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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8019M10.3
        

               
Conread position:
               
660-877
               

               
Cow position:
               
chr10:9045744-9045524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
660-888
               

               
Cow position:
               
chr10:65689580-65689347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 201
               

               
Conread position:
               
669-884
               

               
Cow position:
               
chr10:58086816-58086600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
670-818
               

               
Cow position:
               
chr10:49659274-49659422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 122
               

               
Conread position:
               
670-884
               

               
Cow position:
               
chr10:53654827-53655042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
35, 122
               

               
Conread position:
               
671-865
               

               
Cow position:
               
chr10:23447000-23447196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
34, 121
               

               
Conread position:
               
671-877
               

               
Cow position:
               
chr10:24863774-24863985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
671-880
               

               
Cow position:
               
chr10:33965220-33965428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
671-884
               

               
Cow position:
               
chr10:52099594-52099384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr10:7880347-7880572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 127
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr10:14291235-14291458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
19, 123
               

               
Conread position:
               
673-888
               

               
Cow position:
               
chr10:50046292-50046511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 186
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr10:12158695-12158908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 107
               

               
Conread position:
               
677-888
               

               
Cow position:
               
chr10:55376451-55376236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 122
               

               
Conread position:
               
678-886
               

               
Cow position:
               
chr10:10514986-10515197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
681-815
               

               
Cow position:
               
chr10:7935956-7935821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 117
               

               
Conread position:
               
682-858
               

               
Cow position:
               
chr10:24668584-24668410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
12, 109
               

               
Conread position:
               
691-888
               

               
Cow position:
               
chr10:31754203-31754009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 98
               

               
Conread position:
               
691-888
               

               
Cow position:
               
chr10:51103264-51103072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
696-888
               

               
Cow position:
               
chr10:14335719-14335910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 97
               

               
Conread position:
               
698-881
               

               
Cow position:
               
chr10:24154895-24155084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 108
               

               
Conread position:
               
728-888
               

               
Cow position:
               
chr10:35476649-35476811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 63
               

               
Conread position:
               
660-888
               

               
Cow position:
               
chr11:74117455-74117683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
667-884
               

               
Cow position:
               
chr11:82116130-82116350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 192
               

               
Conread position:
               
667-888
               

               
Cow position:
               
chr11:63918771-63918995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
38, 132
               

               
Conread position:
               
669-864
               

               
Cow position:
               
chr11:76244215-76244019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 57
               

               
Conread position:
               
669-888
               

               
Cow position:
               
chr11:72982917-72982694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 111
               

               
Conread position:
               
671-853
               

               
Cow position:
               
chr11:16358502-16358321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 121
               

               
Conread position:
               
671-880
               

               
Cow position:
               
chr11:8727046-8727249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
671-884
               

               
Cow position:
               
chr11:64093238-64093457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
671-887
               

               
Cow position:
               
chr11:38734538-38734756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 128
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr11:34634657-34634865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr11:48970294-48970081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr11:50871052-50871269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr11:82327334-82327556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
675-888
               

               
Cow position:
               
chr11:41474999-41474784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
678-880
               

               
Cow position:
               
chr11:84408943-84409146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
678-884
               

               
Cow position:
               
chr11:26656645-26656436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
25, 123
               

               
Conread position:
               
678-888
               

               
Cow position:
               
chr11:41097444-41097650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
678-888
               

               
Cow position:
               
chr11:53700683-53700893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
679-874
               

               
Cow position:
               
chr11:78361466-78361659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 113
               

               
Conread position:
               
679-878
               

               
Cow position:
               
chr11:8111829-8112030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
679-888
               

               
Cow position:
               
chr11:54437639-54437853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 113
               

               
Conread position:
               
679-888
               

               
Cow position:
               
chr11:55286848-55287055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
680-888
               

               
Cow position:
               
chr11:35222837-35222629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
688-888
               

               
Cow position:
               
chr11:73893544-73893745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
689-884
               

               
Cow position:
               
chr11:28787876-28787679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
690-862
               

               
Cow position:
               
chr11:4755799-4755969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
691-888
               

               
Cow position:
               
chr11:7929659-7929461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 101
               

               
Conread position:
               
695-877
               

               
Cow position:
               
chr11:52036602-52036420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
13, 89
               

               
Conread position:
               
703-888
               

               
Cow position:
               
chr11:11681050-11681236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 147
               

               
Conread position:
               
703-888
               

               
Cow position:
               
chr11:47380610-47380424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 93
               

               
Conread position:
               
703-888
               

               
Cow position:
               
chr11:48661942-48661757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
703-888
               

               
Cow position:
               
chr11:74241326-74241515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
116, 174
               

               
Conread position:
               
706-884
               

               
Cow position:
               
chr11:62657053-62656876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
710-888
               

               
Cow position:
               
chr11:50727096-50727280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
74, 146
               

               
Conread position:
               
655-845
               

               
Cow position:
               
chr12:40445365-40445177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
660-845
               

               
Cow position:
               
chr12:37798043-37797857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
660-888
               

               
Cow position:
               
chr12:11089715-11089492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
131, 9
               

               
Conread position:
               
663-876
               

               
Cow position:
               
chr12:13622324-13622117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 44
               

               
Conread position:
               
667-888
               

               
Cow position:
               
chr12:18002810-18003030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
669-808
               

               
Cow position:
               
chr12:28259259-28259402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 132
               

               
Conread position:
               
669-875
               

               
Cow position:
               
chr12:35360706-35360499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
669-881
               

               
Cow position:
               
chr12:8479267-8479484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
669-888
               

               
Cow position:
               
chr12:11052901-11053124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
671-834
               

               
Cow position:
               
chr12:11928121-11928282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
671-839
               

               
Cow position:
               
chr12:14745285-14745452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr12:40284485-40284265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
34, 122
               

               
Conread position:
               
674-794
               

               
Cow position:
               
chr12:37769501-37769622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
674-817
               

               
Cow position:
               
chr12:17421825-17421682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr12:22130394-22130607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
144, 35
               

               
Conread position:
               
679-837
               

               
Cow position:
               
chr12:34435782-34435622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 113
               

               
Conread position:
               
679-853
               

               
Cow position:
               
chr12:40180501-40180678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 119
               

               
Conread position:
               
725-888
               

               
Cow position:
               
chr12:31028862-31029023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
659-888
               

               
Cow position:
               
chr13:34795098-34794853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
24, 138
               

               
Conread position:
               
660-888
               

               
Cow position:
               
chr13:59123109-59123348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
40, 141
               

               
Conread position:
               
668-858
               

               
Cow position:
               
chr13:43580558-43580365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 125
               

               
Conread position:
               
669-875
               

               
Cow position:
               
chr13:20817793-20818001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
670-829
               

               
Cow position:
               
chr13:14933099-14932935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
670-888
               

               
Cow position:
               
chr13:32802846-32803062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
671-829
               

               
Cow position:
               
chr13:59455041-59454884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
671-884
               

               
Cow position:
               
chr13:53121501-53121716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
31, 122
               

               
Conread position:
               
674-872
               

               
Cow position:
               
chr13:22114634-22114821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
674-881
               

               
Cow position:
               
chr13:24153562-24153760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
674-887
               

               
Cow position:
               
chr13:17706004-17706220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
680-884
               

               
Cow position:
               
chr13:20664678-20664475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 25
               

               
Conread position:
               
691-870
               

               
Cow position:
               
chr13:22089479-22089303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
691-884
               

               
Cow position:
               
chr13:31513302-31513106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 82
               

               
Conread position:
               
692-888
               

               
Cow position:
               
chr13:3119805-3120002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 100
               

               
Conread position:
               
700-882
               

               
Cow position:
               
chr13:48354555-48354375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
671-858
               

               
Cow position:
               
chr14:19183935-19183746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
48, 120
               

               
Conread position:
               
671-884
               

               
Cow position:
               
chr14:2293787-2293575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
34, 126
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr14:33184463-33184247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 113
               

               
Conread position:
               
675-877
               

               
Cow position:
               
chr14:35062161-35062364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 117
               

               
Conread position:
               
681-871
               

               
Cow position:
               
chr14:45397567-45397376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
688-881
               

               
Cow position:
               
chr14:37797555-37797749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 108
               

               
Conread position:
               
691-853
               

               
Cow position:
               
chr14:25655177-25655343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 156
               

               
Conread position:
               
704-888
               

               
Cow position:
               
chr14:43790925-43790739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 89
               

               
Conread position:
               
660-881
               

               
Cow position:
               
chr15:13870823-13870604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
667-888
               

               
Cow position:
               
chr15:40111021-40110798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
38, 167
               

               
Conread position:
               
671-881
               

               
Cow position:
               
chr15:5041396-5041191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
35, 111
               

               
Conread position:
               
671-881
               

               
Cow position:
               
chr15:46549769-46549971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
674-881
               

               
Cow position:
               
chr15:37934364-37934155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
31, 124
               

               
Conread position:
               
678-877
               

               
Cow position:
               
chr15:39554867-39555067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
678-884
               

               
Cow position:
               
chr15:30623870-30624076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
680-884
               

               
Cow position:
               
chr15:39420657-39420449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
25, 112
               

               
Conread position:
               
685-888
               

               
Cow position:
               
chr15:9115749-9115949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
688-872
               

               
Cow position:
               
chr15:20154218-20154404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
17, 104
               

               
Conread position:
               
688-888
               

               
Cow position:
               
chr15:19785991-19785789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 104
               

               
Conread position:
               
691-888
               

               
Cow position:
               
chr15:13943186-13943381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
691-888
               

               
Cow position:
               
chr15:47059973-47060167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
700-884
               

               
Cow position:
               
chr15:21968315-21968136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
703-888
               

               
Cow position:
               
chr15:7068779-7068592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 94
               

               
Conread position:
               
703-888
               

               
Cow position:
               
chr15:30051236-30051052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
706-888
               

               
Cow position:
               
chr15:26850538-26850355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
714-881
               

               
Cow position:
               
chr15:24606525-24606693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
106, 160
               

               
Conread position:
               
662-886
               

               
Cow position:
               
chr16:24759921-24759701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
668-886
               

               
Cow position:
               
chr16:46439954-46440170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
669-825
               

               
Cow position:
               
chr16:41531638-41531479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
41, 124
               

               
Conread position:
               
670-848
               

               
Cow position:
               
chr16:27586287-27586464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
35, 122
               

               
Conread position:
               
671-829
               

               
Cow position:
               
chr16:46693705-46693862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
32, 121
               

               
Conread position:
               
671-838
               

               
Cow position:
               
chr16:20281913-20282080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
671-845
               

               
Cow position:
               
chr16:22824261-22824437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
671-880
               

               
Cow position:
               
chr16:45305648-45305861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 129
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr16:14363306-14363085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
13, 189
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr16:17295087-17294868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
34, 121
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr16:38527132-38527353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 151
               

               
Conread position:
               
674-881
               

               
Cow position:
               
chr16:21695624-21695419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
13, 108
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr16:22375641-22375852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr16:29357160-29357375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
675-888
               

               
Cow position:
               
chr16:16714825-16715043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 127
               

               
Conread position:
               
678-888
               

               
Cow position:
               
chr16:37421224-37421437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 119
               

               
Conread position:
               
678-888
               

               
Cow position:
               
chr16:41201895-41202102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
679-884
               

               
Cow position:
               
chr16:15993299-15993089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
27, 119
               

               
Conread position:
               
682-888
               

               
Cow position:
               
chr16:3089581-3089784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
17, 102
               

               
Conread position:
               
688-884
               

               
Cow position:
               
chr16:34211697-34211501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 169
               

               
Conread position:
               
688-888
               

               
Cow position:
               
chr16:11080806-11080604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 160
               

               
Conread position:
               
688-888
               

               
Cow position:
               
chr16:15945538-15945740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
17, 105
               

               
Conread position:
               
705-877
               

               
Cow position:
               
chr16:48448082-48448256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 87
               

               
Conread position:
               
707-884
               

               
Cow position:
               
chr16:17873760-17873937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
709-888
               

               
Cow position:
               
chr16:10625214-10625402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 88
               

               
Conread position:
               
718-884
               

               
Cow position:
               
chr16:16140130-16140296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
97, 73
               

               
Conread position:
               
659-888
               

               
Cow position:
               
chr17:30142757-30142989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
661-858
               

               
Cow position:
               
chr17:29561699-29561501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
671-837
               

               
Cow position:
               
chr17:29636639-29636808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 122
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr17:29830505-29830287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
34, 126
               

               
Conread position:
               
674-852
               

               
Cow position:
               
chr17:14659892-14659707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 126
               

               
Conread position:
               
674-877
               

               
Cow position:
               
chr17:30752888-30753096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr17:43468090-43467876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
678-884
               

               
Cow position:
               
chr17:7814346-7814143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 113
               

               
Conread position:
               
678-888
               

               
Cow position:
               
chr17:21215470-21215679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
25, 97
               

               
Conread position:
               
680-877
               

               
Cow position:
               
chr17:39445403-39445609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
705-888
               

               
Cow position:
               
chr17:18628356-18628170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 92
               

               
Conread position:
               
710-888
               

               
Cow position:
               
chr17:30795154-30794977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
106, 81
               

               
Conread position:
               
657-888
               

               
Cow position:
               
chr18:48530960-48530731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
660-888
               

               
Cow position:
               
chr18:18483432-18483666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
660-888
               

               
Cow position:
               
chr18:18713535-18713306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
44, 133
               

               
Conread position:
               
662-888
               

               
Cow position:
               
chr18:37175954-37176178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
669-863
               

               
Cow position:
               
chr18:8102899-8103092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 124
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr18:46019174-46019399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 126
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr18:36378598-36378810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 119
               

               
Conread position:
               
675-888
               

               
Cow position:
               
chr18:16793878-16793669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 119
               

               
Conread position:
               
675-888
               

               
Cow position:
               
chr18:24006899-24006694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
179, 29
               

               
Conread position:
               
678-872
               

               
Cow position:
               
chr18:15885137-15884940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
28, 114
               

               
Conread position:
               
678-881
               

               
Cow position:
               
chr18:3326510-3326302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
678-888
               

               
Cow position:
               
chr18:31323268-31323053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
679-888
               

               
Cow position:
               
chr18:54695430-54695218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
681-888
               

               
Cow position:
               
chr18:32427764-32427978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 117
               

               
Conread position:
               
691-852
               

               
Cow position:
               
chr18:44113574-44113411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
14, 101
               

               
Conread position:
               
700-888
               

               
Cow position:
               
chr18:31984081-31983892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 151
               

               
Conread position:
               
716-888
               

               
Cow position:
               
chr18:24831978-24831805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 63
               

               
Conread position:
               
651-888
               

               
Cow position:
               
chr19:45724796-45724555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
54, 143
               

               
Conread position:
               
660-880
               

               
Cow position:
               
chr19:17463659-17463869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
669-860
               

               
Cow position:
               
chr19:46840658-46840852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
35, 124
               

               
Conread position:
               
669-876
               

               
Cow position:
               
chr19:18008965-18008759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
669-888
               

               
Cow position:
               
chr19:4446891-4446672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
669-888
               

               
Cow position:
               
chr19:4775725-4775511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
167, 31
               

               
Conread position:
               
670-884
               

               
Cow position:
               
chr19:13793103-13792886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
671-812
               

               
Cow position:
               
chr19:51643561-51643703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
671-837
               

               
Cow position:
               
chr19:5991014-5991182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
671-884
               

               
Cow position:
               
chr19:5481802-5482017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 123
               

               
Conread position:
               
671-884
               

               
Cow position:
               
chr19:45005854-45006068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 125
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr19:16135502-16135719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
143, 116
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr19:30207467-30207261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr19:52861885-52862098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
674-886
               

               
Cow position:
               
chr19:21144297-21144080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 118
               

               
Conread position:
               
676-815
               

               
Cow position:
               
chr19:15006353-15006493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
29, 114
               

               
Conread position:
               
679-881
               

               
Cow position:
               
chr19:21343227-21343016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
26, 120
               

               
Conread position:
               
681-888
               

               
Cow position:
               
chr19:34693378-34693168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
34, 120
               

               
Conread position:
               
682-839
               

               
Cow position:
               
chr19:47279842-47279688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
682-888
               

               
Cow position:
               
chr19:29215654-29215449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
23, 110
               

               
Conread position:
               
683-888
               

               
Cow position:
               
chr19:47013020-47013216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
688-888
               

               
Cow position:
               
chr19:36706656-36706856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 5
               

               
Conread position:
               
692-848
               

               
Cow position:
               
chr19:43483702-43483542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
692-887
               

               
Cow position:
               
chr19:43708197-43708390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 76
               

               
Conread position:
               
700-888
               

               
Cow position:
               
chr19:16096995-16097181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
703-888
               

               
Cow position:
               
chr19:4594331-4594145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
16, 146
               

               
Conread position:
               
705-886
               

               
Cow position:
               
chr19:46900092-46899914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
706-881
               

               
Cow position:
               
chr19:37179503-37179331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
656-888
               

               
Cow position:
               
chr20:12358418-12358651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 137
               

               
Conread position:
               
670-864
               

               
Cow position:
               
chr20:23113406-23113210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
670-888
               

               
Cow position:
               
chr20:33659750-33659527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 176
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr20:22912912-22913124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
674-831
               

               
Cow position:
               
chr20:12300189-12300347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr20:3160458-3160243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
675-884
               

               
Cow position:
               
chr20:3798497-3798704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
691-888
               

               
Cow position:
               
chr20:22953273-22953477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 101
               

               
Conread position:
               
651-884
               

               
Cow position:
               
chr21:788422-788648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
658-888
               

               
Cow position:
               
chr21:3605527-3605307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
664-884
               

               
Cow position:
               
chr21:20547997-20547771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
667-846
               

               
Cow position:
               
chr21:13664264-13664445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 125
               

               
Conread position:
               
669-826
               

               
Cow position:
               
chr21:22006034-22005876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
669-829
               

               
Cow position:
               
chr21:9399528-9399368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
669-870
               

               
Cow position:
               
chr21:47930595-47930394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 124
               

               
Conread position:
               
669-888
               

               
Cow position:
               
chr21:23827067-23827289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 114
               

               
Conread position:
               
670-881
               

               
Cow position:
               
chr21:47253962-47253754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
145, 29
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr21:4469259-4469038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr21:6964329-6964112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
35, 119
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr21:22370374-22370598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 111
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr21:23190345-23190124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 121
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr21:31707250-31707031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
34, 134
               

               
Conread position:
               
674-876
               

               
Cow position:
               
chr21:353729-353928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
675-875
               

               
Cow position:
               
chr21:26146137-26145935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
140, 116
               

               
Conread position:
               
678-884
               

               
Cow position:
               
chr21:31758940-31758729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 119
               

               
Conread position:
               
684-881
               

               
Cow position:
               
chr21:29634763-29634566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
9, 88
               

               
Conread position:
               
686-871
               

               
Cow position:
               
chr21:24144984-24144799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 111
               

               
Conread position:
               
688-877
               

               
Cow position:
               
chr21:47332335-47332147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
688-880
               

               
Cow position:
               
chr21:48314458-48314647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
690-888
               

               
Cow position:
               
chr21:14726401-14726194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
706-888
               

               
Cow position:
               
chr21:18052152-18052335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
139, 85
               

               
Conread position:
               
710-888
               

               
Cow position:
               
chr21:77712-77891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 81
               

               
Conread position:
               
651-888
               

               
Cow position:
               
chr22:8901987-8901754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 17
               

               
Conread position:
               
669-827
               

               
Cow position:
               
chr22:29513790-29513950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 124
               

               
Conread position:
               
669-881
               

               
Cow position:
               
chr22:17597158-17596942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
669-888
               

               
Cow position:
               
chr22:39219376-39219593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 113
               

               
Conread position:
               
669-888
               

               
Cow position:
               
chr22:44642915-44642705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
670-818
               

               
Cow position:
               
chr22:21571405-21571255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 129
               

               
Conread position:
               
670-845
               

               
Cow position:
               
chr22:12094045-12094223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
670-852
               

               
Cow position:
               
chr22:30288788-30288604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 118
               

               
Conread position:
               
670-888
               

               
Cow position:
               
chr22:29616843-29616624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr22:7237818-7238038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 132
               

               
Conread position:
               
674-829
               

               
Cow position:
               
chr22:7600720-7600563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
674-886
               

               
Cow position:
               
chr22:39739305-39739095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
143, 18
               

               
Conread position:
               
675-888
               

               
Cow position:
               
chr22:34149690-34149907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 124
               

               
Conread position:
               
677-888
               

               
Cow position:
               
chr22:33762439-33762227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
679-888
               

               
Cow position:
               
chr22:39890425-39890634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 114
               

               
Conread position:
               
692-877
               

               
Cow position:
               
chr22:44633611-44633801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 155
               

               
Conread position:
               
703-881
               

               
Cow position:
               
chr22:40820793-40820974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 90
               

               
Conread position:
               
710-880
               

               
Cow position:
               
chr22:33588035-33587863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
653-887
               

               
Cow position:
               
chr23:566827-567060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
52, 16
               

               
Conread position:
               
657-882
               

               
Cow position:
               
chr23:2252877-2252652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
669-888
               

               
Cow position:
               
chr23:9014255-9014475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
669-888
               

               
Cow position:
               
chr23:10961280-10961065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 125
               

               
Conread position:
               
670-865
               

               
Cow position:
               
chr23:29440575-29440768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 122
               

               
Conread position:
               
671-856
               

               
Cow position:
               
chr23:10953070-10952886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 121
               

               
Conread position:
               
671-877
               

               
Cow position:
               
chr23:11170328-11170531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr23:39063134-39062919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
31, 178
               

               
Conread position:
               
677-861
               

               
Cow position:
               
chr23:20530812-20530626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 106
               

               
Conread position:
               
678-877
               

               
Cow position:
               
chr23:18943060-18943253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
40, 46
               

               
Conread position:
               
659-888
               

               
Cow position:
               
chr24:44553036-44552805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
666-881
               

               
Cow position:
               
chr24:26713030-26713250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
39, 8
               

               
Conread position:
               
669-882
               

               
Cow position:
               
chr24:26772539-26772760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
36, 124
               

               
Conread position:
               
669-885
               

               
Cow position:
               
chr24:38698769-38698549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
36, 89
               

               
Conread position:
               
669-887
               

               
Cow position:
               
chr24:23192225-23192005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 184
               

               
Conread position:
               
670-881
               

               
Cow position:
               
chr24:39116360-39116579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
671-842
               

               
Cow position:
               
chr24:3542675-3542505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 121
               

               
Conread position:
               
674-851
               

               
Cow position:
               
chr24:26650894-26651074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
31, 169
               

               
Conread position:
               
674-884
               

               
Cow position:
               
chr24:27886147-27886363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr24:26776266-26776472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 70
               

               
Conread position:
               
675-845
               

               
Cow position:
               
chr24:25977769-25977941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
677-887
               

               
Cow position:
               
chr24:37429986-37429777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 120
               

               
Conread position:
               
679-888
               

               
Cow position:
               
chr24:34427307-34427097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 65
               

               
Conread position:
               
689-877
               

               
Cow position:
               
chr24:44512116-44511926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
690-888
               

               
Cow position:
               
chr24:32227554-32227353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
710-884
               

               
Cow position:
               
chr24:5891404-5891579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
105, 81
               

               
Conread position:
               
667-857
               

               
Cow position:
               
chr25:22259953-22259773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
667-884
               

               
Cow position:
               
chr25:30600917-30601142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 131
               

               
Conread position:
               
670-829
               

               
Cow position:
               
chr25:18547524-18547686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
670-887
               

               
Cow position:
               
chr25:13038784-13038565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
33, 172
               

               
Conread position:
               
671-853
               

               
Cow position:
               
chr25:33554345-33554529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 127
               

               
Conread position:
               
671-878
               

               
Cow position:
               
chr25:36798017-36798222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
674-817
               

               
Cow position:
               
chr25:3418217-3418359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
674-884
               

               
Cow position:
               
chr25:13832194-13831988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr25:6951498-6951713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
675-887
               

               
Cow position:
               
chr25:15937355-15937566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 117
               

               
Conread position:
               
678-881
               

               
Cow position:
               
chr25:9937188-9937393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
23, 117
               

               
Conread position:
               
689-888
               

               
Cow position:
               
chr25:30665663-30665863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
690-869
               

               
Cow position:
               
chr25:9480300-9480118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
15, 110
               

               
Conread position:
               
655-881
               

               
Cow position:
               
chr26:15337479-15337250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 141
               

               
Conread position:
               
669-824
               

               
Cow position:
               
chr26:17673878-17674032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 5
               

               
Conread position:
               
669-884
               

               
Cow position:
               
chr26:24543203-24543422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 123
               

               
Conread position:
               
669-888
               

               
Cow position:
               
chr26:10332577-10332362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
670-880
               

               
Cow position:
               
chr26:4608992-4608784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
145, 18
               

               
Conread position:
               
671-843
               

               
Cow position:
               
chr26:11154185-11154018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
680-871
               

               
Cow position:
               
chr26:8441501-8441693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
691-877
               

               
Cow position:
               
chr26:13831856-13832044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 172
               

               
Conread position:
               
691-888
               

               
Cow position:
               
chr26:15352470-15352267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
693-887
               

               
Cow position:
               
chr26:15549905-15550103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 159
               

               
Conread position:
               
694-888
               

               
Cow position:
               
chr26:13850198-13850395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
664-888
               

               
Cow position:
               
chr27:15509610-15509380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
41, 127
               

               
Conread position:
               
674-887
               

               
Cow position:
               
chr27:15760981-15761194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 119
               

               
Conread position:
               
678-888
               

               
Cow position:
               
chr27:14870614-14870396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
649-877
               

               
Cow position:
               
chr28:9126046-9126266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
660-881
               

               
Cow position:
               
chr28:34574221-34574003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 111
               

               
Conread position:
               
661-877
               

               
Cow position:
               
chr28:4825969-4826181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
667-852
               

               
Cow position:
               
chr28:25138821-25139005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
669-877
               

               
Cow position:
               
chr28:33722406-33722617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
35, 131
               

               
Conread position:
               
669-884
               

               
Cow position:
               
chr28:3025551-3025765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
669-888
               

               
Cow position:
               
chr28:10227673-10227892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
669-888
               

               
Cow position:
               
chr28:27679504-27679280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 170
               

               
Conread position:
               
671-813
               

               
Cow position:
               
chr28:34657308-34657449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chr28:27160289-27160501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
144, 34
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr28:13177596-13177815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 95
               

               
Conread position:
               
678-888
               

               
Cow position:
               
chr28:19360112-19360329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 185
               

               
Conread position:
               
679-876
               

               
Cow position:
               
chr28:24305827-24306027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
679-888
               

               
Cow position:
               
chr28:25256976-25256769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 112
               

               
Conread position:
               
683-884
               

               
Cow position:
               
chr28:19190425-19190219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
685-877
               

               
Cow position:
               
chr28:3842713-3842518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 169
               

               
Conread position:
               
703-881
               

               
Cow position:
               
chr28:20148149-20147967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 90
               

               
Conread position:
               
707-888
               

               
Cow position:
               
chr28:34663087-34663271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
652-888
               

               
Cow position:
               
chr29:33577178-33577412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
669-880
               

               
Cow position:
               
chr29:33584136-33584348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 129
               

               
Conread position:
               
675-852
               

               
Cow position:
               
chr29:41365774-41365954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 123
               

               
Conread position:
               
675-874
               

               
Cow position:
               
chr29:37306910-37307112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
30, 146
               

               
Conread position:
               
675-875
               

               
Cow position:
               
chr29:19596140-19596341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
675-887
               

               
Cow position:
               
chr29:34449933-34450144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
678-884
               

               
Cow position:
               
chr29:18266725-18266519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
688-881
               

               
Cow position:
               
chr29:39576473-39576658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
694-888
               

               
Cow position:
               
chr29:31960607-31960413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
695-880
               

               
Cow position:
               
chr29:25699179-25698996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 102
               

               
Conread position:
               
695-884
               

               
Cow position:
               
chr29:11601352-11601538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 144
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr8:61514712-61515057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 142
               

               
Conread position:
               
647-888
               

               
Cow position:
               
chr8:37330075-37329832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
660-888
               

               
Cow position:
               
chr8:28293086-28293310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
55, 133
               

               
Conread position:
               
669-877
               

               
Cow position:
               
chr8:11442609-11442817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 45
               

               
Conread position:
               
669-888
               

               
Cow position:
               
chr8:51978799-51978579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
669-888
               

               
Cow position:
               
chr8:60436758-60436539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
670-888
               

               
Cow position:
               
chr8:44848645-44848420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 134
               

               
Conread position:
               
670-888
               

               
Cow position:
               
chr8:47644499-47644284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
33, 28
               

               
Conread position:
               
671-845
               

               
Cow position:
               
chr8:38415013-38414841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
671-877
               

               
Cow position:
               
chr8:35275486-35275280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
671-881
               

               
Cow position:
               
chr8:40157010-40157214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
674-826
               

               
Cow position:
               
chr8:38277407-38277256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
31, 134
               

               
Conread position:
               
674-853
               

               
Cow position:
               
chr8:22684910-22685091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 124
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr8:61585066-61585284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
31, 85
               

               
Conread position:
               
675-853
               

               
Cow position:
               
chr8:37547423-37547604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
675-879
               

               
Cow position:
               
chr8:38460234-38460025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 118
               

               
Conread position:
               
691-877
               

               
Cow position:
               
chr8:1817981-1817793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
695-888
               

               
Cow position:
               
chr8:39647558-39647756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
698-877
               

               
Cow position:
               
chr8:20634097-20634277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
117, 93
               

               
Conread position:
               
704-888
               

               
Cow position:
               
chr8:52059275-52059090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
706-888
               

               
Cow position:
               
chr8:29143981-29144156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 92
               

               
Conread position:
               
654-829
               

               
Cow position:
               
chr9:22935448-22935270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
660-888
               

               
Cow position:
               
chr9:34214711-34214932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
664-884
               

               
Cow position:
               
chr9:23429324-23429109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
669-881
               

               
Cow position:
               
chr9:52775454-52775239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
39, 140
               

               
Conread position:
               
669-884
               

               
Cow position:
               
chr9:35229376-35229593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 124
               

               
Conread position:
               
670-884
               

               
Cow position:
               
chr9:22841275-22841492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 133
               

               
Conread position:
               
671-829
               

               
Cow position:
               
chr9:38419802-38419649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
674-887
               

               
Cow position:
               
chr9:5692881-5692662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 122
               

               
Conread position:
               
674-888
               

               
Cow position:
               
chr9:20330477-20330261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
675-888
               

               
Cow position:
               
chr9:58488132-58488347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
677-888
               

               
Cow position:
               
chr9:47900784-47900993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
678-888
               

               
Cow position:
               
chr9:22588568-22588782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
678-888
               

               
Cow position:
               
chr9:58456282-58456485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
691-888
               

               
Cow position:
               
chr9:21895476-21895674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
659-888
               

               
Cow position:
               
chrX:33837732-33837508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
665-877
               

               
Cow position:
               
chrX:39769930-39769714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
667-881
               

               
Cow position:
               
chrX:12101899-12102109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 126
               

               
Conread position:
               
669-845
               

               
Cow position:
               
chrX:18405315-18405493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
671-815
               

               
Cow position:
               
chrX:22278285-22278431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
32, 130
               

               
Conread position:
               
671-875
               

               
Cow position:
               
chrX:14316666-14316462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 26
               

               
Conread position:
               
671-884
               

               
Cow position:
               
chrX:31259913-31260122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
33, 126
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chrX:14297196-14297411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
671-888
               

               
Cow position:
               
chrX:39187217-39187431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 121
               

               
Conread position:
               
675-815
               

               
Cow position:
               
chrX:16352721-16352861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 117
               

               
Conread position:
               
675-867
               

               
Cow position:
               
chrX:23927029-23927221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
675-887
               

               
Cow position:
               
chrX:17281848-17282063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
675-888
               

               
Cow position:
               
chrX:5507818-5507606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
675-888
               

               
Cow position:
               
chrX:29024589-29024378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
678-824
               

               
Cow position:
               
chrX:5565696-5565846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
678-877
               

               
Cow position:
               
chrX:18828488-18828291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
678-888
               

               
Cow position:
               
chrX:32803385-32803595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
679-881
               

               
Cow position:
               
chrX:20541763-20541558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
99, 8
               

               
Conread position:
               
679-888
               

               
Cow position:
               
chrX:3930170-3929963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 91
               

               
Conread position:
               
688-888
               

               
Cow position:
               
chrX:26610375-26610172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
17, 171
               

               
Conread position:
               
688-888
               

               
Cow position:
               
chrX:37906121-37905918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
691-854
               

               
Cow position:
               
chrX:14605086-14604922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
691-886
               

               
Cow position:
               
chrX:29315836-29315635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 105
               

               
Conread position:
               
693-843
               

               
Cow position:
               
chrX:37411903-37411750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
705-877
               

               
Cow position:
               
chrX:39855303-39855128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
16, 87
               

               
Conread position:
               
730-888
               

               
Cow position:
               
chrX:37454246-37454091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
50, 0