Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8025P08.5
        

               Conread position:
               41-249
               

               Cow position:
               chr1:30672591-30672802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               73-255
               

               Cow position:
               chr1:36528939-36529122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               149
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               73-404
               

               Cow position:
               chr1:68334169-68333829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               20, 189
               

               Conread position:
               92-253
               

               Cow position:
               chr1:8844208-8844368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               92-636
               

               Cow position:
               chr1:69996003-69996574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               579
               

               Alignm identity:
               364
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               173, 96
               

               Conread position:
               94-216
               

               Cow position:
               chr1:50910765-50910643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-216
               

               Cow position:
               chr1:79136975-79136851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               22, 107
               

               Conread position:
               94-233
               

               Cow position:
               chr1:33172105-33171967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               94-233
               

               Cow position:
               chr1:48587489-48587350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               73, 86
               

               Conread position:
               94-235
               

               Cow position:
               chr1:69265450-69265591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               47, 89
               

               Conread position:
               94-246
               

               Cow position:
               chr1:87452522-87452371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               94-248
               

               Cow position:
               chr1:43428053-43427897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               11, 108
               

               Conread position:
               94-249
               

               Cow position:
               chr1:10888445-10888287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               119, 40
               

               Conread position:
               94-251
               

               Cow position:
               chr1:42770417-42770257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               94-252
               

               Cow position:
               chr1:15229441-15229601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               119, 31
               

               Conread position:
               94-254
               

               Cow position:
               chr1:83105616-83105776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr1:6425939-6426100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr1:13407090-13406926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               107, 83
               

               Conread position:
               94-255
               

               Cow position:
               chr1:16849297-16849458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr1:26572653-26572492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr1:42423270-42423431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               104, 151
               

               Conread position:
               94-255
               

               Cow position:
               chr1:44511203-44511031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr1:73244268-73244429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr1:73641553-73641395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr1:74880606-74880446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr1:74886846-74887003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               107, 42
               

               Conread position:
               94-255
               

               Cow position:
               chr1:74899825-74899663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               12, 132
               

               Conread position:
               94-255
               

               Cow position:
               chr1:85527396-85527234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               136
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               94-258
               

               Cow position:
               chr1:9521599-9521434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               29, 98
               

               Conread position:
               94-258
               

               Cow position:
               chr1:43221280-43221119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               94-258
               

               Cow position:
               chr1:91076142-91076303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               94-261
               

               Cow position:
               chr1:3615001-3614834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-417
               

               Cow position:
               chr1:13269381-13269046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               181, 120
               

               Conread position:
               94-417
               

               Cow position:
               chr1:50593481-50593816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               181, 0
               

               Conread position:
               94-417
               

               Cow position:
               chr1:53250028-53249698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               181, 21
               

               Conread position:
               94-417
               

               Cow position:
               chr1:56652552-56652226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               94-421
               

               Cow position:
               chr1:31969275-31968939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               171, 94
               

               Conread position:
               94-435
               

               Cow position:
               chr1:25263361-25263690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               165, 122
               

               Conread position:
               94-625
               

               Cow position:
               chr1:71599534-71598988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               561
               

               Alignm identity:
               363
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               75, 28
               

               Conread position:
               94-638
               

               Cow position:
               chr1:50371050-50370476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               577
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 165
               

               Conread position:
               94-643
               

               Cow position:
               chr1:74397404-74397980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               585
               

               Alignm identity:
               379
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               151, 43
               

               Conread position:
               94-643
               

               Cow position:
               chr1:100065659-100065091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               580
               

               Alignm identity:
               368
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               217, 12
               

               Conread position:
               95-255
               

               Cow position:
               chr1:7637049-7637207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               37, 66
               

               Conread position:
               95-255
               

               Cow position:
               chr1:80714093-80713933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-407
               

               Cow position:
               chr1:12429877-12429577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               111, 12
               

               Conread position:
               95-413
               

               Cow position:
               chr1:90101244-90100913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               170, 164
               

               Conread position:
               96-224
               

               Cow position:
               chr1:52219023-52219151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 94
               

               Conread position:
               96-225
               

               Cow position:
               chr1:19437555-19437426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-235
               

               Cow position:
               chr1:11895719-11895580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-243
               

               Cow position:
               chr1:80670584-80670727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               96-248
               

               Cow position:
               chr1:66914043-66914195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-250
               

               Cow position:
               chr1:31158783-31158629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               75, 85
               

               Conread position:
               96-255
               

               Cow position:
               chr1:15492130-15491975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               51, 121
               

               Conread position:
               96-255
               

               Cow position:
               chr1:25355349-25355513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr1:40579553-40579712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr1:47294908-47295067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr1:78300293-78300134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-249
               

               Cow position:
               chr1:41277368-41277216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-255
               

               Cow position:
               chr1:20046012-20046169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               97-255
               

               Cow position:
               chr1:30912401-30912558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               98-249
               

               Cow position:
               chr1:38266407-38266255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 83
               

               Conread position:
               98-254
               

               Cow position:
               chr1:73914480-73914323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               62, 120
               

               Conread position:
               98-255
               

               Cow position:
               chr1:37556223-37556379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               100, 14
               

               Conread position:
               98-417
               

               Cow position:
               chr1:63023712-63023387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               32, 202
               

               Conread position:
               98-666
               

               Cow position:
               chr1:75904282-75903699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               593
               

               Alignm identity:
               371
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               79, 309
               

               Conread position:
               99-418
               

               Cow position:
               chr1:43519865-43519535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               218, 204
               

               Conread position:
               100-255
               

               Cow position:
               chr1:71346938-71346784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               105, 21
               

               Conread position:
               105-250
               

               Cow position:
               chr1:41268459-41268604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               140, 67
               

               Conread position:
               105-255
               

               Cow position:
               chr1:55435213-55435065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               109-638
               

               Cow position:
               chr1:83648004-83647452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               557
               

               Alignm identity:
               352
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               166, 454
               

               Conread position:
               112-235
               

               Cow position:
               chr1:95786964-95786841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               112-255
               

               Cow position:
               chr1:100029990-100030133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               114-264
               

               Cow position:
               chr1:46335876-46336024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               114-414
               

               Cow position:
               chr1:99438610-99438306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               151, 11
               

               Conread position:
               115-251
               

               Cow position:
               chr1:9683299-9683168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               125-255
               

               Cow position:
               chr1:80128268-80128393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               146-253
               

               Cow position:
               chr1:26954819-26954714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               157-435
               

               Cow position:
               chr1:69210607-69210333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               135, 74
               

               Conread position:
               274-640
               

               Cow position:
               chr1:20046219-20046591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               52, 193
               

               Conread position:
               66-417
               

               Cow position:
               chr10:56451560-56451922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               8, 126
               

               Conread position:
               94-234
               

               Cow position:
               chr10:16840333-16840473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-249
               

               Cow position:
               chr10:3327201-3327352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               94-249
               

               Cow position:
               chr10:22152505-22152658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               94-249
               

               Cow position:
               chr10:58106756-58106909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr10:22268441-22268287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               94-254
               

               Cow position:
               chr10:39265450-39265610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr10:16583775-16583617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr10:21023299-21023144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr10:43163936-43163789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr10:47994881-47994725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               22, 44
               

               Conread position:
               94-255
               

               Cow position:
               chr10:56091042-56091202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr10:63850141-63850304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               130, 12
               

               Conread position:
               94-407
               

               Cow position:
               chr10:48883298-48883609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               154, 135
               

               Conread position:
               94-412
               

               Cow position:
               chr10:1442500-1442171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               188, 135
               

               Conread position:
               94-417
               

               Cow position:
               chr10:49836118-49836439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               88, 13
               

               Conread position:
               94-417
               

               Cow position:
               chr10:66353914-66353579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               161, 107
               

               Conread position:
               94-629
               

               Cow position:
               chr10:26692365-26692932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               571
               

               Alignm identity:
               371
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               165, 104
               

               Conread position:
               95-255
               

               Cow position:
               chr10:9100926-9100764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               95-258
               

               Cow position:
               chr10:39835712-39835554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               95-258
               

               Cow position:
               chr10:39837905-39837747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               96-249
               

               Cow position:
               chr10:25922908-25923060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               96-251
               

               Cow position:
               chr10:9608585-9608429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr10:16061887-16062047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               93, 65
               

               Conread position:
               96-255
               

               Cow position:
               chr10:28718133-28718292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr10:39380263-39380105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr10:51762430-51762272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr10:61506617-61506775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               96-258
               

               Cow position:
               chr10:12938020-12938181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               99-264
               

               Cow position:
               chr10:49931181-49931018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               100-247
               

               Cow position:
               chr10:61882476-61882625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               100-251
               

               Cow position:
               chr10:55401941-55401790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-255
               

               Cow position:
               chr10:25631676-25631829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               102-255
               

               Cow position:
               chr10:24336853-24337006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               103-413
               

               Cow position:
               chr10:23542999-23542683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               204, 21
               

               Conread position:
               114-416
               

               Cow position:
               chr10:61679916-61679600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 74
               

               Conread position:
               117-249
               

               Cow position:
               chr10:49876905-49876773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               120-638
               

               Cow position:
               chr10:53204014-53204558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               549
               

               Alignm identity:
               352
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               145, 139
               

               Conread position:
               121-417
               

               Cow position:
               chr10:24959861-24959554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               159, 78
               

               Conread position:
               128-255
               

               Cow position:
               chr10:35552749-35552876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               129-264
               

               Cow position:
               chr10:33218101-33217967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               268-599
               

               Cow position:
               chr10:35553111-35553436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               171, 16
               

               Conread position:
               274-648
               

               Cow position:
               chr10:15841584-15841212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               141, 204
               

               Conread position:
               70-253
               

               Cow position:
               chr11:25135422-25135606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               72-255
               

               Cow position:
               chr11:48696694-48696878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               26, 132
               

               Conread position:
               82-255
               

               Cow position:
               chr11:9385702-9385528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               94-217
               

               Cow position:
               chr11:43844906-43844785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               94-240
               

               Cow position:
               chr11:77436967-77437111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               94-243
               

               Cow position:
               chr11:41562749-41562896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               94-249
               

               Cow position:
               chr11:17857130-17857285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-251
               

               Cow position:
               chr11:35240580-35240737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               133
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-252
               

               Cow position:
               chr11:64477718-64477568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr11:35150208-35150051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr11:35412060-35412220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               39, 95
               

               Conread position:
               94-254
               

               Cow position:
               chr11:40643028-40643188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-254
               

               Cow position:
               chr11:71013124-71013282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr11:9714490-9714329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr11:10807678-10807518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr11:13887694-13887532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr11:18922014-18921853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               153, 32
               

               Conread position:
               94-255
               

               Cow position:
               chr11:29622941-29622781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr11:31429417-31429258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr11:41424228-41424381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr11:45839223-45839066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr11:67435270-67435111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               94-255
               

               Cow position:
               chr11:68025510-68025351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 42
               

               Conread position:
               94-255
               

               Cow position:
               chr11:72462280-72462439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr11:74193446-74193285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               111, 73
               

               Conread position:
               94-255
               

               Cow position:
               chr11:75370127-75370290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr11:76603364-76603526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr11:84742309-84742464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr11:85679994-85680155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               27, 32
               

               Conread position:
               94-257
               

               Cow position:
               chr11:37442021-37442182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               11, 95
               

               Conread position:
               94-264
               

               Cow position:
               chr11:13972362-13972193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               153, 125
               

               Conread position:
               94-405
               

               Cow position:
               chr11:16069712-16069395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               76, 9
               

               Conread position:
               94-407
               

               Cow position:
               chr11:45295967-45296274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 32
               

               Conread position:
               94-412
               

               Cow position:
               chr11:68276432-68276765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               232
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               94-413
               

               Cow position:
               chr11:20572882-20572556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               35, 165
               

               Conread position:
               94-414
               

               Cow position:
               chr11:65682600-65682930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               171, 165
               

               Conread position:
               94-418
               

               Cow position:
               chr11:52310966-52310646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               82, 60
               

               Conread position:
               94-447
               

               Cow position:
               chr11:79098518-79098157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               171, 18
               

               Conread position:
               94-525
               

               Cow position:
               chr11:39426998-39426572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               94-611
               

               Cow position:
               chr11:34572398-34571858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               546
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 107
               

               Conread position:
               94-638
               

               Cow position:
               chr11:16884639-16884077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 101
               

               Conread position:
               95-253
               

               Cow position:
               chr11:64726391-64726236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr11:12006102-12006260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr11:80737510-80737669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-417
               

               Cow position:
               chr11:56106655-56106333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 230
               

               Conread position:
               96-579
               

               Cow position:
               chr11:59948672-59948174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               326
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               169, 49
               

               Conread position:
               97-249
               

               Cow position:
               chr11:40500580-40500732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               68, 28
               

               Conread position:
               97-255
               

               Cow position:
               chr11:40491928-40492086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-228
               

               Cow position:
               chr11:16685828-16685960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               17, 121
               

               Conread position:
               98-249
               

               Cow position:
               chr11:52889320-52889474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               65, 137
               

               Conread position:
               98-251
               

               Cow position:
               chr11:52248333-52248487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr11:3280418-3280570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               102-417
               

               Cow position:
               chr11:35232264-35232578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               190, 79
               

               Conread position:
               104-261
               

               Cow position:
               chr11:8717750-8717595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               68, 98
               

               Conread position:
               108-412
               

               Cow position:
               chr11:56706339-56706656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               16, 90
               

               Conread position:
               109-620
               

               Cow position:
               chr11:84810614-84811156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               547
               

               Alignm identity:
               342
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               32, 154
               

               Conread position:
               112-588
               

               Cow position:
               chr11:35116737-35116253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               319
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               46, 156
               

               Conread position:
               114-252
               

               Cow position:
               chr11:68662145-68662283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               114-264
               

               Cow position:
               chr11:70194014-70193866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               120-638
               

               Cow position:
               chr11:50468205-50467663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               547
               

               Alignm identity:
               356
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               122, 81
               

               Conread position:
               122-412
               

               Cow position:
               chr11:40298935-40298645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               159, 12
               

               Conread position:
               132-255
               

               Cow position:
               chr11:61291093-61290970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               134-255
               

               Cow position:
               chr11:49596133-49596252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               138-255
               

               Cow position:
               chr11:59156326-59156443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               142-255
               

               Cow position:
               chr11:66485729-66485841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               142-411
               

               Cow position:
               chr11:54316608-54316882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               126, 48
               

               Conread position:
               156-255
               

               Cow position:
               chr11:28022742-28022841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               348-644
               

               Cow position:
               chr11:53239754-53240063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               419-638
               

               Cow position:
               chr11:27955605-27955819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               94-237
               

               Cow position:
               chr12:15878096-15878237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               94-247
               

               Cow position:
               chr12:10791723-10791877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               94-254
               

               Cow position:
               chr12:20433219-20433060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               113, 83
               

               Conread position:
               94-255
               

               Cow position:
               chr12:7096470-7096312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr12:8106486-8106656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr12:14752955-14752798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr12:22134050-22133890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr12:34876514-34876679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr12:45121043-45121207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 133
               

               Conread position:
               94-265
               

               Cow position:
               chr12:5480192-5480023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               94-380
               

               Cow position:
               chr12:32237541-32237251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               171, 86
               

               Conread position:
               94-630
               

               Cow position:
               chr12:41088718-41088149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               359
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               102, 71
               

               Conread position:
               94-637
               

               Cow position:
               chr12:8556335-8556900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               571
               

               Alignm identity:
               355
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               165, 59
               

               Conread position:
               94-638
               

               Cow position:
               chr12:25380538-25379981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               565
               

               Alignm identity:
               362
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               135, 44
               

               Conread position:
               95-255
               

               Cow position:
               chr12:45476364-45476211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               95-258
               

               Cow position:
               chr12:41227985-41228145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               96-249
               

               Cow position:
               chr12:3034452-3034301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               100-251
               

               Cow position:
               chr12:13975303-13975447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               101-644
               

               Cow position:
               chr12:1239105-1238549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               566
               

               Alignm identity:
               347
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               147, 171
               

               Conread position:
               105-241
               

               Cow position:
               chr12:25940454-25940318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               105-252
               

               Cow position:
               chr12:20638245-20638390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               112-255
               

               Cow position:
               chr12:23027327-23027467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               112-637
               

               Cow position:
               chr12:30131474-30132029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               564
               

               Alignm identity:
               359
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               111, 26
               

               Conread position:
               114-265
               

               Cow position:
               chr12:43265623-43265773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               136-403
               

               Cow position:
               chr12:1696700-1696423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 52
               

               Conread position:
               413-760
               

               Cow position:
               chr12:34659040-34658694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               79-264
               

               Cow position:
               chr13:7547632-7547813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 12
               

               Conread position:
               92-413
               

               Cow position:
               chr13:55964445-55964774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               10, 282
               

               Conread position:
               94-251
               

               Cow position:
               chr13:31656810-31656656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               135
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               94-251
               

               Cow position:
               chr13:35897686-35897838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr13:15882825-15882668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               94-254
               

               Cow position:
               chr13:21588051-21588209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr13:6900430-6900271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr13:9398572-9398413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr13:23207453-23207295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr13:26259769-26259930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr13:28740034-28740192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               104, 84
               

               Conread position:
               94-255
               

               Cow position:
               chr13:30930232-30930393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr13:31656638-31656479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr13:41566648-41566487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr13:49675720-49675563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr13:61081620-61081459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               130, 41
               

               Conread position:
               94-258
               

               Cow position:
               chr13:15336756-15336915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr13:5292421-5292252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               94-331
               

               Cow position:
               chr13:571361-571595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               137, 101
               

               Conread position:
               94-345
               

               Cow position:
               chr13:34016641-34016379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               94-417
               

               Cow position:
               chr13:62595034-62594698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               94-624
               

               Cow position:
               chr13:17776844-17777398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               564
               

               Alignm identity:
               359
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               29, 348
               

               Conread position:
               94-626
               

               Cow position:
               chr13:13289476-13288961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               546
               

               Alignm identity:
               361
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               165, 238
               

               Conread position:
               94-648
               

               Cow position:
               chr13:22569133-22568548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               591
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 163
               

               Conread position:
               95-255
               

               Cow position:
               chr13:54242321-54242160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               18, 78
               

               Conread position:
               96-251
               

               Cow position:
               chr13:26633213-26633369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr13:395001-395160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-255
               

               Cow position:
               chr13:4466777-4466936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr13:35766513-35766668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               98-623
               

               Cow position:
               chr13:33710002-33710545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               551
               

               Alignm identity:
               345
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               151, 17
               

               Conread position:
               100-264
               

               Cow position:
               chr13:34094386-34094224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               102-255
               

               Cow position:
               chr13:38535650-38535499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               30, 91
               

               Conread position:
               103-255
               

               Cow position:
               chr13:38625738-38625888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               107-255
               

               Cow position:
               chr13:30270291-30270144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               112-255
               

               Cow position:
               chr13:42295859-42296000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               118-255
               

               Cow position:
               chr13:6736317-6736183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               128-255
               

               Cow position:
               chr13:8334679-8334552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               468-638
               

               Cow position:
               chr13:34729894-34729725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               83-258
               

               Cow position:
               chr14:43902819-43902992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               90-255
               

               Cow position:
               chr14:6843470-6843305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               92-255
               

               Cow position:
               chr14:31784376-31784541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               138, 46
               

               Conread position:
               94-250
               

               Cow position:
               chr14:48273940-48274096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               143, 26
               

               Conread position:
               94-251
               

               Cow position:
               chr14:38739734-38739578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 96
               

               Conread position:
               94-251
               

               Cow position:
               chr14:41981688-41981845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               107, 67
               

               Conread position:
               94-255
               

               Cow position:
               chr14:6352813-6352653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr14:12688864-12689020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr14:13932086-13931926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr14:17921183-17921025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr14:22657469-22657629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr14:24966228-24966069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr14:31914628-31914799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               41, 18
               

               Conread position:
               94-255
               

               Cow position:
               chr14:31946568-31946406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr14:33281131-33280969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr14:35322569-35322724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr14:36174454-36174614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 47
               

               Conread position:
               94-255
               

               Cow position:
               chr14:39341214-39341374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               94-257
               

               Cow position:
               chr14:40253013-40252850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-326
               

               Cow position:
               chr14:12801763-12801516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               94-355
               

               Cow position:
               chr14:43180670-43180401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 129
               

               Conread position:
               96-249
               

               Cow position:
               chr14:18531463-18531615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               96-254
               

               Cow position:
               chr14:11756505-11756665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               96-254
               

               Cow position:
               chr14:33962935-33962778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr14:1734852-1734693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-421
               

               Cow position:
               chr14:9567820-9567498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               77, 156
               

               Conread position:
               99-255
               

               Cow position:
               chr14:13836948-13837103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               99-265
               

               Cow position:
               chr14:14114729-14114893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               100-258
               

               Cow position:
               chr14:35088480-35088326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               100-636
               

               Cow position:
               chr14:23676946-23676402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               554
               

               Alignm identity:
               336
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               133, 89
               

               Conread position:
               105-255
               

               Cow position:
               chr14:45118577-45118728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               60, 100
               

               Conread position:
               107-258
               

               Cow position:
               chr14:31494299-31494148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               108-255
               

               Cow position:
               chr14:41511582-41511729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               112-252
               

               Cow position:
               chr14:31966035-31965899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               112-255
               

               Cow position:
               chr14:34148626-34148484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               120-416
               

               Cow position:
               chr14:37123439-37123138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               145, 5
               

               Conread position:
               274-627
               

               Cow position:
               chr14:18014226-18013864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               241
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               123, 86
               

               Conread position:
               417-638
               

               Cow position:
               chr14:43180267-43180056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               72-418
               

               Cow position:
               chr15:9038527-9038168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               26, 113
               

               Conread position:
               79-412
               

               Cow position:
               chr15:11612542-11612880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               92-255
               

               Cow position:
               chr15:7583952-7583797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               91, 34
               

               Conread position:
               94-247
               

               Cow position:
               chr15:26322843-26322694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               42, 105
               

               Conread position:
               94-254
               

               Cow position:
               chr15:14719443-14719596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               94-254
               

               Cow position:
               chr15:46639512-46639353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr15:9390543-9390705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr15:13135165-13135004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr15:25660824-25660663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               136
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               22, 33
               

               Conread position:
               94-255
               

               Cow position:
               chr15:28038354-28038199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr15:29813480-29813635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr15:31944494-31944657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr15:43640656-43640815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr15:36298638-36298469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               94-332
               

               Cow position:
               chr15:264013-264259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               140, 107
               

               Conread position:
               94-334
               

               Cow position:
               chr15:9660766-9660506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               94-407
               

               Cow position:
               chr15:26596669-26596344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               89, 26
               

               Conread position:
               94-413
               

               Cow position:
               chr15:9046314-9046640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               56, 183
               

               Conread position:
               94-413
               

               Cow position:
               chr15:12962925-12962599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               171, 18
               

               Conread position:
               94-415
               

               Cow position:
               chr15:13536830-13536503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               165, 26
               

               Conread position:
               94-417
               

               Cow position:
               chr15:7311625-7311953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               172, 57
               

               Conread position:
               94-557
               

               Cow position:
               chr15:41148418-41148891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 165
               

               Conread position:
               94-629
               

               Cow position:
               chr15:38608381-38607866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               546
               

               Alignm identity:
               358
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               74, 47
               

               Conread position:
               95-255
               

               Cow position:
               chr15:7662775-7662614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               95-643
               

               Cow position:
               chr15:19708137-19707573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               571
               

               Alignm identity:
               364
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               33, 147
               

               Conread position:
               96-249
               

               Cow position:
               chr15:16486475-16486628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr15:11684785-11684942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr15:14411554-14411713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               80, 106
               

               Conread position:
               96-255
               

               Cow position:
               chr15:45620228-45620387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr15:48288248-48288406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               96-265
               

               Cow position:
               chr15:42645602-42645437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               96-417
               

               Cow position:
               chr15:21299274-21299614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               83, 108
               

               Conread position:
               97-241
               

               Cow position:
               chr15:9369022-9369166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-258
               

               Cow position:
               chr15:50948736-50948573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               85, 105
               

               Conread position:
               97-638
               

               Cow position:
               chr15:33268295-33267744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               561
               

               Alignm identity:
               352
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               300, 81
               

               Conread position:
               98-255
               

               Cow position:
               chr15:18370260-18370416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr15:47363954-47364111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               81, 62
               

               Conread position:
               98-417
               

               Cow position:
               chr15:9133255-9133576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               39, 123
               

               Conread position:
               100-251
               

               Cow position:
               chr15:8055936-8056085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               75, 88
               

               Conread position:
               100-255
               

               Cow position:
               chr15:928256-928102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               104-251
               

               Cow position:
               chr15:46550691-46550547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               105-255
               

               Cow position:
               chr15:37714492-37714644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               106-491
               

               Cow position:
               chr15:22238729-22238330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               176, 83
               

               Conread position:
               107-255
               

               Cow position:
               chr15:45152868-45152721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               114-255
               

               Cow position:
               chr15:21809060-21809197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               117-255
               

               Cow position:
               chr15:34275088-34275226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-255
               

               Cow position:
               chr15:48009737-48009871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               122-255
               

               Cow position:
               chr15:42632648-42632515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               122-258
               

               Cow position:
               chr15:11789097-11789231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               126-416
               

               Cow position:
               chr15:151338-151615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               178, 58
               

               Conread position:
               274-638
               

               Cow position:
               chr15:42211651-42211290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               137, 84
               

               Conread position:
               346-638
               

               Cow position:
               chr15:35139177-35139478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               74, 109
               

               Conread position:
               413-627
               

               Cow position:
               chr15:39293588-39293367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               413-643
               

               Cow position:
               chr15:29596962-29597196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               31, 26
               

               Conread position:
               70-249
               

               Cow position:
               chr16:13030153-13029974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               74-255
               

               Cow position:
               chr16:19148717-19148540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 6
               

               Conread position:
               90-255
               

               Cow position:
               chr16:1828948-1829105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               94-220
               

               Cow position:
               chr16:31619127-31619001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-221
               

               Cow position:
               chr16:41654854-41654728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               94-248
               

               Cow position:
               chr16:52391285-52391439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               22, 91
               

               Conread position:
               94-251
               

               Cow position:
               chr16:26923418-26923261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               153, 85
               

               Conread position:
               94-251
               

               Cow position:
               chr16:30695492-30695334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr16:14745209-14745049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr16:19041705-19041868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr16:26422320-26422165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr16:30582312-30582149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr16:38609166-38609008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr16:40839470-40839309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr16:42695714-42695555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr16:50036413-50036575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr16:52472686-52472524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               69, 6
               

               Conread position:
               94-264
               

               Cow position:
               chr16:49583285-49583116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               65, 101
               

               Conread position:
               94-412
               

               Cow position:
               chr16:52308614-52308301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               85, 28
               

               Conread position:
               94-413
               

               Cow position:
               chr16:16200288-16200619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 44
               

               Conread position:
               94-415
               

               Cow position:
               chr16:34310749-34311084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               94-416
               

               Cow position:
               chr16:49509068-49508732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               32, 105
               

               Conread position:
               94-417
               

               Cow position:
               chr16:20124938-20125264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               94-629
               

               Cow position:
               chr16:46527860-46527291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               574
               

               Alignm identity:
               363
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               33, 150
               

               Conread position:
               94-629
               

               Cow position:
               chr16:47814563-47814011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               564
               

               Alignm identity:
               354
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               173, 83
               

               Conread position:
               94-637
               

               Cow position:
               chr16:25923346-25922780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               371
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               80, 190
               

               Conread position:
               96-249
               

               Cow position:
               chr16:19988762-19988915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               96-251
               

               Cow position:
               chr16:26682661-26682815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               149, 16
               

               Conread position:
               96-253
               

               Cow position:
               chr16:6809511-6809352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr16:29133737-29133893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr16:36773049-36773207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr16:44756379-44756220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-342
               

               Cow position:
               chr16:1338202-1338454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               178, 161
               

               Conread position:
               96-414
               

               Cow position:
               chr16:25326215-25325895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               179, 24
               

               Conread position:
               97-253
               

               Cow position:
               chr16:25595548-25595392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-248
               

               Cow position:
               chr16:45236032-45236180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               99-416
               

               Cow position:
               chr16:36949525-36949842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               195, 158
               

               Conread position:
               100-249
               

               Cow position:
               chr16:48415629-48415777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               66, 132
               

               Conread position:
               100-255
               

               Cow position:
               chr16:11132469-11132624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               106-417
               

               Cow position:
               chr16:45802041-45802346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               205, 114
               

               Conread position:
               107-255
               

               Cow position:
               chr16:29737992-29737847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               114-538
               

               Cow position:
               chr16:15045621-15045182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               299
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               38, 8
               

               Conread position:
               125-255
               

               Cow position:
               chr16:32914395-32914531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               138-255
               

               Cow position:
               chr16:5258812-5258930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               156-255
               

               Cow position:
               chr16:35274162-35274261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               273-669
               

               Cow position:
               chr16:47295605-47295994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               166, 88
               

               Conread position:
               275-629
               

               Cow position:
               chr16:6332792-6332430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               99, 210
               

               Conread position:
               410-630
               

               Cow position:
               chr16:19291588-19291370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               54, 73
               

               Conread position:
               411-629
               

               Cow position:
               chr16:40563815-40564031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               35, 72
               

               Conread position:
               67-253
               

               Cow position:
               chr17:14905726-14905533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               81-412
               

               Cow position:
               chr17:17817322-17816973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               34, 184
               

               Conread position:
               92-249
               

               Cow position:
               chr17:29241918-29242074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               97, 6
               

               Conread position:
               94-237
               

               Cow position:
               chr17:12631275-12631132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr17:18898798-18898639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr17:8038995-8039155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr17:18595543-18595703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               32, 95
               

               Conread position:
               94-255
               

               Cow position:
               chr17:18840757-18840597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr17:22238161-22238322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr17:24309809-24309973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr17:44330852-44331013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-258
               

               Cow position:
               chr17:16679783-16679620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               126, 93
               

               Conread position:
               94-408
               

               Cow position:
               chr17:30752431-30752748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               94-484
               

               Cow position:
               chr17:18851449-18851844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               274
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               218, 43
               

               Conread position:
               94-638
               

               Cow position:
               chr17:15814583-15815148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               572
               

               Alignm identity:
               358
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               162, 51
               

               Conread position:
               96-241
               

               Cow position:
               chr17:28046589-28046444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr17:9229644-9229490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               20, 53
               

               Conread position:
               96-414
               

               Cow position:
               chr17:42349929-42349599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               73, 121
               

               Conread position:
               96-628
               

               Cow position:
               chr17:22500999-22501557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               564
               

               Alignm identity:
               358
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               158, 82
               

               Conread position:
               97-248
               

               Cow position:
               chr17:18264856-18264703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               73, 23
               

               Conread position:
               98-250
               

               Cow position:
               chr17:5389871-5390022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr17:3490365-3490522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr17:11942003-11942160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-260
               

               Cow position:
               chr17:16667209-16667047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               102, 82
               

               Conread position:
               101-254
               

               Cow position:
               chr17:2608325-2608479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               29, 143
               

               Conread position:
               101-332
               

               Cow position:
               chr17:20921351-20921579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               172, 88
               

               Conread position:
               103-255
               

               Cow position:
               chr17:38383256-38383400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               104-255
               

               Cow position:
               chr17:18384081-18383932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               105, 68
               

               Conread position:
               105-265
               

               Cow position:
               chr17:3891729-3891566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               26, 158
               

               Conread position:
               108-230
               

               Cow position:
               chr17:41317897-41317775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               120-255
               

               Cow position:
               chr17:32964677-32964810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               126-264
               

               Cow position:
               chr17:36530245-36530108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               62-255
               

               Cow position:
               chr18:32226016-32226212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               11, 123
               

               Conread position:
               91-626
               

               Cow position:
               chr18:24399132-24398571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               571
               

               Alignm identity:
               368
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               174, 34
               

               Conread position:
               92-249
               

               Cow position:
               chr18:41391340-41391496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               94-242
               

               Cow position:
               chr18:8287752-8287607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               32, 9
               

               Conread position:
               94-245
               

               Cow position:
               chr18:6424800-6424647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               94-250
               

               Cow position:
               chr18:13907246-13907089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               34, 143
               

               Conread position:
               94-251
               

               Cow position:
               chr18:14153009-14153166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr18:20755334-20755175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr18:51031882-51031723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr18:3832272-3832433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               133, 137
               

               Conread position:
               94-255
               

               Cow position:
               chr18:21236605-21236445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr18:24587073-24586918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 31
               

               Conread position:
               94-255
               

               Cow position:
               chr18:26503755-26503593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 59
               

               Conread position:
               94-255
               

               Cow position:
               chr18:33373324-33373485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-258
               

               Cow position:
               chr18:36414465-36414629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               94-405
               

               Cow position:
               chr18:42757229-42757544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               161, 57
               

               Conread position:
               94-417
               

               Cow position:
               chr18:19534736-19534407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               171, 160
               

               Conread position:
               94-629
               

               Cow position:
               chr18:46850155-46850709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               557
               

               Alignm identity:
               344
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               56, 49
               

               Conread position:
               95-255
               

               Cow position:
               chr18:9760395-9760234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               156, 75
               

               Conread position:
               95-255
               

               Cow position:
               chr18:16658958-16658798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-257
               

               Cow position:
               chr18:29523046-29523204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr18:25287539-25287697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               98-265
               

               Cow position:
               chr18:36785168-36785335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-255
               

               Cow position:
               chr18:37608716-37608560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-254
               

               Cow position:
               chr18:10101781-10101932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               100-255
               

               Cow position:
               chr18:17153329-17153483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               100-255
               

               Cow position:
               chr18:52803355-52803508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 24
               

               Conread position:
               111-333
               

               Cow position:
               chr18:2028754-2028985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               127, 223
               

               Conread position:
               112-255
               

               Cow position:
               chr18:14318030-14317888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               114-255
               

               Cow position:
               chr18:253038-253176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               87, 24
               

               Conread position:
               117-255
               

               Cow position:
               chr18:54790734-54790872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               118-432
               

               Cow position:
               chr18:28665584-28665910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               5, 144
               

               Conread position:
               122-255
               

               Cow position:
               chr18:40704237-40704370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               126-247
               

               Cow position:
               chr18:17409445-17409324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               130-255
               

               Cow position:
               chr18:17762955-17762830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               280-637
               

               Cow position:
               chr18:42590889-42591248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 119
               

               Conread position:
               427-629
               

               Cow position:
               chr18:38360694-38360494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               22, 55
               

               Conread position:
               92-255
               

               Cow position:
               chr19:7126844-7127007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               93-249
               

               Cow position:
               chr19:21287392-21287236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-249
               

               Cow position:
               chr19:3423104-3422949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-252
               

               Cow position:
               chr19:14368299-14368452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               94-252
               

               Cow position:
               chr19:37797293-37797136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               136, 101
               

               Conread position:
               94-253
               

               Cow position:
               chr19:29145840-29145998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr19:5630584-5630426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr19:9114871-9114711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr19:17749008-17749169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr19:35538869-35538708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr19:36263621-36263462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               94-260
               

               Cow position:
               chr19:15096819-15096984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               137
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr19:26759688-26759856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               96-249
               

               Cow position:
               chr19:40050814-40050661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-254
               

               Cow position:
               chr19:2781657-2781815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-254
               

               Cow position:
               chr19:39884212-39884054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr19:17732508-17732666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               96-415
               

               Cow position:
               chr19:17981737-17982061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               179, 37
               

               Conread position:
               96-638
               

               Cow position:
               chr19:32496305-32495750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               561
               

               Alignm identity:
               351
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               169, 77
               

               Conread position:
               98-245
               

               Cow position:
               chr19:44922102-44921953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 59
               

               Conread position:
               98-247
               

               Cow position:
               chr19:32056341-32056192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr19:33441478-33441321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-255
               

               Cow position:
               chr19:11091004-11091158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               144, 30
               

               Conread position:
               104-478
               

               Cow position:
               chr19:20670308-20669940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               32, 95
               

               Conread position:
               107-248
               

               Cow position:
               chr19:30456422-30456562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               107-250
               

               Cow position:
               chr19:32434263-32434406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               107-255
               

               Cow position:
               chr19:45146954-45147106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               108-255
               

               Cow position:
               chr19:8245906-8245760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               108-411
               

               Cow position:
               chr19:2145301-2145615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               86, 7
               

               Conread position:
               121-255
               

               Cow position:
               chr19:41213673-41213540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               122-629
               

               Cow position:
               chr19:25555416-25554892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               531
               

               Alignm identity:
               329
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               137, 165
               

               Conread position:
               126-339
               

               Cow position:
               chr19:17968163-17968380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               88, 93
               

               Conread position:
               141-255
               

               Cow position:
               chr19:24140432-24140546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               347-638
               

               Cow position:
               chr19:36263350-36263064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               100, 80
               

               Conread position:
               44-255
               

               Cow position:
               chr2:64204398-64204608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               46, 21
               

               Conread position:
               78-248
               

               Cow position:
               chr2:24940481-24940314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               79-196
               

               Cow position:
               chr2:40373552-40373436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               80-253
               

               Cow position:
               chr2:6458554-6458730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               94-243
               

               Cow position:
               chr2:33183244-33183392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               94-252
               

               Cow position:
               chr2:59204865-59205016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr2:1661704-1661864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               94-254
               

               Cow position:
               chr2:21474496-21474335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr2:11956533-11956694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr2:14460145-14459986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr2:15691263-15691425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               42, 118
               

               Conread position:
               94-255
               

               Cow position:
               chr2:23042842-23043009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               42, 65
               

               Conread position:
               94-255
               

               Cow position:
               chr2:24055643-24055802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr2:31870478-31870320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr2:43228707-43228867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr2:43936700-43936857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               96, 31
               

               Conread position:
               94-255
               

               Cow position:
               chr2:54055499-54055661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr2:54424826-54424662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               36, 110
               

               Conread position:
               94-255
               

               Cow position:
               chr2:77709277-77709434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr2:80440028-80440189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr2:82683782-82683625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr2:83248359-83248200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr2:86003435-86003592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               94-257
               

               Cow position:
               chr2:72929876-72929714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               94-258
               

               Cow position:
               chr2:34664507-34664344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               94-258
               

               Cow position:
               chr2:46447305-46447142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr2:11625084-11624921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr2:20275174-20275342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr2:21025931-21026100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               114, 96
               

               Conread position:
               94-264
               

               Cow position:
               chr2:58008677-58008511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               94-392
               

               Cow position:
               chr2:14405771-14406084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               128, 95
               

               Conread position:
               94-417
               

               Cow position:
               chr2:16723678-16724017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               39, 168
               

               Conread position:
               94-417
               

               Cow position:
               chr2:29746436-29746114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               33, 116
               

               Conread position:
               94-417
               

               Cow position:
               chr2:49307978-49308298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               215, 57
               

               Conread position:
               94-418
               

               Cow position:
               chr2:3905891-3905554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               237
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               187, 103
               

               Conread position:
               94-418
               

               Cow position:
               chr2:72665478-72665817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               130, 25
               

               Conread position:
               94-629
               

               Cow position:
               chr2:15256938-15256381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               561
               

               Alignm identity:
               358
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               171, 153
               

               Conread position:
               95-264
               

               Cow position:
               chr2:12688093-12687931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               95-417
               

               Cow position:
               chr2:56713996-56713668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               170, 34
               

               Conread position:
               96-242
               

               Cow position:
               chr2:52391107-52390959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               96-251
               

               Cow position:
               chr2:5477827-5477672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               115, 105
               

               Conread position:
               96-255
               

               Cow position:
               chr2:27164014-27163861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr2:55473959-55473799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr2:64221896-64221737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               96-255
               

               Cow position:
               chr2:64505658-64505498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               96-627
               

               Cow position:
               chr2:48795759-48795215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               554
               

               Alignm identity:
               341
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               186, 30
               

               Conread position:
               98-249
               

               Cow position:
               chr2:70934613-70934462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 85
               

               Conread position:
               98-628
               

               Cow position:
               chr2:41783969-41784479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               537
               

               Alignm identity:
               341
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               158, 75
               

               Conread position:
               100-255
               

               Cow position:
               chr2:84489583-84489428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-264
               

               Cow position:
               chr2:84442744-84442902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               102-226
               

               Cow position:
               chr2:62262855-62262978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               102-250
               

               Cow position:
               chr2:76663881-76664024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               102-255
               

               Cow position:
               chr2:1821176-1821026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               103-638
               

               Cow position:
               chr2:14792443-14793006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               573
               

               Alignm identity:
               377
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               148, 157
               

               Conread position:
               104-255
               

               Cow position:
               chr2:54901376-54901526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 79
               

               Conread position:
               105-255
               

               Cow position:
               chr2:8108024-8108174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               93, 7
               

               Conread position:
               105-255
               

               Cow position:
               chr2:77242474-77242624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               71, 78
               

               Conread position:
               106-255
               

               Cow position:
               chr2:25718417-25718564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               21, 10
               

               Conread position:
               106-415
               

               Cow position:
               chr2:72244694-72244376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               139, 213
               

               Conread position:
               114-253
               

               Cow position:
               chr2:57405961-57405827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               132-250
               

               Cow position:
               chr2:10881918-10882035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               134-249
               

               Cow position:
               chr2:35691252-35691137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               134-255
               

               Cow position:
               chr2:4945297-4945174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               274-629
               

               Cow position:
               chr2:63734055-63734406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               82, 122
               

               Conread position:
               73-415
               

               Cow position:
               chr20:2001819-2001476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               90, 14
               

               Conread position:
               79-255
               

               Cow position:
               chr20:42495410-42495238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 58
               

               Conread position:
               92-255
               

               Cow position:
               chr20:15972241-15972401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               94-233
               

               Cow position:
               chr20:8653955-8654094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr20:30039276-30039115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               31, 67
               

               Conread position:
               94-255
               

               Cow position:
               chr20:11887047-11886888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               81, 115
               

               Conread position:
               94-255
               

               Cow position:
               chr20:14032460-14032299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               134
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr20:15226196-15226037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               94-255
               

               Cow position:
               chr20:30145449-30145608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr20:42260768-42260928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               94-417
               

               Cow position:
               chr20:37048328-37048004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               199, 63
               

               Conread position:
               95-254
               

               Cow position:
               chr20:42284541-42284695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               96-251
               

               Cow position:
               chr20:15280310-15280465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               147, 102
               

               Conread position:
               96-418
               

               Cow position:
               chr20:2471570-2471245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               179, 93
               

               Conread position:
               97-255
               

               Cow position:
               chr20:21806996-21806839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               97-255
               

               Cow position:
               chr20:34820188-34820343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               98-249
               

               Cow position:
               chr20:12791724-12791875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-254
               

               Cow position:
               chr20:5676046-5676202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-251
               

               Cow position:
               chr20:12545504-12545352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               133, 28
               

               Conread position:
               101-255
               

               Cow position:
               chr20:34883633-34883479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               106-256
               

               Cow position:
               chr20:17329046-17329195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               84, 32
               

               Conread position:
               107-258
               

               Cow position:
               chr20:23140286-23140136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               108-255
               

               Cow position:
               chr20:31898423-31898571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               117-255
               

               Cow position:
               chr20:29996753-29996616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               119-417
               

               Cow position:
               chr20:8907075-8907383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 141
               

               Conread position:
               121-258
               

               Cow position:
               chr20:4244081-4244220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               414-760
               

               Cow position:
               chr20:25670674-25670325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 65
               

               Conread position:
               79-235
               

               Cow position:
               chr21:34174686-34174530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               122, 13
               

               Conread position:
               94-229
               

               Cow position:
               chr21:2812555-2812420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-252
               

               Cow position:
               chr21:44873166-44873008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               57, 34
               

               Conread position:
               94-255
               

               Cow position:
               chr21:1078817-1078971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr21:9254077-9254235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               98, 70
               

               Conread position:
               94-255
               

               Cow position:
               chr21:9988224-9988064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr21:13090936-13091095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               126, 47
               

               Conread position:
               94-255
               

               Cow position:
               chr21:14153267-14153423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr21:33653393-33653552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr21:35998945-35999104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr21:37613566-37613727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-258
               

               Cow position:
               chr21:20183989-20184156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 50
               

               Conread position:
               94-264
               

               Cow position:
               chr21:47663041-47663208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               95-264
               

               Cow position:
               chr21:26564219-26564056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               96-249
               

               Cow position:
               chr21:17794602-17794452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr21:14745294-14745450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr21:19652508-19652349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr21:21290556-21290400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               96-539
               

               Cow position:
               chr21:28660819-28660365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               300
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               163, 64
               

               Conread position:
               97-255
               

               Cow position:
               chr21:17031578-17031426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               56, 75
               

               Conread position:
               98-255
               

               Cow position:
               chr21:3761940-3761790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr21:45910240-45910083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-379
               

               Cow position:
               chr21:6174779-6175072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               167, 161
               

               Conread position:
               100-255
               

               Cow position:
               chr21:10093732-10093884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               100-255
               

               Cow position:
               chr21:45639335-45639180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               105-417
               

               Cow position:
               chr21:48623457-48623767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               53, 17
               

               Conread position:
               108-253
               

               Cow position:
               chr21:36466185-36466336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               108-255
               

               Cow position:
               chr21:32394010-32393862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               108-255
               

               Cow position:
               chr21:37087345-37087492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               113-258
               

               Cow position:
               chr21:8639362-8639508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               34, 90
               

               Conread position:
               119-255
               

               Cow position:
               chr21:46241583-46241446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               127-629
               

               Cow position:
               chr21:29421623-29422106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               331
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               37, 135
               

               Conread position:
               276-629
               

               Cow position:
               chr21:18998615-18998262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               122, 49
               

               Conread position:
               411-638
               

               Cow position:
               chr21:30391645-30391409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 159
               

               Conread position:
               413-629
               

               Cow position:
               chr21:40285614-40285829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               87, 39
               

               Conread position:
               66-251
               

               Cow position:
               chr22:6927587-6927771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               7, 84
               

               Conread position:
               73-250
               

               Cow position:
               chr22:12446135-12446309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               74, 5
               

               Conread position:
               73-255
               

               Cow position:
               chr22:8592878-8592700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               25, 5
               

               Conread position:
               73-255
               

               Cow position:
               chr22:38317146-38316961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               17, 95
               

               Conread position:
               94-221
               

               Cow position:
               chr22:18527079-18527204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               94-223
               

               Cow position:
               chr22:2884937-2885063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               94-247
               

               Cow position:
               chr22:43093402-43093561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr22:11659131-11658966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               30, 87
               

               Conread position:
               94-255
               

               Cow position:
               chr22:12595256-12595415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr22:19941798-19941638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               120, 94
               

               Conread position:
               94-255
               

               Cow position:
               chr22:47566126-47565963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 28
               

               Conread position:
               94-258
               

               Cow position:
               chr22:652973-652811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               94-416
               

               Cow position:
               chr22:31111153-31111461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               197, 31
               

               Conread position:
               94-417
               

               Cow position:
               chr22:6948001-6948335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               171, 14
               

               Conread position:
               94-418
               

               Cow position:
               chr22:5038326-5038662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               240
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               171, 60
               

               Conread position:
               94-616
               

               Cow position:
               chr22:16677556-16678106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               556
               

               Alignm identity:
               353
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               90, 78
               

               Conread position:
               95-258
               

               Cow position:
               chr22:13864455-13864291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               95-258
               

               Cow position:
               chr22:27203677-27203504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 50
               

               Conread position:
               96-249
               

               Cow position:
               chr22:34016950-34016798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               96-258
               

               Cow position:
               chr22:31154591-31154428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               96-298
               

               Cow position:
               chr22:20931527-20931723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               45, 56
               

               Conread position:
               96-643
               

               Cow position:
               chr22:42840903-42840341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               568
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 31
               

               Conread position:
               97-410
               

               Cow position:
               chr22:41491050-41491369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               168, 87
               

               Conread position:
               100-255
               

               Cow position:
               chr22:44092301-44092151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               108-255
               

               Cow position:
               chr22:23951125-23950981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               116-253
               

               Cow position:
               chr22:44394976-44394838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               116-255
               

               Cow position:
               chr22:37710682-37710544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               85, 23
               

               Conread position:
               274-589
               

               Cow position:
               chr22:12381042-12381356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               54, 91
               

               Conread position:
               274-638
               

               Cow position:
               chr22:40031595-40031963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               106, 124
               

               Conread position:
               411-627
               

               Cow position:
               chr22:34211200-34210984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 79
               

               Conread position:
               413-636
               

               Cow position:
               chr22:35721962-35722186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               36, 73
               

               Conread position:
               94-251
               

               Cow position:
               chr23:33219662-33219817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               117, 104
               

               Conread position:
               94-252
               

               Cow position:
               chr23:13820023-13819865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr23:5741-5582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               151, 90
               

               Conread position:
               94-253
               

               Cow position:
               chr23:38236426-38236269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr23:40581784-40581627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr23:17064885-17064722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr23:17369629-17369788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr23:25338846-25339003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr23:26405453-26405614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               89, 14
               

               Conread position:
               94-255
               

               Cow position:
               chr23:28611178-28611336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               94-258
               

               Cow position:
               chr23:27628102-27628268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               94-294
               

               Cow position:
               chr23:13540041-13540241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               122, 107
               

               Conread position:
               94-413
               

               Cow position:
               chr23:9387400-9387074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               130, 204
               

               Conread position:
               94-421
               

               Cow position:
               chr23:13478685-13478348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               181, 13
               

               Conread position:
               94-629
               

               Cow position:
               chr23:8983742-8983206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               557
               

               Alignm identity:
               364
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               29, 106
               

               Conread position:
               95-254
               

               Cow position:
               chr23:36055815-36055659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               96-417
               

               Cow position:
               chr23:11764794-11765126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               172, 71
               

               Conread position:
               98-245
               

               Cow position:
               chr23:30837844-30837696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               98-249
               

               Cow position:
               chr23:653510-653360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               101-417
               

               Cow position:
               chr23:9083909-9083588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               105-255
               

               Cow position:
               chr23:9238854-9239001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               108-252
               

               Cow position:
               chr23:41201516-41201372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               112-253
               

               Cow position:
               chr23:31385007-31384866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               112-255
               

               Cow position:
               chr23:29005678-29005535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               113-257
               

               Cow position:
               chr23:10816181-10816035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               123-255
               

               Cow position:
               chr23:3210623-3210758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               128-255
               

               Cow position:
               chr23:30753175-30753301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               134-255
               

               Cow position:
               chr23:3887365-3887483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               62-251
               

               Cow position:
               chr24:11937451-11937262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               5, 139
               

               Conread position:
               73-252
               

               Cow position:
               chr24:10574998-10574820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               23, 53
               

               Conread position:
               94-240
               

               Cow position:
               chr24:6223025-6223171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-241
               

               Cow position:
               chr24:14180567-14180420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-249
               

               Cow position:
               chr24:6763186-6763336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               94-249
               

               Cow position:
               chr24:7342500-7342653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               94-249
               

               Cow position:
               chr24:38620286-38620441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               132, 107
               

               Conread position:
               94-253
               

               Cow position:
               chr24:17216388-17216234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr24:38811952-38811796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr24:5539313-5539474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               111, 103
               

               Conread position:
               94-255
               

               Cow position:
               chr24:11957177-11957016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr24:13796367-13796210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr24:16580295-16580454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 99
               

               Conread position:
               94-255
               

               Cow position:
               chr24:30557123-30556961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr24:31185473-31185634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr24:35845450-35845291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr24:39048652-39048487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               21, 42
               

               Conread position:
               94-255
               

               Cow position:
               chr24:41240228-41240384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               94-258
               

               Cow position:
               chr24:39433632-39433473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr24:34482522-34482691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               94-332
               

               Cow position:
               chr24:33012883-33013116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               63, 167
               

               Conread position:
               94-418
               

               Cow position:
               chr24:854326-853995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               91, 13
               

               Conread position:
               94-418
               

               Cow position:
               chr24:5260192-5260532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               22, 162
               

               Conread position:
               94-418
               

               Cow position:
               chr24:21555522-21555855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               188, 94
               

               Conread position:
               94-418
               

               Cow position:
               chr24:40692932-40693247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               206, 95
               

               Conread position:
               94-525
               

               Cow position:
               chr24:20120557-20120112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               289
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               139, 165
               

               Conread position:
               94-606
               

               Cow position:
               chr24:30278234-30278762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               533
               

               Alignm identity:
               329
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               171, 57
               

               Conread position:
               94-628
               

               Cow position:
               chr24:22643415-22643972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               566
               

               Alignm identity:
               367
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               193, 153
               

               Conread position:
               95-255
               

               Cow position:
               chr24:4038929-4039081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               95-255
               

               Cow position:
               chr24:9491787-9491627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-253
               

               Cow position:
               chr24:20326339-20326496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr24:16537215-16537056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr24:26901750-26901910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 83
               

               Conread position:
               96-255
               

               Cow position:
               chr24:42915990-42915833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               96-308
               

               Cow position:
               chr24:33010594-33010382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               147, 37
               

               Conread position:
               96-417
               

               Cow position:
               chr24:6203530-6203862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               139, 49
               

               Conread position:
               97-255
               

               Cow position:
               chr24:28784508-28784666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr24:6054704-6054548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               99-255
               

               Cow position:
               chr24:2717792-2717946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 60
               

               Conread position:
               99-264
               

               Cow position:
               chr24:37454118-37453955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               102-254
               

               Cow position:
               chr24:26278001-26278148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               102-255
               

               Cow position:
               chr24:9306730-9306880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               103-258
               

               Cow position:
               chr24:13000297-13000145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               104-251
               

               Cow position:
               chr24:27607262-27607115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               107-417
               

               Cow position:
               chr24:18381508-18381182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               73, 290
               

               Conread position:
               109-252
               

               Cow position:
               chr24:8023988-8023845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               111-255
               

               Cow position:
               chr24:25719586-25719443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               114-248
               

               Cow position:
               chr24:26223802-26223936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               115-253
               

               Cow position:
               chr24:37432019-37431881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               115-255
               

               Cow position:
               chr24:35579141-35579284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               38, 90
               

               Conread position:
               119-255
               

               Cow position:
               chr24:24272689-24272553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               128-255
               

               Cow position:
               chr24:4821302-4821172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               133-418
               

               Cow position:
               chr24:30391604-30391319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               61, 118
               

               Conread position:
               295-637
               

               Cow position:
               chr24:39433221-39432877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 192
               

               Conread position:
               65-254
               

               Cow position:
               chr25:18666891-18667080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               33, 152
               

               Conread position:
               89-421
               

               Cow position:
               chr25:10165204-10165547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               94-250
               

               Cow position:
               chr25:37231100-37230940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 101
               

               Conread position:
               94-252
               

               Cow position:
               chr25:36096641-36096798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr25:14506546-14506387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               124, 116
               

               Conread position:
               94-254
               

               Cow position:
               chr25:12169670-12169830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-254
               

               Cow position:
               chr25:33206077-33205918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr25:11149431-11149270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-258
               

               Cow position:
               chr25:10554439-10554278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr25:21455986-21456149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               51, 31
               

               Conread position:
               94-605
               

               Cow position:
               chr25:20663218-20663754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               541
               

               Alignm identity:
               341
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               71, 111
               

               Conread position:
               95-253
               

               Cow position:
               chr25:12097518-12097369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               96-234
               

               Cow position:
               chr25:20597691-20597829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-245
               

               Cow position:
               chr25:36695567-36695716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               96, 76
               

               Conread position:
               98-240
               

               Cow position:
               chr25:8015870-8016013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr25:5154953-5154796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-255
               

               Cow position:
               chr25:11635011-11635167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-255
               

               Cow position:
               chr25:24953033-24952880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               102-255
               

               Cow position:
               chr25:29740710-29740557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               104-418
               

               Cow position:
               chr25:2196002-2196312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               161, 197
               

               Conread position:
               111-415
               

               Cow position:
               chr25:29222250-29221939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               90, 34
               

               Conread position:
               132-430
               

               Cow position:
               chr25:24726493-24726803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               143, 157
               

               Conread position:
               157-416
               

               Cow position:
               chr25:18978969-18978706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               108, 33
               

               Conread position:
               272-628
               

               Cow position:
               chr25:36330724-36330364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               115, 83
               

               Conread position:
               274-638
               

               Cow position:
               chr25:12169881-12170248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               245
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               82, 32
               

               Conread position:
               79-249
               

               Cow position:
               chr26:893172-893337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 66
               

               Conread position:
               94-253
               

               Cow position:
               chr26:449984-450143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-254
               

               Cow position:
               chr26:19879905-19880064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               115, 6
               

               Conread position:
               94-255
               

               Cow position:
               chr26:9066527-9066370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr26:15913691-15913851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr26:19562023-19562184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr26:20624130-20623973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr26:31529011-31529169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               86, 47
               

               Conread position:
               94-255
               

               Cow position:
               chr26:32680001-32679837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               94-256
               

               Cow position:
               chr26:4216181-4216019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               59, 67
               

               Conread position:
               94-257
               

               Cow position:
               chr26:25956732-25956893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               94-264
               

               Cow position:
               chr26:32982851-32982682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               153, 78
               

               Conread position:
               94-413
               

               Cow position:
               chr26:28273474-28273148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               172, 48
               

               Conread position:
               94-417
               

               Cow position:
               chr26:18580906-18580569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               172, 165
               

               Conread position:
               94-636
               

               Cow position:
               chr26:17734464-17735010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               559
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 356
               

               Conread position:
               95-258
               

               Cow position:
               chr26:2328384-2328221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               132, 104
               

               Conread position:
               95-629
               

               Cow position:
               chr26:16853546-16853006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               549
               

               Alignm identity:
               346
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               72, 153
               

               Conread position:
               96-224
               

               Cow position:
               chr26:15330903-15330774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr26:25966172-25966331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-631
               

               Cow position:
               chr26:14973390-14972839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               559
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 95
               

               Conread position:
               98-255
               

               Cow position:
               chr26:6736417-6736574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-251
               

               Cow position:
               chr26:11524441-11524592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               146, 111
               

               Conread position:
               102-255
               

               Cow position:
               chr26:24997608-24997455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               107-255
               

               Cow position:
               chr26:2509428-2509281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               121, 70
               

               Conread position:
               111-255
               

               Cow position:
               chr26:34606193-34606049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               112-247
               

               Cow position:
               chr26:28716300-28716167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               127, 86
               

               Conread position:
               114-264
               

               Cow position:
               chr26:5774027-5774177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 146
               

               Conread position:
               116-253
               

               Cow position:
               chr26:30757666-30757531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               129-637
               

               Cow position:
               chr26:30331182-30330661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               526
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 128
               

               Conread position:
               414-630
               

               Cow position:
               chr26:26567768-26567986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               18, 55
               

               Conread position:
               417-635
               

               Cow position:
               chr26:6730961-6731191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               73-332
               

               Cow position:
               chr27:13926155-13926429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               94-252
               

               Cow position:
               chr27:14408481-14408639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               18, 84
               

               Conread position:
               94-255
               

               Cow position:
               chr27:3958023-3958183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr27:12018587-12018426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr27:23574577-23574415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr27:23906817-23906973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               94-258
               

               Cow position:
               chr27:17820049-17820210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               94-265
               

               Cow position:
               chr27:8734827-8734659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               94-418
               

               Cow position:
               chr27:8016273-8016608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               179, 35
               

               Conread position:
               94-418
               

               Cow position:
               chr27:11951164-11951491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               173, 130
               

               Conread position:
               95-251
               

               Cow position:
               chr27:21259833-21259678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               150, 56
               

               Conread position:
               95-252
               

               Cow position:
               chr27:16610569-16610413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               95-255
               

               Cow position:
               chr27:11774310-11774467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               17, 11
               

               Conread position:
               96-255
               

               Cow position:
               chr27:16117419-16117260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr27:617731-617576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr27:14393408-14393565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-255
               

               Cow position:
               chr27:20479969-20479813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               101-255
               

               Cow position:
               chr27:11752801-11752647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               106-255
               

               Cow position:
               chr27:29007590-29007740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               97, 78
               

               Conread position:
               106-265
               

               Cow position:
               chr27:10871595-10871750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               157-332
               

               Cow position:
               chr27:23289472-23289646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               107, 148
               

               Conread position:
               271-629
               

               Cow position:
               chr27:617529-617166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               118, 84
               

               Conread position:
               411-633
               

               Cow position:
               chr27:1801448-1801223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               94-249
               

               Cow position:
               chr28:27723705-27723859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr28:589150-588992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr28:19898965-19898807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr28:344765-344920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr28:12694508-12694668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr28:27804583-27804743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr28:28598974-28599135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-416
               

               Cow position:
               chr28:20542828-20543147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               94-417
               

               Cow position:
               chr28:34094663-34094343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               171, 39
               

               Conread position:
               94-638
               

               Cow position:
               chr28:12684292-12684853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               574
               

               Alignm identity:
               362
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               186, 76
               

               Conread position:
               96-247
               

               Cow position:
               chr28:23094782-23094933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-250
               

               Cow position:
               chr28:5175330-5175176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-252
               

               Cow position:
               chr28:24365554-24365407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr28:34422661-34422822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               104, 29
               

               Conread position:
               96-256
               

               Cow position:
               chr28:22536097-22535939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               96-415
               

               Cow position:
               chr28:10300008-10299692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               135, 182
               

               Conread position:
               96-417
               

               Cow position:
               chr28:17169338-17169019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               196, 41
               

               Conread position:
               96-629
               

               Cow position:
               chr28:22370234-22370787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               568
               

               Alignm identity:
               369
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               208, 57
               

               Conread position:
               97-255
               

               Cow position:
               chr28:8272886-8273044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               101-255
               

               Cow position:
               chr28:7214104-7213949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               158-623
               

               Cow position:
               chr28:15016604-15016112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               323
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               91, 102
               

               Conread position:
               417-638
               

               Cow position:
               chr28:13325473-13325703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               92-255
               

               Cow position:
               chr29:12913880-12914043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               70, 83
               

               Conread position:
               94-196
               

               Cow position:
               chr29:16727221-16727119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-249
               

               Cow position:
               chr29:34287507-34287354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               94-249
               

               Cow position:
               chr29:45804953-45804798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-251
               

               Cow position:
               chr29:23001049-23000893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               151, 95
               

               Conread position:
               94-254
               

               Cow position:
               chr29:1994580-1994733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr29:12575880-12576040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr29:19400349-19400501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr29:37438868-37439026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr29:5363786-5363621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr29:6437705-6437873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr29:25117460-25117290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               137, 107
               

               Conread position:
               94-264
               

               Cow position:
               chr29:39432608-39432446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               94-269
               

               Cow position:
               chr29:42100661-42100829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               154, 59
               

               Conread position:
               94-413
               

               Cow position:
               chr29:33101781-33102122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               6, 162
               

               Conread position:
               94-413
               

               Cow position:
               chr29:35227294-35226979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               171, 165
               

               Conread position:
               94-417
               

               Cow position:
               chr29:3675421-3675755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               171, 9
               

               Conread position:
               94-417
               

               Cow position:
               chr29:5053640-5053306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               171, 9
               

               Conread position:
               94-418
               

               Cow position:
               chr29:27495041-27494703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               35, 95
               

               Conread position:
               94-630
               

               Cow position:
               chr29:10135891-10135338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               557
               

               Alignm identity:
               348
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               197, 96
               

               Conread position:
               96-255
               

               Cow position:
               chr29:39293341-39293179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr29:43997872-43998029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-418
               

               Cow position:
               chr29:320675-320348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               73, 38
               

               Conread position:
               101-255
               

               Cow position:
               chr29:20923330-20923177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               102-254
               

               Cow position:
               chr29:28785157-28785313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               104-255
               

               Cow position:
               chr29:27710617-27710464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               105-257
               

               Cow position:
               chr29:22989733-22989577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               112-249
               

               Cow position:
               chr29:27305858-27305994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               114-418
               

               Cow position:
               chr29:31472009-31471707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               145, 11
               

               Conread position:
               119-257
               

               Cow position:
               chr29:13071636-13071770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               127-255
               

               Cow position:
               chr29:20709926-20710052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               282-643
               

               Cow position:
               chr29:14025518-14025157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               103, 84
               

               Conread position:
               451-636
               

               Cow position:
               chr29:26239887-26239699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               102, 7
               

               Conread position:
               72-412
               

               Cow position:
               chr3:23921160-23920815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 148
               

               Conread position:
               91-255
               

               Cow position:
               chr3:27531138-27530974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-245
               

               Cow position:
               chr3:76139557-76139401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               94-249
               

               Cow position:
               chr3:58104931-58105091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               94-251
               

               Cow position:
               chr3:45368736-45368583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr3:28947219-28947060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr3:64657699-64657858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               120, 35
               

               Conread position:
               94-253
               

               Cow position:
               chr3:69951372-69951530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 84
               

               Conread position:
               94-255
               

               Cow position:
               chr3:14802086-14802249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr3:25169807-25169966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               82, 22
               

               Conread position:
               94-255
               

               Cow position:
               chr3:31524386-31524543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr3:38791401-38791241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr3:39971702-39971541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr3:50107509-50107352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 48
               

               Conread position:
               94-255
               

               Cow position:
               chr3:54680103-54679943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr3:65961528-65961690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               100, 47
               

               Conread position:
               94-255
               

               Cow position:
               chr3:68344585-68344418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr3:45398706-45398874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               53, 18
               

               Conread position:
               94-264
               

               Cow position:
               chr3:66134161-66133992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr3:67997488-67997321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               94-326
               

               Cow position:
               chr3:67282486-67282728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 42
               

               Conread position:
               94-339
               

               Cow position:
               chr3:54119472-54119224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               171, 165
               

               Conread position:
               94-412
               

               Cow position:
               chr3:30335209-30335540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               172, 42
               

               Conread position:
               94-413
               

               Cow position:
               chr3:7109171-7109505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               107, 16
               

               Conread position:
               94-413
               

               Cow position:
               chr3:17709106-17708784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               171, 43
               

               Conread position:
               94-416
               

               Cow position:
               chr3:27690097-27690423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               171, 50
               

               Conread position:
               94-417
               

               Cow position:
               chr3:21652663-21652994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               208, 178
               

               Conread position:
               94-417
               

               Cow position:
               chr3:43483460-43483791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               144, 95
               

               Conread position:
               94-612
               

               Cow position:
               chr3:15201510-15202049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               545
               

               Alignm identity:
               354
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               45, 166
               

               Conread position:
               94-627
               

               Cow position:
               chr3:59465684-59466225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               551
               

               Alignm identity:
               348
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               181, 226
               

               Conread position:
               94-636
               

               Cow position:
               chr3:84964752-84965295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               565
               

               Alignm identity:
               356
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               94-643
               

               Cow position:
               chr3:30366280-30365706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               582
               

               Alignm identity:
               374
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               106, 27
               

               Conread position:
               95-253
               

               Cow position:
               chr3:9780431-9780273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-255
               

               Cow position:
               chr3:43901800-43901961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               84, 77
               

               Conread position:
               96-255
               

               Cow position:
               chr3:46852617-46852774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr3:60620292-60620139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr3:82937165-82937324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-619
               

               Cow position:
               chr3:57968846-57969393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               556
               

               Alignm identity:
               346
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               98-249
               

               Cow position:
               chr3:36727704-36727855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr3:37813274-37813114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-258
               

               Cow position:
               chr3:58443702-58443538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               102-637
               

               Cow position:
               chr3:48997719-48998284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               570
               

               Alignm identity:
               356
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               153, 220
               

               Conread position:
               103-629
               

               Cow position:
               chr3:40108199-40107658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               549
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 156
               

               Conread position:
               105-255
               

               Cow position:
               chr3:14051215-14051364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               105-413
               

               Cow position:
               chr3:30800629-30800314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               186, 27
               

               Conread position:
               118-255
               

               Cow position:
               chr3:21051087-21051224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               122-255
               

               Cow position:
               chr3:46086188-46086321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               125-402
               

               Cow position:
               chr3:81952928-81952643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               167, 63
               

               Conread position:
               130-248
               

               Cow position:
               chr3:76842935-76843052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               136-258
               

               Cow position:
               chr3:33709403-33709522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               139-250
               

               Cow position:
               chr3:47066479-47066369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               141-627
               

               Cow position:
               chr3:42216799-42216286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               519
               

               Alignm identity:
               339
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               126, 366
               

               Conread position:
               277-638
               

               Cow position:
               chr3:56162257-56162615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               136, 80
               

               Conread position:
               66-624
               

               Cow position:
               chr4:8956970-8957561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               595
               

               Alignm identity:
               364
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               72-630
               

               Cow position:
               chr4:47457773-47458317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               568
               

               Alignm identity:
               362
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               108, 90
               

               Conread position:
               73-255
               

               Cow position:
               chr4:27872789-27872610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               57, 23
               

               Conread position:
               92-251
               

               Cow position:
               chr4:51981299-51981456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               153, 5
               

               Conread position:
               92-258
               

               Cow position:
               chr4:58880291-58880125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               48, 93
               

               Conread position:
               94-193
               

               Cow position:
               chr4:59556462-59556363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-219
               

               Cow position:
               chr4:35000126-35000001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-239
               

               Cow position:
               chr4:2670841-2670985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               94-251
               

               Cow position:
               chr4:65142488-65142327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr4:26223231-26223076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 87
               

               Conread position:
               94-255
               

               Cow position:
               chr4:6612713-6612554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr4:9896990-9896825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr4:13468825-13468666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               43, 13
               

               Conread position:
               94-255
               

               Cow position:
               chr4:16246497-16246335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr4:28286823-28286979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr4:31937061-31937217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr4:33295876-33295725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr4:47704681-47704841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 43
               

               Conread position:
               94-255
               

               Cow position:
               chr4:49683074-49682931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr4:7679004-7678840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 108
               

               Conread position:
               94-264
               

               Cow position:
               chr4:35122431-35122272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               94-326
               

               Cow position:
               chr4:61080722-61080957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               94-339
               

               Cow position:
               chr4:10133684-10133929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 102
               

               Conread position:
               94-413
               

               Cow position:
               chr4:14511938-14511609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               171, 22
               

               Conread position:
               94-417
               

               Cow position:
               chr4:39222556-39222889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               141, 22
               

               Conread position:
               94-417
               

               Cow position:
               chr4:42398504-42398173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               107, 12
               

               Conread position:
               94-580
               

               Cow position:
               chr4:44380120-44379608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               518
               

               Alignm identity:
               336
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               94-638
               

               Cow position:
               chr4:34008071-34007495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               582
               

               Alignm identity:
               374
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               94-638
               

               Cow position:
               chr4:54828727-54828167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               356
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               200, 94
               

               Conread position:
               95-255
               

               Cow position:
               chr4:45951928-45952088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               108, 97
               

               Conread position:
               95-417
               

               Cow position:
               chr4:44047002-44047311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               216, 5
               

               Conread position:
               95-636
               

               Cow position:
               chr4:19451418-19450846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               574
               

               Alignm identity:
               372
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               30, 485
               

               Conread position:
               96-249
               

               Cow position:
               chr4:11662844-11662996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               96-249
               

               Cow position:
               chr4:57206085-57206238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr4:11870041-11869881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               15, 153
               

               Conread position:
               96-264
               

               Cow position:
               chr4:43066000-43066161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               96-344
               

               Cow position:
               chr4:38315849-38315599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               204, 196
               

               Conread position:
               96-593
               

               Cow position:
               chr4:40650199-40649671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               533
               

               Alignm identity:
               339
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 66
               

               Conread position:
               98-254
               

               Cow position:
               chr4:61128739-61128585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               98-254
               

               Cow position:
               chr4:66100264-66100112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr4:3720600-3720441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               99-255
               

               Cow position:
               chr4:342620-342464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               106-253
               

               Cow position:
               chr4:35039283-35039135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               106-407
               

               Cow position:
               chr4:34020987-34021296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               153, 24
               

               Conread position:
               111-251
               

               Cow position:
               chr4:9887111-9886970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               111-253
               

               Cow position:
               chr4:1309647-1309789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               111-644
               

               Cow position:
               chr4:19688732-19689286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               563
               

               Alignm identity:
               353
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               149, 169
               

               Conread position:
               115-258
               

               Cow position:
               chr4:46579534-46579674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               116-255
               

               Cow position:
               chr4:23834200-23834341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               117-404
               

               Cow position:
               chr4:60653182-60653465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               148, 142
               

               Conread position:
               118-255
               

               Cow position:
               chr4:29134236-29134100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               120-254
               

               Cow position:
               chr4:58002412-58002546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               122-255
               

               Cow position:
               chr4:58695538-58695406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               125-255
               

               Cow position:
               chr4:18309353-18309483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               128-255
               

               Cow position:
               chr4:12828750-12828878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               132-254
               

               Cow position:
               chr4:50126083-50126203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               133-258
               

               Cow position:
               chr4:7737419-7737544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               134-255
               

               Cow position:
               chr4:66635470-66635348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               278-629
               

               Cow position:
               chr4:6513487-6513823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 96
               

               Conread position:
               287-768
               

               Cow position:
               chr4:54194433-54193950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               69, 203
               

               Conread position:
               413-629
               

               Cow position:
               chr4:23825193-23824976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 64
               

               Conread position:
               413-633
               

               Cow position:
               chr4:40850745-40850965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               128, 65
               

               Conread position:
               419-768
               

               Cow position:
               chr4:66161965-66161612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 14
               

               Conread position:
               420-638
               

               Cow position:
               chr4:29209685-29209909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               475-669
               

               Cow position:
               chr4:21400033-21399839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 165
               

               Conread position:
               73-629
               

               Cow position:
               chr5:48455569-48456139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               583
               

               Alignm identity:
               359
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               19, 5
               

               Conread position:
               79-255
               

               Cow position:
               chr5:13989368-13989192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               91-255
               

               Cow position:
               chr5:74427098-74427262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-207
               

               Cow position:
               chr5:73252837-73252723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               94-248
               

               Cow position:
               chr5:2237869-2237715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-249
               

               Cow position:
               chr5:5393669-5393823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               94-249
               

               Cow position:
               chr5:13410415-13410570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr5:30793393-30793552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr5:9953793-9953635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               27, 36
               

               Conread position:
               94-255
               

               Cow position:
               chr5:12693822-12693984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               39, 97
               

               Conread position:
               94-255
               

               Cow position:
               chr5:14708240-14708398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr5:24640103-24639937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr5:25638484-25638327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               129, 76
               

               Conread position:
               94-255
               

               Cow position:
               chr5:37715039-37714880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr5:42232155-42231997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr5:45168199-45168039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr5:45608833-45608677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr5:73966805-73966641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               139, 77
               

               Conread position:
               94-257
               

               Cow position:
               chr5:41757497-41757657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr5:49153896-49153729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr5:57966089-57965920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr5:62362776-62362946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               143, 166
               

               Conread position:
               94-351
               

               Cow position:
               chr5:68166077-68165813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               62, 169
               

               Conread position:
               94-411
               

               Cow position:
               chr5:63072718-63072407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               229, 57
               

               Conread position:
               94-417
               

               Cow position:
               chr5:5309039-5309370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               94-417
               

               Cow position:
               chr5:11349705-11350039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               181, 27
               

               Conread position:
               94-588
               

               Cow position:
               chr5:36223433-36222944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               315
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               171, 40
               

               Conread position:
               94-629
               

               Cow position:
               chr5:47593658-47593091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               571
               

               Alignm identity:
               362
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               172, 72
               

               Conread position:
               95-249
               

               Cow position:
               chr5:41200555-41200401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-249
               

               Cow position:
               chr5:56677916-56678070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               36, 21
               

               Conread position:
               95-260
               

               Cow position:
               chr5:73141487-73141317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               96-249
               

               Cow position:
               chr5:42202120-42202273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 86
               

               Conread position:
               96-255
               

               Cow position:
               chr5:59034901-59034747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr5:69626441-69626599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               96-407
               

               Cow position:
               chr5:55112798-55113119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               169, 163
               

               Conread position:
               96-417
               

               Cow position:
               chr5:67623694-67624022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               40, 137
               

               Conread position:
               98-237
               

               Cow position:
               chr5:18478983-18479121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               98-249
               

               Cow position:
               chr5:15764966-15765115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               98-253
               

               Cow position:
               chr5:74282850-74282697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr5:42918656-42918495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr5:64615571-64615727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               98-415
               

               Cow position:
               chr5:4438247-4438567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               103, 135
               

               Conread position:
               99-255
               

               Cow position:
               chr5:20775862-20775711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               100-251
               

               Cow position:
               chr5:17887953-17887800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               101-249
               

               Cow position:
               chr5:6064090-6063938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               101-629
               

               Cow position:
               chr5:70289329-70288793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               554
               

               Alignm identity:
               354
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               133, 36
               

               Conread position:
               102-255
               

               Cow position:
               chr5:12327375-12327225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               102-265
               

               Cow position:
               chr5:76049810-76049650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               104-242
               

               Cow position:
               chr5:49070233-49070095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               105-250
               

               Cow position:
               chr5:65418052-65418191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               105-255
               

               Cow position:
               chr5:39468478-39468629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               44, 9
               

               Conread position:
               105-767
               

               Cow position:
               chr5:67423462-67422752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               715
               

               Alignm identity:
               448
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               27, 16
               

               Conread position:
               107-418
               

               Cow position:
               chr5:3562793-3563112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               144, 219
               

               Conread position:
               108-258
               

               Cow position:
               chr5:52497165-52497017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               116-264
               

               Cow position:
               chr5:68531441-68531587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               117-255
               

               Cow position:
               chr5:40709110-40709248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               118-247
               

               Cow position:
               chr5:68487517-68487644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               128-264
               

               Cow position:
               chr5:51943281-51943417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               96, 132
               

               Conread position:
               132-395
               

               Cow position:
               chr5:49817589-49817860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               133, 87
               

               Conread position:
               133-255
               

               Cow position:
               chr5:4191558-4191680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               137-258
               

               Cow position:
               chr5:3632636-3632514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               142-418
               

               Cow position:
               chr5:44635429-44635721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               140, 11
               

               Conread position:
               274-627
               

               Cow position:
               chr5:3562988-3563350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               97, 18
               

               Conread position:
               412-669
               

               Cow position:
               chr5:54171173-54171430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 74
               

               Conread position:
               413-638
               

               Cow position:
               chr5:25637856-25637626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               29, 24
               

               Conread position:
               414-629
               

               Cow position:
               chr5:18881673-18881457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               81, 160
               

               Conread position:
               84-253
               

               Cow position:
               chr6:27138222-27138055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 16
               

               Conread position:
               93-255
               

               Cow position:
               chr6:53133043-53132886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               143, 39
               

               Conread position:
               94-212
               

               Cow position:
               chr6:48669560-48669442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-236
               

               Cow position:
               chr6:48473391-48473534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               94-252
               

               Cow position:
               chr6:14165142-14164987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               94-252
               

               Cow position:
               chr6:38981901-38981744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               94-253
               

               Cow position:
               chr6:49721135-49721296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               94-254
               

               Cow position:
               chr6:30514179-30514340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr6:17172192-17172357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 162
               

               Conread position:
               94-255
               

               Cow position:
               chr6:18462836-18462675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr6:31850362-31850201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr6:66379975-66380134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr6:66514817-66514976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               107, 73
               

               Conread position:
               94-255
               

               Cow position:
               chr6:66519774-66519933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               107, 73
               

               Conread position:
               94-259
               

               Cow position:
               chr6:28337654-28337815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr6:63761962-63761789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               12, 169
               

               Conread position:
               94-270
               

               Cow position:
               chr6:22272760-22272591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               94-405
               

               Cow position:
               chr6:47526988-47527307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               148, 107
               

               Conread position:
               94-409
               

               Cow position:
               chr6:6039536-6039859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               171, 120
               

               Conread position:
               94-413
               

               Cow position:
               chr6:1525821-1526140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               171, 30
               

               Conread position:
               94-417
               

               Cow position:
               chr6:7817267-7817577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               10, 90
               

               Conread position:
               94-417
               

               Cow position:
               chr6:35248405-35248731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               33, 165
               

               Conread position:
               94-417
               

               Cow position:
               chr6:47532385-47532703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               242, 65
               

               Conread position:
               94-421
               

               Cow position:
               chr6:36467722-36468051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               126, 27
               

               Conread position:
               94-629
               

               Cow position:
               chr6:23008488-23007928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               563
               

               Alignm identity:
               356
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               162, 225
               

               Conread position:
               95-255
               

               Cow position:
               chr6:41077525-41077686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               95-258
               

               Cow position:
               chr6:11412717-11412559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               95-535
               

               Cow position:
               chr6:24338711-24339159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 51
               

               Conread position:
               96-244
               

               Cow position:
               chr6:34617173-34617030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               96-249
               

               Cow position:
               chr6:55845528-55845678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr6:26632529-26632377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr6:53380837-53380993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               96-417
               

               Cow position:
               chr6:36826328-36826664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               186, 20
               

               Conread position:
               96-670
               

               Cow position:
               chr6:29503607-29504182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               587
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 106
               

               Conread position:
               98-253
               

               Cow position:
               chr6:54735000-54735157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               98-264
               

               Cow position:
               chr6:26867998-26868163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               119, 115
               

               Conread position:
               98-270
               

               Cow position:
               chr6:38915310-38915481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               98-344
               

               Cow position:
               chr6:54079833-54080083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               145, 101
               

               Conread position:
               100-253
               

               Cow position:
               chr6:46263954-46263805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               100-255
               

               Cow position:
               chr6:23811276-23811431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               106-255
               

               Cow position:
               chr6:18029646-18029499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               85, 37
               

               Conread position:
               108-287
               

               Cow position:
               chr6:34045510-34045688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               167, 98
               

               Conread position:
               113-638
               

               Cow position:
               chr6:3187284-3187839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               556
               

               Alignm identity:
               352
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               117-255
               

               Cow position:
               chr6:65924919-65924782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               118-251
               

               Cow position:
               chr6:4512582-4512716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               132-255
               

               Cow position:
               chr6:15330833-15330952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               140-264
               

               Cow position:
               chr6:55063489-55063609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               146-332
               

               Cow position:
               chr6:29521196-29521379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               89, 100
               

               Conread position:
               157-455
               

               Cow position:
               chr6:53928153-53927842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               116, 102
               

               Conread position:
               35-249
               

               Cow position:
               chr7:58384326-58384108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               15, 56
               

               Conread position:
               66-255
               

               Cow position:
               chr7:59086642-59086831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               7, 64
               

               Conread position:
               78-255
               

               Cow position:
               chr7:42505815-42505993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               94-249
               

               Cow position:
               chr7:25015786-25015632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr7:63121025-63120867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr7:8605329-8605494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               138, 107
               

               Conread position:
               94-255
               

               Cow position:
               chr7:11908093-11908254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr7:25024493-25024333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr7:53018353-53018514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr7:54655880-54655711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr7:61434848-61435007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               117, 60
               

               Conread position:
               94-255
               

               Cow position:
               chr7:67630310-67630148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr7:24963110-24963281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               38, 167
               

               Conread position:
               94-332
               

               Cow position:
               chr7:43303004-43303233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               94-417
               

               Cow position:
               chr7:20768737-20768407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 27
               

               Conread position:
               95-253
               

               Cow position:
               chr7:13649492-13649640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr7:15572312-15572468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               149, 32
               

               Conread position:
               97-249
               

               Cow position:
               chr7:26722236-26722085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               72, 86
               

               Conread position:
               97-255
               

               Cow position:
               chr7:21875844-21875689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               97-255
               

               Cow position:
               chr7:54895410-54895252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-254
               

               Cow position:
               chr7:5890499-5890650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               109, 35
               

               Conread position:
               98-255
               

               Cow position:
               chr7:1548757-1548602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               73, 85
               

               Conread position:
               98-255
               

               Cow position:
               chr7:29373142-29372987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr7:34758044-34758202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               99-241
               

               Cow position:
               chr7:37783193-37783050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               102-253
               

               Cow position:
               chr7:494410-494562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               103-249
               

               Cow position:
               chr7:36687561-36687417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               105-259
               

               Cow position:
               chr7:61082526-61082680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               105, 94
               

               Conread position:
               107-255
               

               Cow position:
               chr7:9190567-9190714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               110-255
               

               Cow position:
               chr7:69083363-69083505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               111-255
               

               Cow position:
               chr7:61358186-61358329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               115-238
               

               Cow position:
               chr7:54295428-54295550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               17, 78
               

               Conread position:
               144-412
               

               Cow position:
               chr7:11168475-11168196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               121, 115
               

               Conread position:
               274-627
               

               Cow position:
               chr7:38254871-38255224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               123, 198
               

               Conread position:
               1-255
               

               Cow position:
               chr8:58635945-58635690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 0
               

               Conread position:
               66-254
               

               Cow position:
               chr8:25135972-25136162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               11, 15
               

               Conread position:
               69-348
               

               Cow position:
               chr8:24671412-24671129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               104, 152
               

               Conread position:
               93-258
               

               Cow position:
               chr8:6820881-6820720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               94-221
               

               Cow position:
               chr8:54170565-54170439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               94-222
               

               Cow position:
               chr8:39635933-39636063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               94-248
               

               Cow position:
               chr8:37240540-37240692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               77, 18
               

               Conread position:
               94-251
               

               Cow position:
               chr8:38895706-38895862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               94-253
               

               Cow position:
               chr8:3088478-3088321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr8:36709659-36709502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr8:11302258-11302420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               110, 94
               

               Conread position:
               94-255
               

               Cow position:
               chr8:25610820-25610659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 97
               

               Conread position:
               94-255
               

               Cow position:
               chr8:31208655-31208491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               102, 26
               

               Conread position:
               94-255
               

               Cow position:
               chr8:37998633-37998469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               76, 9
               

               Conread position:
               94-255
               

               Cow position:
               chr8:45072592-45072754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr8:61576828-61576672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               94-260
               

               Cow position:
               chr8:39619687-39619854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               113, 95
               

               Conread position:
               94-413
               

               Cow position:
               chr8:55736736-55736428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               94-417
               

               Cow position:
               chr8:30105563-30105896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               158, 90
               

               Conread position:
               94-424
               

               Cow position:
               chr8:23927729-23927391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               181, 30
               

               Conread position:
               94-615
               

               Cow position:
               chr8:31197152-31196591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               359
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               141, 119
               

               Conread position:
               94-637
               

               Cow position:
               chr8:42000309-41999751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               572
               

               Alignm identity:
               367
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               222, 18
               

               Conread position:
               94-638
               

               Cow position:
               chr8:10347011-10346454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               362
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               163, 227
               

               Conread position:
               95-768
               

               Cow position:
               chr8:31624888-31625596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               716
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 164
               

               Conread position:
               96-245
               

               Cow position:
               chr8:6096995-6096848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               96-249
               

               Cow position:
               chr8:39576888-39577041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-252
               

               Cow position:
               chr8:53810058-53810213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               40, 98
               

               Conread position:
               96-255
               

               Cow position:
               chr8:5390060-5389898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               96-255
               

               Cow position:
               chr8:49529598-49529433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               96-258
               

               Cow position:
               chr8:20870380-20870218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-264
               

               Cow position:
               chr8:59544854-59544684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               97-253
               

               Cow position:
               chr8:47274961-47274805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-255
               

               Cow position:
               chr8:4494132-4493974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-255
               

               Cow position:
               chr8:25269108-25269265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               102-255
               

               Cow position:
               chr8:5263483-5263331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               102-255
               

               Cow position:
               chr8:18551743-18551593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               105-255
               

               Cow position:
               chr8:11796144-11796292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               111-264
               

               Cow position:
               chr8:5663482-5663328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               117-255
               

               Cow position:
               chr8:37532144-37532282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-417
               

               Cow position:
               chr8:6013577-6013842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               126, 99
               

               Conread position:
               395-632
               

               Cow position:
               chr8:58635041-58634801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               472-628
               

               Cow position:
               chr8:5663103-5662946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 13
               

               Conread position:
               64-255
               

               Cow position:
               chr9:32582372-32582560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               73-252
               

               Cow position:
               chr9:46459896-46459721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               80, 5
               

               Conread position:
               94-220
               

               Cow position:
               chr9:26482306-26482180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-248
               

               Cow position:
               chr9:57815637-57815792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               94-249
               

               Cow position:
               chr9:5880178-5880333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-251
               

               Cow position:
               chr9:11814317-11814163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               149, 86
               

               Conread position:
               94-252
               

               Cow position:
               chr9:55396039-55395882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               94-253
               

               Cow position:
               chr9:30881335-30881490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr9:11090757-11090915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               104, 40
               

               Conread position:
               94-255
               

               Cow position:
               chr9:13982801-13982955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr9:15976177-15976334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr9:24406594-24406756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr9:29373267-29373427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr9:34376149-34375990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr9:48056970-48057132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               94-255
               

               Cow position:
               chr9:49636263-49636428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr9:54787909-54788067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               94-255
               

               Cow position:
               chr9:55314382-55314226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               94-258
               

               Cow position:
               chr9:24871123-24870956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               94-258
               

               Cow position:
               chr9:45849256-45849419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               94-259
               

               Cow position:
               chr9:32805081-32805242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr9:6358023-6357851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               140, 107
               

               Conread position:
               94-264
               

               Cow position:
               chr9:8462025-8461862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               122, 74
               

               Conread position:
               94-264
               

               Cow position:
               chr9:13530757-13530920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               94-264
               

               Cow position:
               chr9:63926168-63926329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               94-368
               

               Cow position:
               chr9:18855503-18855236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               162, 72
               

               Conread position:
               94-417
               

               Cow position:
               chr9:49217469-49217133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               171, 166
               

               Conread position:
               94-588
               

               Cow position:
               chr9:11805468-11804958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               518
               

               Alignm identity:
               331
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               38, 11
               

               Conread position:
               94-638
               

               Cow position:
               chr9:7413839-7414396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               565
               

               Alignm identity:
               356
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               165, 278
               

               Conread position:
               94-638
               

               Cow position:
               chr9:23367680-23367115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               574
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 130
               

               Conread position:
               96-255
               

               Cow position:
               chr9:35747797-35747636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               96-298
               

               Cow position:
               chr9:23851867-23852079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               77, 115
               

               Conread position:
               96-412
               

               Cow position:
               chr9:51592466-51592781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               80, 54
               

               Conread position:
               97-255
               

               Cow position:
               chr9:51760729-51760888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 88
               

               Conread position:
               98-248
               

               Cow position:
               chr9:7125794-7125942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr9:20637784-20637627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-255
               

               Cow position:
               chr9:44234036-44234207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               98-348
               

               Cow position:
               chr9:17035059-17035301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               56, 117
               

               Conread position:
               98-351
               

               Cow position:
               chr9:44372289-44372034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               14, 28
               

               Conread position:
               101-648
               

               Cow position:
               chr9:50230705-50230139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               573
               

               Alignm identity:
               357
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               78, 93
               

               Conread position:
               105-255
               

               Cow position:
               chr9:20767303-20767153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               107-248
               

               Cow position:
               chr9:63686838-63686693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               58, 26
               

               Conread position:
               113-403
               

               Cow position:
               chr9:63955225-63954934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               143, 47
               

               Conread position:
               115-255
               

               Cow position:
               chr9:61661818-61661957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               116-255
               

               Cow position:
               chr9:21735344-21735205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               409-768
               

               Cow position:
               chr9:33157301-33156950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               444-629
               

               Cow position:
               chr9:17798460-17798270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               12, 166
               

               Conread position:
               69-247
               

               Cow position:
               chrX:37943220-37943042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               30, 133
               

               Conread position:
               73-417
               

               Cow position:
               chrX:10457231-10457576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               192, 186
               

               Conread position:
               91-227
               

               Cow position:
               chrX:1964263-1964399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               93-247
               

               Cow position:
               chrX:19400379-19400533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-251
               

               Cow position:
               chrX:18152702-18152546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               94-251
               

               Cow position:
               chrX:24737638-24737795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-251
               

               Cow position:
               chrX:30727541-30727390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               94-252
               

               Cow position:
               chrX:1118046-1117880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               94-252
               

               Cow position:
               chrX:8456816-8456975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               94-253
               

               Cow position:
               chrX:31342754-31342899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               94-254
               

               Cow position:
               chrX:42294657-42294817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chrX:4566373-4566215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               117, 95
               

               Conread position:
               94-255
               

               Cow position:
               chrX:6193776-6193608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               94-255
               

               Cow position:
               chrX:7394119-7393958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chrX:11509622-11509783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-255
               

               Cow position:
               chrX:12852141-12851980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               12, 108
               

               Conread position:
               94-255
               

               Cow position:
               chrX:15379930-15380096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               77, 84
               

               Conread position:
               94-255
               

               Cow position:
               chrX:21973493-21973654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               123, 118
               

               Conread position:
               94-255
               

               Cow position:
               chrX:23831888-23831735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               32, 44
               

               Conread position:
               94-255
               

               Cow position:
               chrX:34115296-34115140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               94-255
               

               Cow position:
               chrX:36891375-36891544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 116
               

               Conread position:
               94-255
               

               Cow position:
               chrX:41114753-41114915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               137
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               94-257
               

               Cow position:
               chrX:16848982-16848822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               94-258
               

               Cow position:
               chrX:24950987-24950826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               94-264
               

               Cow position:
               chrX:10822065-10821898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               94-264
               

               Cow position:
               chrX:31982072-31981903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               94-414
               

               Cow position:
               chrX:23325782-23325450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               94-417
               

               Cow position:
               chrX:15308447-15308112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               234
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               171, 141
               

               Conread position:
               94-418
               

               Cow position:
               chrX:17522663-17522323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               107, 176
               

               Conread position:
               94-628
               

               Cow position:
               chrX:10409531-10408966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               574
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 105
               

               Conread position:
               94-628
               

               Cow position:
               chrX:15574330-15573770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               368
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               181, 59
               

               Conread position:
               94-638
               

               Cow position:
               chrX:6026157-6025588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               368
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               94, 102
               

               Conread position:
               94-643
               

               Cow position:
               chrX:27343025-27343586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 401
               

               Conread position:
               95-232
               

               Cow position:
               chrX:5545558-5545424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               95-629
               

               Cow position:
               chrX:14853610-14853050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               371
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               75, 301
               

               Conread position:
               96-241
               

               Cow position:
               chrX:39383524-39383381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               96-255
               

               Cow position:
               chrX:2569664-2569503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               96-255
               

               Cow position:
               chrX:33172411-33172247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               96-414
               

               Cow position:
               chrX:1960775-1961095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               152, 106
               

               Conread position:
               97-255
               

               Cow position:
               chrX:30152037-30151882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               98-255
               

               Cow position:
               chrX:33003811-33003967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               98-413
               

               Cow position:
               chrX:17064626-17064307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               140, 53
               

               Conread position:
               100-417
               

               Cow position:
               chrX:28855058-28855379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               165, 159
               

               Conread position:
               102-417
               

               Cow position:
               chrX:16530485-16530812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               163, 157
               

               Conread position:
               104-249
               

               Cow position:
               chrX:19595831-19595976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-417
               

               Cow position:
               chrX:11412399-11412696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               144, 138
               

               Conread position:
               128-760
               

               Cow position:
               chrX:3805514-3806162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               657
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 115
               

               Conread position:
               132-253
               

               Cow position:
               chrX:13864900-13865020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               143-638
               

               Cow position:
               chrX:517781-518301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               526
               

               Alignm identity:
               338
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               87, 273
               

               Conread position:
               274-407
               

               Cow position:
               chrX:42294869-42295004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               347-638
               

               Cow position:
               chrX:11509897-11510192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               411-629
               

               Cow position:
               chrX:23470568-23470343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               413-629
               

               Cow position:
               chrX:15313574-15313795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               36, 68
Conread position:	41-249
Cow position:	chr1:30672591-30672802 (view UCSC Genome Browser custom track)
Alignm length:	212
Alignm identity:	141
Alignm E-value:	7e-21
Alignm gaps (pig, cow):	19, 0
Conread position:	73-255
Cow position:	chr1:36528939-36529122 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	149
Alignm E-value:	8.96831e-44
Alignm gaps (pig, cow):	19, 0
Conread position:	73-404
Cow position:	chr1:68334169-68333829 (view UCSC Genome Browser custom track)
Alignm length:	345
Alignm identity:	235
Alignm E-value:	4e-36
Alignm gaps (pig, cow):	20, 189
Conread position:	92-253
Cow position:	chr1:8844208-8844368 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	116
Alignm E-value:	9e-23
Alignm gaps (pig, cow):	5, 0
Conread position:	92-636
Cow position:	chr1:69996003-69996574 (view UCSC Genome Browser custom track)
Alignm length:	579
Alignm identity:	364
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	173, 96
Conread position:	94-216
Cow position:	chr1:50910765-50910643 (view UCSC Genome Browser custom track)
Alignm length:	123
Alignm identity:	98
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	0, 0
Conread position:	94-233
Cow position:	chr1:33172105-33171967 (view UCSC Genome Browser custom track)
Alignm length:	140
Alignm identity:	106
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	103, 0
Conread position:	94-235
Cow position:	chr1:69265450-69265591 (view UCSC Genome Browser custom track)
Alignm length:	143
Alignm identity:	107
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	47, 89
Conread position:	94-246
Cow position:	chr1:87452522-87452371 (view UCSC Genome Browser custom track)
Alignm length:	153
Alignm identity:	121
Alignm E-value:	8e-32
Alignm gaps (pig, cow):	89, 0
Conread position:	94-248
Cow position:	chr1:43428053-43427897 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	118
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	11, 108
Conread position:	94-249
Cow position:	chr1:10888445-10888287 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	123
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	119, 40
Conread position:	94-251
Cow position:	chr1:42770417-42770257 (view UCSC Genome Browser custom track)
Alignm length:	161
Alignm identity:	125
Alignm E-value:	6e-30
Alignm gaps (pig, cow):	10, 0
Conread position:	94-252
Cow position:	chr1:15229441-15229601 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	119
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	119, 31
Conread position:	94-254
Cow position:	chr1:83105616-83105776 (view UCSC Genome Browser custom track)
Alignm length:	161
Alignm identity:	129
Alignm E-value:	1e-36
Alignm gaps (pig, cow):	0, 0
Conread position:	94-255
Cow position:	chr1:6425939-6426100 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	126
Alignm E-value:	3e-33
Alignm gaps (pig, cow):	0, 0
Conread position:	94-258
Cow position:	chr1:9521599-9521434 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	126
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	29, 98
Conread position:	94-261
Cow position:	chr1:3615001-3614834 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	123
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	0, 0
Conread position:	94-417
Cow position:	chr1:13269381-13269046 (view UCSC Genome Browser custom track)
Alignm length:	339
Alignm identity:	224
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	181, 120
Conread position:	94-421
Cow position:	chr1:31969275-31968939 (view UCSC Genome Browser custom track)
Alignm length:	339
Alignm identity:	228
Alignm E-value:	3e-34
Alignm gaps (pig, cow):	171, 94
Conread position:	94-435
Cow position:	chr1:25263361-25263690 (view UCSC Genome Browser custom track)
Alignm length:	345
Alignm identity:	228
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	165, 122