Cow genome map

Conread name: Ss1.1-Pig4-TMW8029F03.3

Conread position: 1-136
Cow position: chr10:6258602-6258732 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 1-140
Cow position: chr10:46193032-46192896 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 1-147
Cow position: chr10:22583164-22583309 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 1-154
Cow position: chr10:29100835-29100990 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 72, 0

Conread position: 1-154
Cow position: chr10:39877537-39877686 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 17, 23

Conread position: 2-123
Cow position: chr10:36468288-36468403 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 2-136
Cow position: chr10:57503364-57503231 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 130, 0

Conread position: 2-154
Cow position: chr10:42642483-42642331 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr10:10584029-10583911 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-122
Cow position: chr10:14863850-14863730 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 3-135
Cow position: chr10:8325224-8325355 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 113

Conread position: 3-137
Cow position: chr10:4997436-4997570 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr10:31045647-31045783 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 113, 63

Conread position: 3-141
Cow position: chr10:11822769-11822631 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 114
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 3-146
Cow position: chr10:18039514-18039373 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 136, 14

Conread position: 3-149
Cow position: chr10:38176848-38176702 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 27

Conread position: 3-152
Cow position: chr10:7896593-7896741 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-152
Cow position: chr10:8340847-8340700 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 3-152
Cow position: chr10:41878812-41878664 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-153
Cow position: chr10:19494401-19494549 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 64

Conread position: 3-154
Cow position: chr10:1379384-1379234 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr10:6556420-6556271 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 3-154
Cow position: chr10:8291928-8291781 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 3-154
Cow position: chr10:10172623-10172473 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr10:14333958-14334108 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr10:14805731-14805584 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 3-154
Cow position: chr10:16927558-16927407 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-154
Cow position: chr10:19841567-19841417 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr10:21738867-21739018 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 140

Conread position: 3-154
Cow position: chr10:22103118-22102971 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr10:22249928-22250078 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr10:22343352-22343202 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr10:23409362-23409512 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr10:25651541-25651691 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr10:28032039-28032190 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 130

Conread position: 3-154
Cow position: chr10:28255520-28255670 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr10:29732626-29732477 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr10:29844770-29844921 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-154
Cow position: chr10:30683603-30683753 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr10:31525616-31525466 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 130, 0

Conread position: 3-154
Cow position: chr10:32702644-32702494 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr10:33871178-33871023 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 57, 134

Conread position: 3-154
Cow position: chr10:34665853-34666002 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 3-154
Cow position: chr10:38343478-38343630 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr10:38842049-38841899 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr10:39039428-39039578 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr10:39209637-39209490 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 3-154
Cow position: chr10:39440039-39439890 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 3-154
Cow position: chr10:39814512-39814661 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr10:41150847-41150997 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 140, 0

Conread position: 3-154
Cow position: chr10:41159301-41159151 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr10:41568989-41568839 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr10:48169315-48169165 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr10:48375565-48375714 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 3-154
Cow position: chr10:55095152-55095002 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 3-157
Cow position: chr10:19705739-19705891 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 118

Conread position: 3-162
Cow position: chr10:54127438-54127281 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 151, 27

Conread position: 4-154
Cow position: chr10:19142729-19142879 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 112, 129

Conread position: 4-154
Cow position: chr10:22644886-22644735 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 4-154
Cow position: chr10:29630907-29631057 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 130

Conread position: 4-154
Cow position: chr10:39778245-39778393 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 49, 44

Conread position: 4-154
Cow position: chr10:53320363-53320512 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 31, 130

Conread position: 4-156
Cow position: chr10:25339983-25339832 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 5-146
Cow position: chr10:22574945-22575088 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 125, 0

Conread position: 7-154
Cow position: chr10:32828758-32828610 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 8, 128

Conread position: 9-216
Cow position: chr10:24295403-24295619 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 115, 74

Conread position: 25-154
Cow position: chr10:57555469-57555597 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 1-123
Cow position: chr11:13064446-13064568 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 116, 25

Conread position: 1-136
Cow position: chr11:30189254-30189121 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 1-154
Cow position: chr11:3227273-3227119 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 134

Conread position: 1-154
Cow position: chr11:78672308-78672457 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 3-122
Cow position: chr11:19100964-19101081 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 3-123
Cow position: chr11:84965701-84965581 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-137
Cow position: chr11:18069400-18069533 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 92, 87

Conread position: 3-137
Cow position: chr11:21446158-21446024 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-138
Cow position: chr11:11590494-11590359 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr11:4033882-4034019 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr11:9733155-9733292 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr11:30208665-30208528 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr11:63977378-63977245 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 3-142
Cow position: chr11:73468368-73468503 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 3-150
Cow position: chr11:3262011-3261869 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 3-152
Cow position: chr11:10883815-10883667 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-152
Cow position: chr11:49038854-49039001 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 3-152
Cow position: chr11:85392306-85392454 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 137, 0

Conread position: 3-153
Cow position: chr11:8265043-8264894 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 3-153
Cow position: chr11:26123395-26123542 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 129, 27

Conread position: 3-154
Cow position: chr11:2833821-2833666 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 135

Conread position: 3-154
Cow position: chr11:3086498-3086645 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 3-154
Cow position: chr11:3494517-3494367 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr11:4026084-4026234 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr11:12318499-12318649 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr11:12356874-12357024 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr11:15986770-15986620 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr11:17547684-17547535 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr11:19062549-19062699 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr11:20732706-20732857 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-154
Cow position: chr11:21898157-21898306 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 3-154
Cow position: chr11:23248942-23249092 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr11:26549053-26548906 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 3-154
Cow position: chr11:28228241-28228390 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 3-154
Cow position: chr11:29667067-29667221 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr11:30253751-30253601 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr11:32079260-32079410 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr11:32453359-32453209 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr11:35253776-35253923 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 3-154
Cow position: chr11:40405526-40405675 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 3-154
Cow position: chr11:41100507-41100357 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 130, 0

Conread position: 3-154
Cow position: chr11:44042235-44042085 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr11:44094094-44094244 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr11:44155473-44155623 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr11:44517338-44517488 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr11:44581815-44581965 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr11:47728164-47728314 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr11:47738020-47738170 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr11:50836140-50836290 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr11:53285649-53285795 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 3-154
Cow position: chr11:53430505-53430658 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 103, 0

Conread position: 3-154
Cow position: chr11:61399577-61399727 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr11:63647589-63647436 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 136, 0

Conread position: 3-154
Cow position: chr11:63653807-63653956 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 113, 54

Conread position: 3-154
Cow position: chr11:67155204-67155055 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 3-154
Cow position: chr11:67452020-67451870 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr11:67845044-67845194 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr11:72309512-72309662 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 128, 0

Conread position: 3-154
Cow position: chr11:86876356-86876506 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-179
Cow position: chr11:27657964-27657790 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 4-153
Cow position: chr11:47758755-47758899 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 4-154
Cow position: chr11:23881549-23881399 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 129

Conread position: 5-154
Cow position: chr11:24394837-24394690 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 9-154
Cow position: chr11:44253592-44253451 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 9-155
Cow position: chr11:60032717-60032862 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 14-154
Cow position: chr11:58135905-58135766 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 17-154
Cow position: chr11:38833934-38834070 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 21-138
Cow position: chr11:13048258-13048375 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr12:21210479-21210342 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 130

Conread position: 3-154
Cow position: chr12:3209782-3209634 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 3-154
Cow position: chr12:6404824-6404974 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr12:11100049-11099899 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr12:14660538-14660685 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 3-154
Cow position: chr12:20461418-20461565 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 3-154
Cow position: chr12:21429823-21429673 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr12:22203897-22204047 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 122

Conread position: 3-154
Cow position: chr12:22519166-22519315 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 3-154
Cow position: chr12:24994148-24994298 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr12:25261705-25261856 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-154
Cow position: chr12:25267597-25267747 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr12:27931093-27931244 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 130

Conread position: 3-154
Cow position: chr12:32655365-32655215 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr12:34175158-34175008 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 3-154
Cow position: chr12:42606436-42606586 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr12:42857720-42857869 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 3-155
Cow position: chr12:21943966-21943813 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 3-156
Cow position: chr12:8676275-8676427 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 4-154
Cow position: chr12:21427779-21427928 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 138, 0

Conread position: 4-154
Cow position: chr12:27854151-27854300 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 128, 0

Conread position: 5-116
Cow position: chr12:756985-756874 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-140
Cow position: chr12:33121222-33121095 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 14-154
Cow position: chr12:25098672-25098810 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 2-154
Cow position: chr13:11797111-11797262 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 61

Conread position: 2-154
Cow position: chr13:34050297-34050151 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 3-138
Cow position: chr13:31507285-31507419 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 129, 0

Conread position: 3-152
Cow position: chr13:4485456-4485308 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 3-152
Cow position: chr13:34031188-34031044 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 3-152
Cow position: chr13:37834730-37834879 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 140

Conread position: 3-152
Cow position: chr13:49494584-49494731 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 3-154
Cow position: chr13:679342-679193 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 3-154
Cow position: chr13:3760034-3760184 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr13:4942980-4942830 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr13:5500404-5500554 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr13:6358719-6358569 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr13:6666544-6666694 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr13:9046343-9046193 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr13:9299041-9298891 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr13:11388800-11388652 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 3-154
Cow position: chr13:13326518-13326370 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 129, 64

Conread position: 3-154
Cow position: chr13:13901459-13901311 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr13:14401513-14401663 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr13:15922863-15923013 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr13:30304792-30304642 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr13:31729311-31729458 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr13:32923538-32923689 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 129

Conread position: 3-154
Cow position: chr13:32983749-32983899 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr13:33334726-33334875 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 123, 0

Conread position: 3-154
Cow position: chr13:33524361-33524511 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr13:34040737-34040889 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 32, 139

Conread position: 3-154
Cow position: chr13:34343501-34343351 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr13:34869566-34869417 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 3-154
Cow position: chr13:35758873-35758726 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 3-154
Cow position: chr13:43981492-43981642 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 136, 69

Conread position: 3-154
Cow position: chr13:48359220-48359071 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 3-154
Cow position: chr13:50192803-50192953 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr13:60648212-60648360 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 3-157
Cow position: chr13:32735597-32735750 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-165
Cow position: chr13:24236040-24235880 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 4-154
Cow position: chr13:14186592-14186445 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 65

Conread position: 4-154
Cow position: chr13:30239941-30239792 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 128, 0

Conread position: 4-154
Cow position: chr13:31610723-31610872 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 128, 0

Conread position: 4-154
Cow position: chr13:42090099-42090248 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 0

Conread position: 5-154
Cow position: chr13:54239848-54239995 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 9-154
Cow position: chr13:20573830-20573976 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 125

Conread position: 9-156
Cow position: chr13:26845807-26845662 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 17-154
Cow position: chr13:47575673-47575537 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 25-154
Cow position: chr13:21697837-21697709 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 1-140
Cow position: chr14:45677619-45677750 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 1-154
Cow position: chr14:42122110-42122257 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 3-129
Cow position: chr14:20911382-20911255 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 3-137
Cow position: chr14:47939496-47939627 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 3-140
Cow position: chr14:16807853-16807989 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 3-140
Cow position: chr14:16999581-16999718 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-151
Cow position: chr14:5075406-5075265 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 3-154
Cow position: chr14:191520-191365 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr14:752035-751885 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr14:1659925-1659775 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr14:5530528-5530378 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr14:7473819-7473672 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 3-154
Cow position: chr14:11152683-11152832 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 3-154
Cow position: chr14:11475820-11475972 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 3-154
Cow position: chr14:12741576-12741726 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr14:16342431-16342581 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr14:16918256-16918401 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 3-154
Cow position: chr14:19326792-19326942 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr14:20783937-20783788 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 3-154
Cow position: chr14:22029982-22030129 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 3-154
Cow position: chr14:23255891-23256041 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr14:27978826-27978676 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr14:30594884-30595034 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 148, 140

Conread position: 3-154
Cow position: chr14:32448424-32448274 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 117, 86

Conread position: 3-154
Cow position: chr14:33392454-33392605 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 143, 139

Conread position: 3-154
Cow position: chr14:33490307-33490155 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 138, 106

Conread position: 3-154
Cow position: chr14:37225626-37225474 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 131, 0

Conread position: 3-154
Cow position: chr14:43559706-43559558 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 3-154
Cow position: chr14:45027532-45027682 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr14:45670561-45670715 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 3-154
Cow position: chr14:45710268-45710419 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 130

Conread position: 3-154
Cow position: chr14:48252857-48253008 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-157
Cow position: chr14:5514394-5514245 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 3-159
Cow position: chr14:47656852-47656694 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 20

Conread position: 3-196
Cow position: chr14:39298756-39298567 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 129, 13

Conread position: 4-124
Cow position: chr14:17759430-17759549 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 4-139
Cow position: chr14:45086686-45086554 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 4-140
Cow position: chr14:46390162-46390298 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-154
Cow position: chr14:9521116-9521264 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 4-154
Cow position: chr14:17489871-17490020 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 138, 0

Conread position: 4-154
Cow position: chr14:45163690-45163543 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 125, 0

Conread position: 4-154
Cow position: chr14:48826741-48826595 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 4-154
Cow position: chr14:50112828-50112679 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 128, 0

Conread position: 5-153
Cow position: chr14:22361469-22361329 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 5-154
Cow position: chr14:2287733-2287585 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 137, 0

Conread position: 5-154
Cow position: chr14:45082583-45082435 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 9-157
Cow position: chr14:33678526-33678379 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 125, 0

Conread position: 1-141
Cow position: chr15:29342530-29342668 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 52, 66

Conread position: 1-154
Cow position: chr15:24041737-24041590 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 2-141
Cow position: chr15:26157301-26157162 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 21

Conread position: 2-149
Cow position: chr15:20355132-20355275 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 3-112
Cow position: chr15:8810849-8810958 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr15:50148800-50148682 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-136
Cow position: chr15:9737457-9737592 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 3-141
Cow position: chr15:7262084-7261946 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-150
Cow position: chr15:7930036-7929891 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 3-152
Cow position: chr15:24795285-24795137 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 3-152
Cow position: chr15:31846915-31846765 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 57

Conread position: 3-152
Cow position: chr15:35646215-35646364 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 112, 131

Conread position: 3-153
Cow position: chr15:9431403-9431255 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 3-153
Cow position: chr15:53339691-53339542 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 14

Conread position: 3-154
Cow position: chr15:107469-107319 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr15:1768295-1768146 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 3-154
Cow position: chr15:1783799-1783649 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr15:2078117-2077967 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr15:2646185-2646335 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr15:2900792-2900942 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr15:3259853-3260004 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 130

Conread position: 3-154
Cow position: chr15:3890372-3890223 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 117, 0

Conread position: 3-154
Cow position: chr15:4080767-4080917 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr15:4687198-4687047 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-154
Cow position: chr15:4726671-4726520 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 130

Conread position: 3-154
Cow position: chr15:4927849-4927695 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 3-154
Cow position: chr15:5010164-5010313 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr15:5981826-5981675 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 130

Conread position: 3-154
Cow position: chr15:6154460-6154608 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr15:6479848-6479697 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-154
Cow position: chr15:6552312-6552463 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 36, 44

Conread position: 3-154
Cow position: chr15:6562055-6561905 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr15:7235791-7235643 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 65

Conread position: 3-154
Cow position: chr15:7564466-7564315 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-154
Cow position: chr15:7838737-7838587 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr15:8100919-8100769 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr15:13389856-13390006 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr15:14580892-14581045 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 123, 27

Conread position: 3-154
Cow position: chr15:15345639-15345790 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 138

Conread position: 3-154
Cow position: chr15:16190303-16190453 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr15:18022542-18022695 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 3-154
Cow position: chr15:18578181-18578031 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 131, 27

Conread position: 3-154
Cow position: chr15:19736587-19736739 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 97, 131

Conread position: 3-154
Cow position: chr15:20412064-20411914 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 140, 0

Conread position: 3-154
Cow position: chr15:25070532-25070681 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 3-154
Cow position: chr15:25205538-25205688 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr15:28488686-28488835 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 113, 0

Conread position: 3-154
Cow position: chr15:31859488-31859638 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 130, 0

Conread position: 3-154
Cow position: chr15:32067141-32067291 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr15:33122848-33122696 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 141

Conread position: 3-154
Cow position: chr15:35898306-35898458 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 141

Conread position: 3-154
Cow position: chr15:41659636-41659486 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr15:53410374-53410224 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 73

Conread position: 3-156
Cow position: chr15:12419238-12419391 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-157
Cow position: chr15:18331369-18331518 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 3-168
Cow position: chr15:44072147-44071982 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 70

Conread position: 4-140
Cow position: chr15:4814057-4813919 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 4-154
Cow position: chr15:42919-42773 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 74, 26

Conread position: 4-154
Cow position: chr15:1765782-1765634 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 4-154
Cow position: chr15:4387225-4387075 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 7, 129

Conread position: 4-159
Cow position: chr15:11627138-11626981 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 5-154
Cow position: chr15:6590650-6590799 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 136, 25

Conread position: 7-153
Cow position: chr15:32719215-32719361 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 120

Conread position: 9-148
Cow position: chr15:4823894-4823755 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-154
Cow position: chr15:17036197-17036340 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 111, 30

Conread position: 9-154
Cow position: chr15:35751843-35751987 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 13-154
Cow position: chr15:17294507-17294368 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 17-140
Cow position: chr15:21451149-21451026 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 52

Conread position: 1-154
Cow position: chr16:41753485-41753635 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 127
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 15, 23

Conread position: 2-190
Cow position: chr16:20200253-20200065 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 21

Conread position: 3-122
Cow position: chr16:23250858-23250974 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 3-124
Cow position: chr16:28169196-28169317 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-135
Cow position: chr16:5891122-5890990 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-136
Cow position: chr16:54324203-54324335 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-140
Cow position: chr16:1433310-1433175 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 3-140
Cow position: chr16:5527261-5527397 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 3-140
Cow position: chr16:16992170-16992034 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-140
Cow position: chr16:23984428-23984291 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr16:41572525-41572388 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 20

Conread position: 3-140
Cow position: chr16:51039469-51039333 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 3-150
Cow position: chr16:838438-838291 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-152
Cow position: chr16:43846092-43846239 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 3-153
Cow position: chr16:7675332-7675481 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-153
Cow position: chr16:27594633-27594484 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr16:33657-33501 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 3-154
Cow position: chr16:1566338-1566486 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 3-154
Cow position: chr16:2409808-2409958 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr16:3088078-3088228 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr16:3331055-3330905 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr16:3828213-3828366 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 133

Conread position: 3-154
Cow position: chr16:5118893-5119043 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr16:5662965-5662815 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr16:7465731-7465581 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 138

Conread position: 3-154
Cow position: chr16:8814982-8815132 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr16:10374477-10374626 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 3-154
Cow position: chr16:10439382-10439234 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 3-154
Cow position: chr16:14664690-14664837 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 3-154
Cow position: chr16:15186199-15186055 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 3-154
Cow position: chr16:15568382-15568233 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 3-154
Cow position: chr16:16240168-16240318 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr16:19778526-19778676 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr16:20193046-20193196 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr16:22800547-22800698 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 128, 140

Conread position: 3-154
Cow position: chr16:23534773-23534925 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 32, 131

Conread position: 3-154
Cow position: chr16:25086737-25086587 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr16:25258928-25258778 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr16:25442755-25442605 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr16:25456355-25456505 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr16:26664852-26664701 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 130

Conread position: 3-154
Cow position: chr16:27732255-27732406 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 130

Conread position: 3-154
Cow position: chr16:28469936-28470086 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr16:34531413-34531263 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 144, 0

Conread position: 3-154
Cow position: chr16:40295041-40295191 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr16:42747094-42747244 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 3-154
Cow position: chr16:43896138-43896286 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 3-154
Cow position: chr16:44899540-44899689 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 51

Conread position: 3-154
Cow position: chr16:49220792-49220941 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 128, 0

Conread position: 3-154
Cow position: chr16:51085282-51085133 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 3-157
Cow position: chr16:29048148-29047995 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 4-121
Cow position: chr16:1959501-1959618 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-152
Cow position: chr16:16537925-16537779 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 5-154
Cow position: chr16:4474478-4474630 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 5-154
Cow position: chr16:25343094-25342947 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 7-185
Cow position: chr16:20641302-20641128 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 9-152
Cow position: chr16:4847790-4847930 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 9-154
Cow position: chr16:2726095-2726239 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 9-154
Cow position: chr16:12536832-12536976 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 131, 0

Conread position: 9-158
Cow position: chr16:5872012-5871865 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 2-156
Cow position: chr17:18589915-18589761 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr17:2170121-2169980 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 3-140
Cow position: chr17:15437484-15437347 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-149
Cow position: chr17:9751406-9751261 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 3-152
Cow position: chr17:16120906-16121054 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 130, 0

Conread position: 3-152
Cow position: chr17:20080196-20080344 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr17:40140-39990 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr17:136328-136178 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr17:183271-183121 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr17:2175620-2175470 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr17:2246386-2246536 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr17:2263839-2263689 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr17:2554575-2554725 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr17:2581529-2581379 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr17:3640205-3640355 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr17:6121486-6121335 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 126, 140

Conread position: 3-154
Cow position: chr17:6261559-6261409 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr17:8210341-8210191 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr17:11086027-11086177 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr17:11784567-11784417 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr17:13967626-13967476 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr17:14215348-14215498 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr17:14936274-14936421 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 90, 0

Conread position: 3-154
Cow position: chr17:15141657-15141807 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr17:15852393-15852243 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr17:17256990-17257140 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr17:19267145-19267295 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr17:19980439-19980586 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 3-154
Cow position: chr17:20414760-20414910 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr17:20490004-20489854 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr17:22561588-22561447 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 3-154
Cow position: chr17:23322748-23322898 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr17:24028305-24028452 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 3-154
Cow position: chr17:24783862-24783712 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 140, 0

Conread position: 3-154
Cow position: chr17:27793083-27793233 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr17:28026807-28026954 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 3-154
Cow position: chr17:34157820-34157672 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 3-154
Cow position: chr17:34159426-34159276 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 43

Conread position: 3-154
Cow position: chr17:34574443-34574293 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr17:39049917-39049765 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 141

Conread position: 3-154
Cow position: chr17:40806507-40806357 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr17:45271419-45271569 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 4-150
Cow position: chr17:41337090-41337236 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 139

Conread position: 4-154
Cow position: chr17:33283993-33284142 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 108
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 128, 0

Conread position: 5-154
Cow position: chr17:43990200-43990052 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 127, 138

Conread position: 6-154
Cow position: chr17:20086079-20086226 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 9-179
Cow position: chr17:20404110-20403943 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 161, 82

Conread position: 41-154
Cow position: chr17:4345917-4346029 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 1-144
Cow position: chr18:12238351-12238208 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 70

Conread position: 2-140
Cow position: chr18:5078192-5078325 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 2-154
Cow position: chr18:1046185-1046034 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 131, 0

Conread position: 3-122
Cow position: chr18:9722532-9722413 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-123
Cow position: chr18:27836177-27836297 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-131
Cow position: chr18:35372852-35372976 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 3-138
Cow position: chr18:24714279-24714415 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 3-139
Cow position: chr18:23703179-23703314 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 3-140
Cow position: chr18:42493178-42493316 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 3-141
Cow position: chr18:35290559-35290422 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 3-147
Cow position: chr18:16464953-16465097 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-152
Cow position: chr18:37490730-37490584 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 128, 0

Conread position: 3-152
Cow position: chr18:54107013-54106866 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 111, 0

Conread position: 3-153
Cow position: chr18:25922299-25922150 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr18:5534914-5534764 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr18:11272950-11273099 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr18:14132298-14132148 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr18:14417877-14417725 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 131, 0

Conread position: 3-154
Cow position: chr18:16174713-16174862 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 3-154
Cow position: chr18:23660593-23660743 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr18:23799552-23799403 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 3-154
Cow position: chr18:24618041-24617891 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr18:27989094-27988944 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr18:29864703-29864852 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 3-154
Cow position: chr18:33270808-33270656 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 3-154
Cow position: chr18:36510525-36510375 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr18:37507871-37507721 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr18:37583999-37584149 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr18:41838882-41839031 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 3-154
Cow position: chr18:46867009-46867159 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 141, 69

Conread position: 3-154
Cow position: chr18:47743399-47743250 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 3-154
Cow position: chr18:51343591-51343441 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr18:51482762-51482612 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr18:52654720-52654574 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 3-154
Cow position: chr18:54004270-54004422 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 99, 41

Conread position: 3-154
Cow position: chr18:54169615-54169765 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 130, 0

Conread position: 3-155
Cow position: chr18:19354275-19354124 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-177
Cow position: chr18:37701584-37701754 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 128, 0

Conread position: 4-152
Cow position: chr18:48469273-48469420 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 117

Conread position: 4-159
Cow position: chr18:54025716-54025561 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 128

Conread position: 7-154
Cow position: chr18:4947852-4947705 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 136

Conread position: 9-152
Cow position: chr18:999363-999222 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 105, 0

Conread position: 9-154
Cow position: chr18:40482898-40482755 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 117, 0

Conread position: 11-140
Cow position: chr18:18495130-18495256 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 13-171
Cow position: chr18:18853115-18852958 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 27, 47

Conread position: 1-156
Cow position: chr19:40470787-40470938 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 1-160
Cow position: chr19:2587136-2586974 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 2-136
Cow position: chr19:48859846-48859974 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 2-140
Cow position: chr19:1660588-1660450 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-154
Cow position: chr19:39183630-39183782 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-130
Cow position: chr19:891726-891853 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr19:40261-40124 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr19:7343980-7343843 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-153
Cow position: chr19:40850555-40850705 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 78, 114

Conread position: 3-154
Cow position: chr19:166217-166367 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr19:174172-174022 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr19:206425-206271 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr19:774517-774367 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 3-154
Cow position: chr19:2272207-2272353 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 3-154
Cow position: chr19:4387513-4387364 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr19:5899597-5899746 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr19:16318716-16318866 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr19:20106639-20106489 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr19:28579753-28579904 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 130

Conread position: 3-154
Cow position: chr19:32468816-32468666 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr19:33875324-33875174 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr19:33943480-33943330 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr19:39392422-39392272 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 128, 0

Conread position: 3-154
Cow position: chr19:52149769-52149919 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-156
Cow position: chr19:5730753-5730605 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 3-179
Cow position: chr19:15445951-15446130 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 119, 130

Conread position: 3-368
Cow position: chr19:21338934-21339299 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 4-152
Cow position: chr19:19178115-19178265 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 27

Conread position: 4-154
Cow position: chr19:39666639-39666785 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 128, 62

Conread position: 4-154
Cow position: chr19:39689677-39689528 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 15-154
Cow position: chr19:43146560-43146422 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 127, 0

Conread position: 16-154
Cow position: chr19:12775004-12774867 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 2-172
Cow position: chr20:14875595-14875421 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 3-140
Cow position: chr20:37582039-37581902 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 54

Conread position: 3-143
Cow position: chr20:28563702-28563842 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-150
Cow position: chr20:35126530-35126384 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 137, 0

Conread position: 3-152
Cow position: chr20:8365848-8365995 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 3-153
Cow position: chr20:824641-824491 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 143, 139

Conread position: 3-154
Cow position: chr20:9547520-9547370 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 130, 0

Conread position: 3-154
Cow position: chr20:13764770-13764619 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 97, 130

Conread position: 3-154
Cow position: chr20:15096019-15096171 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 131, 0

Conread position: 3-154
Cow position: chr20:15293855-15293704 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 117, 130

Conread position: 3-154
Cow position: chr20:17659869-17660021 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 3-154
Cow position: chr20:19439790-19439640 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr20:20441077-20441227 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr20:21916511-21916361 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr20:23467794-23467944 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr20:23800759-23800607 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 3-154
Cow position: chr20:25848959-25849106 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 3-154
Cow position: chr20:25899562-25899412 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr20:26053817-26053966 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 3-154
Cow position: chr20:28162699-28162549 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr20:29950398-29950249 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr20:30430144-30429996 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 8, 64

Conread position: 3-154
Cow position: chr20:30687455-30687309 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 3-154
Cow position: chr20:41363771-41363919 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 4-148
Cow position: chr20:32350119-32349978 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 62

Conread position: 4-154
Cow position: chr20:15067320-15067176 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 5-150
Cow position: chr20:5792154-5792010 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 128, 0

Conread position: 8-154
Cow position: chr20:10101153-10101297 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 11-154
Cow position: chr20:12692925-12692783 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 132, 0

Conread position: 15-154
Cow position: chr20:39881131-39880994 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 18-154
Cow position: chr20:5536803-5536668 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 18-154
Cow position: chr20:18323092-18323227 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 1-134
Cow position: chr21:29003532-29003665 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 112
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-134
Cow position: chr21:36978915-36979047 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 113
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 72, 0

Conread position: 1-140
Cow position: chr21:23652150-23652015 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 2-137
Cow position: chr21:38024110-38023981 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 2-154
Cow position: chr21:4565447-4565297 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 137, 63

Conread position: 3-140
Cow position: chr21:27567761-27567624 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-152
Cow position: chr21:4096664-4096516 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-152
Cow position: chr21:4182541-4182393 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 3-153
Cow position: chr21:26401767-26401921 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 134

Conread position: 3-154
Cow position: chr21:147906-147757 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 3-154
Cow position: chr21:468886-468733 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 133

Conread position: 3-154
Cow position: chr21:1194422-1194272 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr21:2512835-2512685 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr21:3780761-3780609 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 3-154
Cow position: chr21:5019128-5018976 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 126, 0

Conread position: 3-154
Cow position: chr21:6414038-6414188 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr21:19612746-19612596 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr21:26635171-26635321 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr21:27068978-27069128 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr21:30563650-30563500 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr21:30597484-30597635 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 117, 130

Conread position: 3-154
Cow position: chr21:31514331-31514480 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 3-154
Cow position: chr21:37373212-37373062 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr21:39427051-39426900 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 124

Conread position: 3-154
Cow position: chr21:40269685-40269836 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 130

Conread position: 3-154
Cow position: chr21:41885561-41885711 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 130, 0

Conread position: 3-154
Cow position: chr21:42915790-42915643 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 3-154
Cow position: chr21:44763968-44764119 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 130

Conread position: 3-154
Cow position: chr21:45783419-45783270 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 3-154
Cow position: chr21:47647318-47647168 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 4-147
Cow position: chr21:1286217-1286359 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 4-152
Cow position: chr21:9893953-9893806 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 85

Conread position: 4-154
Cow position: chr21:34655815-34655664 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 135, 0

Conread position: 4-159
Cow position: chr21:18816273-18816424 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 129

Conread position: 5-135
Cow position: chr21:49092432-49092564 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 35

Conread position: 5-157
Cow position: chr21:7591640-7591491 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 7-153
Cow position: chr21:28257403-28257258 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 135, 0

Conread position: 8-154
Cow position: chr21:2418185-2418040 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 124, 0

Conread position: 9-144
Cow position: chr21:31008-30874 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 14

Conread position: 9-152
Cow position: chr21:46290087-46289946 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 9-154
Cow position: chr21:31250973-31250828 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 130

Conread position: 9-155
Cow position: chr21:29910592-29910734 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 17-140
Cow position: chr21:47440-47319 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-140
Cow position: chr22:3272254-3272390 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 2-140
Cow position: chr22:289882-290016 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 2-154
Cow position: chr22:44492864-44492713 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 3-125
Cow position: chr22:18814231-18814354 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 3-134
Cow position: chr22:13774329-13774198 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-134
Cow position: chr22:36586004-36586132 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 3-135
Cow position: chr22:6501101-6501233 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr22:29853668-29853531 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr22:36560249-36560381 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 3-151
Cow position: chr22:44367667-44367814 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-153
Cow position: chr22:297262-297115 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 3-153
Cow position: chr22:36562623-36562767 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 3-153
Cow position: chr22:44348059-44348202 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 3-154
Cow position: chr22:538920-538773 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 3-154
Cow position: chr22:1519218-1519369 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-154
Cow position: chr22:1880619-1880469 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr22:2562944-2563094 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr22:3276542-3276692 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr22:5314103-5313953 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr22:11803240-11803388 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 3-154
Cow position: chr22:15310143-15310293 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr22:15853234-15853087 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr22:18029084-18028934 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr22:18604986-18605136 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr22:20239024-20239174 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr22:21591237-21591087 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr22:29499355-29499205 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr22:30676899-30677049 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr22:32282867-32283017 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr22:34170149-34170000 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 3-154
Cow position: chr22:37291862-37292013 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 130

Conread position: 3-154
Cow position: chr22:39467701-39467853 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 131, 0

Conread position: 3-154
Cow position: chr22:44459475-44459317 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 3-154
Cow position: chr22:44935776-44935627 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr22:45015160-45015009 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 104, 125

Conread position: 3-157
Cow position: chr22:558896-559047 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 3-157
Cow position: chr22:28783928-28783775 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-157
Cow position: chr22:31333236-31333387 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 3-228
Cow position: chr22:36574196-36574413 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 189, 42

Conread position: 4-140
Cow position: chr22:35669857-35669993 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 4-154
Cow position: chr22:1323961-1323815 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 4-154
Cow position: chr22:21336768-21336619 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 138, 0

Conread position: 4-154
Cow position: chr22:36859735-36859884 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 128, 0

Conread position: 4-154
Cow position: chr22:42992985-42992834 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 138

Conread position: 4-154
Cow position: chr22:44398243-44398094 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 4-167
Cow position: chr22:5013881-5013718 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-154
Cow position: chr22:3803993-3803845 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 127, 0

Conread position: 9-152
Cow position: chr22:48274536-48274676 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 11-148
Cow position: chr22:10782901-10782765 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 13-140
Cow position: chr22:40382844-40382716 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-153
Cow position: chr23:26838640-26838491 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 2-154
Cow position: chr23:2793459-2793611 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 116, 139

Conread position: 2-154
Cow position: chr23:6221099-6220943 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 3-122
Cow position: chr23:22168479-22168361 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 3-123
Cow position: chr23:10874792-10874912 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-129
Cow position: chr23:31164612-31164486 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr23:15875758-15875893 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 3-145
Cow position: chr23:28219245-28219104 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr23:608523-608373 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr23:1400398-1400548 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 130, 0

Conread position: 3-154
Cow position: chr23:2759709-2759559 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr23:3708213-3708064 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 3-154
Cow position: chr23:3879275-3879425 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr23:4638787-4638937 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 128, 0

Conread position: 3-154
Cow position: chr23:4890494-4890343 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 130

Conread position: 3-154
Cow position: chr23:7314721-7314571 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr23:7357048-7356897 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 149, 139

Conread position: 3-154
Cow position: chr23:11714055-11714205 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr23:14961141-14961290 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 3-154
Cow position: chr23:15218077-15218227 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr23:15527391-15527238 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 117, 0

Conread position: 3-154
Cow position: chr23:16497443-16497592 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr23:19491361-19491212 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr23:20154417-20154566 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr23:22145495-22145645 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr23:28304726-28304576 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr23:29479014-29478866 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 3-154
Cow position: chr23:31648224-31648371 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 16

Conread position: 3-154
Cow position: chr23:32350951-32351101 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr23:36029572-36029722 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 118

Conread position: 3-154
Cow position: chr23:41141416-41141566 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 3-157
Cow position: chr23:1957971-1957818 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-157
Cow position: chr23:2439476-2439631 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 141

Conread position: 3-168
Cow position: chr23:4755535-4755373 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 4-154
Cow position: chr23:1339992-1340141 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 4-154
Cow position: chr23:5872761-5872911 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 129

Conread position: 4-154
Cow position: chr23:35274452-35274305 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 4-154
Cow position: chr23:38579481-38579332 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 9-154
Cow position: chr23:15178868-15178724 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 131, 0

Conread position: 17-137
Cow position: chr23:2577425-2577306 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 21-154
Cow position: chr23:23172569-23172437 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 1-141
Cow position: chr24:14870425-14870559 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 2-135
Cow position: chr24:17957630-17957762 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 130, 0

Conread position: 2-154
Cow position: chr24:19184066-19183914 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-123
Cow position: chr24:36299312-36299190 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 3-139
Cow position: chr24:12107665-12107801 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-139
Cow position: chr24:14382729-14382866 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 3-139
Cow position: chr24:41004389-41004250 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 3-140
Cow position: chr24:5991263-5991400 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr24:17322576-17322439 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-154
Cow position: chr24:146709-146861 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr24:209109-209259 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr24:6411378-6411228 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr24:6962850-6963000 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 122, 0

Conread position: 3-154
Cow position: chr24:9090160-9090311 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-154
Cow position: chr24:11151226-11151374 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 64

Conread position: 3-154
Cow position: chr24:12127210-12127360 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr24:13043727-13043877 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr24:13190064-13189914 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 3-154
Cow position: chr24:13234148-13233999 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 3-154
Cow position: chr24:16082600-16082750 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr24:16560409-16560560 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 32, 130

Conread position: 3-154
Cow position: chr24:17410359-17410209 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr24:19468708-19468858 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 130, 0

Conread position: 3-154
Cow position: chr24:19835304-19835157 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 3-154
Cow position: chr24:20286012-20286162 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr24:22972965-22972815 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 3-154
Cow position: chr24:23094126-23094274 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 63

Conread position: 3-154
Cow position: chr24:23096864-23097013 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 3-154
Cow position: chr24:23503959-23504109 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr24:25438502-25438352 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 130, 0

Conread position: 3-154
Cow position: chr24:29189187-29189037 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 102

Conread position: 3-154
Cow position: chr24:33935288-33935138 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr24:36557670-36557820 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 144, 0

Conread position: 3-154
Cow position: chr24:40469074-40468922 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 37, 139

Conread position: 3-154
Cow position: chr24:40550523-40550373 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-155
Cow position: chr24:7063440-7063290 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 3-157
Cow position: chr24:12088100-12087947 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-157
Cow position: chr24:14755899-14755746 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 4-154
Cow position: chr24:9073426-9073574 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 142, 35

Conread position: 4-178
Cow position: chr24:17300010-17300185 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 130

Conread position: 5-154
Cow position: chr24:12333840-12333989 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr25:14538065-14538182 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 3-122
Cow position: chr25:22149419-22149304 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 3-140
Cow position: chr25:13958670-13958532 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 3-154
Cow position: chr25:11042202-11042060 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 3-154
Cow position: chr25:12940810-12940960 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr25:13692805-13692955 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr25:13782910-13782760 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr25:16924540-16924690 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 130, 0

Conread position: 3-154
Cow position: chr25:17587705-17587855 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 58

Conread position: 3-154
Cow position: chr25:18191793-18191939 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 3-154
Cow position: chr25:18887881-18888031 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr25:19338737-19338887 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr25:19922403-19922253 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 3-154
Cow position: chr25:20346120-20346270 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr25:27020735-27020885 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr25:28861471-28861321 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr25:34345142-34345291 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 4-137
Cow position: chr25:17558304-17558437 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-149
Cow position: chr25:29152198-29152342 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 132, 18

Conread position: 4-154
Cow position: chr25:25508564-25508420 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 4-156
Cow position: chr25:27522768-27522915 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 17-171
Cow position: chr25:13771697-13771850 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 125, 0

Conread position: 2-137
Cow position: chr26:17322516-17322384 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 3-140
Cow position: chr26:17326017-17325879 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr26:2200502-2200352 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr26:3028965-3029115 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr26:3226216-3226363 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 3-154
Cow position: chr26:6081536-6081687 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 122, 26

Conread position: 3-154
Cow position: chr26:6424826-6424676 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr26:6847585-6847735 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr26:8871707-8871557 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr26:9113751-9113605 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 3-154
Cow position: chr26:12586680-12586830 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr26:13773019-13773169 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 130, 0

Conread position: 3-154
Cow position: chr26:14895816-14895669 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 3-154
Cow position: chr26:17395042-17395189 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 3-154
Cow position: chr26:21824808-21824960 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 132

Conread position: 3-154
Cow position: chr26:23888266-23888116 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr26:30587498-30587648 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr26:30784619-30784469 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr26:33148001-33148151 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr26:35101632-35101481 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 118, 38

Conread position: 4-160
Cow position: chr26:18034782-18034625 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 87, 26

Conread position: 5-154
Cow position: chr26:6805200-6805344 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 5-157
Cow position: chr26:14506421-14506567 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 8-154
Cow position: chr26:34013526-34013381 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 13-154
Cow position: chr26:9560723-9560863 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 1-133
Cow position: chr27:15373662-15373530 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-140
Cow position: chr27:8590893-8590753 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 105, 0

Conread position: 2-135
Cow position: chr27:6016241-6016109 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 2-140
Cow position: chr27:25085377-25085239 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 13, 21

Conread position: 3-122
Cow position: chr27:10377555-10377436 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-129
Cow position: chr27:11487082-11486956 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr27:1676757-1676895 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-150
Cow position: chr27:28893420-28893278 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 3-152
Cow position: chr27:25058715-25058570 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 3-154
Cow position: chr27:167112-167262 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr27:797751-797901 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr27:1211172-1211022 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr27:3233707-3233856 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 3-154
Cow position: chr27:4981185-4981038 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 3-154
Cow position: chr27:8199624-8199474 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 3-154
Cow position: chr27:9331557-9331400 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 103, 136

Conread position: 3-154
Cow position: chr27:9991400-9991550 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr27:12748853-12748702 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-154
Cow position: chr27:15035293-15035445 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 117, 0

Conread position: 3-154
Cow position: chr27:15635527-15635677 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr27:16032588-16032737 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 3-154
Cow position: chr27:19525362-19525211 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 130

Conread position: 3-154
Cow position: chr27:25802879-25803030 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 58

Conread position: 3-154
Cow position: chr27:26326877-26326727 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr27:26553629-26553775 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 3-154
Cow position: chr27:27664808-27664660 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 123, 65

Conread position: 17-154
Cow position: chr27:13899113-13898977 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 1-141
Cow position: chr28:8785299-8785163 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 2-141
Cow position: chr28:13604819-13604685 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 2-154
Cow position: chr28:3018846-3019000 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 0

Conread position: 3-122
Cow position: chr28:12408363-12408482 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-122
Cow position: chr28:33254163-33254044 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-136
Cow position: chr28:17630959-17630826 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr28:9180735-9180599 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 3-140
Cow position: chr28:10615147-10615284 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 18

Conread position: 3-140
Cow position: chr28:22231432-22231568 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 3-140
Cow position: chr28:31591419-31591282 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-141
Cow position: chr28:7827838-7827700 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-153
Cow position: chr28:307982-308131 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 3-153
Cow position: chr28:15034251-15034401 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 109, 130

Conread position: 3-154
Cow position: chr28:483734-483884 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr28:784517-784367 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 122

Conread position: 3-154
Cow position: chr28:1166034-1166183 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 3-154
Cow position: chr28:1215979-1216127 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 3-154
Cow position: chr28:1459955-1459805 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr28:1506726-1506576 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr28:1813080-1813224 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 3-154
Cow position: chr28:1955215-1955065 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr28:3190392-3190542 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr28:5568011-5567861 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr28:5749844-5749993 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr28:5815065-5814919 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 3-154
Cow position: chr28:5939347-5939198 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr28:6778081-6778231 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr28:7058808-7058958 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr28:8380896-8380747 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 3-154
Cow position: chr28:9288807-9288657 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr28:14703524-14703673 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 3-154
Cow position: chr28:15998963-15998813 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr28:17390263-17390111 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 138, 0

Conread position: 3-154
Cow position: chr28:17665467-17665617 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr28:18518587-18518737 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr28:24590716-24590566 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr28:26424401-26424551 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr28:32790539-32790689 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr28:33638398-33638254 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 129, 38

Conread position: 3-154
Cow position: chr28:34596091-34595942 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 56

Conread position: 3-156
Cow position: chr28:7003860-7003704 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-157
Cow position: chr28:32304389-32304542 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 137, 0

Conread position: 3-236
Cow position: chr28:10471512-10471280 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 195, 129

Conread position: 4-154
Cow position: chr28:2086324-2086175 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 136, 0

Conread position: 4-154
Cow position: chr28:8719102-8719246 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 4-154
Cow position: chr28:24669456-24669307 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 122, 0

Conread position: 5-153
Cow position: chr28:11504383-11504530 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 128, 0

Conread position: 5-154
Cow position: chr28:22259299-22259444 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 5-157
Cow position: chr28:1765833-1765684 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 56, 18

Conread position: 5-158
Cow position: chr28:24559458-24559306 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 138, 0

Conread position: 9-175
Cow position: chr28:34201801-34201964 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 25-154
Cow position: chr28:29821826-29821696 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-154
Cow position: chr29:16014478-16014626 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 2-140
Cow position: chr29:17152076-17151939 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 131, 0

Conread position: 2-140
Cow position: chr29:40612052-40612187 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 2-154
Cow position: chr29:12794303-12794154 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 2-154
Cow position: chr29:13018515-13018364 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 130, 0

Conread position: 3-152
Cow position: chr29:22951351-22951499 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 3-152
Cow position: chr29:29617484-29617629 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 64

Conread position: 3-152
Cow position: chr29:36596255-36596398 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 3-154
Cow position: chr29:46638-46787 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 3-154
Cow position: chr29:409438-409588 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr29:608824-608974 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr29:2101662-2101513 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 117, 0

Conread position: 3-154
Cow position: chr29:2465052-2465202 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr29:2691986-2691836 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr29:2839517-2839669 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 129, 76

Conread position: 3-154
Cow position: chr29:5236848-5236695 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr29:6264175-6264326 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 99, 130

Conread position: 3-154
Cow position: chr29:7429296-7429446 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 128, 0

Conread position: 3-154
Cow position: chr29:7846214-7846064 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr29:9640960-9641111 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 130

Conread position: 3-154
Cow position: chr29:10022508-10022658 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr29:10645587-10645737 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr29:10822097-10822248 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 117, 21

Conread position: 3-154
Cow position: chr29:13583905-13583755 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr29:13622034-13622184 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr29:14209728-14209878 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr29:15624901-15625048 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 3-154
Cow position: chr29:16024387-16024237 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr29:16688656-16688509 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 3-154
Cow position: chr29:19526462-19526612 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr29:19621443-19621598 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr29:19655442-19655292 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr29:19889407-19889260 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 3-154
Cow position: chr29:21431031-21431178 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 3-154
Cow position: chr29:23977947-23977797 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 128, 0

Conread position: 3-154
Cow position: chr29:25930695-25930847 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 129, 27

Conread position: 3-154
Cow position: chr29:26163012-26163159 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 3-154
Cow position: chr29:27179929-27180079 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr29:27261357-27261507 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr29:31095754-31095904 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr29:31183226-31183076 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr29:32541919-32541768 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 130

Conread position: 3-154
Cow position: chr29:32557927-32558077 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr29:34797987-34798137 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 43

Conread position: 3-154
Cow position: chr29:35298734-35298584 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr29:38206840-38206990 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr29:39077888-39078037 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 3-154
Cow position: chr29:40501186-40501333 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 3-154
Cow position: chr29:45206354-45206204 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-156
Cow position: chr29:13851054-13851206 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 14

Conread position: 4-137
Cow position: chr29:4517423-4517290 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 4-154
Cow position: chr29:9082063-9082213 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 129

Conread position: 4-154
Cow position: chr29:32288069-32287920 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 65

Conread position: 5-154
Cow position: chr29:38228799-38228651 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 127, 0

Conread position: 5-157
Cow position: chr29:8625373-8625523 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 127, 0

Conread position: 8-154
Cow position: chr29:27812902-27812757 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 125, 0

Conread position: 17-150
Cow position: chr29:647617-647484 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-154
Cow position: chr29:43325324-43325190 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 113

Conread position: 1-140
Cow position: chr6:35722910-35722769 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 1-154
Cow position: chr6:15925781-15925928 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 1-154
Cow position: chr6:69144351-69144200 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 128
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 134, 65

Conread position: 3-122
Cow position: chr6:8759509-8759628 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-122
Cow position: chr6:55541476-55541595 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-123
Cow position: chr6:43431575-43431695 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr6:3151019-3150882 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr6:14081333-14081196 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 104

Conread position: 3-152
Cow position: chr6:21974451-21974305 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 3-153
Cow position: chr6:13848850-13848701 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr6:183760-183909 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 3-154
Cow position: chr6:329682-329832 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr6:477323-477172 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-154
Cow position: chr6:703995-703845 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr6:915417-915264 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 3-154
Cow position: chr6:1409599-1409748 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr6:1534798-1534947 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 122

Conread position: 3-154
Cow position: chr6:1820845-1820995 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr6:2876901-2877050 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 3-154
Cow position: chr6:3486641-3486791 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 3-154
Cow position: chr6:3572378-3572228 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr6:3887733-3887884 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 130

Conread position: 3-154
Cow position: chr6:5749708-5749558 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr6:5947994-5948146 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 131

Conread position: 3-154
Cow position: chr6:7139557-7139707 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr6:8203978-8203823 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 3-154
Cow position: chr6:10338864-10339008 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 3-154
Cow position: chr6:10610626-10610478 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 125, 0

Conread position: 3-154
Cow position: chr6:11269663-11269812 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 130, 0

Conread position: 3-154
Cow position: chr6:11723416-11723565 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr6:12664537-12664687 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr6:14390712-14390562 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr6:15139390-15139540 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr6:16591740-16591590 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr6:17048124-17047974 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 128, 0

Conread position: 3-154
Cow position: chr6:17596512-17596662 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr6:24241188-24241038 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr6:26669079-26669229 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr6:27171363-27171214 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 3-154
Cow position: chr6:27528236-27528386 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr6:28187055-28187205 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr6:28489786-28489936 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr6:28642755-28642905 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr6:28702926-28703076 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr6:30273110-30273260 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr6:35874930-35875077 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 3-154
Cow position: chr6:36528981-36528831 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr6:39911112-39910965 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 3-154
Cow position: chr6:40276866-40276716 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr6:40378848-40378997 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr6:40552799-40552948 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 3-154
Cow position: chr6:41229227-41229077 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr6:43619507-43619357 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr6:44002454-44002305 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 3-154
Cow position: chr6:51716316-51716166 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr6:51731861-51731714 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 3-154
Cow position: chr6:52694809-52694659 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr6:53543880-53543730 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr6:57471446-57471301 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 3-154
Cow position: chr6:62578415-62578566 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 140

Conread position: 3-154
Cow position: chr6:62663500-62663350 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr6:64718102-64717953 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 21

Conread position: 3-154
Cow position: chr6:65843399-65843249 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr6:68028930-68028780 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-155
Cow position: chr6:66233583-66233431 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-156
Cow position: chr6:49822-49974 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 137, 0

Conread position: 3-157
Cow position: chr6:26777386-26777539 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 3-159
Cow position: chr6:34890347-34890498 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 4-145
Cow position: chr6:25361088-25360949 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 4-154
Cow position: chr6:38273351-38273202 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 5-154
Cow position: chr6:10249825-10249974 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 128

Conread position: 5-154
Cow position: chr6:39333088-39333238 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 5-154
Cow position: chr6:45587729-45587581 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 137, 0

Conread position: 11-155
Cow position: chr6:67213498-67213643 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 13-140
Cow position: chr6:2580192-2580067 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 13-150
Cow position: chr6:7177520-7177655 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 111, 0

Conread position: 15-140
Cow position: chr6:7193395-7193520 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-136
Cow position: chr7:41874394-41874529 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-140
Cow position: chr7:7362-7225 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 129, 65

Conread position: 1-152
Cow position: chr7:21313783-21313636 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 1-154
Cow position: chr7:31095388-31095540 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 143, 0

Conread position: 2-123
Cow position: chr7:68896526-68896407 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 44

Conread position: 2-140
Cow position: chr7:47974423-47974558 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 20

Conread position: 3-135
Cow position: chr7:3121870-3121739 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 3-137
Cow position: chr7:37021924-37021790 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 90

Conread position: 3-138
Cow position: chr7:20773470-20773605 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr7:112482-112345 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr7:6627532-6627669 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr7:6629428-6629564 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 3-140
Cow position: chr7:13532034-13532171 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr7:19045576-19045710 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 3-140
Cow position: chr7:27100417-27100554 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-151
Cow position: chr7:63949195-63949343 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 125, 94

Conread position: 3-152
Cow position: chr7:14037-14185 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 139, 0

Conread position: 3-152
Cow position: chr7:34220975-34221122 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 3-153
Cow position: chr7:546710-546561 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-153
Cow position: chr7:7260392-7260243 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr7:444387-444535 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr7:526820-526670 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr7:949418-949266 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 3-154
Cow position: chr7:1368810-1368957 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 129, 16

Conread position: 3-154
Cow position: chr7:1608763-1608913 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 3-154
Cow position: chr7:5308233-5308383 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr7:6646517-6646667 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr7:8143103-8143253 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr7:8337236-8337087 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 3-154
Cow position: chr7:10429551-10429701 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr7:11462265-11462415 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr7:14137720-14137870 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr7:20061357-20061210 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 3-154
Cow position: chr7:20513914-20514064 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr7:20797579-20797729 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr7:21125804-21125955 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 130

Conread position: 3-154
Cow position: chr7:21987278-21987127 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 122

Conread position: 3-154
Cow position: chr7:24806613-24806761 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 64

Conread position: 3-154
Cow position: chr7:24853581-24853730 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 3-154
Cow position: chr7:27458856-27459006 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr7:30117618-30117764 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 3-154
Cow position: chr7:33066853-33067003 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 130, 0

Conread position: 3-154
Cow position: chr7:33311074-33311223 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr7:33333436-33333287 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 3-154
Cow position: chr7:34150813-34150664 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 3-154
Cow position: chr7:34416475-34416624 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 3-154
Cow position: chr7:34487787-34487637 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr7:37010095-37010245 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr7:37164736-37164586 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr7:38398691-38398541 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr7:39793730-39793580 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr7:45947278-45947429 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 129, 140

Conread position: 3-154
Cow position: chr7:46747864-46747714 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr7:48804562-48804712 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr7:52764159-52764009 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr7:54649774-54649624 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr7:55040612-55040762 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr7:55536051-55536203 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 138, 0

Conread position: 3-154
Cow position: chr7:60728583-60728733 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr7:61579374-61579225 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 111, 0

Conread position: 3-154
Cow position: chr7:61809882-61809732 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 128, 0

Conread position: 3-154
Cow position: chr7:62445278-62445428 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 3-154
Cow position: chr7:63387607-63387457 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 129, 117

Conread position: 3-154
Cow position: chr7:65812697-65812547 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr7:66070256-66070406 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr7:66573133-66573282 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 130, 0

Conread position: 3-154
Cow position: chr7:66907120-66906968 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 3-157
Cow position: chr7:6802140-6802293 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 144, 0

Conread position: 3-157
Cow position: chr7:27788829-27788676 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 137, 0

Conread position: 3-157
Cow position: chr7:39133353-39133207 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 3-157
Cow position: chr7:64247716-64247868 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 4-122
Cow position: chr7:29364589-29364707 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-154
Cow position: chr7:6665359-6665210 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 138, 0

Conread position: 4-154
Cow position: chr7:33070539-33070688 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 128, 0

Conread position: 4-154
Cow position: chr7:40321136-40320990 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 51, 118

Conread position: 4-154
Cow position: chr7:42872016-42871866 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 72

Conread position: 4-154
Cow position: chr7:58337174-58337323 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 4-154
Cow position: chr7:64239119-64239268 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 7-134
Cow position: chr7:29472328-29472200 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 8-153
Cow position: chr7:59685679-59685538 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 9-154
Cow position: chr7:26928311-26928454 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 14-154
Cow position: chr7:3126551-3126413 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 1-137
Cow position: chr8:18054790-18054657 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 1-154
Cow position: chr8:6725926-6726076 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 133

Conread position: 2-140
Cow position: chr8:24870420-24870559 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 129, 0

Conread position: 2-154
Cow position: chr8:11803872-11803722 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 2-154
Cow position: chr8:16090894-16090743 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 128, 0

Conread position: 3-130
Cow position: chr8:36786747-36786874 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-135
Cow position: chr8:21205599-21205467 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr8:8516539-8516675 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 3-140
Cow position: chr8:21156731-21156868 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr8:47674896-47674759 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr8:53902856-53902719 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-152
Cow position: chr8:14589817-14589966 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-152
Cow position: chr8:23772693-23772545 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 140, 0

Conread position: 3-154
Cow position: chr8:1321077-1320927 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr8:1347190-1347340 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr8:2168459-2168610 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 123

Conread position: 3-154
Cow position: chr8:3748141-3748290 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr8:3786690-3786540 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr8:3854964-3855114 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr8:4688461-4688310 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 122

Conread position: 3-154
Cow position: chr8:8400042-8400194 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 39, 131

Conread position: 3-154
Cow position: chr8:9943866-9944016 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 122, 0

Conread position: 3-154
Cow position: chr8:10741586-10741735 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 3-154
Cow position: chr8:10750407-10750257 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr8:11776678-11776528 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 112

Conread position: 3-154
Cow position: chr8:12451101-12450952 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 106, 0

Conread position: 3-154
Cow position: chr8:14257140-14256990 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr8:14926825-14926974 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 121, 36

Conread position: 3-154
Cow position: chr8:21251286-21251136 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr8:22570244-22570394 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr8:24191026-24190876 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr8:24914261-24914411 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr8:25524452-25524302 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr8:29923291-29923440 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 3-154
Cow position: chr8:32317494-32317646 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 119, 131

Conread position: 3-154
Cow position: chr8:32436016-32436169 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 142

Conread position: 3-154
Cow position: chr8:32629973-32630123 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 3-154
Cow position: chr8:33326111-33325961 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 3-154
Cow position: chr8:34349731-34349581 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr8:35471362-35471212 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr8:36634444-36634598 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 104

Conread position: 3-154
Cow position: chr8:37655495-37655645 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 122, 0

Conread position: 3-154
Cow position: chr8:39820512-39820362 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr8:41643626-41643776 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr8:42428444-42428594 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr8:44701042-44700892 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 131

Conread position: 3-154
Cow position: chr8:45357503-45357650 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr8:45793696-45793844 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chr8:47067760-47067906 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 3-154
Cow position: chr8:47660261-47660411 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr8:47887904-47887754 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 130, 0

Conread position: 3-154
Cow position: chr8:49218802-49218650 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr8:50929045-50929195 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chr8:50995847-50995697 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 128, 0

Conread position: 3-154
Cow position: chr8:51067937-51068087 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr8:59260888-59261038 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr8:60062469-60062319 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr8:60920864-60920714 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr8:61033412-61033263 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 3-157
Cow position: chr8:12313343-12313496 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 0

Conread position: 3-157
Cow position: chr8:25774587-25774741 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-157
Cow position: chr8:42485968-42485817 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 3-157
Cow position: chr8:44241631-44241784 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 140, 0

Conread position: 4-139
Cow position: chr8:49294998-49295128 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 4-140
Cow position: chr8:18210396-18210530 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 62

Conread position: 4-154
Cow position: chr8:8912783-8912634 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 138, 0

Conread position: 4-178
Cow position: chr8:29032914-29033087 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 128

Conread position: 4-202
Cow position: chr8:5661784-5661978 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 142, 47

Conread position: 5-151
Cow position: chr8:36920407-36920264 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 5-154
Cow position: chr8:30156157-30156011 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 5-157
Cow position: chr8:45158468-45158620 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 7-154
Cow position: chr8:46059916-46060062 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 135, 0

Conread position: 8-141
Cow position: chr8:55086602-55086469 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-154
Cow position: chr8:2887806-2887662 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 133, 0

Conread position: 10-154
Cow position: chr8:25378030-25377887 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 132, 0

Conread position: 10-154
Cow position: chr8:38392679-38392536 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 1-140
Cow position: chr9:20175998-20176137 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-154
Cow position: chr9:29333292-29333145 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 1-154
Cow position: chr9:59509446-59509598 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 132, 0

Conread position: 1-162
Cow position: chr9:3728544-3728383 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 131, 16

Conread position: 2-140
Cow position: chr9:42311405-42311267 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 2-145
Cow position: chr9:37066574-37066432 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 2-154
Cow position: chr9:45875228-45875080 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 3-135
Cow position: chr9:9647854-9647722 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-139
Cow position: chr9:129483-129619 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr9:2679985-2679848 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr9:29626716-29626850 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 3-145
Cow position: chr9:28679668-28679524 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 126, 0

Conread position: 3-152
Cow position: chr9:49303006-49303154 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 139, 0

Conread position: 3-152
Cow position: chr9:49456865-49456717 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 3-153
Cow position: chr9:779109-779258 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-153
Cow position: chr9:18508116-18508262 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 3-154
Cow position: chr9:203581-203731 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr9:1250285-1250435 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr9:1994694-1994844 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr9:2212852-2212703 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 117, 0

Conread position: 3-154
Cow position: chr9:3310326-3310177 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 3-154
Cow position: chr9:4942091-4942245 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 143

Conread position: 3-154
Cow position: chr9:5005699-5005548 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 138

Conread position: 3-154
Cow position: chr9:6250997-6250847 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr9:6709671-6709521 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr9:8781215-8781365 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr9:14001768-14001620 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 3-154
Cow position: chr9:17304263-17304413 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr9:19157816-19157970 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 3-154
Cow position: chr9:25904234-25904084 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr9:27036613-27036463 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr9:27783898-27783748 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr9:28023512-28023363 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 3-154
Cow position: chr9:29026212-29026364 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr9:30828453-30828304 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 3-154
Cow position: chr9:31066431-31066281 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr9:31090890-31090740 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 70

Conread position: 3-154
Cow position: chr9:31809289-31809138 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 57, 138

Conread position: 3-154
Cow position: chr9:37161104-37161251 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 3-154
Cow position: chr9:38677857-38677707 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr9:46041539-46041689 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr9:47004444-47004294 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 22

Conread position: 3-154
Cow position: chr9:47043673-47043523 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr9:48149984-48149834 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 130, 0

Conread position: 3-154
Cow position: chr9:50792428-50792278 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr9:51180467-51180617 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chr9:51212395-51212244 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 140

Conread position: 3-154
Cow position: chr9:56302739-56302889 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chr9:64014959-64015109 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-156
Cow position: chr9:31112838-31112687 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-157
Cow position: chr9:30674090-30673939 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 4-139
Cow position: chr9:17313087-17312954 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 4-154
Cow position: chr9:4307658-4307804 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 134, 41

Conread position: 4-154
Cow position: chr9:7060354-7060502 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 4-154
Cow position: chr9:21411017-21410868 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 128, 0

Conread position: 5-139
Cow position: chr9:26737632-26737496 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 5-154
Cow position: chr9:9014781-9014633 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 5-154
Cow position: chr9:34769855-34769706 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-154
Cow position: chr9:1982535-1982388 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 9-150
Cow position: chr9:50774452-50774308 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 65, 125

Conread position: 9-157
Cow position: chr9:650318-650465 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 9-178
Cow position: chr9:54926236-54926074 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 17-154
Cow position: chr9:50093538-50093674 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 125, 0

Conread position: 1-141
Cow position: chrX:41887365-41887504 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 115, 0

Conread position: 2-140
Cow position: chrX:24111142-24111278 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 2-140
Cow position: chrX:47395628-47395763 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 2-154
Cow position: chrX:3374288-3374439 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 2-154
Cow position: chrX:21491781-21491629 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 130, 141

Conread position: 2-154
Cow position: chrX:27962451-27962300 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 131, 0

Conread position: 3-126
Cow position: chrX:27618516-27618639 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-136
Cow position: chrX:13180927-13181058 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 112
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 3-137
Cow position: chrX:26765578-26765711 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 3-140
Cow position: chrX:14596464-14596330 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 3-140
Cow position: chrX:16709592-16709455 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chrX:27496333-27496193 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 3-140
Cow position: chrX:31511242-31511108 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 3-150
Cow position: chrX:4412476-4412329 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 140

Conread position: 3-151
Cow position: chrX:2561236-2561383 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 129, 0

Conread position: 3-151
Cow position: chrX:15262003-15262151 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-152
Cow position: chrX:16780902-16780753 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-152
Cow position: chrX:28586601-28586453 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-153
Cow position: chrX:7032073-7031924 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 3-153
Cow position: chrX:21643297-21643441 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 3-154
Cow position: chrX:322084-321935 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 3-154
Cow position: chrX:673587-673737 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:972398-972244 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 117, 0

Conread position: 3-154
Cow position: chrX:1548596-1548450 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 3-154
Cow position: chrX:1941746-1941896 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:2010998-2011139 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 3-154
Cow position: chrX:2578042-2577892 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:2814863-2815013 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:2857757-2857907 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:3083517-3083669 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 3-154
Cow position: chrX:3467027-3467177 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:5282165-5282314 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 3-154
Cow position: chrX:5356204-5356353 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 3-154
Cow position: chrX:5393227-5393377 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:6871455-6871606 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 140

Conread position: 3-154
Cow position: chrX:7095088-7094938 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:9009956-9009806 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:10530170-10530320 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chrX:11147713-11147863 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:11423491-11423341 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chrX:11463427-11463577 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:12344561-12344411 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:12652885-12653035 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:13075083-13075233 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:13095644-13095794 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:13411510-13411658 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 3-154
Cow position: chrX:13447206-13447356 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:15622884-15623034 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:15979339-15979488 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 3-154
Cow position: chrX:16277269-16277119 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:16361500-16361650 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 144, 0

Conread position: 3-154
Cow position: chrX:16684216-16684366 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:16701311-16701161 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chrX:17053171-17053021 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:18536019-18535870 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 130, 0

Conread position: 3-154
Cow position: chrX:18952057-18952208 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-154
Cow position: chrX:20034781-20034931 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:20332940-20333090 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:20724586-20724436 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chrX:20798917-20798773 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 3-154
Cow position: chrX:21225091-21224942 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 3-154
Cow position: chrX:21507548-21507698 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:21581106-21580955 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 122

Conread position: 3-154
Cow position: chrX:21752822-21752972 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chrX:21792234-21792084 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:22489776-22489626 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chrX:22617585-22617735 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:23278643-23278493 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chrX:23388916-23389065 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 121, 0

Conread position: 3-154
Cow position: chrX:23454399-23454549 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 137, 0

Conread position: 3-154
Cow position: chrX:24323945-24324095 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:24771242-24771392 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:26398506-26398656 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:27084593-27084442 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-154
Cow position: chrX:27316898-27316748 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chrX:27424702-27424852 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 3-154
Cow position: chrX:27592369-27592520 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 140

Conread position: 3-154
Cow position: chrX:28665015-28664865 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:28757024-28757174 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:29095706-29095856 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:29172147-29172297 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:29852098-29852248 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chrX:29909805-29909957 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 116, 141

Conread position: 3-154
Cow position: chrX:30012619-30012469 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:30068224-30068372 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 3-154
Cow position: chrX:30168459-30168608 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 3-154
Cow position: chrX:30182307-30182458 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 130

Conread position: 3-154
Cow position: chrX:30201117-30201267 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:30436464-30436314 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:32065549-32065698 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 3-154
Cow position: chrX:33536189-33536039 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 130, 0

Conread position: 3-154
Cow position: chrX:35531475-35531325 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:37957435-37957585 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:38149211-38149061 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chrX:39562332-39562482 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 3-154
Cow position: chrX:41849604-41849754 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 3-154
Cow position: chrX:42477196-42477345 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 113, 0

Conread position: 3-154
Cow position: chrX:45376365-45376519 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 3-156
Cow position: chrX:17476800-17476952 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 3-157
Cow position: chrX:9094263-9094110 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 3-157
Cow position: chrX:30230491-30230638 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 3-160
Cow position: chrX:10414516-10414667 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 141, 87

Conread position: 3-167
Cow position: chrX:3142335-3142176 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 3-175
Cow position: chrX:9126701-9126529 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 4-154
Cow position: chrX:6281164-6281313 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 129, 0

Conread position: 4-154
Cow position: chrX:23020914-23020765 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 128, 0

Conread position: 4-154
Cow position: chrX:28505650-28505799 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 138, 0

Conread position: 4-154
Cow position: chrX:28520986-28521135 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 138, 0

Conread position: 5-154
Cow position: chrX:21831131-21830984 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 5-154
Cow position: chrX:45418630-45418778 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 128, 0

Conread position: 7-140
Cow position: chrX:35939412-35939546 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 9-140
Cow position: chrX:19620964-19620835 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 9-154
Cow position: chrX:2481019-2481163 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 9-154
Cow position: chrX:17666184-17666328 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 9-171
Cow position: chrX:23524747-23524910 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 128, 0

Conread position: 11-154
Cow position: chrX:30834130-30833989 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 13-140
Cow position: chrX:43073368-43073243 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 15-154
Cow position: chrX:37850739-37850601 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 21-140
Cow position: chrX:36724856-36724974 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 21-154
Cow position: chrX:26529566-26529434 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 111, 0