Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8023C09.3 |
| Conread position: | 52-205 |
| Cow position: | chr18:52895005-52894853 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 62-205 |
| Cow position: | chr18:52915595-52915452 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 178-310 |
| Cow position: | chr18:52894775-52894643 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 304-503 |
| Cow position: | chr18:52915129-52914930 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 335-505 |
| Cow position: | chr18:52893226-52893056 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 144 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 507-677 |
| Cow position: | chr18:52892858-52892688 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 507-677 |
| Cow position: | chr18:52914734-52914564 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 674-784 |
| Cow position: | chr18:52892287-52892177 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 108, 101 |
| Conread position: | 674-784 |
| Cow position: | chr18:52914297-52914187 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 783-1035 |
| Cow position: | chr18:52914024-52913772 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 183 |
| Conread position: | 783-1209 |
| Cow position: | chr18:52892013-52891586 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 93 |
| Conread position: | 1055-1202 |
| Cow position: | chr18:52913620-52913471 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 93, 64 |
| Conread position: | 23-205 |
| Cow position: | chr3:68726756-68726936 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 8 |
| Conread position: | 53-205 |
| Cow position: | chr3:68688026-68688179 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 57-205 |
| Cow position: | chr3:68658345-68658493 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 59-205 |
| Cow position: | chr3:68646043-68646189 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 62-205 |
| Cow position: | chr3:68674336-68674479 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-505 |
| Cow position: | chr3:68658874-68659074 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 304-505 |
| Cow position: | chr3:68674857-68675058 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-505 |
| Cow position: | chr3:68689115-68689313 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 304-505 |
| Cow position: | chr3:68721227-68721428 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-505 |
| Cow position: | chr3:68727325-68727526 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 306-505 |
| Cow position: | chr3:68646582-68646781 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 506-677 |
| Cow position: | chr3:68675257-68675425 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 507-677 |
| Cow position: | chr3:68646973-68647143 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 507-677 |
| Cow position: | chr3:68659271-68659441 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 144 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 507-677 |
| Cow position: | chr3:68689516-68689686 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 143 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 507-677 |
| Cow position: | chr3:68721628-68721798 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 144 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 507-677 |
| Cow position: | chr3:68727657-68727829 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 146 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 95, 51 |
| Conread position: | 673-784 |
| Cow position: | chr3:68675693-68675804 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 674-784 |
| Cow position: | chr3:68659711-68659821 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 674-784 |
| Cow position: | chr3:68689952-68690062 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 674-784 |
| Cow position: | chr3:68722066-68722176 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 783-898 |
| Cow position: | chr3:68647687-68647802 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 783-1108 |
| Cow position: | chr3:68728374-68728699 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 63 |
| Conread position: | 783-1209 |
| Cow position: | chr3:68690226-68690647 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 251 |
| Conread position: | 783-1209 |
| Cow position: | chr3:68722337-68722774 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 219 |
| Conread position: | 1046-1200 |
| Cow position: | chr3:68660748-68660905 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 73 |