Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8022G13.3 |
| Conread position: | 10-396 |
| Cow position: | chr1:51445094-51445484 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 113 |
| Conread position: | 18-273 |
| Cow position: | chr1:96658360-96658109 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 107 |
| Conread position: | 19-137 |
| Cow position: | chr1:42182736-42182616 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 19-143 |
| Cow position: | chr1:81234329-81234206 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-173 |
| Cow position: | chr1:100819558-100819711 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 19-396 |
| Cow position: | chr1:67884540-67884887 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 104 |
| Conread position: | 19-410 |
| Cow position: | chr1:89002182-89002553 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 366, 103 |
| Conread position: | 20-132 |
| Cow position: | chr1:98246769-98246658 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 20-400 |
| Cow position: | chr1:7834084-7834436 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 21-362 |
| Cow position: | chr1:92260206-92259852 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 102 |
| Conread position: | 30-383 |
| Cow position: | chr1:3970663-3970321 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 35 |
| Conread position: | 33-228 |
| Cow position: | chr1:63997340-63997535 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 113, 85 |
| Conread position: | 41-403 |
| Cow position: | chr1:89489751-89490104 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 44-328 |
| Cow position: | chr1:656421-656139 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 9 |
| Conread position: | 118-396 |
| Cow position: | chr1:101893082-101893353 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 146-375 |
| Cow position: | chr1:5216156-5215930 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 146-383 |
| Cow position: | chr1:101661486-101661256 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 218, 108 |
| Conread position: | 152-381 |
| Cow position: | chr1:78131292-78131523 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 210, 128 |
| Conread position: | 161-381 |
| Cow position: | chr1:15218696-15218482 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 200, 71 |
| Conread position: | 169-396 |
| Cow position: | chr1:100819962-100820184 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 86 |
| Conread position: | 215-367 |
| Cow position: | chr1:81234168-81234020 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 242-396 |
| Cow position: | chr1:15313253-15313107 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 242-396 |
| Cow position: | chr1:89496217-89496367 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 250-398 |
| Cow position: | chr1:98080656-98080510 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 67, 118 |
| Conread position: | 261-396 |
| Cow position: | chr1:96658093-96657962 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 117, 35 |
| Conread position: | 18-141 |
| Cow position: | chr10:36316150-36316028 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 19-140 |
| Cow position: | chr10:33459696-33459815 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 19-306 |
| Cow position: | chr10:8993956-8993683 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 19-383 |
| Cow position: | chr10:66712802-66713169 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 103 |
| Conread position: | 19-399 |
| Cow position: | chr10:18848812-18848446 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 104 |
| Conread position: | 23-253 |
| Cow position: | chr10:68038721-68038941 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 48-397 |
| Cow position: | chr10:23217029-23217362 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 146-383 |
| Cow position: | chr10:68118993-68118749 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 73, 97 |
| Conread position: | 146-404 |
| Cow position: | chr10:28394148-28394401 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 109 |
| Conread position: | 151-363 |
| Cow position: | chr10:13065192-13065400 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 170-383 |
| Cow position: | chr10:29099836-29100048 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 194, 78 |
| Conread position: | 209-365 |
| Cow position: | chr10:58053282-58053436 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 215-396 |
| Cow position: | chr10:17507063-17506897 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 10-398 |
| Cow position: | chr11:12876775-12877154 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 19-239 |
| Cow position: | chr11:37006039-37005827 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-354 |
| Cow position: | chr11:73440448-73440772 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 19-357 |
| Cow position: | chr11:4645181-4645516 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 19-365 |
| Cow position: | chr11:32019085-32018733 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 98 |
| Conread position: | 19-394 |
| Cow position: | chr11:81966440-81966071 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 19-394 |
| Cow position: | chr11:82291978-82291600 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 103 |
| Conread position: | 19-396 |
| Cow position: | chr11:37059983-37059599 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 88 |
| Conread position: | 20-383 |
| Cow position: | chr11:52509125-52508759 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 86, 120 |
| Conread position: | 20-396 |
| Cow position: | chr11:37003634-37003282 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 104 |
| Conread position: | 131-396 |
| Cow position: | chr11:7402698-7402960 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 134 |
| Conread position: | 182-363 |
| Cow position: | chr11:38050522-38050698 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 19-137 |
| Cow position: | chr12:5573312-5573428 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 19-223 |
| Cow position: | chr12:16845864-16846059 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 159, 99 |
| Conread position: | 19-392 |
| Cow position: | chr12:29442293-29441928 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 46 |
| Conread position: | 19-400 |
| Cow position: | chr12:4354652-4355014 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 22 |
| Conread position: | 19-405 |
| Cow position: | chr12:25381743-25382128 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 105 |
| Conread position: | 20-396 |
| Cow position: | chr12:22131201-22131558 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 102 |
| Conread position: | 21-359 |
| Cow position: | chr12:18051214-18050900 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 22-399 |
| Cow position: | chr12:7978475-7978119 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 41 |
| Conread position: | 229-393 |
| Cow position: | chr12:18540246-18540089 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 10-399 |
| Cow position: | chr13:41117138-41117531 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 73 |
| Conread position: | 19-135 |
| Cow position: | chr13:10386865-10386750 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 19-162 |
| Cow position: | chr13:38487129-38487271 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-398 |
| Cow position: | chr13:18546463-18546103 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 21-365 |
| Cow position: | chr13:8926212-8925871 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 43 |
| Conread position: | 21-411 |
| Cow position: | chr13:6646637-6646252 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 102 |
| Conread position: | 22-134 |
| Cow position: | chr13:50639842-50639731 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 107-396 |
| Cow position: | chr13:38495965-38495685 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 143 |
| Conread position: | 147-375 |
| Cow position: | chr13:16568798-16568574 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 156-383 |
| Cow position: | chr13:24259812-24259588 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 207, 37 |
| Conread position: | 166-365 |
| Cow position: | chr13:38487297-38487487 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 181-313 |
| Cow position: | chr13:6641663-6641534 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 183-390 |
| Cow position: | chr13:54685237-54685039 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 10-365 |
| Cow position: | chr14:37779939-37780291 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 38 |
| Conread position: | 10-365 |
| Cow position: | chr14:37782426-37782778 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 38 |
| Conread position: | 19-251 |
| Cow position: | chr14:44493216-44493450 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 141, 99 |
| Conread position: | 19-397 |
| Cow position: | chr14:7948135-7947772 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 56 |
| Conread position: | 20-369 |
| Cow position: | chr14:49004589-49004237 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 93, 241 |
| Conread position: | 26-402 |
| Cow position: | chr14:19146696-19147060 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 128-365 |
| Cow position: | chr14:8696950-8696724 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 240-411 |
| Cow position: | chr14:44493662-44493826 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 143, 15 |
| Conread position: | 19-140 |
| Cow position: | chr15:7865339-7865219 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-141 |
| Cow position: | chr15:29929364-29929485 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-152 |
| Cow position: | chr15:42240446-42240579 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 51, 100 |
| Conread position: | 19-267 |
| Cow position: | chr15:38114583-38114830 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 103 |
| Conread position: | 19-293 |
| Cow position: | chr15:53152091-53152359 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 19-355 |
| Cow position: | chr15:25432102-25431776 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 99 |
| Conread position: | 19-396 |
| Cow position: | chr15:22909682-22910030 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 19-396 |
| Cow position: | chr15:39919856-39919502 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 19-396 |
| Cow position: | chr15:53159858-53160225 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 99 |
| Conread position: | 19-397 |
| Cow position: | chr15:36847288-36846918 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 45 |
| Conread position: | 20-137 |
| Cow position: | chr15:50276147-50276031 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 141-302 |
| Cow position: | chr15:42241649-42241807 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 146-318 |
| Cow position: | chr15:38863482-38863651 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 47 |
| Conread position: | 146-363 |
| Cow position: | chr15:10316019-10316232 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 25, 30 |
| Conread position: | 154-359 |
| Cow position: | chr15:15209125-15208923 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 255-396 |
| Cow position: | chr15:38115034-38115170 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 10-363 |
| Cow position: | chr16:49166222-49165866 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 112 |
| Conread position: | 19-137 |
| Cow position: | chr16:33694086-33693969 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-144 |
| Cow position: | chr16:6531764-6531888 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-336 |
| Cow position: | chr16:9826586-9826290 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 19-396 |
| Cow position: | chr16:35230988-35231344 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 54 |
| Conread position: | 19-396 |
| Cow position: | chr16:45728658-45728294 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 19-396 |
| Cow position: | chr16:47993291-47992937 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 99 |
| Conread position: | 19-396 |
| Cow position: | chr16:49210225-49209865 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 40 |
| Conread position: | 31-195 |
| Cow position: | chr16:30687296-30687133 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 66-255 |
| Cow position: | chr16:16329597-16329776 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 80-365 |
| Cow position: | chr16:40822925-40822647 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 80-396 |
| Cow position: | chr16:23956820-23957148 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 42 |
| Conread position: | 86-403 |
| Cow position: | chr16:21599277-21598986 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 146-361 |
| Cow position: | chr16:27162261-27162056 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 146-380 |
| Cow position: | chr16:11107926-11107694 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 85, 32 |
| Conread position: | 146-383 |
| Cow position: | chr16:4864017-4864253 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 218, 108 |
| Conread position: | 146-394 |
| Cow position: | chr16:33689359-33689589 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 207-369 |
| Cow position: | chr16:30686977-30686818 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 209-350 |
| Cow position: | chr16:13523941-13523803 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 209-400 |
| Cow position: | chr16:56877908-56878093 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 188, 46 |
| Conread position: | 10-394 |
| Cow position: | chr17:8171148-8170774 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 19-395 |
| Cow position: | chr17:35602276-35601906 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 103 |
| Conread position: | 20-136 |
| Cow position: | chr17:25492175-25492059 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 99 |
| Conread position: | 20-172 |
| Cow position: | chr17:21455379-21455529 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 21-399 |
| Cow position: | chr17:9170451-9170808 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 21 |
| Conread position: | 166-407 |
| Cow position: | chr17:27727176-27727409 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 88 |
| Conread position: | 173-294 |
| Cow position: | chr17:21455821-21455936 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 179-396 |
| Cow position: | chr17:3273975-3273765 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 10-141 |
| Cow position: | chr18:35039998-35039868 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 19-137 |
| Cow position: | chr18:47801220-47801337 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 19-168 |
| Cow position: | chr18:24652969-24652820 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 65, 104 |
| Conread position: | 19-263 |
| Cow position: | chr18:12026114-12025870 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 108 |
| Conread position: | 19-289 |
| Cow position: | chr18:48663775-48663520 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 54, 101 |
| Conread position: | 19-363 |
| Cow position: | chr18:46853051-46853385 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 99 |
| Conread position: | 19-394 |
| Cow position: | chr18:1389254-1388881 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 184 |
| Conread position: | 21-136 |
| Cow position: | chr18:48387618-48387732 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 21-140 |
| Cow position: | chr18:4468299-4468417 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 146-383 |
| Cow position: | chr18:52704981-52705221 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 218, 107 |
| Conread position: | 156-383 |
| Cow position: | chr18:5012078-5012302 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 56 |
| Conread position: | 19-137 |
| Cow position: | chr19:10604669-10604552 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-140 |
| Cow position: | chr19:22463480-22463600 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-235 |
| Cow position: | chr19:53614664-53614447 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 134, 102 |
| Conread position: | 19-253 |
| Cow position: | chr19:48767337-48767118 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 19-386 |
| Cow position: | chr19:14805648-14805993 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 13 |
| Conread position: | 19-396 |
| Cow position: | chr19:45311588-45311209 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 19-397 |
| Cow position: | chr19:25816309-25815917 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 255 |
| Conread position: | 19-397 |
| Cow position: | chr19:52640072-52640442 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-405 |
| Cow position: | chr19:6592230-6591874 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 30 |
| Conread position: | 20-394 |
| Cow position: | chr19:45592712-45592374 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 31-281 |
| Cow position: | chr19:14803065-14803314 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 107, 224 |
| Conread position: | 221-391 |
| Cow position: | chr19:11103361-11103525 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 143 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 247-410 |
| Cow position: | chr19:48766885-48766732 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 82, 8 |
| Conread position: | 18-336 |
| Cow position: | chr2:54924065-54924370 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 100 |
| Conread position: | 19-140 |
| Cow position: | chr2:41128380-41128500 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-173 |
| Cow position: | chr2:68644288-68644137 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-392 |
| Cow position: | chr2:68255492-68255130 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 19-396 |
| Cow position: | chr2:528280-527927 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 11 |
| Conread position: | 20-318 |
| Cow position: | chr2:28308021-28307727 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 125-383 |
| Cow position: | chr2:6725238-6724979 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 13, 92 |
| Conread position: | 146-383 |
| Cow position: | chr2:12523182-12523410 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 218, 26 |
| Conread position: | 146-383 |
| Cow position: | chr2:68680271-68680040 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 203, 18 |
| Conread position: | 207-335 |
| Cow position: | chr2:68643645-68643517 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 71, 48 |
| Conread position: | 207-396 |
| Cow position: | chr2:60890102-60890284 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 156 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 10-325 |
| Cow position: | chr20:6019451-6019762 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 19-419 |
| Cow position: | chr20:24701704-24702094 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 99 |
| Conread position: | 56-360 |
| Cow position: | chr20:38071458-38071766 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 66 |
| Conread position: | 247-396 |
| Cow position: | chr20:13837798-13837654 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 9-401 |
| Cow position: | chr21:41551396-41551777 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 50 |
| Conread position: | 10-357 |
| Cow position: | chr21:23843439-23843787 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 249 |
| Conread position: | 19-173 |
| Cow position: | chr21:1153546-1153695 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-188 |
| Cow position: | chr21:36260302-36260139 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 19-315 |
| Cow position: | chr21:6038800-6038507 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 104 |
| Conread position: | 19-358 |
| Cow position: | chr21:23853346-23853670 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-397 |
| Cow position: | chr21:41297893-41297522 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 20-265 |
| Cow position: | chr21:26513506-26513745 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 164, 101 |
| Conread position: | 23-348 |
| Cow position: | chr21:23308096-23308413 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 27 |
| Conread position: | 34-378 |
| Cow position: | chr21:3511425-3511097 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 55 |
| Conread position: | 107-362 |
| Cow position: | chr21:44562753-44562996 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 15 |
| Conread position: | 133-318 |
| Cow position: | chr21:29035261-29035444 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 146-380 |
| Cow position: | chr21:29981638-29981861 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 146-383 |
| Cow position: | chr21:2518654-2518886 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 219, 47 |
| Conread position: | 175-363 |
| Cow position: | chr21:9956526-9956712 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 180-395 |
| Cow position: | chr21:1153918-1154127 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 10-392 |
| Cow position: | chr22:43956944-43956569 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 373, 112 |
| Conread position: | 94-396 |
| Cow position: | chr22:10090381-10090663 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 118-379 |
| Cow position: | chr22:47011542-47011291 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 106, 34 |
| Conread position: | 151-363 |
| Cow position: | chr22:14129728-14129935 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 129, 99 |
| Conread position: | 208-364 |
| Cow position: | chr22:41521697-41521544 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 136 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 10-369 |
| Cow position: | chr23:2782742-2782386 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 46 |
| Conread position: | 19-135 |
| Cow position: | chr23:29030697-29030812 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-140 |
| Cow position: | chr23:31627369-31627488 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 19-141 |
| Cow position: | chr23:2327630-2327750 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 19-318 |
| Cow position: | chr23:1889695-1889403 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 19-333 |
| Cow position: | chr23:26728032-26728344 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 103 |
| Conread position: | 19-336 |
| Cow position: | chr23:9717009-9716705 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 80 |
| Conread position: | 19-339 |
| Cow position: | chr23:35331363-35331047 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 19-364 |
| Cow position: | chr23:5007815-5008154 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 67 |
| Conread position: | 20-137 |
| Cow position: | chr23:6232210-6232095 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 20-363 |
| Cow position: | chr23:36017577-36017920 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 106 |
| Conread position: | 146-378 |
| Cow position: | chr23:3545322-3545094 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 224-363 |
| Cow position: | chr23:18636338-18636473 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 241-396 |
| Cow position: | chr23:39787983-39787831 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 57 |
| Conread position: | 19-393 |
| Cow position: | chr24:33214391-33214759 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 103 |
| Conread position: | 21-393 |
| Cow position: | chr24:18351101-18351463 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 11 |
| Conread position: | 26-400 |
| Cow position: | chr24:16527524-16527890 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 92 |
| Conread position: | 42-364 |
| Cow position: | chr24:28566976-28567289 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 89, 80 |
| Conread position: | 147-359 |
| Cow position: | chr24:2449937-2449727 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 91, 110 |
| Conread position: | 175-383 |
| Cow position: | chr24:33320983-33321182 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-357 |
| Cow position: | chr25:38160044-38159714 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 19-396 |
| Cow position: | chr25:10380949-10381317 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 40 |
| Conread position: | 19-405 |
| Cow position: | chr25:26647683-26647310 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 20-365 |
| Cow position: | chr25:14923726-14924063 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 20-396 |
| Cow position: | chr25:26641990-26641617 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 110 |
| Conread position: | 23-278 |
| Cow position: | chr25:4672560-4672808 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 104, 94 |
| Conread position: | 23-337 |
| Cow position: | chr25:31152815-31153115 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 96 |
| Conread position: | 73-361 |
| Cow position: | chr25:10318078-10318351 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 142-380 |
| Cow position: | chr25:7519860-7519623 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 223, 82 |
| Conread position: | 146-363 |
| Cow position: | chr25:36107765-36107560 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 146-383 |
| Cow position: | chr25:7325004-7324767 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 104 |
| Conread position: | 247-394 |
| Cow position: | chr25:4673010-4673162 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 101, 8 |
| Conread position: | 18-410 |
| Cow position: | chr26:5995609-5995989 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 371, 100 |
| Conread position: | 19-360 |
| Cow position: | chr26:34362908-34363253 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 71 |
| Conread position: | 19-232 |
| Cow position: | chr27:12679546-12679757 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 20-433 |
| Cow position: | chr27:1032309-1031910 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 21-239 |
| Cow position: | chr27:31144054-31144270 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 60, 24 |
| Conread position: | 146-383 |
| Cow position: | chr27:29701881-29702116 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 52, 65 |
| Conread position: | 231-383 |
| Cow position: | chr27:8432690-8432537 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 123, 22 |
| Conread position: | 268-397 |
| Cow position: | chr27:12679759-12679884 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 19-137 |
| Cow position: | chr28:4217296-4217179 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 21-364 |
| Cow position: | chr28:5169939-5169599 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 101 |
| Conread position: | 27-310 |
| Cow position: | chr28:4076421-4076700 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 50 |
| Conread position: | 38-406 |
| Cow position: | chr28:34225715-34225361 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 83 |
| Conread position: | 146-379 |
| Cow position: | chr28:8578829-8579052 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 227, 108 |
| Conread position: | 152-378 |
| Cow position: | chr28:8151192-8150974 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 179-328 |
| Cow position: | chr28:5448049-5448196 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1-140 |
| Cow position: | chr29:21476089-21475951 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 10-333 |
| Cow position: | chr29:31653478-31653156 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 313, 108 |
| Conread position: | 19-136 |
| Cow position: | chr29:1751843-1751963 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 19-323 |
| Cow position: | chr29:43079108-43079406 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 99 |
| Conread position: | 20-137 |
| Cow position: | chr29:10124545-10124662 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 98 |
| Conread position: | 21-248 |
| Cow position: | chr29:2496049-2496275 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 23-137 |
| Cow position: | chr29:33610386-33610499 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 130-269 |
| Cow position: | chr29:28401771-28401633 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 15, 125 |
| Conread position: | 146-355 |
| Cow position: | chr29:43309297-43309096 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 154-396 |
| Cow position: | chr29:33610739-33610973 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 183-363 |
| Cow position: | chr29:33003752-33003574 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 119, 70 |
| Conread position: | 243-396 |
| Cow position: | chr29:2496518-2496664 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 95, 12 |
| Conread position: | 259-395 |
| Cow position: | chr29:31653169-31653034 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 82, 37 |
| Conread position: | 10-316 |
| Cow position: | chr3:2887267-2886968 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 19-137 |
| Cow position: | chr3:59560217-59560100 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-138 |
| Cow position: | chr3:66133609-66133491 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-140 |
| Cow position: | chr3:39155179-39155299 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-174 |
| Cow position: | chr3:42062580-42062733 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 19-361 |
| Cow position: | chr3:34265220-34264889 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 103 |
| Conread position: | 19-363 |
| Cow position: | chr3:47695838-47696179 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 19-364 |
| Cow position: | chr3:82265776-82266120 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 8 |
| Conread position: | 19-365 |
| Cow position: | chr3:27298850-27298520 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 104 |
| Conread position: | 19-394 |
| Cow position: | chr3:33598730-33599101 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 83 |
| Conread position: | 19-394 |
| Cow position: | chr3:84393862-84394233 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 100 |
| Conread position: | 19-422 |
| Cow position: | chr3:2882212-2881843 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 44 |
| Conread position: | 23-398 |
| Cow position: | chr3:74786741-74787091 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 146-348 |
| Cow position: | chr3:29147664-29147471 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 165-396 |
| Cow position: | chr3:81857999-81858223 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 178-396 |
| Cow position: | chr3:6904301-6904513 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 180-376 |
| Cow position: | chr3:8004632-8004438 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 57, 76 |
| Conread position: | 180-383 |
| Cow position: | chr3:10151861-10151652 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 19, 79 |
| Conread position: | 207-396 |
| Cow position: | chr3:42062737-42062921 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 48 |
| Conread position: | 14-140 |
| Cow position: | chr4:44716304-44716178 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 110 |
| Conread position: | 19-136 |
| Cow position: | chr4:24659611-24659727 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-379 |
| Cow position: | chr4:20257507-20257132 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 50 |
| Conread position: | 19-396 |
| Cow position: | chr4:55027786-55028145 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 103 |
| Conread position: | 24-396 |
| Cow position: | chr4:46679338-46679694 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 31-331 |
| Cow position: | chr4:46678890-46679172 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 31-396 |
| Cow position: | chr4:68650665-68650308 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 85-406 |
| Cow position: | chr4:54963067-54963372 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 236-363 |
| Cow position: | chr4:65840867-65840994 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 48 |
| Conread position: | 19-136 |
| Cow position: | chr5:23757943-23758058 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 19-140 |
| Cow position: | chr5:69534893-69535013 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-397 |
| Cow position: | chr5:71746876-71747247 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 16 |
| Conread position: | 20-398 |
| Cow position: | chr5:49163655-49163289 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 103 |
| Conread position: | 49-396 |
| Cow position: | chr5:6134404-6134063 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 23 |
| Conread position: | 71-399 |
| Cow position: | chr5:54385242-54385534 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 151-266 |
| Cow position: | chr5:42005050-42004936 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 33, 104 |
| Conread position: | 151-396 |
| Cow position: | chr5:50032320-50032552 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 216, 64 |
| Conread position: | 182-394 |
| Cow position: | chr5:38594675-38594886 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 73 |
| Conread position: | 185-325 |
| Cow position: | chr5:56827897-56827759 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 205-396 |
| Cow position: | chr5:74675317-74675501 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 157 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 209-318 |
| Cow position: | chr5:25632862-25632969 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 19-140 |
| Cow position: | chr6:60321975-60321854 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 100 |
| Conread position: | 19-228 |
| Cow position: | chr6:67758415-67758619 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 37 |
| Conread position: | 19-360 |
| Cow position: | chr6:2314240-2314567 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 103 |
| Conread position: | 19-396 |
| Cow position: | chr6:661079-660709 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 56 |
| Conread position: | 19-396 |
| Cow position: | chr6:21263082-21262710 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 103 |
| Conread position: | 20-336 |
| Cow position: | chr6:10722175-10722482 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 61, 135 |
| Conread position: | 21-396 |
| Cow position: | chr6:30202-29837 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 101 |
| Conread position: | 151-383 |
| Cow position: | chr6:418911-418677 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 213, 104 |
| Conread position: | 168-363 |
| Cow position: | chr6:60355284-60355091 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 168-407 |
| Cow position: | chr6:11945297-11945061 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 119, 86 |
| Conread position: | 207-342 |
| Cow position: | chr6:67758824-67758958 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 49 |
| Conread position: | 19-136 |
| Cow position: | chr7:21532819-21532703 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 19-140 |
| Cow position: | chr7:48660780-48660660 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-362 |
| Cow position: | chr7:8286315-8286649 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 124 |
| Conread position: | 19-362 |
| Cow position: | chr7:22640599-22640275 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 19-397 |
| Cow position: | chr7:11706076-11705698 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 84 |
| Conread position: | 20-259 |
| Cow position: | chr7:33019936-33020174 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 19-189 |
| Cow position: | chr8:29423019-29422849 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 104 |
| Conread position: | 19-396 |
| Cow position: | chr8:48203142-48202780 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 103 |
| Conread position: | 19-405 |
| Cow position: | chr8:43340801-43341175 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 364, 96 |
| Conread position: | 23-396 |
| Cow position: | chr8:11619656-11619291 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 26-390 |
| Cow position: | chr8:37438147-37438485 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 47-365 |
| Cow position: | chr8:7454861-7455167 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 57-364 |
| Cow position: | chr8:1806720-1807013 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 97-392 |
| Cow position: | chr8:1781083-1781363 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 121-363 |
| Cow position: | chr8:52534595-52534834 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 18 |
| Conread position: | 146-328 |
| Cow position: | chr8:47411651-47411474 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 146-363 |
| Cow position: | chr8:12438004-12437794 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 146-363 |
| Cow position: | chr8:33985124-33984917 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 38, 109 |
| Conread position: | 146-363 |
| Cow position: | chr8:36336506-36336719 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 146-383 |
| Cow position: | chr8:43013402-43013635 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 218, 108 |
| Conread position: | 10-396 |
| Cow position: | chr9:19453276-19452894 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 21 |
| Conread position: | 18-410 |
| Cow position: | chr9:3040524-3040149 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 381, 104 |
| Conread position: | 19-135 |
| Cow position: | chr9:56594697-56594582 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-287 |
| Cow position: | chr9:34408670-34408420 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 33 |
| Conread position: | 19-359 |
| Cow position: | chr9:33225796-33226132 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 19-389 |
| Cow position: | chr9:44974317-44974684 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 105 |
| Conread position: | 19-391 |
| Cow position: | chr9:9691826-9692196 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 103 |
| Conread position: | 19-396 |
| Cow position: | chr9:42787624-42787995 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 105 |
| Conread position: | 19-402 |
| Cow position: | chr9:58127564-58127946 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 77 |
| Conread position: | 20-349 |
| Cow position: | chr9:40995987-40995680 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 236 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 30-396 |
| Cow position: | chr9:28258816-28259174 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 88 |
| Conread position: | 41-365 |
| Cow position: | chr9:63916323-63916018 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 120-409 |
| Cow position: | chr9:42782809-42783091 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 146-363 |
| Cow position: | chr9:48393667-48393459 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 154-352 |
| Cow position: | chr9:64612874-64612675 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 172-378 |
| Cow position: | chr9:1863519-1863306 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 129, 80 |
| Conread position: | 223-393 |
| Cow position: | chr9:18403525-18403363 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 62, 10 |
| Conread position: | 146-328 |
| Cow position: | chrX:4504766-4504593 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 146-363 |
| Cow position: | chrX:42570060-42569848 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 147-378 |
| Cow position: | chrX:10426389-10426617 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 178-363 |
| Cow position: | chrX:29775469-29775290 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 77, 0 |