow position: chrX:31949179-31949062 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 102
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chrX:34502672-34502787 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 554-671
Cow position: chrX:37836338-37836456 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 54, 80

Conread position: 554-671
Cow position: chrX:40183598-40183481 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chrX:40452461-40452344 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chrX:41238611-41238497 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position: chrX:42855160-42855277 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position: chrX:42874730-42874846 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position: chrX:42994366-42994481 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 554-671
Cow position: chrX:45412904-45412786 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 554-672
Cow position: chrX:917618-917502 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 46

Conread position: 554-672
Cow position: chrX:4123587-4123705 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chrX:4269316-4269197 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 554-672
Cow position: chrX:7382075-7382193 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chrX:10866115-10865996 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 40

Conread position: 554-672
Cow position: chrX:11844489-11844377 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 554-672
Cow position: chrX:13868446-13868563 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chrX:14924752-14924869 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 554-672
Cow position: chrX:16531751-16531867 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 554-672
Cow position: chrX:18695169-18695050 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 81

Conread position: 554-672
Cow position: chrX:23497911-23497795 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 554-672
Cow position: chrX:24105378-24105496 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chrX:27446440-27446558 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chrX:27509268-27509150 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chrX:27516285-27516402 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 554-672
Cow position: chrX:28847127-28847009 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chrX:28866240-28866126 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 554-672
Cow position: chrX:32020370-32020252 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position: chrX:33020238-33020355 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chrX:38963861-38963976 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position: chrX:39556065-39555946 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 554-672
Cow position: chrX:40647730-40647847 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position: chrX:41879179-41879064 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 47

Conread position: 554-672
Cow position: chrX:45414548-45414430 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 555-660
Cow position: chrX:27432166-27432061 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position: chrX:8797001-8797112 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 98
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 0

Conread position: 555-667
Cow position: chrX:10412233-10412124 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 555-667
Cow position: chrX:23061207-23061317 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 83, 39

Conread position: 555-667
Cow position: chrX:35041972-35042084 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 555-669
Cow position: chrX:26883381-26883267 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 76

Conread position: 555-671
Cow position: chrX:8899777-8899893 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chrX:26441027-26440911 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position: chrX:46722988-46722872 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position: chrX:13912832-13912950 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 555-672
Cow position: chrX:15147433-15147318 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 555-672
Cow position: chrX:31443068-31442952 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 102
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 555-672
Cow position: chrX:34441697-34441582 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 555-672
Cow position: chrX:47247156-47247039 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 556-660
Cow position: chrX:25237932-25238034 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 556-663
Cow position: chrX:2467634-2467740 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 556-665
Cow position: chrX:11581688-11581801 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 556-671
Cow position: chrX:5872067-5872182 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position: chrX:21593037-21593152 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 101
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position: chrX:32747412-32747529 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 556-671
Cow position: chrX:48370850-48370966 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 556-672
Cow position: chrX:4633098-4632982 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 107

Conread position: 556-672
Cow position: chrX:21795250-21795365 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 556-672
Cow position: chrX:31436234-31436352 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 557-660
Cow position: chrX:38967405-38967508 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 557-667
Cow position: chrX:19015197-19015305 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 557-667
Cow position: chrX:32978501-32978392 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 557-672
Cow position: chrX:33803258-33803143 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 77

Conread position: 558-667
Cow position: chrX:11655842-11655953 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 558-671
Cow position: chrX:12309633-12309520 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 41

Conread position: 558-671
Cow position: chrX:25035631-25035519 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 41

Conread position: 558-672
Cow position: chrX:38577289-38577402 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 558-672
Cow position: chrX:41743669-41743782 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 559-667
Cow position: chrX:678811-678703 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 559-668
Cow position: chrX:12290493-12290601 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 560-671
Cow position: chrX:47232595-47232706 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 561-660
Cow position: chrX:9635422-9635323 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 561-667
Cow position: chrX:7710932-7710827 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 561-667
Cow position: chrX:27176561-27176455 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-671
Cow position: chrX:8558704-8558594 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 562-667
Cow position: chrX:619248-619143 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 562-667
Cow position: chrX:7508897-7509003 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 73

Conread position: 562-667
Cow position: chrX:33855473-33855368 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 562-671
Cow position: chrX:33519377-33519486 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 562-671
Cow position: chrX:47243519-47243409 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 562-672
Cow position: chrX:26625917-26625807 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 562-672
Cow position: chrX:27394254-27394144 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 562-672
Cow position: chrX:34543547-34543656 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 563-667
Cow position: chrX:9360644-9360747 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 563-670
Cow position: chrX:8492997-8492890 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 564-672
Cow position: chrX:17794747-17794855 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 564-672
Cow position: chrX:42492748-42492645 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 74, 21

Conread position: 565-667
Cow position: chrX:17662834-17662732 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 565-667
Cow position: chrX:42247420-42247319 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 566-671
Cow position: chrX:46532745-46532641 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 73, 33

Conread position: 568-660
Cow position: chrX:30963106-30963014 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 568-672
Cow position: chrX:11856195-11856298 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 569-672
Cow position: chrX:42339169-42339066 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 570-671
Cow position: chrX:38549216-38549317 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 570-672
Cow position: chrX:36975717-36975819 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 570-672
Cow position: chrX:39558580-39558477 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 574-667
Cow position: chrX:35542663-35542756 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 574-667
Cow position: chrX:42381328-42381235 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 574-672
Cow position: chrX:13265848-13265750 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 576-671
Cow position: chrX:7721758-7721853 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 579-669
Cow position: chrX:6488363-6488453 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 82
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 55

Conread position: 581-672
Cow position: chrX:23091660-23091751 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0