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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8028P01.5
        

               
Conread position:
               
415-841
               

               
Cow position:
               
chr10:25965844-25966279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
421-786
               

               
Cow position:
               
chr10:49073588-49073209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 145
               

               
Conread position:
               
421-851
               

               
Cow position:
               
chr10:23266243-23266683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
7, 12
               

               
Conread position:
               
432-851
               

               
Cow position:
               
chr10:27250380-27250806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
143, 12
               

               
Conread position:
               
434-787
               

               
Cow position:
               
chr10:69293924-69294281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 187
               

               
Conread position:
               
435-778
               

               
Cow position:
               
chr10:33015209-33014859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
437-785
               

               
Cow position:
               
chr10:13148271-13147932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 86
               

               
Conread position:
               
443-846
               

               
Cow position:
               
chr10:6946210-6945802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
454-850
               

               
Cow position:
               
chr10:33491486-33491893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
457-826
               

               
Cow position:
               
chr10:29675392-29675783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
22, 177
               

               
Conread position:
               
477-850
               

               
Cow position:
               
chr10:43945356-43944977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
42, 116
               

               
Conread position:
               
492-851
               

               
Cow position:
               
chr10:13151027-13151371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
270, 54
               

               
Conread position:
               
501-841
               

               
Cow position:
               
chr10:57050790-57050444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
514-851
               

               
Cow position:
               
chr10:54132319-54132650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 87
               

               
Conread position:
               
622-851
               

               
Cow position:
               
chr10:22363287-22363061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
622-851
               

               
Cow position:
               
chr10:29096573-29096806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
667-846
               

               
Cow position:
               
chr10:41099937-41099754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
667-847
               

               
Cow position:
               
chr10:67499151-67498968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
667-851
               

               
Cow position:
               
chr10:10191837-10192025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 68
               

               
Conread position:
               
667-851
               

               
Cow position:
               
chr10:48304676-48304862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
100, 66
               

               
Conread position:
               
667-851
               

               
Cow position:
               
chr10:58146161-58145970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
670-850
               

               
Cow position:
               
chr10:60927529-60927348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 63
               

               
Conread position:
               
670-851
               

               
Cow position:
               
chr10:48239131-48239316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
671-851
               

               
Cow position:
               
chr10:42294627-42294811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
673-851
               

               
Cow position:
               
chr10:23920690-23920506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
685-844
               

               
Cow position:
               
chr10:10852931-10852769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
419-841
               

               
Cow position:
               
chr11:39558263-39557834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
19, 182
               

               
Conread position:
               
422-849
               

               
Cow position:
               
chr11:77610274-77609854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
443-826
               

               
Cow position:
               
chr11:50157776-50157415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
443-848
               

               
Cow position:
               
chr11:10080678-10080259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 92
               

               
Conread position:
               
451-851
               

               
Cow position:
               
chr11:26754226-26754643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 175
               

               
Conread position:
               
456-848
               

               
Cow position:
               
chr11:9477780-9477379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
456-851
               

               
Cow position:
               
chr11:56705428-56705021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 198
               

               
Conread position:
               
477-763
               

               
Cow position:
               
chr11:18499529-18499809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
506-845
               

               
Cow position:
               
chr11:22321357-22321691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 78
               

               
Conread position:
               
511-850
               

               
Cow position:
               
chr11:84791768-84792112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
64, 111
               

               
Conread position:
               
512-844
               

               
Cow position:
               
chr11:83571861-83571528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 86
               

               
Conread position:
               
636-850
               

               
Cow position:
               
chr11:25815800-25815583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
664-849
               

               
Cow position:
               
chr11:43638422-43638244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
140, 7
               

               
Conread position:
               
665-849
               

               
Cow position:
               
chr11:24000300-24000477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
97, 33
               

               
Conread position:
               
667-850
               

               
Cow position:
               
chr11:59704874-59705060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
667-851
               

               
Cow position:
               
chr11:55737889-55738070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
130, 51
               

               
Conread position:
               
670-848
               

               
Cow position:
               
chr11:22316955-22316778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
672-851
               

               
Cow position:
               
chr11:69113767-69113583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 64
               

               
Conread position:
               
674-851
               

               
Cow position:
               
chr11:44050271-44050093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
90, 59
               

               
Conread position:
               
685-845
               

               
Cow position:
               
chr11:54739192-54739351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 52
               

               
Conread position:
               
415-845
               

               
Cow position:
               
chr12:9090106-9090534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
475-852
               

               
Cow position:
               
chr12:27026144-27025769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
502-851
               

               
Cow position:
               
chr12:14533106-14533441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
530-849
               

               
Cow position:
               
chr12:40800822-40801127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
665-824
               

               
Cow position:
               
chr12:14372856-14372691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
674-849
               

               
Cow position:
               
chr12:40160164-40159984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 70
               

               
Conread position:
               
423-851
               

               
Cow position:
               
chr13:28758840-28759281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
21, 110
               

               
Conread position:
               
435-852
               

               
Cow position:
               
chr13:44275165-44274720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
39, 316
               

               
Conread position:
               
436-849
               

               
Cow position:
               
chr13:57203696-57204114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
437-844
               

               
Cow position:
               
chr13:59504069-59503650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
71, 5
               

               
Conread position:
               
518-851
               

               
Cow position:
               
chr13:50450629-50450282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 87
               

               
Conread position:
               
541-847
               

               
Cow position:
               
chr13:42019224-42018913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
668-851
               

               
Cow position:
               
chr13:19086343-19086156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 74
               

               
Conread position:
               
670-851
               

               
Cow position:
               
chr13:52272051-52271870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
83, 61
               

               
Conread position:
               
683-851
               

               
Cow position:
               
chr13:57017705-57017874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
121, 42
               

               
Conread position:
               
689-848
               

               
Cow position:
               
chr13:41200964-41201125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
401-843
               

               
Cow position:
               
chr14:25069763-25070203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
413-851
               

               
Cow position:
               
chr14:3948679-3948225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 167
               

               
Conread position:
               
420-727
               

               
Cow position:
               
chr14:8505610-8505912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
12, 114
               

               
Conread position:
               
434-850
               

               
Cow position:
               
chr14:39927017-39927451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 205
               

               
Conread position:
               
435-850
               

               
Cow position:
               
chr14:19120531-19120101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
44, 151
               

               
Conread position:
               
477-836
               

               
Cow position:
               
chr14:41198391-41198757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
40, 115
               

               
Conread position:
               
510-851
               

               
Cow position:
               
chr14:33802812-33803157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 119
               

               
Conread position:
               
665-851
               

               
Cow position:
               
chr14:37132902-37132712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
104, 62
               

               
Conread position:
               
667-849
               

               
Cow position:
               
chr14:33190558-33190745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
680-851
               

               
Cow position:
               
chr14:39545237-39545060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 61
               

               
Conread position:
               
681-852
               

               
Cow position:
               
chr14:14471488-14471312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
415-796
               

               
Cow position:
               
chr15:15643116-15642724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
415-848
               

               
Cow position:
               
chr15:35402903-35402478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
431-851
               

               
Cow position:
               
chr15:3685589-3685150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
434-849
               

               
Cow position:
               
chr15:39628962-39628539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
442-785
               

               
Cow position:
               
chr15:29925981-29926312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
93, 119
               

               
Conread position:
               
525-850
               

               
Cow position:
               
chr15:9247832-9247497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 202
               

               
Conread position:
               
529-851
               

               
Cow position:
               
chr15:24416662-24416337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
95, 57
               

               
Conread position:
               
633-849
               

               
Cow position:
               
chr15:17227057-17227275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
414-850
               

               
Cow position:
               
chr16:31596840-31597265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 65
               

               
Conread position:
               
415-849
               

               
Cow position:
               
chr16:2583410-2583843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
415-851
               

               
Cow position:
               
chr16:15758834-15759269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 187
               

               
Conread position:
               
419-848
               

               
Cow position:
               
chr16:18058290-18058701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
429-850
               

               
Cow position:
               
chr16:22838452-22838026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
430-848
               

               
Cow position:
               
chr16:21864001-21864443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 173
               

               
Conread position:
               
510-851
               

               
Cow position:
               
chr16:29352334-29351990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
65, 99
               

               
Conread position:
               
535-851
               

               
Cow position:
               
chr16:40725117-40725435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
664-851
               

               
Cow position:
               
chr16:49160904-49160712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
97, 72
               

               
Conread position:
               
665-851
               

               
Cow position:
               
chr16:20422861-20423055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
667-847
               

               
Cow position:
               
chr16:53210233-53210048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
712-851
               

               
Cow position:
               
chr16:39460185-39460329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
415-851
               

               
Cow position:
               
chr17:11406405-11405982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
421-844
               

               
Cow position:
               
chr17:29489824-29490243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 190
               

               
Conread position:
               
421-850
               

               
Cow position:
               
chr17:32199485-32199914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
429-842
               

               
Cow position:
               
chr17:34194913-34194479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
447-822
               

               
Cow position:
               
chr17:25851235-25851614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 123
               

               
Conread position:
               
456-851
               

               
Cow position:
               
chr17:37150329-37150727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
55, 147
               

               
Conread position:
               
521-851
               

               
Cow position:
               
chr17:32129926-32130259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 99
               

               
Conread position:
               
543-851
               

               
Cow position:
               
chr17:40581631-40581946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
635-851
               

               
Cow position:
               
chr17:33445806-33446032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
657-850
               

               
Cow position:
               
chr17:37399727-37399929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 5
               

               
Conread position:
               
664-852
               

               
Cow position:
               
chr17:27047298-27047112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 29
               

               
Conread position:
               
666-839
               

               
Cow position:
               
chr17:25824740-25824916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 75
               

               
Conread position:
               
670-849
               

               
Cow position:
               
chr17:30423862-30424035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
670-851
               

               
Cow position:
               
chr17:27084094-27083910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
686-851
               

               
Cow position:
               
chr17:28283214-28283383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
396-851
               

               
Cow position:
               
chr18:28595618-28596094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
16, 123
               

               
Conread position:
               
416-851
               

               
Cow position:
               
chr18:49499243-49499677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
28, 217
               

               
Conread position:
               
422-851
               

               
Cow position:
               
chr18:7556356-7556765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
423-841
               

               
Cow position:
               
chr18:22363402-22363818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 142
               

               
Conread position:
               
437-851
               

               
Cow position:
               
chr18:1968498-1968074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
476-785
               

               
Cow position:
               
chr18:32892930-32893221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 78
               

               
Conread position:
               
513-851
               

               
Cow position:
               
chr18:19567010-19566661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
521-851
               

               
Cow position:
               
chr18:56333436-56333766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
526-848
               

               
Cow position:
               
chr18:4838550-4838224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
534-851
               

               
Cow position:
               
chr18:19294854-19295168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
664-851
               

               
Cow position:
               
chr18:2272780-2272972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
5, 81
               

               
Conread position:
               
666-851
               

               
Cow position:
               
chr18:39425102-39425288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
667-844
               

               
Cow position:
               
chr18:50743270-50743450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
95, 59
               

               
Conread position:
               
667-848
               

               
Cow position:
               
chr18:30719541-30719356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 63
               

               
Conread position:
               
667-850
               

               
Cow position:
               
chr18:48935915-48936089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
667-851
               

               
Cow position:
               
chr18:11652497-11652683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
99, 31
               

               
Conread position:
               
667-851
               

               
Cow position:
               
chr18:49042379-49042575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
669-851
               

               
Cow position:
               
chr18:30785061-30785246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 59
               

               
Conread position:
               
670-850
               

               
Cow position:
               
chr18:18898840-18898657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
95, 58
               

               
Conread position:
               
683-841
               

               
Cow position:
               
chr18:17385601-17385440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 36
               

               
Conread position:
               
684-851
               

               
Cow position:
               
chr18:2260393-2260221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
415-824
               

               
Cow position:
               
chr19:40394487-40394885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
29, 187
               

               
Conread position:
               
421-787
               

               
Cow position:
               
chr19:11409844-11409477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
422-849
               

               
Cow position:
               
chr19:23064154-23064591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
458-834
               

               
Cow position:
               
chr19:22021523-22021151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
521-838
               

               
Cow position:
               
chr19:8500575-8500258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
54, 151
               

               
Conread position:
               
563-850
               

               
Cow position:
               
chr19:30017573-30017293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
664-849
               

               
Cow position:
               
chr19:48936145-48936335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
665-851
               

               
Cow position:
               
chr19:25306801-25306991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
102, 78
               

               
Conread position:
               
670-845
               

               
Cow position:
               
chr19:46088317-46088500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
6, 77
               

               
Conread position:
               
715-849
               

               
Cow position:
               
chr19:42213268-42213132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
411-832
               

               
Cow position:
               
chr20:13402443-13402870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
104, 31
               

               
Conread position:
               
421-851
               

               
Cow position:
               
chr20:24124223-24124638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
141, 180
               

               
Conread position:
               
433-851
               

               
Cow position:
               
chr20:27724326-27724758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
443-848
               

               
Cow position:
               
chr20:1710789-1710403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 147
               

               
Conread position:
               
469-849
               

               
Cow position:
               
chr20:5111999-5112366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
106, 51
               

               
Conread position:
               
476-802
               

               
Cow position:
               
chr20:1856339-1856651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
59, 51
               

               
Conread position:
               
642-851
               

               
Cow position:
               
chr20:26487273-26487066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
664-849
               

               
Cow position:
               
chr20:6176727-6176542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 137
               

               
Conread position:
               
664-851
               

               
Cow position:
               
chr20:5653470-5653277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
666-851
               

               
Cow position:
               
chr20:21472410-21472600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
669-851
               

               
Cow position:
               
chr20:12232351-12232172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
6, 67
               

               
Conread position:
               
679-847
               

               
Cow position:
               
chr20:2160885-2160713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 49
               

               
Conread position:
               
415-841
               

               
Cow position:
               
chr21:9380689-9380263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
417-851
               

               
Cow position:
               
chr21:36170590-36170152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
436-845
               

               
Cow position:
               
chr21:1608546-1608121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
443-851
               

               
Cow position:
               
chr21:1301900-1302322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
490-851
               

               
Cow position:
               
chr21:1064250-1064596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
505-850
               

               
Cow position:
               
chr21:41516522-41516851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
531-851
               

               
Cow position:
               
chr21:24305952-24306284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
641-851
               

               
Cow position:
               
chr21:23885902-23885692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 7
               

               
Conread position:
               
655-850
               

               
Cow position:
               
chr21:30057942-30057743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
101, 57
               

               
Conread position:
               
672-851
               

               
Cow position:
               
chr21:24744339-24744524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
683-851
               

               
Cow position:
               
chr21:14471855-14472027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 60
               

               
Conread position:
               
435-844
               

               
Cow position:
               
chr22:12770035-12770444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 161
               

               
Conread position:
               
491-796
               

               
Cow position:
               
chr22:6970295-6970010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
271, 73
               

               
Conread position:
               
500-851
               

               
Cow position:
               
chr22:33189604-33189249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
27, 124
               

               
Conread position:
               
511-851
               

               
Cow position:
               
chr22:30834934-30835274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
255, 26
               

               
Conread position:
               
531-848
               

               
Cow position:
               
chr22:28872175-28871856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
95, 44
               

               
Conread position:
               
637-834
               

               
Cow position:
               
chr22:21516653-21516855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
659-838
               

               
Cow position:
               
chr22:29823718-29823898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 5
               

               
Conread position:
               
665-851
               

               
Cow position:
               
chr22:42284838-42284647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
6, 128
               

               
Conread position:
               
667-851
               

               
Cow position:
               
chr22:43220064-43220252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 80
               

               
Conread position:
               
416-799
               

               
Cow position:
               
chr23:20945613-20945235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
486-849
               

               
Cow position:
               
chr23:30629164-30629547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 153
               

               
Conread position:
               
487-849
               

               
Cow position:
               
chr23:21421501-21421862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 141
               

               
Conread position:
               
510-851
               

               
Cow position:
               
chr23:36524333-36524680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
539-841
               

               
Cow position:
               
chr23:16524300-16524600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
670-849
               

               
Cow position:
               
chr23:27008277-27008462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
670-849
               

               
Cow position:
               
chr23:28438171-28437985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
671-851
               

               
Cow position:
               
chr23:16509189-16509373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 65
               

               
Conread position:
               
456-838
               

               
Cow position:
               
chr24:18129803-18129413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
56, 165
               

               
Conread position:
               
456-851
               

               
Cow position:
               
chr24:33126491-33126905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
512-848
               

               
Cow position:
               
chr24:41852624-41852956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 84
               

               
Conread position:
               
518-852
               

               
Cow position:
               
chr24:35089343-35089676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
667-848
               

               
Cow position:
               
chr24:18414309-18414126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
89, 70
               

               
Conread position:
               
404-849
               

               
Cow position:
               
chr25:31260276-31260736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 64
               

               
Conread position:
               
415-851
               

               
Cow position:
               
chr25:22299880-22299452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
464-851
               

               
Cow position:
               
chr25:17429320-17428938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
486-849
               

               
Cow position:
               
chr25:5941279-5941656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 129
               

               
Conread position:
               
487-785
               

               
Cow position:
               
chr25:13459891-13459592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
83, 95
               

               
Conread position:
               
490-848
               

               
Cow position:
               
chr25:11346204-11345830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 121
               

               
Conread position:
               
534-851
               

               
Cow position:
               
chr25:28391522-28391199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
664-846
               

               
Cow position:
               
chr25:10875796-10875610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
9, 65
               

               
Conread position:
               
667-845
               

               
Cow position:
               
chr25:4829930-4830110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
104, 33
               

               
Conread position:
               
667-851
               

               
Cow position:
               
chr25:32357608-32357793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
98, 63
               

               
Conread position:
               
670-825
               

               
Cow position:
               
chr25:9690007-9689850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
92, 75
               

               
Conread position:
               
670-851
               

               
Cow position:
               
chr25:7236593-7236779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
672-851
               

               
Cow position:
               
chr25:2246671-2246859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
87, 71
               

               
Conread position:
               
694-851
               

               
Cow position:
               
chr25:9049051-9049203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 34
               

               
Conread position:
               
456-765
               

               
Cow position:
               
chr26:21765523-21765828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
456-850
               

               
Cow position:
               
chr26:21226749-21227163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
56, 86
               

               
Conread position:
               
492-851
               

               
Cow position:
               
chr26:19544075-19543715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 132
               

               
Conread position:
               
536-851
               

               
Cow position:
               
chr26:22586377-22586066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 68
               

               
Conread position:
               
627-851
               

               
Cow position:
               
chr26:18348699-18348468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
672-848
               

               
Cow position:
               
chr26:20479578-20479400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
678-850
               

               
Cow position:
               
chr26:27145088-27145264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
458-851
               

               
Cow position:
               
chr27:9951359-9950987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
563-850
               

               
Cow position:
               
chr27:5000081-4999786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
669-851
               

               
Cow position:
               
chr27:17330388-17330200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 67
               

               
Conread position:
               
683-852
               

               
Cow position:
               
chr27:19853304-19853128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
414-848
               

               
Cow position:
               
chr28:15436589-15437026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 206
               

               
Conread position:
               
437-839
               

               
Cow position:
               
chr28:25974119-25974507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
7, 169
               

               
Conread position:
               
446-848
               

               
Cow position:
               
chr28:24252360-24252777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 180
               

               
Conread position:
               
506-851
               

               
Cow position:
               
chr28:24538460-24538107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
31, 101
               

               
Conread position:
               
664-851
               

               
Cow position:
               
chr28:14132189-14132392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 85
               

               
Conread position:
               
695-847
               

               
Cow position:
               
chr28:24611951-24611792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
27, 44
               

               
Conread position:
               
420-851
               

               
Cow position:
               
chr29:258828-259247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
175, 29
               

               
Conread position:
               
453-851
               

               
Cow position:
               
chr29:11292330-11292734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
108, 137
               

               
Conread position:
               
456-849
               

               
Cow position:
               
chr29:5185815-5185400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
476-791
               

               
Cow position:
               
chr29:16271498-16271822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
519-852
               

               
Cow position:
               
chr29:32201698-32201386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
56, 89
               

               
Conread position:
               
667-849
               

               
Cow position:
               
chr29:17732105-17731919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
95, 59
               

               
Conread position:
               
1-735
               

               
Cow position:
               
chr5:67155036-67155792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
580
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 185
               

               
Conread position:
               
415-846
               

               
Cow position:
               
chr5:29791919-29792352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 188
               

               
Conread position:
               
432-851
               

               
Cow position:
               
chr5:27433769-27434219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 141
               

               
Conread position:
               
442-849
               

               
Cow position:
               
chr5:50558588-50559019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 240
               

               
Conread position:
               
443-851
               

               
Cow position:
               
chr5:44898770-44898361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
456-851
               

               
Cow position:
               
chr5:39426834-39427241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
475-851
               

               
Cow position:
               
chr5:37392232-37391844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 130
               

               
Conread position:
               
476-851
               

               
Cow position:
               
chr5:53920535-53920176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
99, 114
               

               
Conread position:
               
477-849
               

               
Cow position:
               
chr5:29119772-29120133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
506-851
               

               
Cow position:
               
chr5:30271970-30272319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
131, 82
               

               
Conread position:
               
540-851
               

               
Cow position:
               
chr5:67184632-67184942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
544-844
               

               
Cow position:
               
chr5:5422046-5421750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 42
               

               
Conread position:
               
664-845
               

               
Cow position:
               
chr5:46487825-46487640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
664-849
               

               
Cow position:
               
chr5:29155721-29155533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
664-851
               

               
Cow position:
               
chr5:45347883-45347699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
8, 78
               

               
Conread position:
               
667-834
               

               
Cow position:
               
chr5:35629016-35628845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
667-850
               

               
Cow position:
               
chr5:38236243-38236425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 74
               

               
Conread position:
               
667-851
               

               
Cow position:
               
chr5:55159106-55159294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
668-851
               

               
Cow position:
               
chr5:44186771-44186959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
64, 101
               

               
Conread position:
               
670-852
               

               
Cow position:
               
chr5:3667094-3667285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 61
               

               
Conread position:
               
680-851
               

               
Cow position:
               
chr5:64840321-64840146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 47
               

               
Conread position:
               
683-851
               

               
Cow position:
               
chr5:36979716-36979878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
685-851
               

               
Cow position:
               
chr5:9421926-9421755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
76, 98
               

               
Conread position:
               
718-850
               

               
Cow position:
               
chr5:67155969-67156104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
411-841
               

               
Cow position:
               
chr6:5714796-5714365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
31, 41
               

               
Conread position:
               
416-851
               

               
Cow position:
               
chr6:20439965-20439523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
24, 151
               

               
Conread position:
               
421-851
               

               
Cow position:
               
chr6:61459843-61459402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
17, 196
               

               
Conread position:
               
456-851
               

               
Cow position:
               
chr6:15712805-15712412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
458-851
               

               
Cow position:
               
chr6:8628861-8629251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
464-847
               

               
Cow position:
               
chr6:15251716-15251343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
478-785
               

               
Cow position:
               
chr6:24481806-24482110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
664-839
               

               
Cow position:
               
chr6:59942452-59942272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
90, 64
               

               
Conread position:
               
685-845
               

               
Cow position:
               
chr6:5961068-5961228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
118, 67
               

               
Conread position:
               
685-849
               

               
Cow position:
               
chr6:61668235-61668404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
685-851
               

               
Cow position:
               
chr6:10186707-10186879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 52
               

               
Conread position:
               
406-802
               

               
Cow position:
               
chr7:13930332-13929925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
408-848
               

               
Cow position:
               
chr7:26356433-26356001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
409-851
               

               
Cow position:
               
chr7:8377126-8377591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
417-850
               

               
Cow position:
               
chr7:44565654-44565195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
82, 337
               

               
Conread position:
               
498-785
               

               
Cow position:
               
chr7:43453882-43453596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
534-851
               

               
Cow position:
               
chr7:28897814-28898134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 92
               

               
Conread position:
               
541-850
               

               
Cow position:
               
chr7:61086458-61086138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
638-837
               

               
Cow position:
               
chr7:53508763-53508566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
667-838
               

               
Cow position:
               
chr7:3491696-3491871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
667-851
               

               
Cow position:
               
chr7:14521523-14521711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
668-852
               

               
Cow position:
               
chr7:30969492-30969303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
678-818
               

               
Cow position:
               
chr7:3529618-3529475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
690-851
               

               
Cow position:
               
chr7:11858330-11858166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
404-851
               

               
Cow position:
               
chr8:26843868-26844319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
414-851
               

               
Cow position:
               
chr8:45049527-45049109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
30, 51
               

               
Conread position:
               
415-851
               

               
Cow position:
               
chr8:41284477-41284043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
23, 178
               

               
Conread position:
               
421-782
               

               
Cow position:
               
chr8:18920347-18920699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
421-849
               

               
Cow position:
               
chr8:26594580-26594136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
421-851
               

               
Cow position:
               
chr8:36135529-36135954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
443-846
               

               
Cow position:
               
chr8:35351596-35351208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
241, 69
               

               
Conread position:
               
486-847
               

               
Cow position:
               
chr8:49249297-49248961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
512-846
               

               
Cow position:
               
chr8:57739330-57739672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 103
               

               
Conread position:
               
627-851
               

               
Cow position:
               
chr8:35362038-35362257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
638-851
               

               
Cow position:
               
chr8:34576601-34576821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
664-849
               

               
Cow position:
               
chr8:29303194-29303380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
101, 65
               

               
Conread position:
               
664-851
               

               
Cow position:
               
chr8:27730631-27730819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
8, 65
               

               
Conread position:
               
664-851
               

               
Cow position:
               
chr8:56405765-56405950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
667-849
               

               
Cow position:
               
chr8:47894421-47894233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
50, 54
               

               
Conread position:
               
670-851
               

               
Cow position:
               
chr8:51710576-51710765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
675-849
               

               
Cow position:
               
chr8:58575777-58575597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
416-847
               

               
Cow position:
               
chr9:49370432-49370875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
418-851
               

               
Cow position:
               
chr9:14203181-14203607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
435-847
               

               
Cow position:
               
chr9:60342566-60342989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
9, 195
               

               
Conread position:
               
473-850
               

               
Cow position:
               
chr9:22115431-22115052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
14, 127
               

               
Conread position:
               
477-852
               

               
Cow position:
               
chr9:21076864-21077258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 166
               

               
Conread position:
               
539-851
               

               
Cow position:
               
chr9:44497685-44497363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
36, 125
               

               
Conread position:
               
664-851
               

               
Cow position:
               
chr9:30166888-30167075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
685-848
               

               
Cow position:
               
chr9:14370175-14370010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 41
               

               
Conread position:
               
369-834
               

               
Cow position:
               
chrX:41389707-41390155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
421-785
               

               
Cow position:
               
chrX:24920578-24920221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
421-851
               

               
Cow position:
               
chrX:8931709-8931267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 48
               

               
Conread position:
               
430-851
               

               
Cow position:
               
chrX:25285273-25284845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 150
               

               
Conread position:
               
435-851
               

               
Cow position:
               
chrX:11035069-11034645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 33
               

               
Conread position:
               
435-851
               

               
Cow position:
               
chrX:25379725-25379322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
51, 93
               

               
Conread position:
               
443-851
               

               
Cow position:
               
chrX:23917346-23917742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 140
               

               
Conread position:
               
464-847
               

               
Cow position:
               
chrX:42006446-42006044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 218
               

               
Conread position:
               
518-848
               

               
Cow position:
               
chrX:22861656-22861320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
521-851
               

               
Cow position:
               
chrX:35846740-35846409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
109, 70
               

               
Conread position:
               
534-851
               

               
Cow position:
               
chrX:23078138-23078456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
664-849
               

               
Cow position:
               
chrX:33702409-33702601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
8, 75
               

               
Conread position:
               
664-851
               

               
Cow position:
               
chrX:27518391-27518582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
665-796
               

               
Cow position:
               
chrX:5596916-5597046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
666-851
               

               
Cow position:
               
chrX:799816-799626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
99, 16
               

               
Conread position:
               
667-849
               

               
Cow position:
               
chrX:23367674-23367489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
94, 76
               

               
Conread position:
               
690-851
               

               
Cow position:
               
chrX:34388725-34388890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
695-840
               

               
Cow position:
               
chrX:11328364-11328216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 31