Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8026N16.3
        

               Conread position:
               425-663
               

               Cow position:
               chr1:68371821-68372053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               42, 17
               

               Conread position:
               432-664
               

               Cow position:
               chr1:65775081-65774847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 72
               

               Conread position:
               433-670
               

               Cow position:
               chr1:11606162-11606404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               16, 74
               

               Conread position:
               433-690
               

               Cow position:
               chr1:91819240-91818970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               111, 69
               

               Conread position:
               441-665
               

               Cow position:
               chr1:82904008-82904238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               32, 12
               

               Conread position:
               443-665
               

               Cow position:
               chr1:20957449-20957672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               168, 10
               

               Conread position:
               445-613
               

               Cow position:
               chr1:12585436-12585269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               87, 54
               

               Conread position:
               445-663
               

               Cow position:
               chr1:17086716-17086930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               158, 29
               

               Conread position:
               445-666
               

               Cow position:
               chr1:84278203-84278426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               452-668
               

               Cow position:
               chr1:25859047-25858830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               145, 36
               

               Conread position:
               453-690
               

               Cow position:
               chr1:8220658-8220417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               95, 49
               

               Conread position:
               455-629
               

               Cow position:
               chr1:35706305-35706120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               104, 47
               

               Conread position:
               455-640
               

               Cow position:
               chr1:15527010-15527202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 46
               

               Conread position:
               456-665
               

               Cow position:
               chr1:15192091-15192302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               85, 49
               

               Conread position:
               480-684
               

               Cow position:
               chr1:74535538-74535737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               46, 25
               

               Conread position:
               481-663
               

               Cow position:
               chr1:31323940-31324128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               481-665
               

               Cow position:
               chr1:99069185-99069374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               481-668
               

               Cow position:
               chr1:67999780-67999588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               481-686
               

               Cow position:
               chr1:28879663-28879455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               84, 27
               

               Conread position:
               482-644
               

               Cow position:
               chr1:63050675-63050503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               59, 23
               

               Conread position:
               483-661
               

               Cow position:
               chr1:77186626-77186437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               483-668
               

               Cow position:
               chr1:93813740-93813931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 19
               

               Conread position:
               483-690
               

               Cow position:
               chr1:32663478-32663268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               65, 18
               

               Conread position:
               490-675
               

               Cow position:
               chr1:28821466-28821652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               58, 12
               

               Conread position:
               490-684
               

               Cow position:
               chr1:29256499-29256301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               113, 17
               

               Conread position:
               490-691
               

               Cow position:
               chr1:21015215-21015013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               54, 15
               

               Conread position:
               491-671
               

               Cow position:
               chr1:5238546-5238365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               107, 14
               

               Conread position:
               494-691
               

               Cow position:
               chr1:28041159-28040961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               500-690
               

               Cow position:
               chr1:66211072-66211259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               48, 27
               

               Conread position:
               502-668
               

               Cow position:
               chr1:59766681-59766847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               103, 45
               

               Conread position:
               503-665
               

               Cow position:
               chr1:64632193-64632030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               503-665
               

               Cow position:
               chr1:88636460-88636620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               42, 63
               

               Conread position:
               503-673
               

               Cow position:
               chr1:97645665-97645829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 52
               

               Conread position:
               508-691
               

               Cow position:
               chr1:41289048-41289234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               33, 50
               

               Conread position:
               508-691
               

               Cow position:
               chr1:58600720-58600911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               510-665
               

               Cow position:
               chr1:43114082-43114240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               512-665
               

               Cow position:
               chr1:99217979-99217819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               36, 47
               

               Conread position:
               539-739
               

               Cow position:
               chr1:64498771-64498975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               566-675
               

               Cow position:
               chr1:65155899-65156008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               425-665
               

               Cow position:
               chr10:39482804-39483044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               428-665
               

               Cow position:
               chr10:17963026-17963264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               28, 60
               

               Conread position:
               429-664
               

               Cow position:
               chr10:26812202-26812445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               15, 61
               

               Conread position:
               431-665
               

               Cow position:
               chr10:62626001-62625763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               433-670
               

               Cow position:
               chr10:11445127-11445372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               434-665
               

               Cow position:
               chr10:18321982-18322213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               42, 16
               

               Conread position:
               434-665
               

               Cow position:
               chr10:19180447-19180672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               152, 19
               

               Conread position:
               434-675
               

               Cow position:
               chr10:32617540-32617783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               49, 19
               

               Conread position:
               434-678
               

               Cow position:
               chr10:6338800-6339049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               443-675
               

               Cow position:
               chr10:39065864-39066091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               182, 62
               

               Conread position:
               445-605
               

               Cow position:
               chr10:45877555-45877392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               93, 55
               

               Conread position:
               445-664
               

               Cow position:
               chr10:2272704-2272482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               87, 60
               

               Conread position:
               451-664
               

               Cow position:
               chr10:67843599-67843808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               118, 42
               

               Conread position:
               453-665
               

               Cow position:
               chr10:62846539-62846757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               38, 53
               

               Conread position:
               458-642
               

               Cow position:
               chr10:5110487-5110679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               86, 44
               

               Conread position:
               481-632
               

               Cow position:
               chr10:52747930-52748090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               481-637
               

               Cow position:
               chr10:8079457-8079293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               481-666
               

               Cow position:
               chr10:33241629-33241820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               67, 26
               

               Conread position:
               481-668
               

               Cow position:
               chr10:9087424-9087616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               76, 24
               

               Conread position:
               481-668
               

               Cow position:
               chr10:39511412-39511598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               481-668
               

               Cow position:
               chr10:46741915-46742105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               51, 24
               

               Conread position:
               481-668
               

               Cow position:
               chr10:55844196-55844005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               482-661
               

               Cow position:
               chr10:27263037-27262851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               482-665
               

               Cow position:
               chr10:28252170-28251986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               83, 23
               

               Conread position:
               484-631
               

               Cow position:
               chr10:28168199-28168350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               48, 21
               

               Conread position:
               484-691
               

               Cow position:
               chr10:13787742-13787527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               64, 17
               

               Conread position:
               489-671
               

               Cow position:
               chr10:36927196-36927376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               490-666
               

               Cow position:
               chr10:804329-804509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               105, 17
               

               Conread position:
               490-668
               

               Cow position:
               chr10:17229820-17229636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               58, 15
               

               Conread position:
               503-644
               

               Cow position:
               chr10:31630783-31630635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 124
               

               Conread position:
               503-665
               

               Cow position:
               chr10:47342352-47342521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               46, 164
               

               Conread position:
               508-665
               

               Cow position:
               chr10:49554125-49554286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               58, 119
               

               Conread position:
               508-686
               

               Cow position:
               chr10:26686352-26686171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               42, 49
               

               Conread position:
               519-668
               

               Cow position:
               chr10:33882213-33882065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               527-665
               

               Cow position:
               chr10:9063585-9063726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               527-670
               

               Cow position:
               chr10:2348757-2348614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               540-691
               

               Cow position:
               chr10:46083945-46084103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               23-306
               

               Cow position:
               chr11:34809502-34809211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 147
               

               Conread position:
               426-603
               

               Cow position:
               chr11:64683257-64683081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               60, 27
               

               Conread position:
               430-657
               

               Cow position:
               chr11:37632553-37632318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 75
               

               Conread position:
               432-665
               

               Cow position:
               chr11:60967694-60967464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               112, 75
               

               Conread position:
               434-663
               

               Cow position:
               chr11:49707110-49706881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               114, 19
               

               Conread position:
               441-665
               

               Cow position:
               chr11:3258242-3258033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               441-665
               

               Cow position:
               chr11:35277688-35277911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               11, 67
               

               Conread position:
               444-671
               

               Cow position:
               chr11:70518004-70517764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               100, 24
               

               Conread position:
               445-665
               

               Cow position:
               chr11:33204543-33204773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               76, 60
               

               Conread position:
               445-665
               

               Cow position:
               chr11:75396815-75397032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               150, 60
               

               Conread position:
               445-666
               

               Cow position:
               chr11:38992790-38993011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               101, 60
               

               Conread position:
               453-664
               

               Cow position:
               chr11:6271251-6271038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               459-644
               

               Cow position:
               chr11:3754733-3754920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               95, 46
               

               Conread position:
               472-670
               

               Cow position:
               chr11:81578579-81578782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               72, 30
               

               Conread position:
               476-668
               

               Cow position:
               chr11:60676786-60676979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               54, 29
               

               Conread position:
               480-663
               

               Cow position:
               chr11:30368895-30369077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               481-665
               

               Cow position:
               chr11:20587090-20586902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               481-665
               

               Cow position:
               chr11:72854137-72854327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               60, 24
               

               Conread position:
               481-684
               

               Cow position:
               chr11:29832877-29833083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               481-686
               

               Cow position:
               chr11:1984750-1984552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               481-690
               

               Cow position:
               chr11:20407887-20407674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               51, 24
               

               Conread position:
               482-664
               

               Cow position:
               chr11:41233029-41233218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               68, 25
               

               Conread position:
               482-668
               

               Cow position:
               chr11:41400653-41400455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               483-691
               

               Cow position:
               chr11:209371-209166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               59, 22
               

               Conread position:
               484-681
               

               Cow position:
               chr11:3485924-3486121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               503-665
               

               Cow position:
               chr11:75270210-75270040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               515-668
               

               Cow position:
               chr11:17516946-17517108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               29, 44
               

               Conread position:
               523-670
               

               Cow position:
               chr11:40481190-40481041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               25, 36
               

               Conread position:
               527-668
               

               Cow position:
               chr11:22517403-22517554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               10, 33
               

               Conread position:
               616-863
               

               Cow position:
               chr11:34808109-34807855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 31
               

               Conread position:
               434-665
               

               Cow position:
               chr12:19215717-19215954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 18
               

               Conread position:
               435-609
               

               Cow position:
               chr12:38503825-38503646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               7, 74
               

               Conread position:
               442-649
               

               Cow position:
               chr12:7163551-7163757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               102, 11
               

               Conread position:
               445-625
               

               Cow position:
               chr12:4180385-4180196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               103, 60
               

               Conread position:
               445-665
               

               Cow position:
               chr12:5602058-5602292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               445-665
               

               Cow position:
               chr12:26186556-26186773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               96, 57
               

               Conread position:
               445-667
               

               Cow position:
               chr12:9616554-9616332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               152, 37
               

               Conread position:
               448-665
               

               Cow position:
               chr12:2763906-2764123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               71, 40
               

               Conread position:
               453-665
               

               Cow position:
               chr12:42335712-42335916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               122, 52
               

               Conread position:
               456-664
               

               Cow position:
               chr12:9526287-9526076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               85, 46
               

               Conread position:
               477-668
               

               Cow position:
               chr12:21136356-21136151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               5, 29
               

               Conread position:
               481-665
               

               Cow position:
               chr12:29466249-29466442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 19
               

               Conread position:
               481-665
               

               Cow position:
               chr12:36898936-36899121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               71, 27
               

               Conread position:
               499-677
               

               Cow position:
               chr12:31728105-31727931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 106
               

               Conread position:
               503-686
               

               Cow position:
               chr12:26720847-26720670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               44, 56
               

               Conread position:
               506-665
               

               Cow position:
               chr12:33250150-33250317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               42, 21
               

               Conread position:
               508-664
               

               Cow position:
               chr12:40879833-40879989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               97, 42
               

               Conread position:
               508-665
               

               Cow position:
               chr12:6973601-6973763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               430-675
               

               Cow position:
               chr13:34082498-34082265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               436-670
               

               Cow position:
               chr13:11263144-11263380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               441-660
               

               Cow position:
               chr13:15371955-15371739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               442-668
               

               Cow position:
               chr13:26484882-26484649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               108, 63
               

               Conread position:
               445-629
               

               Cow position:
               chr13:12508073-12507893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               38, 63
               

               Conread position:
               445-663
               

               Cow position:
               chr13:6639776-6639996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               107, 41
               

               Conread position:
               445-665
               

               Cow position:
               chr13:42599207-42598983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               93, 42
               

               Conread position:
               445-675
               

               Cow position:
               chr13:55778619-55778391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               125, 42
               

               Conread position:
               445-686
               

               Cow position:
               chr13:5909255-5909487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               86, 31
               

               Conread position:
               448-622
               

               Cow position:
               chr13:57416079-57415909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               453-675
               

               Cow position:
               chr13:16136253-16136480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               35, 53
               

               Conread position:
               456-665
               

               Cow position:
               chr13:25921513-25921310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               76, 32
               

               Conread position:
               480-665
               

               Cow position:
               chr13:1165698-1165509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               70, 25
               

               Conread position:
               481-644
               

               Cow position:
               chr13:49624012-49623844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               61, 21
               

               Conread position:
               481-645
               

               Cow position:
               chr13:3164960-3164799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               137, 24
               

               Conread position:
               481-657
               

               Cow position:
               chr13:46515546-46515373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               103, 18
               

               Conread position:
               482-649
               

               Cow position:
               chr13:505456-505277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               66, 25
               

               Conread position:
               482-675
               

               Cow position:
               chr13:42780524-42780331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               52, 23
               

               Conread position:
               483-665
               

               Cow position:
               chr13:50531996-50531804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 22
               

               Conread position:
               484-675
               

               Cow position:
               chr13:56916126-56916319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               489-686
               

               Cow position:
               chr13:55458922-55459119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               491-664
               

               Cow position:
               chr13:15788560-15788725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               56, 14
               

               Conread position:
               494-644
               

               Cow position:
               chr13:32788605-32788454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               503-674
               

               Cow position:
               chr13:21292439-21292264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               41, 63
               

               Conread position:
               503-675
               

               Cow position:
               chr13:14824947-14824768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               508-665
               

               Cow position:
               chr13:44586332-44586175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               66, 43
               

               Conread position:
               508-670
               

               Cow position:
               chr13:20296769-20296936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               61, 50
               

               Conread position:
               567-665
               

               Cow position:
               chr13:6187055-6186957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               428-668
               

               Cow position:
               chr14:35033001-35032744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 18
               

               Conread position:
               434-642
               

               Cow position:
               chr14:26590808-26590606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               111, 18
               

               Conread position:
               441-547
               

               Cow position:
               chr14:38999978-39000082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               441-664
               

               Cow position:
               chr14:39302748-39302973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               441-665
               

               Cow position:
               chr14:5404497-5404271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               91, 11
               

               Conread position:
               445-644
               

               Cow position:
               chr14:4527360-4527558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               128, 60
               

               Conread position:
               445-662
               

               Cow position:
               chr14:11562438-11562653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               45, 61
               

               Conread position:
               445-668
               

               Cow position:
               chr14:48215913-48215692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               103, 27
               

               Conread position:
               451-665
               

               Cow position:
               chr14:30502468-30502251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 27
               

               Conread position:
               476-668
               

               Cow position:
               chr14:35365134-35364936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               76, 29
               

               Conread position:
               481-645
               

               Cow position:
               chr14:45748977-45749141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               69, 24
               

               Conread position:
               482-666
               

               Cow position:
               chr14:41318036-41317856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               66, 26
               

               Conread position:
               484-671
               

               Cow position:
               chr14:38066823-38067013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               48, 21
               

               Conread position:
               485-663
               

               Cow position:
               chr14:38892268-38892083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               494-670
               

               Cow position:
               chr14:35271040-35271221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               111, 11
               

               Conread position:
               508-668
               

               Cow position:
               chr14:38062829-38062669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               33, 48
               

               Conread position:
               508-670
               

               Cow position:
               chr14:12785059-12784896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               36, 19
               

               Conread position:
               520-674
               

               Cow position:
               chr14:34216414-34216254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               544-674
               

               Cow position:
               chr14:49717142-49717272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 13
               

               Conread position:
               430-675
               

               Cow position:
               chr15:10829123-10829380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               14, 77
               

               Conread position:
               432-607
               

               Cow position:
               chr15:23776907-23776734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               116, 70
               

               Conread position:
               434-686
               

               Cow position:
               chr15:50202240-50201985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               114, 20
               

               Conread position:
               441-657
               

               Cow position:
               chr15:36363195-36362981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               47, 65
               

               Conread position:
               442-668
               

               Cow position:
               chr15:40300791-40300561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               106, 11
               

               Conread position:
               445-564
               

               Cow position:
               chr15:26066720-26066840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               28, 58
               

               Conread position:
               445-643
               

               Cow position:
               chr15:14373460-14373250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               104, 60
               

               Conread position:
               453-664
               

               Cow position:
               chr15:47771045-47771257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               95, 15
               

               Conread position:
               473-667
               

               Cow position:
               chr15:50251956-50252152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               84, 32
               

               Conread position:
               481-603
               

               Cow position:
               chr15:40939234-40939355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               56, 24
               

               Conread position:
               481-668
               

               Cow position:
               chr15:27395181-27394995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               51, 24
               

               Conread position:
               481-668
               

               Cow position:
               chr15:31408844-31409035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               71, 24
               

               Conread position:
               481-668
               

               Cow position:
               chr15:38540503-38540313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               481-675
               

               Cow position:
               chr15:21367827-21367639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               482-664
               

               Cow position:
               chr15:33154425-33154604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               123, 16
               

               Conread position:
               482-665
               

               Cow position:
               chr15:19783084-19782907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               130, 26
               

               Conread position:
               483-668
               

               Cow position:
               chr15:18664792-18664982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               490-644
               

               Cow position:
               chr15:9741014-9741174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               44, 18
               

               Conread position:
               493-668
               

               Cow position:
               chr15:11649740-11649924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               507-662
               

               Cow position:
               chr15:40347763-40347921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               98, 44
               

               Conread position:
               509-665
               

               Cow position:
               chr15:26444712-26444556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               89, 138
               

               Conread position:
               565-686
               

               Cow position:
               chr15:30042421-30042303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               430-675
               

               Cow position:
               chr16:44753913-44753667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 54
               

               Conread position:
               430-690
               

               Cow position:
               chr16:51805410-51805677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               115, 69
               

               Conread position:
               432-643
               

               Cow position:
               chr16:30039079-30038866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               94, 13
               

               Conread position:
               445-641
               

               Cow position:
               chr16:25933762-25933568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               105, 42
               

               Conread position:
               445-675
               

               Cow position:
               chr16:38332232-38331996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               102, 60
               

               Conread position:
               448-640
               

               Cow position:
               chr16:53270134-53269940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               100, 54
               

               Conread position:
               448-715
               

               Cow position:
               chr16:11044794-11045058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               481-664
               

               Cow position:
               chr16:42338290-42338112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               64, 12
               

               Conread position:
               482-661
               

               Cow position:
               chr16:23639036-23639220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               59, 25
               

               Conread position:
               482-668
               

               Cow position:
               chr16:37364888-37365075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               127, 20
               

               Conread position:
               483-668
               

               Cow position:
               chr16:24890325-24890515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               483-686
               

               Cow position:
               chr16:39398494-39398713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 22
               

               Conread position:
               485-638
               

               Cow position:
               chr16:42287854-42288012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 20
               

               Conread position:
               485-643
               

               Cow position:
               chr16:11354464-11354628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               490-637
               

               Cow position:
               chr16:33149791-33149641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               54, 17
               

               Conread position:
               492-668
               

               Cow position:
               chr16:31732208-31732029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               56, 13
               

               Conread position:
               501-644
               

               Cow position:
               chr16:22769901-22770052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               502-668
               

               Cow position:
               chr16:15318909-15318750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               503-644
               

               Cow position:
               chr16:27807720-27807568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               38, 129
               

               Conread position:
               503-665
               

               Cow position:
               chr16:12729173-12729338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               107, 24
               

               Conread position:
               508-671
               

               Cow position:
               chr16:13816128-13816294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               428-593
               

               Cow position:
               chr17:42357175-42357003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 24
               

               Conread position:
               445-675
               

               Cow position:
               chr17:27989670-27989440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               158, 48
               

               Conread position:
               448-644
               

               Cow position:
               chr17:4807991-4807791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               96, 41
               

               Conread position:
               448-658
               

               Cow position:
               chr17:17558147-17557933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               156, 12
               

               Conread position:
               448-686
               

               Cow position:
               chr17:33402124-33401877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               80, 50
               

               Conread position:
               448-691
               

               Cow position:
               chr17:17568809-17569054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               164, 57
               

               Conread position:
               453-691
               

               Cow position:
               chr17:6859442-6859690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               93, 52
               

               Conread position:
               456-706
               

               Cow position:
               chr17:34753387-34753644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               85, 46
               

               Conread position:
               480-691
               

               Cow position:
               chr17:5192908-5192702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               70, 27
               

               Conread position:
               480-700
               

               Cow position:
               chr17:40090871-40090643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               481-665
               

               Cow position:
               chr17:30493130-30492948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               143, 24
               

               Conread position:
               483-665
               

               Cow position:
               chr17:20010111-20009925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               65, 17
               

               Conread position:
               489-670
               

               Cow position:
               chr17:18837937-18837750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               494-663
               

               Cow position:
               chr17:6873527-6873352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               508-665
               

               Cow position:
               chr17:13503101-13503267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 47
               

               Conread position:
               527-675
               

               Cow position:
               chr17:20474725-20474879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               423-644
               

               Cow position:
               chr18:19304859-19304627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               426-620
               

               Cow position:
               chr18:1579728-1579535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               431-668
               

               Cow position:
               chr18:51555772-51555529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               18, 72
               

               Conread position:
               432-668
               

               Cow position:
               chr18:13354096-13353862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               180, 40
               

               Conread position:
               434-686
               

               Cow position:
               chr18:7661951-7661693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               12, 20
               

               Conread position:
               437-668
               

               Cow position:
               chr18:18792253-18792024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               111, 15
               

               Conread position:
               445-662
               

               Cow position:
               chr18:15860467-15860243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               103, 62
               

               Conread position:
               445-663
               

               Cow position:
               chr18:23724490-23724268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               102, 57
               

               Conread position:
               445-665
               

               Cow position:
               chr18:23382137-23382354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               101, 41
               

               Conread position:
               445-665
               

               Cow position:
               chr18:42562440-42562212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               101, 60
               

               Conread position:
               445-666
               

               Cow position:
               chr18:36882690-36882906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               160, 62
               

               Conread position:
               445-667
               

               Cow position:
               chr18:29657226-29657002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               445-684
               

               Cow position:
               chr18:35461676-35461911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               103, 60
               

               Conread position:
               448-692
               

               Cow position:
               chr18:10636314-10636059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               93, 57
               

               Conread position:
               453-668
               

               Cow position:
               chr18:21248328-21248543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               95, 28
               

               Conread position:
               459-675
               

               Cow position:
               chr18:29611975-29611750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               89, 19
               

               Conread position:
               470-688
               

               Cow position:
               chr18:26510029-26509808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               79, 35
               

               Conread position:
               477-679
               

               Cow position:
               chr18:29784461-29784670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               71, 28
               

               Conread position:
               482-665
               

               Cow position:
               chr18:9138182-9137996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               119, 20
               

               Conread position:
               490-688
               

               Cow position:
               chr18:3995595-3995791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 17
               

               Conread position:
               503-665
               

               Cow position:
               chr18:53284434-53284270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               103, 54
               

               Conread position:
               508-665
               

               Cow position:
               chr18:17765612-17765445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               508-665
               

               Cow position:
               chr18:17816093-17816254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               97, 43
               

               Conread position:
               508-675
               

               Cow position:
               chr18:41934817-41934987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               101, 50
               

               Conread position:
               510-690
               

               Cow position:
               chr18:16447304-16447492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               40, 48
               

               Conread position:
               512-663
               

               Cow position:
               chr18:14718325-14718472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               36, 47
               

               Conread position:
               428-665
               

               Cow position:
               chr19:13465753-13465996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               14, 38
               

               Conread position:
               430-611
               

               Cow position:
               chr19:36489666-36489490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               138, 29
               

               Conread position:
               430-665
               

               Cow position:
               chr19:22764686-22764460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               19, 41
               

               Conread position:
               435-675
               

               Cow position:
               chr19:41839293-41839057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               48, 10
               

               Conread position:
               437-604
               

               Cow position:
               chr19:56067401-56067234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               109, 16
               

               Conread position:
               445-671
               

               Cow position:
               chr19:5378014-5377794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               160, 60
               

               Conread position:
               453-691
               

               Cow position:
               chr19:25891712-25891955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               95, 52
               

               Conread position:
               481-668
               

               Cow position:
               chr19:42210219-42210405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               51, 24
               

               Conread position:
               481-678
               

               Cow position:
               chr19:40965381-40965190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               134, 24
               

               Conread position:
               482-662
               

               Cow position:
               chr19:45703296-45703115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               490-665
               

               Cow position:
               chr19:29986375-29986193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               58, 15
               

               Conread position:
               490-665
               

               Cow position:
               chr19:40880968-40880792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 15
               

               Conread position:
               504-688
               

               Cow position:
               chr19:20063059-20062873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 55
               

               Conread position:
               508-668
               

               Cow position:
               chr19:32843830-32843665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               95, 42
               

               Conread position:
               426-665
               

               Cow position:
               chr2:33012450-33012697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 49
               

               Conread position:
               434-670
               

               Cow position:
               chr2:63776084-63775851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               112, 19
               

               Conread position:
               436-643
               

               Cow position:
               chr2:8615817-8615607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               108, 69
               

               Conread position:
               443-681
               

               Cow position:
               chr2:36320777-36321014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               105, 48
               

               Conread position:
               445-663
               

               Cow position:
               chr2:76013223-76012999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               103, 23
               

               Conread position:
               445-665
               

               Cow position:
               chr2:8364675-8364893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               153, 81
               

               Conread position:
               446-691
               

               Cow position:
               chr2:10798432-10798182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 7
               

               Conread position:
               448-661
               

               Cow position:
               chr2:12537431-12537649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               102, 57
               

               Conread position:
               448-665
               

               Cow position:
               chr2:58682835-58682615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               161, 57
               

               Conread position:
               453-668
               

               Cow position:
               chr2:33530663-33530879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               99, 52
               

               Conread position:
               480-663
               

               Cow position:
               chr2:64104388-64104198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               68, 25
               

               Conread position:
               480-664
               

               Cow position:
               chr2:53353376-53353566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               68, 25
               

               Conread position:
               480-686
               

               Cow position:
               chr2:25402949-25402734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               481-665
               

               Cow position:
               chr2:6322706-6322897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               481-669
               

               Cow position:
               chr2:79449000-79449183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               118, 24
               

               Conread position:
               481-670
               

               Cow position:
               chr2:16138111-16137924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               84, 24
               

               Conread position:
               482-665
               

               Cow position:
               chr2:6351998-6352186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               482-665
               

               Cow position:
               chr2:23935905-23935708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               46, 23
               

               Conread position:
               482-670
               

               Cow position:
               chr2:38087997-38088179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               483-624
               

               Cow position:
               chr2:74085604-74085752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               65, 18
               

               Conread position:
               486-665
               

               Cow position:
               chr2:14921293-14921119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               486-686
               

               Cow position:
               chr2:78105800-78105596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               490-665
               

               Cow position:
               chr2:1148573-1148748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               490-668
               

               Cow position:
               chr2:75845566-75845397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               494-656
               

               Cow position:
               chr2:6609999-6610166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               494-668
               

               Cow position:
               chr2:28011888-28011713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               115, 11
               

               Conread position:
               503-644
               

               Cow position:
               chr2:2876536-2876679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 15
               

               Conread position:
               503-668
               

               Cow position:
               chr2:26421616-26421454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               503-668
               

               Cow position:
               chr2:71595210-71595385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               507-690
               

               Cow position:
               chr2:43312062-43312247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               508-665
               

               Cow position:
               chr2:36881446-36881605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               40, 51
               

               Conread position:
               508-676
               

               Cow position:
               chr2:5075371-5075539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               42, 93
               

               Conread position:
               510-668
               

               Cow position:
               chr2:39519405-39519236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               537-689
               

               Cow position:
               chr2:63193453-63193610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               541-662
               

               Cow position:
               chr2:41146659-41146780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               558-668
               

               Cow position:
               chr2:41603740-41603631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               432-645
               

               Cow position:
               chr20:26855018-26855235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               59, 27
               

               Conread position:
               434-665
               

               Cow position:
               chr20:7796464-7796227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               434-668
               

               Cow position:
               chr20:36758383-36758616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               32, 74
               

               Conread position:
               435-665
               

               Cow position:
               chr20:21500971-21500735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               113, 70
               

               Conread position:
               437-674
               

               Cow position:
               chr20:36929100-36928860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               30, 16
               

               Conread position:
               443-644
               

               Cow position:
               chr20:25405861-25406057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               153, 59
               

               Conread position:
               445-668
               

               Cow position:
               chr20:19271591-19271358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               66, 60
               

               Conread position:
               453-665
               

               Cow position:
               chr20:13684873-13685088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               91, 19
               

               Conread position:
               480-665
               

               Cow position:
               chr20:2973347-2973162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               125, 25
               

               Conread position:
               481-644
               

               Cow position:
               chr20:22656761-22656592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 24
               

               Conread position:
               490-670
               

               Cow position:
               chr20:16991041-16991228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               60, 17
               

               Conread position:
               494-666
               

               Cow position:
               chr20:41317476-41317302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               107, 14
               

               Conread position:
               508-684
               

               Cow position:
               chr20:35892990-35893172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               33, 58
               

               Conread position:
               511-665
               

               Cow position:
               chr20:22865210-22865371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 50
               

               Conread position:
               423-675
               

               Cow position:
               chr21:13455402-13455649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               125, 19
               

               Conread position:
               429-668
               

               Cow position:
               chr21:28148237-28147994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               434-665
               

               Cow position:
               chr21:40214378-40214151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               129, 14
               

               Conread position:
               434-668
               

               Cow position:
               chr21:29868493-29868734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               13, 63
               

               Conread position:
               444-610
               

               Cow position:
               chr21:10796297-10796464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 56
               

               Conread position:
               445-656
               

               Cow position:
               chr21:22744106-22743889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               105, 37
               

               Conread position:
               445-665
               

               Cow position:
               chr21:38926770-38926999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               100, 60
               

               Conread position:
               448-644
               

               Cow position:
               chr21:26869618-26869408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               93, 51
               

               Conread position:
               448-657
               

               Cow position:
               chr21:7169064-7168858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               194, 54
               

               Conread position:
               448-665
               

               Cow position:
               chr21:1721085-1721303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               30, 61
               

               Conread position:
               453-602
               

               Cow position:
               chr21:45963234-45963087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 49
               

               Conread position:
               455-664
               

               Cow position:
               chr21:34415959-34415754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               86, 50
               

               Conread position:
               480-675
               

               Cow position:
               chr21:33196946-33197140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               481-665
               

               Cow position:
               chr21:27199644-27199837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               62, 150
               

               Conread position:
               481-668
               

               Cow position:
               chr21:18082355-18082544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               127, 24
               

               Conread position:
               482-660
               

               Cow position:
               chr21:47730620-47730805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               482-665
               

               Cow position:
               chr21:42906547-42906363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               45, 20
               

               Conread position:
               485-665
               

               Cow position:
               chr21:43037993-43038172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               110, 20
               

               Conread position:
               488-663
               

               Cow position:
               chr21:16336996-16337177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               490-665
               

               Cow position:
               chr21:4261858-4262034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 15
               

               Conread position:
               503-665
               

               Cow position:
               chr21:33973961-33974131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               508-668
               

               Cow position:
               chr21:448446-448282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               37, 57
               

               Conread position:
               508-668
               

               Cow position:
               chr21:49647195-49647032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               40, 19
               

               Conread position:
               527-675
               

               Cow position:
               chr21:27769803-27769652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               34, 116
               

               Conread position:
               426-629
               

               Cow position:
               chr22:23705757-23705958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               122, 76
               

               Conread position:
               428-665
               

               Cow position:
               chr22:27642760-27642529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               113, 14
               

               Conread position:
               431-684
               

               Cow position:
               chr22:39341906-39341647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               112, 21
               

               Conread position:
               434-665
               

               Cow position:
               chr22:25123557-25123788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               92, 19
               

               Conread position:
               435-668
               

               Cow position:
               chr22:25258823-25259060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               9, 72
               

               Conread position:
               441-668
               

               Cow position:
               chr22:4699835-4700065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               100, 12
               

               Conread position:
               441-668
               

               Cow position:
               chr22:43779620-43779844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               104, 12
               

               Conread position:
               453-685
               

               Cow position:
               chr22:17686689-17686449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               91, 25
               

               Conread position:
               479-690
               

               Cow position:
               chr22:19053091-19052872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               480-637
               

               Cow position:
               chr22:24144913-24144749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               481-662
               

               Cow position:
               chr22:45847747-45847554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               481-664
               

               Cow position:
               chr22:10813359-10813530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 24
               

               Conread position:
               481-670
               

               Cow position:
               chr22:10726392-10726204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               481-676
               

               Cow position:
               chr22:26549-26757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               482-668
               

               Cow position:
               chr22:39744840-39744651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               494-665
               

               Cow position:
               chr22:20171198-20171369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               503-644
               

               Cow position:
               chr22:25662733-25662883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               507-663
               

               Cow position:
               chr22:16321700-16321858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               105, 49
               

               Conread position:
               519-662
               

               Cow position:
               chr22:12355208-12355062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 67
               

               Conread position:
               527-665
               

               Cow position:
               chr22:11669125-11669264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 91
               

               Conread position:
               530-668
               

               Cow position:
               chr22:39385330-39385192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 28
               

               Conread position:
               566-698
               

               Cow position:
               chr22:36381175-36381314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               435-632
               

               Cow position:
               chr23:22691713-22691914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               112, 17
               

               Conread position:
               441-656
               

               Cow position:
               chr23:26909370-26909163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 12
               

               Conread position:
               445-657
               

               Cow position:
               chr23:30680331-30680119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               81, 57
               

               Conread position:
               445-665
               

               Cow position:
               chr23:27100580-27100363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               152, 57
               

               Conread position:
               445-668
               

               Cow position:
               chr23:24255503-24255725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               164, 57
               

               Conread position:
               445-690
               

               Cow position:
               chr23:37430767-37430512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               107, 57
               

               Conread position:
               448-665
               

               Cow position:
               chr23:32033760-32033534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               93, 54
               

               Conread position:
               462-631
               

               Cow position:
               chr23:17630295-17630473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               86, 43
               

               Conread position:
               469-644
               

               Cow position:
               chr23:33450522-33450695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               72, 88
               

               Conread position:
               481-660
               

               Cow position:
               chr23:26127927-26127745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               66, 24
               

               Conread position:
               481-663
               

               Cow position:
               chr23:29342191-29342379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 24
               

               Conread position:
               481-665
               

               Cow position:
               chr23:675601-675788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               481-665
               

               Cow position:
               chr23:4558758-4558940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               105, 21
               

               Conread position:
               481-675
               

               Cow position:
               chr23:12946289-12946093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               481-687
               

               Cow position:
               chr23:14556833-14557040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               76, 20
               

               Conread position:
               490-664
               

               Cow position:
               chr23:38354159-38354332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               40, 15
               

               Conread position:
               490-665
               

               Cow position:
               chr23:22985987-22985810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 15
               

               Conread position:
               490-668
               

               Cow position:
               chr23:35133883-35133701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 15
               

               Conread position:
               494-679
               

               Cow position:
               chr23:10683659-10683854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 11
               

               Conread position:
               503-663
               

               Cow position:
               chr23:182912-183071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               101, 47
               

               Conread position:
               510-662
               

               Cow position:
               chr23:26683027-26683187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 37
               

               Conread position:
               528-675
               

               Cow position:
               chr23:29149922-29150070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 29
               

               Conread position:
               444-665
               

               Cow position:
               chr24:24485975-24485747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               88, 9
               

               Conread position:
               448-668
               

               Cow position:
               chr24:32344659-32344440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               84, 53
               

               Conread position:
               448-690
               

               Cow position:
               chr24:33395625-33395865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               96, 57
               

               Conread position:
               451-665
               

               Cow position:
               chr24:27475542-27475764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 57
               

               Conread position:
               456-662
               

               Cow position:
               chr24:26625491-26625702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               23, 55
               

               Conread position:
               481-643
               

               Cow position:
               chr24:27238479-27238643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               481-665
               

               Cow position:
               chr24:39749430-39749234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               67, 23
               

               Conread position:
               481-668
               

               Cow position:
               chr24:31013522-31013334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               481-684
               

               Cow position:
               chr24:26037433-26037643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               82, 26
               

               Conread position:
               494-668
               

               Cow position:
               chr24:34545854-34546036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 72
               

               Conread position:
               494-686
               

               Cow position:
               chr24:889784-889595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               494-686
               

               Cow position:
               chr24:9733904-9733704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               48, 11
               

               Conread position:
               503-644
               

               Cow position:
               chr24:38035544-38035689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               508-665
               

               Cow position:
               chr24:17859944-17859784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               36, 46
               

               Conread position:
               508-665
               

               Cow position:
               chr24:23636586-23636430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               45, 32
               

               Conread position:
               508-674
               

               Cow position:
               chr24:35361898-35362071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 51
               

               Conread position:
               548-688
               

               Cow position:
               chr24:39049983-39050124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               397-690
               

               Cow position:
               chr25:10784372-10784701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 85
               

               Conread position:
               441-668
               

               Cow position:
               chr25:19384697-19384466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 10
               

               Conread position:
               445-610
               

               Cow position:
               chr25:7056206-7056373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               87, 56
               

               Conread position:
               445-637
               

               Cow position:
               chr25:36929534-36929733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               79, 60
               

               Conread position:
               445-665
               

               Cow position:
               chr25:16706343-16706568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               103, 46
               

               Conread position:
               445-708
               

               Cow position:
               chr25:10946150-10946414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               96, 57
               

               Conread position:
               448-668
               

               Cow position:
               chr25:36906067-36906287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               97, 44
               

               Conread position:
               451-665
               

               Cow position:
               chr25:22632991-22633206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               82, 50
               

               Conread position:
               451-670
               

               Cow position:
               chr25:26691887-26691663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               93, 51
               

               Conread position:
               477-664
               

               Cow position:
               chr25:32002326-32002518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               71, 24
               

               Conread position:
               481-656
               

               Cow position:
               chr25:615683-615501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               481-665
               

               Cow position:
               chr25:16087452-16087644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               481-679
               

               Cow position:
               chr25:37684225-37684024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               122, 26
               

               Conread position:
               482-665
               

               Cow position:
               chr25:14283834-14283648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               91, 23
               

               Conread position:
               482-686
               

               Cow position:
               chr25:5657106-5657317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               65, 20
               

               Conread position:
               487-674
               

               Cow position:
               chr25:5766913-5767103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               116, 18
               

               Conread position:
               489-638
               

               Cow position:
               chr25:33543915-33543761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               59, 16
               

               Conread position:
               490-664
               

               Cow position:
               chr25:16472395-16472214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               58, 11
               

               Conread position:
               490-686
               

               Cow position:
               chr25:12506681-12506887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               42, 12
               

               Conread position:
               494-665
               

               Cow position:
               chr25:9565611-9565439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               71, 13
               

               Conread position:
               494-690
               

               Cow position:
               chr25:14961337-14961141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 11
               

               Conread position:
               503-666
               

               Cow position:
               chr25:8457360-8457195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 46
               

               Conread position:
               508-642
               

               Cow position:
               chr25:28895876-28895741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               49, 32
               

               Conread position:
               531-668
               

               Cow position:
               chr25:11389210-11389064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 36
               

               Conread position:
               434-665
               

               Cow position:
               chr26:15970206-15970428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               107, 19
               

               Conread position:
               445-665
               

               Cow position:
               chr26:27794905-27795112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               120, 43
               

               Conread position:
               445-670
               

               Cow position:
               chr26:19748964-19748734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               87, 53
               

               Conread position:
               446-668
               

               Cow position:
               chr26:7122824-7122601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               122, 12
               

               Conread position:
               456-690
               

               Cow position:
               chr26:20303748-20303513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               13, 40
               

               Conread position:
               469-665
               

               Cow position:
               chr26:14348899-14348701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               143, 39
               

               Conread position:
               480-676
               

               Cow position:
               chr26:18945213-18945404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               481-664
               

               Cow position:
               chr26:17097805-17097990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 18
               

               Conread position:
               481-665
               

               Cow position:
               chr26:33860500-33860692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               481-666
               

               Cow position:
               chr26:34696523-34696711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               481-668
               

               Cow position:
               chr26:35170892-35170701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               481-675
               

               Cow position:
               chr26:24227272-24227470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               68, 24
               

               Conread position:
               483-665
               

               Cow position:
               chr26:30731418-30731605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               61, 22
               

               Conread position:
               488-718
               

               Cow position:
               chr26:21625347-21625113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               60, 17
               

               Conread position:
               490-665
               

               Cow position:
               chr26:18956815-18956989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               115, 15
               

               Conread position:
               490-668
               

               Cow position:
               chr26:5529886-5530068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 15
               

               Conread position:
               507-668
               

               Cow position:
               chr26:27206504-27206669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               508-691
               

               Cow position:
               chr26:19500644-19500455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               437-675
               

               Cow position:
               chr27:4064789-4065032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               111, 16
               

               Conread position:
               448-609
               

               Cow position:
               chr27:14242642-14242805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               83, 57
               

               Conread position:
               456-668
               

               Cow position:
               chr27:6099969-6099744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               80, 46
               

               Conread position:
               481-665
               

               Cow position:
               chr27:30596127-30596325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               482-643
               

               Cow position:
               chr27:5469167-5468999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               482-665
               

               Cow position:
               chr27:20132284-20132467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               108, 19
               

               Conread position:
               484-649
               

               Cow position:
               chr27:29484671-29484506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               490-637
               

               Cow position:
               chr27:14376136-14376286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               39, 15
               

               Conread position:
               494-668
               

               Cow position:
               chr27:23323608-23323432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               54, 8
               

               Conread position:
               508-668
               

               Cow position:
               chr27:20559780-20559944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               519-686
               

               Cow position:
               chr27:19785079-19785248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               86, 36
               

               Conread position:
               430-665
               

               Cow position:
               chr28:23665440-23665666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               441-665
               

               Cow position:
               chr28:20111827-20111605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               107, 12
               

               Conread position:
               445-668
               

               Cow position:
               chr28:33200695-33200478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               103, 42
               

               Conread position:
               448-619
               

               Cow position:
               chr28:6855223-6855050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               98, 50
               

               Conread position:
               448-644
               

               Cow position:
               chr28:11874722-11874518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               78, 22
               

               Conread position:
               448-657
               

               Cow position:
               chr28:30309498-30309712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               31, 55
               

               Conread position:
               453-665
               

               Cow position:
               chr28:19294588-19294806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               79, 8
               

               Conread position:
               453-675
               

               Cow position:
               chr28:23180996-23181216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               110, 29
               

               Conread position:
               481-665
               

               Cow position:
               chr28:10069218-10069407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               67, 27
               

               Conread position:
               481-689
               

               Cow position:
               chr28:2407960-2407761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               490-665
               

               Cow position:
               chr28:24563993-24563815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               490-691
               

               Cow position:
               chr28:4066679-4066472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               58, 15
               

               Conread position:
               493-663
               

               Cow position:
               chr28:4118767-4118941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               51, 12
               

               Conread position:
               494-662
               

               Cow position:
               chr28:31371527-31371698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               495-665
               

               Cow position:
               chr28:33854201-33854026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 7
               

               Conread position:
               501-662
               

               Cow position:
               chr28:33212402-33212241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               47, 26
               

               Conread position:
               503-666
               

               Cow position:
               chr28:14064124-14063954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               43, 128
               

               Conread position:
               503-690
               

               Cow position:
               chr28:24192898-24193095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               14, 167
               

               Conread position:
               508-685
               

               Cow position:
               chr28:17212183-17212001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               40, 49
               

               Conread position:
               519-665
               

               Cow position:
               chr28:23163590-23163445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 99
               

               Conread position:
               566-681
               

               Cow position:
               chr28:20811203-20811083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               143-686
               

               Cow position:
               chr29:21798596-21799153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               354
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               83, 103
               

               Conread position:
               429-664
               

               Cow position:
               chr29:16718450-16718210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               103, 21
               

               Conread position:
               430-665
               

               Cow position:
               chr29:26658162-26657926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               445-635
               

               Cow position:
               chr29:28845188-28845381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               159, 57
               

               Conread position:
               445-661
               

               Cow position:
               chr29:25988075-25987852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               99, 63
               

               Conread position:
               453-657
               

               Cow position:
               chr29:6652557-6652766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               91, 49
               

               Conread position:
               453-668
               

               Cow position:
               chr29:12302785-12302557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 53
               

               Conread position:
               453-676
               

               Cow position:
               chr29:12674679-12674449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               96, 7
               

               Conread position:
               477-668
               

               Cow position:
               chr29:4332852-4333039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               97, 28
               

               Conread position:
               481-668
               

               Cow position:
               chr29:14824795-14824988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 24
               

               Conread position:
               481-686
               

               Cow position:
               chr29:33934496-33934697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               483-673
               

               Cow position:
               chr29:24276288-24276480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               65, 24
               

               Conread position:
               484-686
               

               Cow position:
               chr29:24084432-24084227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               120, 21
               

               Conread position:
               503-665
               

               Cow position:
               chr29:34296576-34296408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 150
               

               Conread position:
               515-665
               

               Cow position:
               chr29:29995957-29995809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               428-665
               

               Cow position:
               chr3:83233651-83233416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               8, 32
               

               Conread position:
               434-665
               

               Cow position:
               chr3:28560797-28561033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               18, 75
               

               Conread position:
               434-668
               

               Cow position:
               chr3:33614420-33614657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               189
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               434-674
               

               Cow position:
               chr3:53132394-53132627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               117, 19
               

               Conread position:
               434-684
               

               Cow position:
               chr3:69187108-69187372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               10, 76
               

               Conread position:
               438-665
               

               Cow position:
               chr3:1015418-1015650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               47, 14
               

               Conread position:
               441-668
               

               Cow position:
               chr3:64079758-64079530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               106, 14
               

               Conread position:
               445-602
               

               Cow position:
               chr3:75990799-75990957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               103, 57
               

               Conread position:
               445-610
               

               Cow position:
               chr3:71500382-71500223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               103, 57
               

               Conread position:
               445-665
               

               Cow position:
               chr3:73154830-73155056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               103, 57
               

               Conread position:
               445-668
               

               Cow position:
               chr3:75619069-75618848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               162, 60
               

               Conread position:
               453-691
               

               Cow position:
               chr3:1022120-1022358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               105, 21
               

               Conread position:
               457-665
               

               Cow position:
               chr3:59577608-59577392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               76, 48
               

               Conread position:
               480-664
               

               Cow position:
               chr3:26382352-26382165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               70, 25
               

               Conread position:
               480-665
               

               Cow position:
               chr3:58637132-58637311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               67, 27
               

               Conread position:
               481-644
               

               Cow position:
               chr3:12613821-12613651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               481-663
               

               Cow position:
               chr3:9431194-9431378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               124, 24
               

               Conread position:
               481-665
               

               Cow position:
               chr3:9631558-9631368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               67, 10
               

               Conread position:
               481-665
               

               Cow position:
               chr3:38333546-38333354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               83, 21
               

               Conread position:
               481-668
               

               Cow position:
               chr3:8529110-8528921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               128, 24
               

               Conread position:
               481-669
               

               Cow position:
               chr3:47471285-47471095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               92, 21
               

               Conread position:
               481-688
               

               Cow position:
               chr3:62021830-62021625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               493-644
               

               Cow position:
               chr3:15566459-15566614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 12
               

               Conread position:
               494-647
               

               Cow position:
               chr3:53193034-53193190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               494-665
               

               Cow position:
               chr3:53245949-53245772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               494-668
               

               Cow position:
               chr3:60284260-60284079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               503-690
               

               Cow position:
               chr3:29553041-29552850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               57, 15
               

               Conread position:
               505-702
               

               Cow position:
               chr3:59628129-59627931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 28
               

               Conread position:
               508-655
               

               Cow position:
               chr3:14811346-14811491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               508-663
               

               Cow position:
               chr3:72592866-72592715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               508-665
               

               Cow position:
               chr3:52691222-52691379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               40, 23
               

               Conread position:
               527-665
               

               Cow position:
               chr3:44895774-44895630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               420-665
               

               Cow position:
               chr4:4105784-4106029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               180, 20
               

               Conread position:
               430-665
               

               Cow position:
               chr4:14347102-14347335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 38
               

               Conread position:
               431-665
               

               Cow position:
               chr4:62172411-62172181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               178, 31
               

               Conread position:
               434-665
               

               Cow position:
               chr4:33943660-33943884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               10, 35
               

               Conread position:
               434-668
               

               Cow position:
               chr4:36945746-36945518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               42, 21
               

               Conread position:
               434-690
               

               Cow position:
               chr4:54437472-54437210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               441-665
               

               Cow position:
               chr4:50836094-50836328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               441-665
               

               Cow position:
               chr4:65394136-65394357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               99, 12
               

               Conread position:
               442-686
               

               Cow position:
               chr4:51611366-51611119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               7, 62
               

               Conread position:
               444-665
               

               Cow position:
               chr4:10919419-10919646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               445-668
               

               Cow position:
               chr4:51863777-51863999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               82, 60
               

               Conread position:
               445-669
               

               Cow position:
               chr4:24857327-24857109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               164, 57
               

               Conread position:
               445-680
               

               Cow position:
               chr4:53354127-53353882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               41, 61
               

               Conread position:
               445-686
               

               Cow position:
               chr4:36157062-36157299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               102, 22
               

               Conread position:
               448-663
               

               Cow position:
               chr4:23541022-23540803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               100, 57
               

               Conread position:
               448-668
               

               Cow position:
               chr4:13893083-13892867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               105, 74
               

               Conread position:
               453-664
               

               Cow position:
               chr4:14166952-14166737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               480-668
               

               Cow position:
               chr4:35207353-35207155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               70, 25
               

               Conread position:
               480-675
               

               Cow position:
               chr4:10657911-10657718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 25
               

               Conread position:
               480-675
               

               Cow position:
               chr4:47667960-47668140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               480-680
               

               Cow position:
               chr4:48738118-48738317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               68, 11
               

               Conread position:
               481-629
               

               Cow position:
               chr4:8406649-8406800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               67, 26
               

               Conread position:
               481-644
               

               Cow position:
               chr4:1775758-1775597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               67, 12
               

               Conread position:
               481-668
               

               Cow position:
               chr4:502900-502706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               481-668
               

               Cow position:
               chr4:45005604-45005790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               66, 17
               

               Conread position:
               481-675
               

               Cow position:
               chr4:6274375-6274175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               46, 18
               

               Conread position:
               481-675
               

               Cow position:
               chr4:61682190-61681992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               481-690
               

               Cow position:
               chr4:66666403-66666614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               485-644
               

               Cow position:
               chr4:65337626-65337785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               485-665
               

               Cow position:
               chr4:55541244-55541055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               492-691
               

               Cow position:
               chr4:25862465-25862270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               494-668
               

               Cow position:
               chr4:30419349-30419175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               111, 11
               

               Conread position:
               503-644
               

               Cow position:
               chr4:65166483-65166336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               503-665
               

               Cow position:
               chr4:21882400-21882240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 91
               

               Conread position:
               503-675
               

               Cow position:
               chr4:34439809-34439984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               102, 51
               

               Conread position:
               507-665
               

               Cow position:
               chr4:36709932-36709767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               41, 52
               

               Conread position:
               508-668
               

               Cow position:
               chr4:20524542-20524705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               90, 35
               

               Conread position:
               508-690
               

               Cow position:
               chr4:39842363-39842172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               24, 53
               

               Conread position:
               508-691
               

               Cow position:
               chr4:51217549-51217359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               101, 43
               

               Conread position:
               519-700
               

               Cow position:
               chr4:23438525-23438710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               541-680
               

               Cow position:
               chr4:8869958-8870097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               432-596
               

               Cow position:
               chr5:26365868-26366034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               112, 73
               

               Conread position:
               434-607
               

               Cow position:
               chr5:26990794-26990630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               434-668
               

               Cow position:
               chr5:75321998-75321769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               121, 19
               

               Conread position:
               441-665
               

               Cow position:
               chr5:35612607-35612376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               25, 12
               

               Conread position:
               442-582
               

               Cow position:
               chr5:42469989-42469850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               106, 63
               

               Conread position:
               445-641
               

               Cow position:
               chr5:3103227-3103030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               95, 57
               

               Conread position:
               445-665
               

               Cow position:
               chr5:12177816-12177588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               60, 83
               

               Conread position:
               445-665
               

               Cow position:
               chr5:36808495-36808281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               125, 47
               

               Conread position:
               445-665
               

               Cow position:
               chr5:65092976-65093203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               99, 23
               

               Conread position:
               445-669
               

               Cow position:
               chr5:66878973-66878739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               99, 43
               

               Conread position:
               445-690
               

               Cow position:
               chr5:76079600-76079359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               98, 60
               

               Conread position:
               445-721
               

               Cow position:
               chr5:28860396-28860671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               87, 60
               

               Conread position:
               448-663
               

               Cow position:
               chr5:373497-373279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 59
               

               Conread position:
               448-665
               

               Cow position:
               chr5:53629685-53629910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               453-665
               

               Cow position:
               chr5:24609436-24609224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               85, 15
               

               Conread position:
               453-665
               

               Cow position:
               chr5:71595345-71595132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               134, 52
               

               Conread position:
               453-668
               

               Cow position:
               chr5:8240166-8240393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               95, 52
               

               Conread position:
               453-675
               

               Cow position:
               chr5:65750436-65750656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               91, 52
               

               Conread position:
               455-663
               

               Cow position:
               chr5:7925719-7925921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               86, 47
               

               Conread position:
               481-663
               

               Cow position:
               chr5:20957245-20957060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               127, 21
               

               Conread position:
               481-665
               

               Cow position:
               chr5:29739529-29739719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               76, 21
               

               Conread position:
               481-670
               

               Cow position:
               chr5:29513462-29513648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               122, 14
               

               Conread position:
               481-675
               

               Cow position:
               chr5:54892054-54892237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               481-691
               

               Cow position:
               chr5:36720600-36720396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               76, 24
               

               Conread position:
               482-663
               

               Cow position:
               chr5:71726001-71726190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               63, 23
               

               Conread position:
               482-665
               

               Cow position:
               chr5:48398649-48398839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               482-666
               

               Cow position:
               chr5:32187021-32187207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               62, 23
               

               Conread position:
               486-664
               

               Cow position:
               chr5:35448591-35448774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               493-668
               

               Cow position:
               chr5:10915137-10915322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               503-665
               

               Cow position:
               chr5:25730293-25730125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               43, 50
               

               Conread position:
               507-666
               

               Cow position:
               chr5:28813758-28813590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               46, 155
               

               Conread position:
               508-645
               

               Cow position:
               chr5:45945889-45946024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               40, 105
               

               Conread position:
               508-668
               

               Cow position:
               chr5:21782951-21782784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 50
               

               Conread position:
               430-675
               

               Cow position:
               chr6:12924922-12925171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               433-665
               

               Cow position:
               chr6:28182128-28181895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               441-662
               

               Cow position:
               chr6:53392355-53392133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               107, 11
               

               Conread position:
               445-665
               

               Cow position:
               chr6:12849822-12850047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               99, 60
               

               Conread position:
               445-690
               

               Cow position:
               chr6:1525434-1525686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               76, 43
               

               Conread position:
               448-602
               

               Cow position:
               chr6:8367516-8367360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               100, 57
               

               Conread position:
               448-665
               

               Cow position:
               chr6:35235904-35236126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               100, 57
               

               Conread position:
               448-675
               

               Cow position:
               chr6:35273854-35273623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               78, 54
               

               Conread position:
               452-657
               

               Cow position:
               chr6:138019-138229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               94, 56
               

               Conread position:
               452-660
               

               Cow position:
               chr6:3559428-3559222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               80, 20
               

               Conread position:
               453-665
               

               Cow position:
               chr6:50875493-50875698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               120, 47
               

               Conread position:
               469-609
               

               Cow position:
               chr6:34575378-34575519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               81, 36
               

               Conread position:
               473-665
               

               Cow position:
               chr6:19436627-19436820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               54, 32
               

               Conread position:
               480-664
               

               Cow position:
               chr6:1438090-1437911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               481-610
               

               Cow position:
               chr6:68275234-68275105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               481-665
               

               Cow position:
               chr6:9821227-9821413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               78, 21
               

               Conread position:
               481-665
               

               Cow position:
               chr6:62096152-62096334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               481-668
               

               Cow position:
               chr6:38791236-38791045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               481-688
               

               Cow position:
               chr6:49964771-49964972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               482-644
               

               Cow position:
               chr6:7029409-7029253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               75, 23
               

               Conread position:
               482-663
               

               Cow position:
               chr6:11755559-11755743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               86, 23
               

               Conread position:
               483-663
               

               Cow position:
               chr6:57370330-57370517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               65, 22
               

               Conread position:
               483-664
               

               Cow position:
               chr6:9416461-9416274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               49, 19
               

               Conread position:
               483-665
               

               Cow position:
               chr6:6663779-6663967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               65, 22
               

               Conread position:
               483-668
               

               Cow position:
               chr6:6382436-6382628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               61, 22
               

               Conread position:
               483-668
               

               Cow position:
               chr6:46657603-46657412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               65, 22
               

               Conread position:
               490-665
               

               Cow position:
               chr6:49494267-49494085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               58, 15
               

               Conread position:
               491-665
               

               Cow position:
               chr6:54051228-54051061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               492-675
               

               Cow position:
               chr6:49221616-49221803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               56, 13
               

               Conread position:
               501-675
               

               Cow position:
               chr6:44703931-44703745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               502-665
               

               Cow position:
               chr6:12499556-12499724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               30, 48
               

               Conread position:
               503-662
               

               Cow position:
               chr6:8140372-8140209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               102, 47
               

               Conread position:
               503-665
               

               Cow position:
               chr6:6348635-6348466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               508-675
               

               Cow position:
               chr6:51082579-51082752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               434-690
               

               Cow position:
               chr7:58544595-58544337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               98, 19
               

               Conread position:
               445-668
               

               Cow position:
               chr7:24961173-24961387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               105, 57
               

               Conread position:
               445-674
               

               Cow position:
               chr7:35212502-35212715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               48, 60
               

               Conread position:
               448-676
               

               Cow position:
               chr7:21224023-21224253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               100, 57
               

               Conread position:
               453-693
               

               Cow position:
               chr7:11075205-11075451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 52
               

               Conread position:
               455-675
               

               Cow position:
               chr7:63607529-63607748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               165, 16
               

               Conread position:
               456-668
               

               Cow position:
               chr7:20933160-20933376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 42
               

               Conread position:
               480-665
               

               Cow position:
               chr7:51915938-51916118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               127, 14
               

               Conread position:
               481-630
               

               Cow position:
               chr7:61151274-61151429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               60, 24
               

               Conread position:
               482-644
               

               Cow position:
               chr7:685791-685951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               482-644
               

               Cow position:
               chr7:53495984-53495817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               68, 25
               

               Conread position:
               482-668
               

               Cow position:
               chr7:12444021-12444215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               50, 23
               

               Conread position:
               490-670
               

               Cow position:
               chr7:56686563-56686748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 15
               

               Conread position:
               508-691
               

               Cow position:
               chr7:31622744-31622551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               511-686
               

               Cow position:
               chr7:8270644-8270464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               55, 46
               

               Conread position:
               512-665
               

               Cow position:
               chr7:32548745-32548587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               12, 56
               

               Conread position:
               432-686
               

               Cow position:
               chr8:35150400-35150647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               434-662
               

               Cow position:
               chr8:23393012-23393235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               114, 19
               

               Conread position:
               434-665
               

               Cow position:
               chr8:19616885-19616658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               111, 25
               

               Conread position:
               440-665
               

               Cow position:
               chr8:50922581-50922812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               108, 13
               

               Conread position:
               445-665
               

               Cow position:
               chr8:22941473-22941248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               103, 25
               

               Conread position:
               445-671
               

               Cow position:
               chr8:15640823-15640610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               460-632
               

               Cow position:
               chr8:31267994-31267819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               145, 45
               

               Conread position:
               472-665
               

               Cow position:
               chr8:22996972-22997162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               131, 10
               

               Conread position:
               480-670
               

               Cow position:
               chr8:4984339-4984144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               481-643
               

               Cow position:
               chr8:4291099-4291265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               49, 24
               

               Conread position:
               481-644
               

               Cow position:
               chr8:48418835-48418669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               60, 24
               

               Conread position:
               481-665
               

               Cow position:
               chr8:20924120-20924311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               69, 24
               

               Conread position:
               481-666
               

               Cow position:
               chr8:29810737-29810927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               481-668
               

               Cow position:
               chr8:35287715-35287906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               60, 16
               

               Conread position:
               481-668
               

               Cow position:
               chr8:45457296-45457488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               481-670
               

               Cow position:
               chr8:19153046-19153238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               481-690
               

               Cow position:
               chr8:17215614-17215834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               67, 26
               

               Conread position:
               482-661
               

               Cow position:
               chr8:19678210-19678399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 18
               

               Conread position:
               482-680
               

               Cow position:
               chr8:18897561-18897361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               483-665
               

               Cow position:
               chr8:24206912-24206729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               126, 19
               

               Conread position:
               485-631
               

               Cow position:
               chr8:51501350-51501496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 20
               

               Conread position:
               494-675
               

               Cow position:
               chr8:43166681-43166866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 8
               

               Conread position:
               494-686
               

               Cow position:
               chr8:20807930-20808127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               54, 8
               

               Conread position:
               508-666
               

               Cow position:
               chr8:50036088-50036249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               97, 143
               

               Conread position:
               522-668
               

               Cow position:
               chr8:41032429-41032280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 45
               

               Conread position:
               527-690
               

               Cow position:
               chr8:44285427-44285256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               430-662
               

               Cow position:
               chr9:38755685-38755917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               114, 12
               

               Conread position:
               432-620
               

               Cow position:
               chr9:23866991-23866799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               113, 13
               

               Conread position:
               433-663
               

               Cow position:
               chr9:44688802-44688572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               97, 19
               

               Conread position:
               436-665
               

               Cow position:
               chr9:45376084-45375842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               96, 70
               

               Conread position:
               441-668
               

               Cow position:
               chr9:33247648-33247881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               25, 12
               

               Conread position:
               441-675
               

               Cow position:
               chr9:43325238-43325477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               107, 16
               

               Conread position:
               445-665
               

               Cow position:
               chr9:24111972-24111753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               103, 56
               

               Conread position:
               445-668
               

               Cow position:
               chr9:1499020-1498791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               103, 37
               

               Conread position:
               453-671
               

               Cow position:
               chr9:37256996-37256789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               474-665
               

               Cow position:
               chr9:37409616-37409812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               8, 32
               

               Conread position:
               478-668
               

               Cow position:
               chr9:8077-8263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               70, 27
               

               Conread position:
               480-644
               

               Cow position:
               chr9:30056894-30056727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               123, 25
               

               Conread position:
               480-668
               

               Cow position:
               chr9:10577894-10577706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               125, 25
               

               Conread position:
               480-686
               

               Cow position:
               chr9:55623599-55623388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               70, 30
               

               Conread position:
               481-675
               

               Cow position:
               chr9:52422764-52422569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               111, 24
               

               Conread position:
               481-690
               

               Cow position:
               chr9:4511867-4511660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 24
               

               Conread position:
               483-688
               

               Cow position:
               chr9:37516375-37516170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               65, 19
               

               Conread position:
               487-663
               

               Cow position:
               chr9:53112823-53113008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 18
               

               Conread position:
               494-644
               

               Cow position:
               chr9:29001688-29001531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 11
               

               Conread position:
               494-665
               

               Cow position:
               chr9:26520844-26521016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               503-665
               

               Cow position:
               chr9:46843755-46843913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               503-668
               

               Cow position:
               chr9:12851603-12851431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 55
               

               Conread position:
               504-679
               

               Cow position:
               chr9:27920729-27920903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               44, 23
               

               Conread position:
               507-680
               

               Cow position:
               chr9:14047737-14047557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 48
               

               Conread position:
               508-662
               

               Cow position:
               chr9:29008237-29008398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               47, 40
               

               Conread position:
               508-663
               

               Cow position:
               chr9:14863062-14862906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               94, 45
               

               Conread position:
               510-665
               

               Cow position:
               chr9:38433270-38433110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 143
               

               Conread position:
               533-665
               

               Cow position:
               chr9:7778109-7777976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 34
               

               Conread position:
               431-644
               

               Cow position:
               chrX:2061015-2060807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               117, 21
               

               Conread position:
               433-686
               

               Cow position:
               chrX:10257289-10257554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               115, 19
               

               Conread position:
               434-665
               

               Cow position:
               chrX:20875247-20875017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               441-665
               

               Cow position:
               chrX:13035726-13035951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               442-665
               

               Cow position:
               chrX:16885503-16885726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               102, 11
               

               Conread position:
               444-665
               

               Cow position:
               chrX:1176890-1177124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               104, 26
               

               Conread position:
               448-665
               

               Cow position:
               chrX:36067310-36067086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               17, 41
               

               Conread position:
               449-607
               

               Cow position:
               chrX:4436124-4436279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               98, 56
               

               Conread position:
               481-665
               

               Cow position:
               chrX:21835379-21835564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               75, 21
               

               Conread position:
               481-665
               

               Cow position:
               chrX:28127980-28128168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               481-668
               

               Cow position:
               chrX:11691868-11692059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               67, 26
               

               Conread position:
               485-657
               

               Cow position:
               chrX:3524088-3524265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               490-681
               

               Cow position:
               chrX:2874347-2874541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               494-665
               

               Cow position:
               chrX:16953954-16953778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               494-665
               

               Cow position:
               chrX:39353403-39353231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               110, 13
               

               Conread position:
               494-668
               

               Cow position:
               chrX:4265075-4265256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               506-644
               

               Cow position:
               chrX:11791583-11791439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               54, 59
               

               Conread position:
               508-665
               

               Cow position:
               chrX:37148534-37148693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               40, 50
               

               Conread position:
               508-668
               

               Cow position:
               chrX:25487487-25487332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               42, 51
Conread position:	425-663
Cow position:	chr1:68371821-68372053 (view UCSC Genome Browser custom track)
Alignm length:	247
Alignm identity:	180
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	42, 17
Conread position:	432-664
Cow position:	chr1:65775081-65774847 (view UCSC Genome Browser custom track)
Alignm length:	240
Alignm identity:	175
Alignm E-value:	1e-33
Alignm gaps (pig, cow):	13, 72
Conread position:	433-670
Cow position:	chr1:11606162-11606404 (view UCSC Genome Browser custom track)
Alignm length:	248
Alignm identity:	174
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	16, 74
Conread position:	433-690
Cow position:	chr1:91819240-91818970 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	196
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	111, 69
Conread position:	441-665
Cow position:	chr1:82904008-82904238 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	169
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	32, 12
Conread position:	443-665
Cow position:	chr1:20957449-20957672 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	165
Alignm E-value:	3e-32
Alignm gaps (pig, cow):	168, 10
Conread position:	445-613
Cow position:	chr1:12585436-12585269 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	121
Alignm E-value:	9e-22
Alignm gaps (pig, cow):	87, 54
Conread position:	445-663
Cow position:	chr1:17086716-17086930 (view UCSC Genome Browser custom track)
Alignm length:	224
Alignm identity:	164
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	158, 29
Conread position:	445-666
Cow position:	chr1:84278203-84278426 (view UCSC Genome Browser custom track)
Alignm length:	229
Alignm identity:	161
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	33, 56
Conread position:	452-668
Cow position:	chr1:25859047-25858830 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	167
Alignm E-value:	1e-36
Alignm gaps (pig, cow):	145, 36
Conread position:	453-690
Cow position:	chr1:8220658-8220417 (view UCSC Genome Browser custom track)
Alignm length:	248
Alignm identity:	182
Alignm E-value:	3e-33
Alignm gaps (pig, cow):	95, 49
Conread position:	455-629
Cow position:	chr1:35706305-35706120 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	145
Alignm E-value:	8e-31
Alignm gaps (pig, cow):	104, 47
Conread position:	455-640
Cow position:	chr1:15527010-15527202 (view UCSC Genome Browser custom track)
Alignm length:	195
Alignm identity:	143
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	77, 46
Conread position:	456-665
Cow position:	chr1:15192091-15192302 (view UCSC Genome Browser custom track)
Alignm length:	217
Alignm identity:	159
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	85, 49
Conread position:	480-684
Cow position:	chr1:74535538-74535737 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	157
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	46, 25
Conread position:	481-663
Cow position:	chr1:31323940-31324128 (view UCSC Genome Browser custom track)
Alignm length:	190
Alignm identity:	137
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	67, 24
Conread position:	481-665
Cow position:	chr1:99069185-99069374 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	151
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	63, 26
Conread position:	481-668
Cow position:	chr1:67999780-67999588 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	149
Alignm E-value:	8e-31
Alignm gaps (pig, cow):	67, 24
Conread position:	481-686
Cow position:	chr1:28879663-28879455 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	157
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	84, 27
Conread position:	482-644
Cow position:	chr1:63050675-63050503 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	134
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	59, 23