Cow genome map

Conread name: Ss1.1-Pig4-TMW8034E14.3

Conread position: 1-132
Cow position: chr1:93517405-93517275 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-151
Cow position: chr1:61025193-61025048 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 126
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-151
Cow position: chr1:102551510-102551365 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 1-153
Cow position: chr1:98616291-98616435 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-156
Cow position: chr1:46838306-46838154 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 40

Conread position: 1-157
Cow position: chr1:41518318-41518466 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-157
Cow position: chr1:98657434-98657585 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-158
Cow position: chr1:53310133-53310285 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 1-159
Cow position: chr1:3932739-3932892 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-159
Cow position: chr1:31415701-31415853 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 1-162
Cow position: chr1:67832631-67832787 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 132
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr1:82478492-82478340 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr1:87723176-87723329 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-173
Cow position: chr1:30693586-30693419 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr1:30716179-30716347 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr1:51966791-51966615 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 38

Conread position: 1-174
Cow position: chr1:56166034-56165869 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 132, 38

Conread position: 1-174
Cow position: chr1:91104504-91104339 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chr1:56725668-56725499 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:5300582-5300752 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:8556194-8556025 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 145
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:9261008-9260842 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:9525847-9526012 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:10725128-10724958 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:11290102-11290267 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:15437415-15437581 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:17010187-17010356 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:17438558-17438726 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:18963219-18963391 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 127, 34

Conread position: 1-176
Cow position: chr1:19237004-19237171 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:20831357-20831194 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:22252193-22252023 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:22631507-22631673 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:26585632-26585463 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:28175698-28175868 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:28713547-28713377 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 145
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:29364915-29364745 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:29533953-29534122 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 29, 0

Conread position: 1-176
Cow position: chr1:30104056-30104226 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:32962185-32962019 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr1:33853789-33853619 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:33898771-33898602 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 29, 0

Conread position: 1-176
Cow position: chr1:39546285-39546114 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 118, 38

Conread position: 1-176
Cow position: chr1:40057621-40057451 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:40577440-40577270 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:40682221-40682400 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 54, 30

Conread position: 1-176
Cow position: chr1:55274532-55274699 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr1:56620743-56620573 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:56631149-56630980 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 1-176
Cow position: chr1:57422308-57422474 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:58274497-58274327 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 104, 38

Conread position: 1-176
Cow position: chr1:59206565-59206735 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 21, 38

Conread position: 1-176
Cow position: chr1:59484352-59484520 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:65570594-65570764 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:67000408-67000578 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:67003662-67003496 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:69025475-69025645 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:69769093-69768916 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 58, 38

Conread position: 1-176
Cow position: chr1:71560239-71560406 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:73434822-73434989 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:73439687-73439857 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:74303856-74304025 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:76877538-76877368 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:77747249-77747080 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:82655154-82654985 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:82910321-82910484 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 1-176
Cow position: chr1:84442488-84442657 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:85794476-85794305 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 145
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 96, 38

Conread position: 1-176
Cow position: chr1:86545633-86545800 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:86593796-86593966 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:89493719-89493882 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 1-176
Cow position: chr1:90606351-90606517 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr1:90973457-90973287 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:91672375-91672545 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 145
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:93857024-93856857 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr1:99989009-99988839 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr1:100509259-100509085 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 155, 43

Conread position: 1-177
Cow position: chr1:17034085-17034253 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr1:27989921-27990091 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr1:30494446-30494280 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr1:30532514-30532680 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr1:40533532-40533697 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr1:56191645-56191812 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 1-177
Cow position: chr1:68603120-68603292 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 104, 38

Conread position: 1-177
Cow position: chr1:73019437-73019610 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 29

Conread position: 1-177
Cow position: chr1:86362974-86362809 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 1-177
Cow position: chr1:86704653-86704488 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 1-178
Cow position: chr1:53310745-53310578 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:5504444-5504270 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:6197789-6197963 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:8827569-8827395 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:9378029-9378202 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr1:13252012-13252186 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:14529951-14530123 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr1:17939250-17939422 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr1:18195129-18194955 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:18239274-18239451 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 70

Conread position: 1-180
Cow position: chr1:19183801-19183971 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:21089953-21089779 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr1:21114898-21115068 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 24

Conread position: 1-180
Cow position: chr1:21995506-21995680 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr1:22907368-22907197 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 1-180
Cow position: chr1:23054926-23054754 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:23657678-23657504 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr1:25054790-25054619 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:26515868-26516039 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr1:26812568-26812734 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:27310528-27310697 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 1-180
Cow position: chr1:28568203-28568373 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:30075385-30075212 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 134, 38

Conread position: 1-180
Cow position: chr1:31239723-31239896 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:34695205-34695029 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 25, 39

Conread position: 1-180
Cow position: chr1:38477820-38477645 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 71, 38

Conread position: 1-180
Cow position: chr1:44087010-44087182 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:48249407-48249236 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:49971648-49971818 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr1:52336452-52336626 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:53366431-53366257 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:53422405-53422224 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 120, 34

Conread position: 1-180
Cow position: chr1:55328892-55329063 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr1:55779088-55778914 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:56141850-56142018 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:57525566-57525405 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:57570342-57570168 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 122, 38

Conread position: 1-180
Cow position: chr1:57744701-57744874 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 87, 33

Conread position: 1-180
Cow position: chr1:57948570-57948396 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:58339434-58339263 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:61343205-61343374 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:63603281-63603452 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:65388787-65388615 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:66487734-66487560 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:69246344-69246171 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:69405521-69405347 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:72113513-72113338 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 125, 38

Conread position: 1-180
Cow position: chr1:72985964-72985794 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:73064831-73065005 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:73763089-73763261 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 161, 34

Conread position: 1-180
Cow position: chr1:74284168-74284341 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:76618966-76619137 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:76749462-76749633 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:77104523-77104700 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 27

Conread position: 1-180
Cow position: chr1:79634048-79634219 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr1:81778960-81778788 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:81861510-81861681 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 9, 39

Conread position: 1-180
Cow position: chr1:82921645-82921823 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 97, 43

Conread position: 1-180
Cow position: chr1:85777944-85778118 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:88133284-88133110 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:88675987-88675816 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 1-180
Cow position: chr1:89111125-89110950 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 39

Conread position: 1-180
Cow position: chr1:89186935-89187109 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:89768020-89768194 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 147
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:91901531-91901364 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr1:94662184-94662010 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:99629963-99630134 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 44

Conread position: 1-180
Cow position: chr1:99915940-99915769 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr1:100708581-100708407 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 136, 38

Conread position: 1-180
Cow position: chr1:102432517-102432691 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-181
Cow position: chr1:19484485-19484655 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-181
Cow position: chr1:86507121-86507294 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-196
Cow position: chr1:23754807-23754998 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 193, 38

Conread position: 1-203
Cow position: chr1:7826476-7826281 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 2-163
Cow position: chr1:30064867-30064712 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 2-172
Cow position: chr1:70389033-70389198 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 2-176
Cow position: chr1:29036825-29036656 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr1:57971066-57971235 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr1:58171259-58171102 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr1:65782810-65782979 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 2-176
Cow position: chr1:82566604-82566435 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr1:99017556-99017722 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 2-177
Cow position: chr1:33714595-33714423 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr1:11855774-11855941 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr1:89124880-89124707 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 145
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 37, 0

Conread position: 3-148
Cow position: chr1:61537494-61537635 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 120, 54

Conread position: 3-175
Cow position: chr1:6771061-6770897 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 3-176
Cow position: chr1:30439350-30439182 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr1:67911064-67910896 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 3-177
Cow position: chr1:76094355-76094525 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 109, 36

Conread position: 3-180
Cow position: chr1:32627913-32627736 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 104, 36

Conread position: 3-180
Cow position: chr1:52511793-52511625 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr1:77464606-77464434 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr1:98094880-98094708 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 3-181
Cow position: chr1:53396028-53395845 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 36

Conread position: 4-177
Cow position: chr1:21378056-21378226 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 56, 35

Conread position: 4-180
Cow position: chr1:31363596-31363763 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 4-180
Cow position: chr1:52356746-52356917 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr1:72086008-72085837 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 5-180
Cow position: chr1:79454467-79454636 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 6-177
Cow position: chr1:72184364-72184530 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 6-180
Cow position: chr1:27543643-27543471 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 112, 29

Conread position: 7-180
Cow position: chr1:27955931-27956101 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 119, 32

Conread position: 9-175
Cow position: chr1:40747516-40747676 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 9-176
Cow position: chr1:99108740-99108901 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 10-176
Cow position: chr1:18281209-18281041 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 34

Conread position: 14-180
Cow position: chr1:32565431-32565589 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 14-180
Cow position: chr1:40965904-40966063 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 14-180
Cow position: chr1:62803380-62803541 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 134
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 14-180
Cow position: chr1:62922052-62921896 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 15-180
Cow position: chr1:56423801-56423959 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 24

Conread position: 17-160
Cow position: chr1:24441553-24441693 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 102, 22

Conread position: 20-174
Cow position: chr1:81869237-81869384 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 21-176
Cow position: chr1:58512515-58512364 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 28-177
Cow position: chr1:79254550-79254401 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 30

Conread position: 29-180
Cow position: chr1:47160921-47161066 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 36-176
Cow position: chr1:4210589-4210453 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 36-177
Cow position: chr1:101011444-101011582 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 36-180
Cow position: chr1:16117415-16117271 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 84, 21

Conread position: 36-180
Cow position: chr1:92554624-92554761 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 48-176
Cow position: chr1:32757444-32757316 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 49-180
Cow position: chr1:97225103-97225235 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 52-176
Cow position: chr1:70417389-70417512 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 52-180
Cow position: chr1:29040697-29040571 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 59-176
Cow position: chr1:42890593-42890710 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 59-176
Cow position: chr1:79112906-79112789 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 59-176
Cow position: chr1:81289593-81289479 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 59-180
Cow position: chr1:33549231-33549349 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 59-180
Cow position: chr1:36539964-36539844 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 59-180
Cow position: chr1:82862971-82862849 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 59-180
Cow position: chr1:100593766-100593887 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 71-176
Cow position: chr1:21306779-21306674 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-147
Cow position: chr10:8681152-8681011 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 122
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-157
Cow position: chr10:5868032-5868183 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 130
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-157
Cow position: chr10:30682960-30683111 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-159
Cow position: chr10:62406242-62406392 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 1-161
Cow position: chr10:21426771-21426923 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr10:33868655-33868811 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1-174
Cow position: chr10:48745283-48745450 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 146, 38

Conread position: 1-175
Cow position: chr10:1663433-1663598 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr10:278821-278991 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:6287278-6287108 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:7895953-7896120 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr10:11109138-11109308 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:12546516-12546346 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:13851675-13851505 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:14865384-14865214 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:15489073-15488905 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:17958613-17958443 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:19493423-19493593 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:21738197-21738367 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:23848494-23848324 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:25564024-25564191 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:25650889-25651052 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:26292957-26293127 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:28947995-28947826 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 1-176
Cow position: chr10:30688528-30688346 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 57, 38

Conread position: 1-176
Cow position: chr10:30719221-30719054 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:31856011-31855841 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:32008606-32008437 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr10:37127257-37127423 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 1-176
Cow position: chr10:38342833-38343008 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 40

Conread position: 1-176
Cow position: chr10:39038529-39038694 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:39210292-39210122 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr10:39813863-39814033 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:40348125-40348295 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:40642471-40642302 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:41140483-41140650 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:41159950-41159783 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:41569633-41569470 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:41879468-41879298 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr10:44706179-44706348 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:51086035-51085865 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:52827083-52827253 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:53172789-53172959 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr10:54929444-54929612 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 136, 33

Conread position: 1-176
Cow position: chr10:57554807-57554977 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr10:1380030-1379861 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 1-177
Cow position: chr10:2243489-2243323 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 1-177
Cow position: chr10:15620851-15621023 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 122, 38

Conread position: 1-177
Cow position: chr10:18040530-18040348 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 171

Conread position: 1-177
Cow position: chr10:21450670-21450836 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 138, 38

Conread position: 1-177
Cow position: chr10:22907679-22907847 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 1-177
Cow position: chr10:37074375-37074538 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr10:47156248-47156077 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1-177
Cow position: chr10:61133673-61133501 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 33

Conread position: 1-178
Cow position: chr10:20538836-20538668 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 1-179
Cow position: chr10:22104019-22103850 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:2118495-2118669 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:4500488-4500321 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:7279570-7279740 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr10:8292657-8292488 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:8324600-8324774 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:10584658-10584490 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:14333313-14333487 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:15831543-15831711 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 1-180
Cow position: chr10:16928687-16928521 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:21489474-21489305 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:21516481-21516652 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 1-180
Cow position: chr10:23409929-23409755 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr10:25340685-25340511 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr10:28031397-28031571 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:29844149-29844313 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:32280378-32280204 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:32703294-32703120 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:36513921-36513753 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 1-180
Cow position: chr10:37772421-37772250 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 1-180
Cow position: chr10:38543384-38543553 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:39440688-39440519 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:39776475-39776640 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr10:41635914-41635739 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 20, 39

Conread position: 1-180
Cow position: chr10:42115787-42115613 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 108, 41

Conread position: 1-180
Cow position: chr10:47909151-47908980 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:48170058-48169889 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:51557928-51557754 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:53319732-53319901 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr10:57987171-57987345 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr10:63625590-63625420 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 1-180
Cow position: chr10:68097084-68097258 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 149
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 38, 0

Conread position: 1-181
Cow position: chr10:38723803-38723631 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 1-181
Cow position: chr10:39876909-39877083 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 38

Conread position: 1-182
Cow position: chr10:29107250-29107423 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-186
Cow position: chr10:24975304-24975484 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 118, 14

Conread position: 2-169
Cow position: chr10:39443821-39443983 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 37

Conread position: 2-175
Cow position: chr10:20268165-20268332 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 2-175
Cow position: chr10:36467329-36467497 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr10:6254928-6255089 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr10:21080398-21080225 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 120, 42

Conread position: 2-176
Cow position: chr10:22344005-22343831 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 61

Conread position: 2-176
Cow position: chr10:24309663-24309832 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr10:32364470-32364302 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 2-176
Cow position: chr10:35824813-35824982 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 144
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr10:48374916-48375085 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 2-176
Cow position: chr10:51950569-51950735 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr10:19142081-19142253 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 2-180
Cow position: chr10:21897122-21897289 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 2-180
Cow position: chr10:24294750-24294921 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 38

Conread position: 2-180
Cow position: chr10:50017830-50018001 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 8, 38

Conread position: 2-186
Cow position: chr10:58095508-58095688 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 3-175
Cow position: chr10:32318981-32318820 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 92, 14

Conread position: 3-180
Cow position: chr10:39849697-39849884 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 36

Conread position: 3-182
Cow position: chr10:50314162-50313988 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 4-176
Cow position: chr10:32086215-32086050 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 4-176
Cow position: chr10:35024192-35024025 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 4-176
Cow position: chr10:38842692-38842525 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr10:19513757-19513589 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 6-176
Cow position: chr10:58600047-58599885 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 7-172
Cow position: chr10:37108909-37108748 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 7-181
Cow position: chr10:38850779-38850613 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 153, 33

Conread position: 9-180
Cow position: chr10:22618888-22619050 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 14-176
Cow position: chr10:46762723-46762570 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 14-180
Cow position: chr10:20381433-20381593 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 142, 28

Conread position: 18-176
Cow position: chr10:44103650-44103498 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 19-201
Cow position: chr10:25531594-25531778 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 158, 43

Conread position: 20-162
Cow position: chr10:6536240-6536100 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 20-180
Cow position: chr10:53980424-53980576 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 25-180
Cow position: chr10:20373904-20374058 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 14

Conread position: 30-180
Cow position: chr10:55095770-55095625 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 41-176
Cow position: chr10:12101889-12102023 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 52-174
Cow position: chr10:42335137-42335259 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 52-180
Cow position: chr10:60362314-60362193 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 59-169
Cow position: chr10:48396637-48396746 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 59-180
Cow position: chr10:55401233-55401112 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 102

Conread position: 59-226
Cow position: chr10:55010183-55010014 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 118, 132

Conread position: 61-169
Cow position: chr10:41654773-41654669 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 61-180
Cow position: chr10:8458411-8458292 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 72-176
Cow position: chr10:42633378-42633274 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-139
Cow position: chr11:19061908-19062041 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-143
Cow position: chr11:35143152-35143295 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 61, 38

Conread position: 1-145
Cow position: chr11:49012894-49013033 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-150
Cow position: chr11:50835446-50835590 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 123
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-155
Cow position: chr11:3227903-3227754 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-156
Cow position: chr11:73467248-73467398 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-157
Cow position: chr11:32478646-32478797 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-159
Cow position: chr11:10699580-10699730 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-160
Cow position: chr11:25099003-25099157 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 132
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr11:87138048-87138214 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chr11:41422739-41422908 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:418552-418724 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 104, 46

Conread position: 1-176
Cow position: chr11:1487943-1488110 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:2350119-2349949 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr11:3495151-3494981 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:4025330-4025499 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 127, 38

Conread position: 1-176
Cow position: chr11:7121797-7121967 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:8444953-8445123 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:9223153-9223323 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:9732508-9732675 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:10957987-10957826 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:12504680-12504848 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 1-176
Cow position: chr11:17105515-17105682 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:19100315-19100485 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr11:20732056-20732222 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr11:26549666-26549499 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:28124681-28124511 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:28227611-28227773 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:30201523-30201688 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:30254396-30254231 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 145
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:38575316-38575486 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:38600768-38600935 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:41744727-41744557 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:44515782-44515950 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 29, 0

Conread position: 1-176
Cow position: chr11:47737375-47737541 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:47973685-47973855 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:52421636-52421469 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:52845711-52845541 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:57626007-57626177 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:63391309-63391479 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:67446073-67446243 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr11:67452821-67452651 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr11:75392419-75392249 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:78791898-78792068 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr11:84966284-84966114 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 145
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr11:7118580-7118409 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr11:15126984-15126813 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr11:26122751-26122922 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr11:28393058-28392886 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 107, 47

Conread position: 1-177
Cow position: chr11:30121479-30121647 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1-177
Cow position: chr11:39585555-39585726 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr11:59370432-59370260 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 97, 38

Conread position: 1-177
Cow position: chr11:66731323-66731155 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 41

Conread position: 1-177
Cow position: chr11:76565616-76565447 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 1-179
Cow position: chr11:24395482-24395313 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:2834457-2834276 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 26, 42

Conread position: 1-180
Cow position: chr11:4033230-4033399 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr11:4054131-4054303 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:4267979-4268149 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:5982301-5982127 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 1-180
Cow position: chr11:7228420-7228249 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:7318085-7317915 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr11:7720219-7720389 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:8265695-8265514 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 58

Conread position: 1-180
Cow position: chr11:9080378-9080552 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 135, 38

Conread position: 1-180
Cow position: chr11:10850287-10850116 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:11591136-11590961 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 1-180
Cow position: chr11:12095961-12095787 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr11:12356228-12356401 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 1-180
Cow position: chr11:12950981-12951158 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 145, 40

Conread position: 1-180
Cow position: chr11:15987423-15987249 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:15994332-15994158 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr11:22934423-22934595 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 137, 38

Conread position: 1-180
Cow position: chr11:23882177-23882003 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:24292623-24292452 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:26068892-26069061 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:29666421-29666592 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:31928339-31928168 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr11:32078613-32078787 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:33602463-33602637 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:37280515-37280688 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 1-180
Cow position: chr11:41168528-41168702 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr11:44254243-44254077 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:45107022-45106844 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 112, 38

Conread position: 1-180
Cow position: chr11:47758094-47758268 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 81, 38

Conread position: 1-180
Cow position: chr11:49172334-49172506 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:53429855-53430029 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:67155803-67155631 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:71331669-71331498 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:82347243-82347408 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr11:85391657-85391831 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-201
Cow position: chr11:4061700-4061894 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 123, 38

Conread position: 2-162
Cow position: chr11:10092840-10092687 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 119, 37

Conread position: 2-171
Cow position: chr11:52935548-52935379 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 52

Conread position: 2-172
Cow position: chr11:78357946-78357783 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 2-174
Cow position: chr11:13063818-13063985 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr11:7109243-7109409 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 2-176
Cow position: chr11:32454227-32454058 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr11:35862462-35862631 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr11:73135470-73135303 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 2-177
Cow position: chr11:21897520-21897683 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 2-177
Cow position: chr11:25183208-25183043 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 2-180
Cow position: chr11:76371889-76372064 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 121, 37

Conread position: 3-179
Cow position: chr11:62419892-62419719 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 3-180
Cow position: chr11:7481947-7481777 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr11:81339222-81339391 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 4-180
Cow position: chr11:67296844-67297013 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 5-177
Cow position: chr11:38833310-38833474 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 5-180
Cow position: chr11:44581068-44581235 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 6-180
Cow position: chr11:40403592-40403758 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 6-180
Cow position: chr11:42371978-42371813 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 6-181
Cow position: chr11:78671691-78671860 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 7-168
Cow position: chr11:67864109-67864265 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 8-180
Cow position: chr11:5483385-5483221 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 9-161
Cow position: chr11:32284759-32284906 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 9-186
Cow position: chr11:49237793-49237965 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 118, 17

Conread position: 14-163
Cow position: chr11:49551984-49552127 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 15-180
Cow position: chr11:27659119-27658958 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 24

Conread position: 17-180
Cow position: chr11:75740636-75740480 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 21-176
Cow position: chr11:27725744-27725896 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 21, 38

Conread position: 22-180
Cow position: chr11:39805863-39805711 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 24-176
Cow position: chr11:56917843-56917992 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 106, 15

Conread position: 36-163
Cow position: chr11:46778351-46778478 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 36-176
Cow position: chr11:1493597-1493732 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 95, 24

Conread position: 52-176
Cow position: chr11:83325580-83325705 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 58-180
Cow position: chr11:87137398-87137275 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 59-177
Cow position: chr11:43512518-43512633 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 59-180
Cow position: chr11:12317892-12318013 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr11:14261115-14261236 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr11:66860363-66860483 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 62-177
Cow position: chr11:35226136-35226251 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 65-180
Cow position: chr11:9155072-9155185 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 66-176
Cow position: chr11:56480459-56480569 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 66-180
Cow position: chr11:40773910-40774024 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-131
Cow position: chr12:21428362-21428240 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-158
Cow position: chr12:21944569-21944421 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 1-162
Cow position: chr12:3363395-3363239 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr12:21483857-21483699 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 138, 38

Conread position: 1-174
Cow position: chr12:15949353-15949521 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr12:1404722-1404552 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 104, 25

Conread position: 1-176
Cow position: chr12:1886897-1887060 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 1-176
Cow position: chr12:14213717-14213887 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr12:17717751-17717581 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr12:21201198-21201029 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr12:21252127-21252297 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr12:21430413-21430243 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr12:22571297-22571132 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr12:22747664-22747499 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr12:24980135-24979968 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr12:25266883-25267053 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr12:32656005-32655839 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 1-176
Cow position: chr12:33926069-33926239 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr12:34175807-34175638 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr12:35548678-35548848 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr12:38892812-38892642 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr12:757905-757737 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr12:3179822-3179652 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr12:8675624-8675795 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr12:11100698-11100527 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr12:12755705-12755879 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr12:18585126-18584954 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr12:19872734-19872565 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr12:20460771-20460942 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr12:22203221-22203402 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 59, 38

Conread position: 1-180
Cow position: chr12:24030491-24030665 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr12:25261062-25261233 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 132, 39

Conread position: 1-180
Cow position: chr12:27853497-27853679 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 108, 38

Conread position: 1-180
Cow position: chr12:28764580-28764750 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr12:30686195-30686024 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr12:36212707-36212532 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 161, 38

Conread position: 1-180
Cow position: chr12:37561458-37561288 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 1-180
Cow position: chr12:42605726-42605896 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr12:42857076-42857247 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 2-173
Cow position: chr12:18467246-18467079 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 2-176
Cow position: chr12:21211124-21210955 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr12:251386-251559 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 3-176
Cow position: chr12:23138869-23139035 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr12:24993519-24993687 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 3-177
Cow position: chr12:1775467-1775641 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 36

Conread position: 3-180
Cow position: chr12:6479935-6480104 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 37

Conread position: 3-180
Cow position: chr12:33121844-33121676 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 4-176
Cow position: chr12:21091288-21091452 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr12:3717823-3717994 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 6-174
Cow position: chr12:28834876-28835039 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 6-180
Cow position: chr12:27930308-27930474 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 7-180
Cow position: chr12:22565514-22565346 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 9-180
Cow position: chr12:31331882-31332045 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 32-169
Cow position: chr12:24432460-24432597 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 36-176
Cow position: chr12:15775824-15775688 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 59-180
Cow position: chr12:1407233-1407112 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 60-174
Cow position: chr12:1499546-1499435 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 75-182
Cow position: chr12:23257213-23257320 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-119
Cow position: chr13:18122629-18122742 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-133
Cow position: chr13:51465957-51466081 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-134
Cow position: chr13:32080106-32079978 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr13:562145-562301 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 135
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr13:30795452-30795603 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-171
Cow position: chr13:44324715-44324879 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 118, 38

Conread position: 1-174
Cow position: chr13:680017-679854 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr13:3692705-3692873 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 145
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr13:3023038-3023208 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr13:3555653-3555483 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr13:8068911-8069081 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr13:11389449-11389279 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr13:11737998-11737828 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr13:13327185-13327015 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr13:21698520-21698351 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr13:24932551-24932720 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr13:28527665-28527833 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr13:32983156-32983326 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr13:33523714-33523884 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr13:49975917-49975750 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr13:50111711-50111541 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr13:50191383-50191554 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 106, 38

Conread position: 1-176
Cow position: chr13:60511819-60511649 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr13:60647339-60647507 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr13:11827482-11827650 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr13:15559577-15559406 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr13:22275053-22274883 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 138, 38

Conread position: 1-177
Cow position: chr13:31509150-31508982 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr13:31728656-31728825 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr13:3652020-3652192 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 29, 39

Conread position: 1-180
Cow position: chr13:4486096-4485922 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:4733775-4733602 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:4735519-4735346 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:5230703-5230874 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:5516085-5516256 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:5623508-5623682 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:11762394-11762567 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:13902103-13901935 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr13:14400862-14401030 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:15279548-15279722 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:15922216-15922387 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:18330867-18331038 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:19637388-19637219 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:21837972-21838145 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:25381646-25381474 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:30240792-30240626 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr13:30305436-30305265 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:30470133-30470295 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:30653044-30653215 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 1-180
Cow position: chr13:32734945-32735116 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:32776855-32777029 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:32923030-32923202 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr13:33334106-33334274 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:34040099-34040275 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 123, 43

Conread position: 1-180
Cow position: chr13:34050942-34050768 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 83, 38

Conread position: 1-180
Cow position: chr13:34344155-34343981 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:34509568-34509739 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr13:34906286-34906456 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:35759801-35759627 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:36347877-36348046 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 1-180
Cow position: chr13:43591517-43591349 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr13:46459666-46459841 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 38

Conread position: 1-180
Cow position: chr13:54239182-54239357 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 60

Conread position: 1-180
Cow position: chr13:61953480-61953310 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1-182
Cow position: chr13:1142232-1142408 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 2-176
Cow position: chr13:17310660-17310491 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr13:23455680-23455511 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr13:35539407-35539237 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 38

Conread position: 2-176
Cow position: chr13:49613292-49613461 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 33, 0

Conread position: 2-176
Cow position: chr13:54145049-54144883 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 2-177
Cow position: chr13:669487-669318 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 2-180
Cow position: chr13:3481618-3481789 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 2-180
Cow position: chr13:11796472-11796640 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 37

Conread position: 2-180
Cow position: chr13:16252280-16252448 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 3-175
Cow position: chr13:8649471-8649309 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 3-176
Cow position: chr13:2872821-2872991 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 3-176
Cow position: chr13:5499747-5499906 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr13:21401087-21400915 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 36

Conread position: 3-176
Cow position: chr13:21906696-21906862 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 23

Conread position: 3-177
Cow position: chr13:47368407-47368240 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 3-180
Cow position: chr13:21879564-21879742 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 36

Conread position: 3-180
Cow position: chr13:34870203-34870031 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 4-177
Cow position: chr13:4943624-4943459 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 4-180
Cow position: chr13:6665895-6666069 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 118, 40

Conread position: 4-180
Cow position: chr13:9300121-9299956 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 5-180
Cow position: chr13:32548998-32548828 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 6-174
Cow position: chr13:33169534-33169692 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 6-180
Cow position: chr13:30036041-30036211 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 109, 29

Conread position: 8-176
Cow position: chr13:19565949-19565789 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 11-180
Cow position: chr13:31609562-31609723 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 14-174
Cow position: chr13:19044335-19044486 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 113, 25

Conread position: 14-180
Cow position: chr13:26846710-26846560 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 14-180
Cow position: chr13:34031825-34031658 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 31

Conread position: 21-177
Cow position: chr13:47576316-47576169 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 22-174
Cow position: chr13:34322778-34322927 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 8, 37

Conread position: 36-177
Cow position: chr13:32321368-32321506 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 21

Conread position: 44-176
Cow position: chr13:16921661-16921533 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 59-176
Cow position: chr13:6360036-6359918 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 63-180
Cow position: chr13:54312288-54312172 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-143
Cow position: chr14:44889117-44889254 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 1-157
Cow position: chr14:2288372-2288224 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-161
Cow position: chr14:37256273-37256122 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 1-162
Cow position: chr14:31684568-31684724 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 133
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-172
Cow position: chr14:35931490-35931324 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr14:30582006-30582171 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr14:42121461-42121632 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 59

Conread position: 1-175
Cow position: chr14:48252210-48252376 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:1660568-1660402 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:7988629-7988462 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:9450418-9450585 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:13237688-13237867 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 131

Conread position: 1-176
Cow position: chr14:17489212-17489381 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:19549311-19549144 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:22104441-22104611 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:23255225-23255395 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:29773999-29774166 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr14:30713667-30713837 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:34763038-34763208 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:38434999-38434832 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:38460339-38460509 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:44260580-44260405 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 61, 38

Conread position: 1-176
Cow position: chr14:44553939-44553773 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 1-176
Cow position: chr14:45026841-45027009 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:46222197-46222027 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:46389146-46389313 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 39

Conread position: 1-176
Cow position: chr14:46406430-46406260 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 127, 13

Conread position: 1-176
Cow position: chr14:46503804-46503638 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:46638741-46638574 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr14:13781977-13781809 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr14:13861404-13861575 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr14:16997923-16998090 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr14:30665472-30665636 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 1-177
Cow position: chr14:43560346-43560179 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr14:44691295-44691125 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 1-177
Cow position: chr14:46123245-46123073 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 67, 38

Conread position: 1-180
Cow position: chr14:192167-191995 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:5531451-5531280 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:11151801-11151964 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:11835748-11835573 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 39

Conread position: 1-180
Cow position: chr14:12740928-12741102 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:13305220-13305046 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr14:13463546-13463379 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr14:16917613-16917786 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:19326144-19326317 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:22029352-22029526 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr14:28210014-28209840 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:32449076-32448902 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:32473026-32473201 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 1-180
Cow position: chr14:32584914-32585083 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:34668673-34668848 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 118, 38

Conread position: 1-180
Cow position: chr14:34904469-34904296 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr14:35383532-35383700 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:37226273-37226099 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:41411862-41411687 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 5

Conread position: 1-180
Cow position: chr14:45087320-45087147 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:45187714-45187880 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr14:48827393-48827218 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 120, 38

Conread position: 1-180
Cow position: chr14:50113481-50113311 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 1-182
Cow position: chr14:46434733-46434558 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 2-169
Cow position: chr14:9512794-9512956 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 31

Conread position: 2-175
Cow position: chr14:40719704-40719866 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 2-176
Cow position: chr14:29045567-29045730 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 2-176
Cow position: chr14:38813361-38813530 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 2-177
Cow position: chr14:20563626-20563796 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 2-180
Cow position: chr14:9849788-9849952 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr14:13580944-13580775 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr14:30594092-30594263 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 3-176
Cow position: chr14:39772440-39772272 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 120, 32

Conread position: 3-177
Cow position: chr14:26457243-26457077 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr14:43557072-43556901 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr14:44254654-44254824 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 4-180
Cow position: chr14:36908092-36908263 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 105, 40

Conread position: 5-180
Cow position: chr14:15273441-15273610 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 6-180
Cow position: chr14:46469080-46469246 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 163, 33

Conread position: 6-181
Cow position: chr14:3083841-3084011 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 34

Conread position: 7-180
Cow position: chr14:11475179-11475347 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 8-180
Cow position: chr14:37982196-37982369 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 9

Conread position: 14-150
Cow position: chr14:40511758-40511628 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 14-180
Cow position: chr14:30737454-30737296 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 15-176
Cow position: chr14:20784689-20784536 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 19-180
Cow position: chr14:38149209-38149052 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 20

Conread position: 20-180
Cow position: chr14:31150423-31150265 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 19

Conread position: 20-180
Cow position: chr14:33679177-33679022 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 21-175
Cow position: chr14:44291163-44291013 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 9, 24

Conread position: 21-180
Cow position: chr14:40344408-40344254 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 22-180
Cow position: chr14:41272098-41272251 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 23-180
Cow position: chr14:39299716-39299570 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 31-180
Cow position: chr14:13275402-13275259 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 27

Conread position: 35-180
Cow position: chr14:5515018-5514877 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 36-180
Cow position: chr14:11563641-11563501 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 36-180
Cow position: chr14:35427629-35427486 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 44-175
Cow position: chr14:16807247-16807373 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 57-176
Cow position: chr14:33490889-33490772 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 59-174
Cow position: chr14:43562867-43562751 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 59-180
Cow position: chr14:2296549-2296428 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr14:17688912-17688791 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr14:41444393-41444272 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 68-176
Cow position: chr14:40385868-40385976 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-120
Cow position: chr15:3837346-3837460 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-158
Cow position: chr15:8929621-8929773 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 129
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-158
Cow position: chr15:52977072-52976920 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-159
Cow position: chr15:4199124-4198973 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr15:42318684-42318834 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 39

Conread position: 1-168
Cow position: chr15:20354360-20354524 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 1-170
Cow position: chr15:6066396-6066556 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr15:1784450-1784283 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr15:4948621-4948453 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr15:5939552-5939713 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr15:25204890-25205058 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr15:31847679-31847512 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 1-176
Cow position: chr15:480696-480529 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr15:2645530-2645700 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr15:3721916-3722083 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 146
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr15:3891682-3891512 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 140, 38

Conread position: 1-176
Cow position: chr15:5009520-5009688 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr15:6563294-6563124 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr15:6615137-6614970 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr15:7565118-7564950 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 1-176
Cow position: chr15:7963842-7964006 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 1-176
Cow position: chr15:10825587-10825419 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr15:13389241-13389407 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 94, 38

Conread position: 1-176
Cow position: chr15:16189653-16189823 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr15:17035527-17035701 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 62

Conread position: 1-176
Cow position: chr15:18229181-18229011 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr15:18265646-18265813 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr15:20017361-20017531 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr15:21635625-21635791 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr15:25132071-25131901 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr15:27635544-27635374 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr15:28488007-28488177 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 1-176
Cow position: chr15:31586277-31586450 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr15:33123498-33123328 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr15:36330341-36330511 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr15:36941270-36941443 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 142, 38

Conread position: 1-176
Cow position: chr15:50149438-50149268 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr15:53323236-53323069 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 1-177
Cow position: chr15:4387870-4387700 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 66, 38

Conread position: 1-177
Cow position: chr15:4639050-4638882 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr15:4673361-4673190 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr15:6080821-6080653 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr15:7270457-7270291 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr15:7930688-7930516 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 1-177
Cow position: chr15:8411155-8410986 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-177
Cow position: chr15:9432046-9431880 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 1-177
Cow position: chr15:18578827-18578657 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 1-177
Cow position: chr15:28433189-28433017 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 40

Conread position: 1-177
Cow position: chr15:32491773-32491943 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr15:51219857-51219687 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-179
Cow position: chr15:27748126-27747953 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:610129-610300 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 1-180
Cow position: chr15:2806761-2806931 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 1-180
Cow position: chr15:2900135-2900309 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:3258923-3259096 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:4221017-4221189 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr15:4727321-4727150 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr15:4917315-4917141 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr15:5497172-5497004 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:5982762-5982591 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:6119529-6119354 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 173, 38

Conread position: 1-180
Cow position: chr15:6153813-6153987 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:6280744-6280573 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 39

Conread position: 1-180
Cow position: chr15:6551646-6551820 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 1-180
Cow position: chr15:6804681-6804498 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 34

Conread position: 1-180
Cow position: chr15:7236428-7236254 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:7546997-7546826 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:7840419-7840245 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:9395082-9394908 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:9911182-9911353 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr15:12418591-12418765 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:13429939-13429766 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:14580030-14580204 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:14756118-14755950 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:15344988-15345162 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:17397839-17397675 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:20412714-20412541 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr15:20457170-20456998 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 1-180
Cow position: chr15:21534013-21534180 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:21663628-21663799 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:24297310-24297136 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:25490385-25490215 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr15:32066139-32066307 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:35751179-35751348 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 39

Conread position: 1-180
Cow position: chr15:40063311-40063139 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr15:42532037-42531863 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:42939026-42938852 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:42944490-42944664 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:43293054-43293224 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr15:53340330-53340164 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-184
Cow position: chr15:6384437-6384616 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 181, 38

Conread position: 1-225
Cow position: chr15:7848466-7848247 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 142
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 2-177
Cow position: chr15:16508979-16508810 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr15:20405622-20405793 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 2-180
Cow position: chr15:29341932-29342100 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr15:29969241-29969402 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr15:37472450-37472616 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 3-175
Cow position: chr15:2633598-2633761 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 3-176
Cow position: chr15:2927366-2927201 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 3-176
Cow position: chr15:17075306-17075473 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr15:21913862-21914030 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 119, 36

Conread position: 3-176
Cow position: chr15:32713321-32713152 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr15:36356970-36357135 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 27

Conread position: 3-176
Cow position: chr15:43739144-43739312 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 4-180
Cow position: chr15:7262725-7262559 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr15:8753012-8752840 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 4-180
Cow position: chr15:19735929-19736100 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr15:31363579-31363408 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 4-180
Cow position: chr15:38982764-38982593 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 6-180
Cow position: chr15:24719340-24719172 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 153, 8

Conread position: 7-180
Cow position: chr15:2410587-2410754 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 7-180
Cow position: chr15:4924244-4924076 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 8-177
Cow position: chr15:8060098-8059934 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 9-180
Cow position: chr15:8101564-8101397 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 96, 30

Conread position: 9-181
Cow position: chr15:24042373-24042202 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 24, 17

Conread position: 11-176
Cow position: chr15:6382045-6382202 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 14-141
Cow position: chr15:5019154-5019032 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 18-176
Cow position: chr15:37631120-37630967 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 19-177
Cow position: chr15:24795985-24795832 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 20

Conread position: 20-177
Cow position: chr15:16788679-16788832 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 19

Conread position: 22-180
Cow position: chr15:13679493-13679345 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 28-180
Cow position: chr15:7329670-7329817 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 38-176
Cow position: chr15:44072550-44072414 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 44-176
Cow position: chr15:51767318-51767443 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 45-174
Cow position: chr15:48008483-48008358 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 52-176
Cow position: chr15:40103062-40102939 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 57-180
Cow position: chr15:36279897-36280020 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 59-176
Cow position: chr15:9002166-9002283 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr15:314018-314137 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 59-180
Cow position: chr15:32696216-32696096 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 60-180
Cow position: chr15:581481-581361 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 61-180
Cow position: chr15:7940490-7940371 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 62-176
Cow position: chr15:21636278-21636389 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 65-176
Cow position: chr15:51911477-51911588 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-146
Cow position: chr16:4388504-4388364 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-149
Cow position: chr16:15411280-15411420 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-151
Cow position: chr16:9416918-9417063 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 1-152
Cow position: chr16:14440421-14440281 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-152
Cow position: chr16:23097423-23097569 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 125
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr16:2481348-2481503 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 149, 38

Conread position: 1-162
Cow position: chr16:5526334-5526490 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 132
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr16:5876112-5875963 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-163
Cow position: chr16:16031680-16031522 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 20, 39

Conread position: 1-174
Cow position: chr16:3010607-3010442 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr16:26991181-26991348 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr16:37443750-37443918 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 164, 31

Conread position: 1-176
Cow position: chr16:34311-34143 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 150, 37

Conread position: 1-176
Cow position: chr16:194138-194300 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr16:818480-818312 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 1-176
Cow position: chr16:2890744-2890914 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr16:6945038-6944876 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr16:10373914-10374082 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr16:10770647-10770482 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 1-176
Cow position: chr16:11284989-11284822 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr16:19672594-19672764 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 162, 38

Conread position: 1-176
Cow position: chr16:20277621-20277451 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr16:20642277-20642107 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr16:22799902-22800072 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr16:23876756-23876926 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr16:24406684-24406514 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr16:24621930-24622097 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr16:26652387-26652217 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr16:27595286-27595120 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr16:28168550-28168720 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr16:41161696-41161866 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr16:41573176-41572996 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 1-176
Cow position: chr16:42162516-42162346 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr16:43895495-43895662 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr16:47403151-47402984 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr16:47787726-47787556 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr16:53446003-53446173 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr16:625143-624978 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr16:3331678-3331514 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 1-177
Cow position: chr16:3348576-3348405 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 129, 43

Conread position: 1-177
Cow position: chr16:12536178-12536349 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr16:19275898-19275734 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 1-177
Cow position: chr16:25463140-25463307 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 1-177
Cow position: chr16:32325623-32325451 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 80, 41

Conread position: 1-177
Cow position: chr16:41033071-41032900 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr16:51402082-51402252 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:839051-838883 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:1433959-1433785 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:1565903-1566074 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:2273830-2273657 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 1-180
Cow position: chr16:2409124-2409294 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:2725454-2725625 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:3031734-3031902 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:3144627-3144795 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:3149259-3149427 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:3770243-3770415 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 1-180
Cow position: chr16:4425861-4425689 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr16:5487538-5487363 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:7466381-7466207 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:7674691-7674865 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:14663538-14663708 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr16:15186837-15186666 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:21189002-21188828 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:23672380-23672206 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:23985078-23984904 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:25087378-25087211 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:25343744-25343570 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:25443400-25443227 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:27731614-27731785 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:28194532-28194706 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 147
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:28269298-28269463 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:29048798-29048624 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr16:31586929-31587102 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr16:34505465-34505293 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 166, 38

Conread position: 1-180
Cow position: chr16:36240924-36240753 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:39034933-39035104 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:39645418-39645247 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 38

Conread position: 1-180
Cow position: chr16:40294402-40294568 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr16:42746491-42746659 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 155, 38

Conread position: 1-180
Cow position: chr16:46224786-46224957 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 44

Conread position: 1-180
Cow position: chr16:46521282-46521455 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 0

Conread position: 1-180
Cow position: chr16:49743662-49743833 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 29, 0

Conread position: 1-180
Cow position: chr16:52525999-52525828 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr16:52589938-52590110 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 36

Conread position: 1-180
Cow position: chr16:54323552-54323726 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 2-172
Cow position: chr16:30050833-30050675 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 24

Conread position: 2-176
Cow position: chr16:18617362-18617529 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr16:28435371-28435538 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 2-176
Cow position: chr16:29207444-29207620 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 35, 62

Conread position: 2-176
Cow position: chr16:42804526-42804360 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 24

Conread position: 2-177
Cow position: chr16:19342980-19343149 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 3-175
Cow position: chr16:20203766-20203603 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 3-177
Cow position: chr16:2237004-2237171 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 3-177
Cow position: chr16:16239332-16239498 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 3-180
Cow position: chr16:15980620-15980788 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr16:25126786-25126955 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr16:47475786-47475612 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 3-180
Cow position: chr16:51086547-51086380 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 4-176
Cow position: chr16:20200897-20200730 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 4-177
Cow position: chr16:41164994-41165155 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 4-180
Cow position: chr16:25455697-25455864 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 5-176
Cow position: chr16:5663604-5663445 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 5-180
Cow position: chr16:8814340-8814510 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 5-180
Cow position: chr16:41684529-41684693 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 6-180
Cow position: chr16:21812290-21812121 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 6-180
Cow position: chr16:23365147-23365313 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 8-180
Cow position: chr16:4798957-4799122 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 12-180
Cow position: chr16:18668103-18667941 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 14-176
Cow position: chr16:20192418-20192568 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 14-177
Cow position: chr16:25955800-25955965 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 111, 28

Conread position: 14-180
Cow position: chr16:16230058-16229902 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 14-180
Cow position: chr16:29035657-29035494 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 103, 29

Conread position: 14-180
Cow position: chr16:37479096-37479257 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 16-177
Cow position: chr16:40842167-40842010 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 24

Conread position: 19-180
Cow position: chr16:1862198-1862047 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 20-180
Cow position: chr16:10439999-10439845 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 22-180
Cow position: chr16:5891765-5891610 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 35-176
Cow position: chr16:16538542-16538410 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 52-176
Cow position: chr16:55149956-55149833 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 52-180
Cow position: chr16:31424568-31424440 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 72, 61

Conread position: 53-163
Cow position: chr16:3827648-3827758 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 54-180
Cow position: chr16:39365160-39365286 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 55-176
Cow position: chr16:20635794-20635910 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 59-180
Cow position: chr16:15568970-15568852 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 59-180
Cow position: chr16:28469065-28469186 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 60-180
Cow position: chr16:4462632-4462749 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 61-177
Cow position: chr16:20408452-20408566 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 67-180
Cow position: chr16:25259512-25259402 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 1-125
Cow position: chr17:1704502-1704621 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-146
Cow position: chr17:39950731-39950872 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 38

Conread position: 1-148
Cow position: chr17:37454994-37455136 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-151
Cow position: chr17:20233083-20232936 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 120, 38

Conread position: 1-154
Cow position: chr17:7561619-7561765 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 1-157
Cow position: chr17:27792447-27792593 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr17:4210348-4210200 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-171
Cow position: chr17:16897761-16897920 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 38

Conread position: 1-174
Cow position: chr17:5307403-5307571 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr17:19979792-19979957 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chr17:14233270-14233446 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 38

Conread position: 1-176
Cow position: chr17:40638-40468 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr17:147266-147093 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 113, 38

Conread position: 1-176
Cow position: chr17:452168-452001 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr17:2170746-2170574 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 58

Conread position: 1-176
Cow position: chr17:2245711-2245880 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 146
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr17:2264521-2264355 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr17:3742496-3742326 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr17:8210987-8210820 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr17:13418736-13418566 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr17:14214701-14214871 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr17:15141004-15141167 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr17:15438131-15437961 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr17:15709657-15709827 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr17:15808307-15808136 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 152, 43

Conread position: 1-176
Cow position: chr17:17257855-17257685 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr17:21768779-21768945 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr17:23322092-23322261 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr17:24784502-24784338 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr17:29825629-29825799 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr17:34575094-34574924 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr17:41011919-41011750 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr17:43146239-43146409 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr17:253153-252987 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr17:2176317-2176144 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 157, 53

Conread position: 1-177
Cow position: chr17:8204262-8204098 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 1-177
Cow position: chr17:15327619-15327451 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 1-177
Cow position: chr17:41412184-41412015 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-179
Cow position: chr17:16903218-16903049 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr17:1570054-1570224 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr17:1655418-1655587 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr17:1705735-1705561 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr17:1785667-1785838 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr17:1882602-1882431 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 1-180
Cow position: chr17:6262196-6262024 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 82, 38

Conread position: 1-180
Cow position: chr17:11085346-11085517 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 1-180
Cow position: chr17:11380854-11381029 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 147
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 80, 38

Conread position: 1-180
Cow position: chr17:13930227-13930053 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr17:14242160-14241978 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 112, 38

Conread position: 1-180
Cow position: chr17:15720787-15720619 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 1-180
Cow position: chr17:16855762-16855939 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 127, 38

Conread position: 1-180
Cow position: chr17:22107310-22107484 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr17:25738633-25738459 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr17:28026155-28026330 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-181
Cow position: chr17:136975-136801 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-184
Cow position: chr17:13690069-13690246 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 181, 25

Conread position: 2-129
Cow position: chr17:146085-146207 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr17:4782009-4782179 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 33

Conread position: 2-180
Cow position: chr17:20085440-20085607 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 31

Conread position: 2-190
Cow position: chr17:20097978-20098157 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 38

Conread position: 3-176
Cow position: chr17:2553927-2554095 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr17:1458725-1458549 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 40

Conread position: 4-177
Cow position: chr17:24027659-24027823 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 5-177
Cow position: chr17:4084352-4084191 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 6-180
Cow position: chr17:21420279-21420113 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 9-162
Cow position: chr17:33283011-33283154 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 15-176
Cow position: chr17:19216388-19216542 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 24

Conread position: 15-176
Cow position: chr17:22253638-22253789 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 15-180
Cow position: chr17:240613-240451 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 37-180
Cow position: chr17:14897260-14897123 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 44-176
Cow position: chr17:25463283-25463155 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 49-180
Cow position: chr17:15852997-15852869 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 44

Conread position: 63-176
Cow position: chr17:14935660-14935773 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 63-177
Cow position: chr17:52580-52695 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 63-180
Cow position: chr17:2005382-2005265 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 91-180
Cow position: chr17:29303025-29302936 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr18:10221582-10221464 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-153
Cow position: chr18:33521765-33521621 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-161
Cow position: chr18:16174055-16174207 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr18:27538967-27538814 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 141, 29

Conread position: 1-171
Cow position: chr18:18216060-18215895 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr18:16558255-16558089 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr18:51273552-51273714 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:603905-604071 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:1956617-1956787 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:3755496-3755326 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 145
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:11272296-11272461 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:14128735-14128898 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:16081077-16080907 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:16464309-16464474 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:19354915-19354745 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:21530077-21529910 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:22182977-22183140 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:27835533-27835702 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:30762406-30762576 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:32165377-32165543 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:32437550-32437720 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:32770295-32770131 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr18:35295727-35295557 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:37700937-37701107 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr18:51344656-51344493 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:51460289-51460456 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr18:51662701-51662531 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:51696846-51696675 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 127, 43

Conread position: 1-176
Cow position: chr18:52630696-52630862 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr18:55417276-55417109 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr18:25353800-25353632 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr18:29239651-29239485 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 1-177
Cow position: chr18:32656242-32656071 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr18:5535546-5535372 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr18:14132947-14132773 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr18:14418528-14418351 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 99, 38

Conread position: 1-180
Cow position: chr18:16092370-16092196 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr18:17322958-17322785 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 1-180
Cow position: chr18:19457421-19457243 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 93, 38

Conread position: 1-180
Cow position: chr18:23702531-23702702 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr18:23801574-23801403 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr18:25922944-25922770 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr18:26244026-26244197 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr18:28929039-28929207 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr18:28969735-28969906 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr18:29222919-29222751 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 47

Conread position: 1-180
Cow position: chr18:29864054-29864227 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr18:33101878-33101704 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr18:36647726-36647552 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr18:36775828-36775654 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr18:37508517-37508346 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 1-180
Cow position: chr18:40483558-40483387 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr18:51484149-51483975 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 110, 47

Conread position: 1-180
Cow position: chr18:52655366-52655195 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr18:54272980-54272810 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-181
Cow position: chr18:15171428-15171258 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 1-186
Cow position: chr18:5202078-5201898 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-197
Cow position: chr18:38160307-38160497 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 2-158
Cow position: chr18:28083605-28083454 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 129
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 107, 37

Conread position: 2-174
Cow position: chr18:54026351-54026187 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr18:5077514-5077683 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 2-176
Cow position: chr18:25941454-25941285 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr18:54168331-54168499 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 3-174
Cow position: chr18:9661265-9661103 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 3-176
Cow position: chr18:33988010-33987842 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr18:37677079-37676914 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 3-176
Cow position: chr18:40158876-40158711 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr18:14814788-14814619 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 119, 30

Conread position: 3-180
Cow position: chr18:15857728-15857558 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 3-180
Cow position: chr18:27168182-27168007 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 16, 37

Conread position: 4-180
Cow position: chr18:36511169-36511001 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 7-176
Cow position: chr18:28767348-28767184 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 7-194
Cow position: chr18:54032256-54032074 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 11-180
Cow position: chr18:4948487-4948325 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 151, 28

Conread position: 14-176
Cow position: chr18:1046896-1046739 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 15-176
Cow position: chr18:47744033-47743877 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 16-176
Cow position: chr18:40080145-40080297 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 33-180
Cow position: chr18:39813109-39813251 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 60-179
Cow position: chr18:13477486-13477366 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 61-180
Cow position: chr18:37664897-37664779 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 68-180
Cow position: chr18:56035880-56035768 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-163
Cow position: chr19:35382596-35382752 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr19:40891-40735 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr19:775179-775011 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr19:7481379-7481549 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr19:15445307-15445472 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr19:16318051-16318221 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr19:20107299-20107113 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 59, 38

Conread position: 1-176
Cow position: chr19:20610890-20610720 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr19:22511218-22511385 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr19:33649628-33649798 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 1-176
Cow position: chr19:33944127-33943959 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr19:42297567-42297738 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 38

Conread position: 1-176
Cow position: chr19:43147232-43147062 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr19:3142190-3142022 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 1-177
Cow position: chr19:28404010-28404181 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr19:44758234-44758401 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr19:165565-165738 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr19:207062-206889 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr19:257871-257698 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 1-180
Cow position: chr19:1585025-1584850 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr19:1586696-1586869 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr19:3088764-3088936 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 19

Conread position: 1-180
Cow position: chr19:5732063-5731897 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 1-180
Cow position: chr19:7344591-7344418 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr19:7490656-7490485 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr19:12775681-12775507 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr19:21338285-21338459 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr19:24727122-24727292 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr19:28579142-28579306 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr19:33875973-33875800 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr19:39182981-39183155 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr19:39393069-39392896 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr19:40834706-40834877 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 1-180
Cow position: chr19:40849929-40850102 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 2-176
Cow position: chr19:5781961-5782127 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 44

Conread position: 2-176
Cow position: chr19:33905628-33905459 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 2-180
Cow position: chr19:748708-748875 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 2-180
Cow position: chr19:9705628-9705797 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 38

Conread position: 3-162
Cow position: chr19:25378493-25378338 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 36

Conread position: 4-180
Cow position: chr19:436781-436953 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 152, 35

Conread position: 4-180
Cow position: chr19:2271563-2271731 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 5-175
Cow position: chr19:28795774-28795937 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 6-185
Cow position: chr19:36999794-36999968 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 11-180
Cow position: chr19:16129907-16129749 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 14-176
Cow position: chr19:28595925-28595773 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 16-180
Cow position: chr19:37683481-37683325 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 31-176
Cow position: chr19:5898980-5899117 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 52-176
Cow position: chr19:5248275-5248399 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr19:44396337-44396458 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-126
Cow position: chr2:29106227-29106107 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-145
Cow position: chr2:81414634-81414495 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 120
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-150
Cow position: chr2:4834597-4834742 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 124
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 32, 44

Conread position: 1-160
Cow position: chr2:49473885-49473729 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 133
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 26, 39

Conread position: 1-162
Cow position: chr2:8106428-8106271 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 106, 38

Conread position: 1-162
Cow position: chr2:49302014-49302168 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr2:55482189-55482345 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 1-162
Cow position: chr2:56264792-56264637 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 139, 19

Conread position: 1-174
Cow position: chr2:14825015-14824852 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chr2:9957066-9957235 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chr2:9963066-9963235 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chr2:39423933-39423764 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chr2:52620778-52620612 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:2086157-2086327 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:2182268-2182435 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:2210176-2210340 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:2214000-2214164 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:2410805-2410981 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 104, 38

Conread position: 1-176
Cow position: chr2:2456498-2456668 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 146
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:3622527-3622358 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 1-176
Cow position: chr2:4181114-4181284 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:6004833-6005003 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 147
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr2:7369675-7369511 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 132, 39

Conread position: 1-176
Cow position: chr2:8733043-8732873 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:9909994-9909824 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:11500984-11500815 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr2:12594978-12594808 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:12753035-12752865 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:14208831-14208998 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:21982753-21982920 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:24687683-24687517 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:26903777-26903944 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:26923427-26923257 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:29967986-29967816 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:32410236-32410406 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:41047248-41047418 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:43757637-43757807 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:44093368-44093206 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:46908446-46908616 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:47183126-47183296 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:48851246-48851416 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr2:49460811-49460981 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:49462922-49462752 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr2:49629327-49629157 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:52160874-52161037 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 131, 38

Conread position: 1-176
Cow position: chr2:52498075-52498242 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:53541942-53541772 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:54739488-54739318 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:57053569-57053399 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:57337960-57337790 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:59411739-59411909 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:62730526-62730356 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:67189596-67189426 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 146
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:72689603-72689436 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr2:77858339-77858178 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 39

Conread position: 1-177
Cow position: chr2:906261-906090 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 134, 39

Conread position: 1-177
Cow position: chr2:6964666-6964499 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1-177
Cow position: chr2:9972690-9972519 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr2:10263415-10263581 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr2:10730874-10731041 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr2:29217722-29217551 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr2:31408341-31408512 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr2:72791573-72791740 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-179
Cow position: chr2:13067999-13068166 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 39

Conread position: 1-180
Cow position: chr2:169173-169346 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr2:245894-246065 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:974372-974542 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:3833511-3833680 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr2:4452371-4452197 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:4932189-4932357 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:5868306-5868477 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr2:5996839-5996666 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr2:8120704-8120530 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:10184227-10184398 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:10467599-10467429 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 1-180
Cow position: chr2:16902393-16902222 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr2:24470633-24470806 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 168, 38

Conread position: 1-180
Cow position: chr2:24927414-24927244 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:25023099-25022925 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr2:25886554-25886722 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:28612088-28612257 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr2:28647617-28647788 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:28795845-28795671 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:32064048-32064219 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:36982653-36982482 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:42668702-42668873 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:44477611-44477440 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:44933021-44933190 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr2:45212684-45212858 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:45937712-45937882 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:46183534-46183708 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 100, 38

Conread position: 1-180
Cow position: chr2:49632789-49632619 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 1-180
Cow position: chr2:50079563-50079392 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 1-180
Cow position: chr2:50981150-50981318 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:52064760-52064586 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:53004197-53004371 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:53331804-53331630 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:54695638-54695467 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr2:60673822-60673996 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:63289919-63290084 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 35

Conread position: 1-180
Cow position: chr2:66597037-66596863 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 1-180
Cow position: chr2:72932081-72932258 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 84, 34

Conread position: 1-180
Cow position: chr2:78764656-78764487 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr2:80290762-80290936 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-181
Cow position: chr2:33081751-33081923 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-181
Cow position: chr2:45678466-45678293 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 32

Conread position: 2-162
Cow position: chr2:31455441-31455283 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 2-164
Cow position: chr2:78748302-78748149 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 2-168
Cow position: chr2:25756978-25757140 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 117, 37

Conread position: 2-176
Cow position: chr2:1433847-1434021 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 40

Conread position: 2-176
Cow position: chr2:44651685-44651517 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 2-177
Cow position: chr2:2205808-2205983 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 59, 30

Conread position: 2-180
Cow position: chr2:779421-779589 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 2-180
Cow position: chr2:22079915-22079739 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 129, 33

Conread position: 2-180
Cow position: chr2:41156192-41156023 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 2-180
Cow position: chr2:42330846-42331019 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 2-181
Cow position: chr2:36059761-36059933 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 2-183
Cow position: chr2:6290916-6290741 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 3-176
Cow position: chr2:816470-816301 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 3-176
Cow position: chr2:8085904-8085736 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 143
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr2:36276113-36276281 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 3-177
Cow position: chr2:67956647-67956480 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr2:8747146-8747317 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr2:25027301-25027475 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 86, 36

Conread position: 3-180
Cow position: chr2:70709545-70709373 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 3-189
Cow position: chr2:1107157-1107336 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 4-176
Cow position: chr2:57937397-57937230 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 4-177
Cow position: chr2:12478266-12478430 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 35

Conread position: 4-180
Cow position: chr2:11731882-11731709 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 35

Conread position: 4-180
Cow position: chr2:12222282-12222450 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr2:19013358-19013188 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr2:65936225-65936396 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 6-177
Cow position: chr2:32457070-32457229 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 6-180
Cow position: chr2:1200822-1200985 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 6-180
Cow position: chr2:62728810-62728647 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 7-176
Cow position: chr2:74859978-74859815 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 7-180
Cow position: chr2:35357987-35357821 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 8-176
Cow position: chr2:5902601-5902757 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 9-179
Cow position: chr2:28652120-28652283 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 122, 30

Conread position: 14-180
Cow position: chr2:2602675-2602517 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 14-180
Cow position: chr2:11157138-11157296 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 18-176
Cow position: chr2:6640792-6640639 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 19-193
Cow position: chr2:52986426-52986596 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 44

Conread position: 20-177
Cow position: chr2:26908727-26908575 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 104, 19

Conread position: 28-176
Cow position: chr2:18063540-18063686 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 103, 20

Conread position: 35-180
Cow position: chr2:36048296-36048435 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 36-176
Cow position: chr2:363098-363234 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 36-176
Cow position: chr2:34500448-34500584 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 44-163
Cow position: chr2:4923597-4923716 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 57-176
Cow position: chr2:4385363-4385244 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 59-176
Cow position: chr2:47036480-47036597 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr2:25744408-25744287 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr2:32640893-32640771 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 61-180
Cow position: chr2:280745-280864 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-133
Cow position: chr20:16105951-16105827 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-133
Cow position: chr20:39233750-39233622 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 118, 38

Conread position: 1-146
Cow position: chr20:6136469-6136609 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-146
Cow position: chr20:16560022-16560162 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 122
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr20:28724288-28724134 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-173
Cow position: chr20:8890285-8890123 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr20:20491871-20491704 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 29, 0

Conread position: 1-176
Cow position: chr20:752667-752497 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr20:825296-825132 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr20:7513860-7513690 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 1-176
Cow position: chr20:8971371-8971529 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 1-176
Cow position: chr20:18093665-18093835 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr20:18355750-18355580 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr20:19440435-19440268 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr20:19844310-19844144 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr20:20440432-20440600 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 1-176
Cow position: chr20:24541945-24541775 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr20:28444828-28444997 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr20:29757758-29757928 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr20:30430791-30430624 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr20:30578411-30578241 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr20:33598953-33598783 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr20:35844793-35844960 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr20:17659226-17659394 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr20:30688093-30687923 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 66, 38

Conread position: 1-179
Cow position: chr20:15602242-15602415 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr20:5537448-5537278 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr20:6476050-6475882 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr20:10922399-10922573 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr20:12435877-12436048 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr20:12568791-12568965 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr20:13654763-13654930 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr20:13765417-13765243 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr20:15095383-15095552 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr20:19424566-19424403 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr20:21397046-21396877 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 1-180
Cow position: chr20:21719085-21718911 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr20:23801411-23801237 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr20:23805358-23805531 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 30, 0

Conread position: 1-180
Cow position: chr20:25846101-25846268 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr20:27876002-27875830 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr20:28163564-28163393 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr20:35144360-35144534 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr20:35160060-35160232 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 2-176
Cow position: chr20:5076524-5076357 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 2-176
Cow position: chr20:34459785-34459954 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 143
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 2-177
Cow position: chr20:12047033-12046865 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 2-180
Cow position: chr20:14721863-14722034 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 3-161
Cow position: chr20:32351070-32350917 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 3-175
Cow position: chr20:13500818-13500655 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 3-177
Cow position: chr20:39881859-39881690 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 35

Conread position: 4-175
Cow position: chr20:35019438-35019276 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 4-180
Cow position: chr20:7598335-7598506 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 4-180
Cow position: chr20:10867268-10867439 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 5-176
Cow position: chr20:28561397-28561562 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 5-180
Cow position: chr20:23467148-23467318 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 18-176
Cow position: chr20:13723470-13723617 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 20-177
Cow position: chr20:19342315-19342163 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 36-180
Cow position: chr20:21917132-21916992 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 56-180
Cow position: chr20:8754085-8753961 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 57-254
Cow position: chr20:8200586-8200778 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 124, 0

Conread position: 59-176
Cow position: chr20:30385757-30385875 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 1-127
Cow position: chr21:19352231-19352352 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-145
Cow position: chr21:10852897-10852761 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-160
Cow position: chr21:17143308-17143154 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-161
Cow position: chr21:7154965-7154811 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 131
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 1-161
Cow position: chr21:33317872-33318026 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr21:4481928-4481772 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 135
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-168
Cow position: chr21:49297457-49297295 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 119, 43

Conread position: 1-174
Cow position: chr21:5631343-5631509 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 1-174
Cow position: chr21:6966835-6966996 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chr21:36375620-36375451 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr21:2513483-2513313 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr21:3922853-3922683 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr21:4036883-4036715 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 1-176
Cow position: chr21:4091965-4091799 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr21:7063038-7063208 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr21:11291320-11291151 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr21:26634526-26634696 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr21:27068329-27068499 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr21:27620866-27621035 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 145
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr21:32397419-32397589 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr21:34902750-34902913 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr21:37373858-37373688 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr21:39225424-39225594 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr21:39427708-39427538 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr21:41797091-41797261 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr21:41854-41681 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 52, 38

Conread position: 1-177
Cow position: chr21:995797-995965 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 39

Conread position: 1-177
Cow position: chr21:44763330-44763495 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-179
Cow position: chr21:35143275-35143445 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr21:2538518-2538691 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr21:2879196-2879366 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr21:3781418-3781235 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 51, 38

Conread position: 1-180
Cow position: chr21:3805559-3805385 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr21:4078679-4078512 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr21:5019777-5019604 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr21:9894781-9894606 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 136, 46

Conread position: 1-180
Cow position: chr21:10569325-10569155 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr21:13112761-13112928 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr21:21026113-21025934 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 26, 39

Conread position: 1-180
Cow position: chr21:24948738-24948571 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 16, 39

Conread position: 1-180
Cow position: chr21:27148924-27149098 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr21:27286076-27285907 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr21:27610110-27610284 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr21:30596457-30596631 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr21:31513687-31513859 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr21:34072944-34073130 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 1-180
Cow position: chr21:34255961-34256132 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr21:34656593-34656417 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 86, 38

Conread position: 1-180
Cow position: chr21:37123724-37123898 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr21:47943583-47943413 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 1-180
Cow position: chr21:48529790-48529960 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-182
Cow position: chr21:2665507-2665683 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 2-161
Cow position: chr21:21918114-21917960 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 75, 36

Conread position: 2-176
Cow position: chr21:28987769-28987605 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 2-176
Cow position: chr21:47976467-47976298 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr21:79372-79548 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 2-180
Cow position: chr21:5011106-5011278 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 3-174
Cow position: chr21:36978274-36978439 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr21:22462824-22462657 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr21:39079839-39080015 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 30

Conread position: 3-177
Cow position: chr21:37039987-37040154 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr21:2418835-2418664 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr21:22943246-22943074 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 130, 36

Conread position: 3-180
Cow position: chr21:46758541-46758378 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 4-176
Cow position: chr21:29949336-29949501 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 4-176
Cow position: chr21:47647964-47647798 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr21:28853215-28853388 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 107, 54

Conread position: 6-156
Cow position: chr21:5594356-5594211 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 132, 33

Conread position: 6-176
Cow position: chr21:7163354-7163519 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 6-180
Cow position: chr21:46969054-46969222 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 35

Conread position: 7-173
Cow position: chr21:49091812-49091974 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 32

Conread position: 9-177
Cow position: chr21:28879091-28879251 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 10-180
Cow position: chr21:1195165-1195003 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 14-177
Cow position: chr21:28614935-28614779 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 16-180
Cow position: chr21:1285614-1285771 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 16-189
Cow position: chr21:30352561-30352395 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 16

Conread position: 17-171
Cow position: chr21:31251624-31251476 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 23-176
Cow position: chr21:650288-650435 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 32-174
Cow position: chr21:33662888-33662753 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 35-180
Cow position: chr21:4587402-4587537 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 36-176
Cow position: chr21:4899577-4899714 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 36, 22

Conread position: 36-176
Cow position: chr21:7038947-7038811 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 36-180
Cow position: chr21:26401155-26401292 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 36-180
Cow position: chr21:28258013-28257876 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 59-176
Cow position: chr21:37150784-37150667 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 61-177
Cow position: chr21:48487341-48487226 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 61-180
Cow position: chr21:40269095-40269211 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 63-176
Cow position: chr21:11508185-11508072 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 92

Conread position: 63-176
Cow position: chr21:19352500-19352387 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 63-180
Cow position: chr21:44254197-44254080 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 65-180
Cow position: chr21:35390556-35390671 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-137
Cow position: chr22:30676268-30676396 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-151
Cow position: chr22:9731643-9731788 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr22:25969180-25969332 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 110, 43

Conread position: 1-162
Cow position: chr22:44479216-44479058 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 140, 39

Conread position: 1-165
Cow position: chr22:45014584-45014738 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 1-174
Cow position: chr22:6500468-6500636 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 38

Conread position: 1-174
Cow position: chr22:44100883-44101044 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 1-175
Cow position: chr22:696386-696217 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:539590-539423 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr22:980747-980579 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 123, 36

Conread position: 1-176
Cow position: chr22:5888720-5888892 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 116, 43

Conread position: 1-176
Cow position: chr22:8132326-8132493 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:10907742-10907909 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 104, 43

Conread position: 1-176
Cow position: chr22:11802590-11802760 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:15277837-15277667 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:18029733-18029564 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:21193741-21193911 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 119, 43

Conread position: 1-176
Cow position: chr22:24818292-24818462 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 58

Conread position: 1-176
Cow position: chr22:27307508-27307676 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 168, 38

Conread position: 1-176
Cow position: chr22:27512955-27512788 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 38

Conread position: 1-176
Cow position: chr22:28713135-28712968 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:28998073-28998243 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr22:29854313-29854148 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:35669206-35669376 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:43235302-43235136 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr22:44367019-44367189 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:44398894-44398724 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1-177
Cow position: chr22:1482872-1482704 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr22:1518570-1518739 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 1-177
Cow position: chr22:3304195-3304362 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 149, 38

Conread position: 1-177
Cow position: chr22:15954572-15954743 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr22:21591883-21591716 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr22:26105692-26105860 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr22:28555709-28555880 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr22:30068009-30068181 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 32, 57

Conread position: 1-177
Cow position: chr22:37269555-37269387 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr22:39039516-39039681 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 123, 37

Conread position: 1-177
Cow position: chr22:39467054-39467221 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 1-177
Cow position: chr22:41847092-41847259 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:50498-50323 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:324698-324876 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 122, 38

Conread position: 1-180
Cow position: chr22:558245-558416 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:2562303-2562477 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr22:3806109-3805934 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 161, 38

Conread position: 1-180
Cow position: chr22:5014564-5014388 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 161, 38

Conread position: 1-180
Cow position: chr22:5931628-5931790 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 1-180
Cow position: chr22:6334269-6334101 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:7154750-7154921 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:8118783-8118955 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:8735259-8735431 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:10933767-10933936 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:11609102-11608928 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:13662915-13662743 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:15309499-15309667 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:15853895-15853724 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:17326023-17326196 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr22:18813563-18813738 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 126, 38

Conread position: 1-180
Cow position: chr22:20238376-20238547 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:22934022-22934195 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:22956853-22957024 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:28784577-28784403 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:31315000-31314826 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 162, 38

Conread position: 1-180
Cow position: chr22:31332415-31332596 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 126, 38

Conread position: 1-180
Cow position: chr22:34170800-34170626 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:34604678-34604507 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:35904707-35904879 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 53

Conread position: 1-180
Cow position: chr22:36186088-36185914 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr22:36356528-36356358 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr22:36859090-36859261 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:37537015-37537188 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 114, 49

Conread position: 1-180
Cow position: chr22:40588864-40588696 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:42993635-42993461 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:43046894-43047068 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 35

Conread position: 1-180
Cow position: chr22:44516704-44516878 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:44936401-44936227 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 126, 38

Conread position: 1-180
Cow position: chr22:48272554-48272741 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 38

Conread position: 1-181
Cow position: chr22:19141230-19141402 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 2-168
Cow position: chr22:41473228-41473390 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 37

Conread position: 2-180
Cow position: chr22:41242889-41242718 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 3-174
Cow position: chr22:19019240-19019405 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 3-175
Cow position: chr22:17994854-17995021 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr22:10549100-10548935 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr22:10578030-10578198 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr22:36544495-36544663 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr22:36585385-36585553 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 5-180
Cow position: chr22:13774959-13774798 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 6-175
Cow position: chr22:3275895-3276059 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 6-180
Cow position: chr22:7278996-7278832 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 8-176
Cow position: chr22:45280393-45280233 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 8-180
Cow position: chr22:12729239-12729401 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 14-180
Cow position: chr22:11806307-11806463 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 14-180
Cow position: chr22:32205511-32205353 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 21-176
Cow position: chr22:3515888-3516040 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 18

Conread position: 35-180
Cow position: chr22:36277996-36277855 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 52-180
Cow position: chr22:18604384-18604512 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 67, 119

Conread position: 59-173
Cow position: chr22:36271544-36271430 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr22:44460073-44459953 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 20

Conread position: 62-176
Cow position: chr22:40384241-40384128 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 65-176
Cow position: chr22:18614686-18614575 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 66-176
Cow position: chr22:2391135-2391245 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-126
Cow position: chr23:19316937-19316817 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-149
Cow position: chr23:22149638-22149781 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 123
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-150
Cow position: chr23:4080594-4080450 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 125
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-173
Cow position: chr23:8289874-8289709 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 79, 38

Conread position: 1-176
Cow position: chr23:609184-609002 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 87, 38

Conread position: 1-176
Cow position: chr23:1800092-1799924 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr23:2321490-2321660 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr23:4266390-4266559 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 31, 0

Conread position: 1-176
Cow position: chr23:7313640-7313810 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr23:8705317-8705145 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 124, 38

Conread position: 1-176
Cow position: chr23:14264800-14264632 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr23:15568471-15568641 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr23:21773460-21773630 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr23:25350809-25350639 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr23:28221159-28220992 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr23:36097272-36097102 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr23:37652366-37652196 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr23:41142794-41142628 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr23:1021471-1021637 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 119, 25

Conread position: 1-177
Cow position: chr23:1958615-1958444 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 1-177
Cow position: chr23:16612345-16612511 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 1-177
Cow position: chr23:20153767-20153935 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-178
Cow position: chr23:2411184-2411349 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-179
Cow position: chr23:4515992-4515820 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 145
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr23:1050072-1050247 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 122, 38

Conread position: 1-180
Cow position: chr23:1339321-1339496 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 127, 38

Conread position: 1-180
Cow position: chr23:2024632-2024802 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 1-180
Cow position: chr23:2438854-2439030 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 39, 50

Conread position: 1-180
Cow position: chr23:2792312-2792480 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr23:4308724-4308899 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 81, 38

Conread position: 1-180
Cow position: chr23:4436110-4435939 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr23:4891145-4890972 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr23:5872111-5872279 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr23:11713406-11713580 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr23:11781246-11781075 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr23:14960498-14960669 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr23:14971495-14971666 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr23:15179520-15179349 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr23:15528039-15527868 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr23:17845338-17845164 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 132, 34

Conread position: 1-180
Cow position: chr23:19492010-19491836 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr23:22169340-22169164 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 79, 38

Conread position: 1-180
Cow position: chr23:29442645-29442812 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr23:36028928-36029102 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr23:37200065-37200236 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-182
Cow position: chr23:1249214-1249038 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-184
Cow position: chr23:7492921-7493101 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 39

Conread position: 2-176
Cow position: chr23:943429-943260 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr23:7043466-7043633 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 2-177
Cow position: chr23:13513520-13513358 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 2-177
Cow position: chr23:19441415-19441581 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 127, 37

Conread position: 2-180
Cow position: chr23:528527-528354 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 145
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr23:3708855-3708686 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 4-172
Cow position: chr23:1011382-1011546 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 35

Conread position: 4-180
Cow position: chr23:2760354-2760186 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr23:22144851-22145022 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 40, 0

Conread position: 6-157
Cow position: chr23:30635401-30635544 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 7-180
Cow position: chr23:15946686-15946518 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 8-180
Cow position: chr23:17877467-17877633 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 9-180
Cow position: chr23:28305377-28305214 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 20-176
Cow position: chr23:32350327-32350475 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 29-180
Cow position: chr23:5625144-5625287 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 29-180
Cow position: chr23:31165253-31165107 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 59-176
Cow position: chr23:1204943-1204825 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 59-177
Cow position: chr23:1326980-1327099 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 59

Conread position: 61-180
Cow position: chr23:4638211-4638330 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 62-176
Cow position: chr23:6222032-6221924 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 42, 0

Conread position: 1-129
Cow position: chr24:6963392-6963269 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-173
Cow position: chr24:12148557-12148720 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr24:208458-208628 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr24:3850111-3849941 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr24:6338911-6338746 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 16

Conread position: 1-176
Cow position: chr24:6440296-6440126 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 149
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr24:6657713-6657879 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr24:7064107-7063940 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 25, 39

Conread position: 1-176
Cow position: chr24:11150581-11150748 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr24:12698474-12698644 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr24:13190715-13190545 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr24:13234783-13234613 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr24:14195319-14195485 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr24:14350542-14350373 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr24:16081944-16082114 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 104, 38

Conread position: 1-176
Cow position: chr24:17323236-17323066 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr24:18267943-18268113 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr24:19689037-19689204 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr24:20366909-20366739 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 145
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr24:21248404-21248574 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr24:40551167-40551000 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr24:12088744-12088576 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 1-177
Cow position: chr24:14759424-14759253 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr24:146054-146224 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr24:6021535-6021706 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 39

Conread position: 1-180
Cow position: chr24:6412023-6411849 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr24:6667220-6667401 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 16

Conread position: 1-180
Cow position: chr24:11691456-11691627 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr24:12203822-12203992 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr24:12333178-12333352 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr24:16559761-16559934 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr24:20284800-20284974 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr24:22973612-22973441 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr24:23093500-23093674 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr24:23096238-23096412 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr24:29154903-29154740 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr24:29189830-29189656 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr24:32362577-32362746 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 47, 38

Conread position: 1-180
Cow position: chr24:36724610-36724434 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 125, 38

Conread position: 1-180
Cow position: chr24:37198479-37198656 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 63, 25

Conread position: 1-180
Cow position: chr24:38004397-38004572 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 40

Conread position: 1-180
Cow position: chr24:38584601-38584773 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr24:39680067-39679904 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr24:41005027-41004860 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-183
Cow position: chr24:12239414-12239239 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 26, 39

Conread position: 1-183
Cow position: chr24:14377113-14377289 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 2-163
Cow position: chr24:16907885-16907729 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 2-176
Cow position: chr24:1454316-1454155 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr24:6326826-6326992 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr24:19184705-19184540 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 27

Conread position: 2-176
Cow position: chr24:19704244-19704075 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 2-180
Cow position: chr24:36037672-36037842 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr24:44963946-44964116 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 39

Conread position: 3-176
Cow position: chr24:6069317-6069485 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 3-177
Cow position: chr24:34601886-34601707 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 37

Conread position: 4-176
Cow position: chr24:38640678-38640517 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 4-180
Cow position: chr24:19835948-19835777 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr24:19884834-19884663 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 17-177
Cow position: chr24:19468062-19468214 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 21-180
Cow position: chr24:4413034-4413180 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 36-162
Cow position: chr24:29086014-29085894 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 19

Conread position: 59-176
Cow position: chr24:17454640-17454757 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 59-177
Cow position: chr24:36132652-36132534 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr24:6078931-6078809 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 61-180
Cow position: chr24:8606835-8606716 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-150
Cow position: chr25:32578418-32578562 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 126
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-151
Cow position: chr25:17586777-17586917 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-163
Cow position: chr25:12835326-12835482 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 1-176
Cow position: chr25:13352210-13352040 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr25:14537421-14537591 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr25:18191147-18191314 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr25:19338074-19338244 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr25:19923057-19922889 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 1-176
Cow position: chr25:20773091-20773261 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 1-176
Cow position: chr25:23360428-23360258 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 122, 42

Conread position: 1-176
Cow position: chr25:27020090-27020260 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr25:29359270-29359103 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr25:29803538-29803705 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr25:34510506-34510672 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr25:34674155-34673988 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr25:35552931-35552761 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr25:11658645-11658474 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 137, 38

Conread position: 1-180
Cow position: chr25:10635026-10635200 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 1-180
Cow position: chr25:12700212-12700045 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr25:12939933-12940104 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr25:13785093-13784920 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr25:17555228-17555395 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr25:20632133-20631962 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr25:24656192-24656366 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr25:26900777-26900606 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr25:32448393-32448220 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr25:33837663-33837489 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr25:34344461-34344635 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr25:35626968-35627135 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 1-180
Cow position: chr25:41106685-41106512 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-182
Cow position: chr25:18250406-18250591 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 101

Conread position: 2-182
Cow position: chr25:16448191-16448359 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 31, 0

Conread position: 3-176
Cow position: chr25:13771030-13771200 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 37

Conread position: 3-176
Cow position: chr25:35562269-35562435 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 3-177
Cow position: chr25:18489263-18489091 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 123, 36

Conread position: 3-180
Cow position: chr25:10135944-10135776 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 37

Conread position: 3-180
Cow position: chr25:11664911-11664739 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 12, 37

Conread position: 3-181
Cow position: chr25:11042859-11042689 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 4-180
Cow position: chr25:26281260-26281092 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 5-176
Cow position: chr25:16923894-16924057 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 114, 25

Conread position: 5-180
Cow position: chr25:18887231-18887405 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 38

Conread position: 5-180
Cow position: chr25:26354841-26354671 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 6-180
Cow position: chr25:13959312-13959147 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 6-180
Cow position: chr25:34505578-34505746 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 9-177
Cow position: chr25:27522127-27522286 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 11-176
Cow position: chr25:34667493-34667652 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 14-180
Cow position: chr25:25509199-25509040 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 21-176
Cow position: chr25:20099861-20099711 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 18

Conread position: 31-180
Cow position: chr25:28862086-28861945 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 36-163
Cow position: chr25:21146488-21146365 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 16

Conread position: 59-176
Cow position: chr25:15617218-15617101 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr25:21948704-21948820 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 61-176
Cow position: chr25:14559048-14559163 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 61-177
Cow position: chr25:14962718-14962834 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 68-180
Cow position: chr25:17656837-17656725 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-119
Cow position: chr26:4440917-4440804 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-131
Cow position: chr26:7736143-7736018 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr26:2975829-2975673 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 136
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr26:13022839-13023004 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chr26:8087577-8087408 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr26:367128-366958 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr26:898900-898730 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr26:1349131-1349301 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr26:2349675-2349845 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr26:2417900-2418070 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr26:3028127-3028301 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr26:3703533-3703364 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr26:8872341-8872170 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 104, 43

Conread position: 1-176
Cow position: chr26:8884348-8884178 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr26:9114409-9114240 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr26:12667963-12667793 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr26:23888908-23888741 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr26:28707564-28707733 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr26:30753892-30754062 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr26:30785270-30785099 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 1-176
Cow position: chr26:34014191-34014025 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr26:35122747-35122917 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr26:6497110-6497275 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr26:30586850-30587021 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr26:1884337-1884504 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 34

Conread position: 1-180
Cow position: chr26:5677654-5677483 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr26:6425494-6425320 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr26:6792705-6792537 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr26:8654816-8654981 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr26:14896466-14896292 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr26:17326661-17326491 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr26:17394391-17394560 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 1-180
Cow position: chr26:17430007-17430181 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr26:18856617-18856447 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr26:19348995-19349169 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr26:21824153-21824326 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr26:31793004-31792832 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr26:32933022-32933192 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 1-181
Cow position: chr26:615757-615931 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 87, 25

Conread position: 2-176
Cow position: chr26:35561702-35561533 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 143
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 4-180
Cow position: chr26:6845020-6845189 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 14-176
Cow position: chr26:12586048-12586202 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 17-174
Cow position: chr26:35335717-35335866 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 17-180
Cow position: chr26:4749952-4750109 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 43-176
Cow position: chr26:3225604-3225738 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 59-180
Cow position: chr26:33877922-33877804 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 1-111
Cow position: chr27:1520131-1520026 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-129
Cow position: chr27:18696791-18696668 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-133
Cow position: chr27:13352747-13352620 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-138
Cow position: chr27:1676083-1676215 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-148
Cow position: chr27:25358223-25358364 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 1-173
Cow position: chr27:4981830-4981663 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr27:166462-166630 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 11, 40

Conread position: 1-176
Cow position: chr27:13900347-13900183 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr27:22742932-22743099 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr27:22797996-22798166 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr27:26599392-26599222 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 146
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 34, 0

Conread position: 1-177
Cow position: chr27:3991466-3991288 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 98, 38

Conread position: 1-177
Cow position: chr27:9990761-9990925 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr27:15273625-15273790 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 104, 36

Conread position: 1-177
Cow position: chr27:26327512-26327345 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr27:3233071-3233242 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr27:3995439-3995612 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr27:5913389-5913215 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr27:9332198-9332023 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 118, 38

Conread position: 1-180
Cow position: chr27:10378383-10378213 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr27:11433581-11433410 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 100, 38

Conread position: 1-180
Cow position: chr27:12749483-12749312 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr27:15034642-15034817 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 110, 38

Conread position: 1-180
Cow position: chr27:15332292-15332126 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr27:15634881-15635052 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr27:19524262-19524436 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr27:20809865-20809691 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr27:24296791-24296965 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr27:26552971-26553157 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 61, 38

Conread position: 1-180
Cow position: chr27:27288951-27288777 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr27:28294409-28294580 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-181
Cow position: chr27:30536443-30536272 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 2-180
Cow position: chr27:797158-797328 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr27:1535639-1535470 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 38

Conread position: 3-180
Cow position: chr27:30034616-30034444 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 4-155
Cow position: chr27:27665458-27665318 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr27:8200254-8200088 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 6-180
Cow position: chr27:25801729-25801897 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 9-174
Cow position: chr27:15374278-15374121 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 30

Conread position: 14-176
Cow position: chr27:5985302-5985145 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 133
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 14-176
Cow position: chr27:16031954-16032107 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 14-180
Cow position: chr27:30571264-30571103 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 21-180
Cow position: chr27:23318485-23318637 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 18

Conread position: 30-175
Cow position: chr27:28923409-28923270 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 52-174
Cow position: chr27:25786401-25786522 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 59-176
Cow position: chr27:7926158-7926275 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 59-177
Cow position: chr27:12263024-12263142 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 63-180
Cow position: chr27:23293955-23293841 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 63-180
Cow position: chr27:25884507-25884626 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 66-176
Cow position: chr27:66413-66523 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-148
Cow position: chr28:7738691-7738550 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-158
Cow position: chr28:21894448-21894296 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr28:5749207-5749358 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:2644215-2644045 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:5338200-5338367 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:5636326-5636168 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:7335489-7335319 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr28:8785936-8785764 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 100, 38

Conread position: 1-176
Cow position: chr28:9181371-9181202 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 1-176
Cow position: chr28:10599177-10599008 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 1-176
Cow position: chr28:15588613-15588443 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 1-176
Cow position: chr28:16596825-16596660 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:22040897-22041063 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:23674178-23674008 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 118, 42

Conread position: 1-176
Cow position: chr28:24591370-24591200 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:24885357-24885187 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:25849134-25849304 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:28470519-28470349 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:28928329-28928162 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:32588532-32588702 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:34582420-34582250 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr28:785166-784995 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr28:3013470-3013638 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr28:8718475-8718637 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr28:21379033-21378864 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 122, 38

Conread position: 1-177
Cow position: chr28:21568405-21568233 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 122, 38

Conread position: 1-177
Cow position: chr28:24670097-24669927 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1-177
Cow position: chr28:25026072-25025904 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 1-177
Cow position: chr28:34084022-34084187 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:1165387-1165561 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:1215334-1215505 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:1507372-1507194 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr28:1812442-1812607 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr28:3189744-3189918 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:5112222-5112393 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:5210618-5210447 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:5939985-5939815 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 1-180
Cow position: chr28:6536298-6536470 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 1-180
Cow position: chr28:6958729-6958556 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 132, 43

Conread position: 1-180
Cow position: chr28:7004504-7004332 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:7743638-7743467 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:8381545-8381371 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:10302338-10302168 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:10579360-10579534 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:10616546-10616717 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:11788096-11788266 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:12407717-12407887 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:13462460-13462294 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:15033582-15033756 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:15685906-15685735 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:15918025-15918198 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:17390911-17390737 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:17664826-17664992 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:18517648-18517820 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:22230832-22231002 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:26423765-26423936 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:29037148-29037322 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:30097374-30097200 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:30534565-30534739 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:32789886-32790057 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 175, 38

Conread position: 1-180
Cow position: chr28:33254819-33254645 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:33639066-33638892 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr28:34596743-34596569 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-196
Cow position: chr28:483211-483401 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 2-168
Cow position: chr28:25167653-25167816 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 2-176
Cow position: chr28:7828992-7828828 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 2-180
Cow position: chr28:10643980-10644151 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 2-180
Cow position: chr28:30960114-30959940 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 128, 37

Conread position: 2-190
Cow position: chr28:34409174-34409357 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 3-174
Cow position: chr28:11954588-11954422 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr28:31849423-31849591 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 3-180
Cow position: chr28:1955866-1955694 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 3-211
Cow position: chr28:6777510-6777712 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 4-159
Cow position: chr28:10472149-10471999 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 4-177
Cow position: chr28:12152853-12152685 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 107, 35

Conread position: 9-176
Cow position: chr28:957380-957218 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 74, 21

Conread position: 11-172
Cow position: chr28:23024675-23024520 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 11-174
Cow position: chr28:25675512-25675670 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 12-180
Cow position: chr28:6061280-6061118 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 17-177
Cow position: chr28:10458742-10458895 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 18-180
Cow position: chr28:29760142-29760300 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 108, 21

Conread position: 20-180
Cow position: chr28:24488631-24488476 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 20

Conread position: 36-175
Cow position: chr28:5815840-5815708 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 44-176
Cow position: chr28:30806228-30806100 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 52-176
Cow position: chr28:10161157-10161034 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 59-180
Cow position: chr28:6231377-6231495 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 61-180
Cow position: chr28:21361943-21361829 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 71-176
Cow position: chr28:34730366-34730261 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-133
Cow position: chr29:31764511-31764382 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 39

Conread position: 1-151
Cow position: chr29:9080363-9080505 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-153
Cow position: chr29:32542617-32542473 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-159
Cow position: chr29:40619350-40619502 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-160
Cow position: chr29:5390308-5390154 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 131
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-161
Cow position: chr29:2692917-2692765 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 38

Conread position: 1-161
Cow position: chr29:32514795-32514640 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 131
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-168
Cow position: chr29:17407606-17407444 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chr29:13584685-13584520 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr29:608161-608330 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:666940-667110 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:5960340-5960173 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr29:7428644-7428815 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 127, 38

Conread position: 1-176
Cow position: chr29:7846862-7846692 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:13850408-13850573 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 1-176
Cow position: chr29:13899133-13898963 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:13922974-13922804 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:15260522-15260692 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:15624231-15624405 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:15967086-15967256 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:16036946-16037116 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:16689300-16689132 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 1-176
Cow position: chr29:19525822-19525988 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:19890044-19889877 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:21430386-21430555 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:27977353-27977531 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 127, 38

Conread position: 1-176
Cow position: chr29:28657902-28658072 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:31095120-31095289 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:31183875-31183705 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr29:35299387-35299223 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:39424671-39424841 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:40293803-40293633 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:40470880-40470713 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:43255939-43256104 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 1-176
Cow position: chr29:45625816-45625646 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-177
Cow position: chr29:2102313-2102142 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr29:6219328-6219486 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr29:6873405-6873573 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr29:42806193-42806024 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr29:45206979-45206812 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:408791-408962 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:529931-530103 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:648290-648116 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 16

Conread position: 1-180
Cow position: chr29:2415609-2415791 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 38

Conread position: 1-180
Cow position: chr29:2745986-2746157 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr29:5980252-5980427 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:6263533-6263704 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:6933959-6933790 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr29:8624725-8624896 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:9852607-9852780 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 23, 39

Conread position: 1-180
Cow position: chr29:10644944-10645115 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:10821449-10821623 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:10845423-10845252 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:13019160-13018989 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr29:14082259-14082428 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 161, 38

Conread position: 1-180
Cow position: chr29:14209081-14209252 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:14500334-14500160 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:15995910-15996085 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 1-180
Cow position: chr29:16171641-16171813 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 1-180
Cow position: chr29:16346673-16346500 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:19620799-19620973 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:19656371-19656197 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:20253634-20253468 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:23979178-23979002 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 49, 38

Conread position: 1-180
Cow position: chr29:25930049-25930223 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:26162369-26162542 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 1-180
Cow position: chr29:34739369-34739540 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:35274552-35274726 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:39077247-39077418 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:45461700-45461527 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 1-181
Cow position: chr29:5785280-5785105 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 149
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 1-242
Cow position: chr29:15797297-15797528 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 2-162
Cow position: chr29:32807043-32807192 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr29:42256508-42256677 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 37, 0

Conread position: 2-177
Cow position: chr29:131988-131822 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr29:2838870-2839043 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr29:9640309-9640481 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 102, 15

Conread position: 3-174
Cow position: chr29:21226446-21226282 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr29:14743581-14743749 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr29:32557280-32557448 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 3-177
Cow position: chr29:32288849-32288684 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 3-180
Cow position: chr29:4518369-4518198 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 120, 36

Conread position: 4-180
Cow position: chr29:45995-46162 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr29:2464406-2464577 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 40, 0

Conread position: 4-180
Cow position: chr29:4199862-4199700 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr29:43325979-43325808 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 6-174
Cow position: chr29:5340803-5340962 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 6-176
Cow position: chr29:16013820-16013986 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 127, 33

Conread position: 11-182
Cow position: chr29:32642704-32642535 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 23, 50

Conread position: 14-176
Cow position: chr29:10021871-10022028 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 133
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 14-177
Cow position: chr29:13057204-13057043 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 110, 25

Conread position: 17-177
Cow position: chr29:107512-107359 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 22

Conread position: 59-180
Cow position: chr29:9330391-9330270 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr29:40500598-40500717 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 61-175
Cow position: chr29:253322-253208 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 63-177
Cow position: chr29:25991634-25991748 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 63-180
Cow position: chr29:5237428-5237311 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 75-180
Cow position: chr29:35003017-35003122 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr3:32491699-32491581 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-125
Cow position: chr3:39080909-39080790 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-134
Cow position: chr3:34458485-34458614 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 127, 38

Conread position: 1-142
Cow position: chr3:6713389-6713256 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-158
Cow position: chr3:53517977-53517829 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 1-162
Cow position: chr3:4030115-4029958 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 1-168
Cow position: chr3:77366687-77366856 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 116

Conread position: 1-174
Cow position: chr3:32620660-32620828 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr3:37627348-37627180 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 36

Conread position: 1-174
Cow position: chr3:48845384-48845216 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 1-174
Cow position: chr3:49563391-49563223 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr3:70889660-70889494 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chr3:2366760-2366929 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chr3:33325502-33325333 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 1-176
Cow position: chr3:1031353-1031186 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:2871178-2871008 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:6324039-6323869 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:7156329-7156499 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:7246726-7246893 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr3:13036071-13035901 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:13724334-13724503 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:15415851-15415681 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:16225265-16225102 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 1-176
Cow position: chr3:18113305-18113475 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:18861824-18861654 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:19798771-19798941 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:22338302-22338133 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 29, 0

Conread position: 1-176
Cow position: chr3:26743490-26743660 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:27920831-27920661 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:29328901-29329071 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:30989863-30990033 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:31021064-31020894 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:34504965-34505135 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:37971433-37971266 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:38254134-38253957 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 13

Conread position: 1-176
Cow position: chr3:40337758-40337928 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:41208214-41208384 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:48602633-48602466 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 162, 38

Conread position: 1-176
Cow position: chr3:49003552-49003382 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 146
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:49135179-49135345 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:49908631-49908801 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:50203928-50203752 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 134, 38

Conread position: 1-176
Cow position: chr3:53881099-53881266 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:57996499-57996329 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 145
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:64653048-64652878 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:68697586-68697756 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:68718325-68718495 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:68871368-68871538 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:68890190-68890357 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:72670172-72670338 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:74059858-74059688 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:74850751-74850920 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr3:83766634-83766464 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr3:7477539-7477707 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr3:27865557-27865388 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 152, 38

Conread position: 1-177
Cow position: chr3:34028543-34028712 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 1-177
Cow position: chr3:38868962-38868795 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr3:51937689-51937856 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 1-177
Cow position: chr3:54655152-54654981 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr3:56147688-56147522 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1-177
Cow position: chr3:63689863-63690043 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 126, 38

Conread position: 1-177
Cow position: chr3:64813066-64813233 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 1-177
Cow position: chr3:72632449-72632283 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr3:82707141-82707317 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 80, 38

Conread position: 1-177
Cow position: chr3:84112810-84112648 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 1-179
Cow position: chr3:32704057-32704236 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 63

Conread position: 1-180
Cow position: chr3:596513-596341 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 1-180
Cow position: chr3:3983017-3982843 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:10243036-10242865 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:14798802-14798628 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 29, 33

Conread position: 1-180
Cow position: chr3:14862587-14862411 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 143, 42

Conread position: 1-180
Cow position: chr3:18461735-18461904 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:19590328-19590499 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:19754580-19754747 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:19946624-19946455 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:21004201-21004029 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:21180316-21180487 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:22725387-22725558 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:23009773-23009602 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:23205497-23205671 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr3:23287954-23288125 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr3:24347576-24347406 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:24637815-24637645 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:30320645-30320471 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:33844213-33844386 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 1-180
Cow position: chr3:34088929-34089102 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:36876278-36876451 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:39556203-39556377 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 62, 114

Conread position: 1-180
Cow position: chr3:40825779-40825606 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:41082553-41082381 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:42151403-42151575 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 160, 38

Conread position: 1-180
Cow position: chr3:43190889-43191063 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:45976883-45976710 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 1-180
Cow position: chr3:46752014-46751840 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 60

Conread position: 1-180
Cow position: chr3:48239640-48239470 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:48525128-48524956 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 134, 38

Conread position: 1-180
Cow position: chr3:49542826-49542994 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr3:49733953-49733779 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:49742845-49742671 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:55729428-55729257 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:56337570-56337744 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr3:57455387-57455216 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:57482342-57482512 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr3:57741908-57741740 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 127, 38

Conread position: 1-180
Cow position: chr3:59863940-59863775 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:61676081-61675910 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr3:62881747-62881579 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr3:63001227-63001395 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 141, 38

Conread position: 1-180
Cow position: chr3:64025749-64025923 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 147
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:64691430-64691251 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 51, 38

Conread position: 1-180
Cow position: chr3:69931452-69931626 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:69963420-69963585 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:72389340-72389171 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr3:76004413-76004584 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:77581000-77580835 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr3:78025051-78025225 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-181
Cow position: chr3:35885954-35886135 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 38

Conread position: 1-182
Cow position: chr3:24586862-24587038 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-184
Cow position: chr3:3790020-3789842 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 181, 25

Conread position: 1-186
Cow position: chr3:49998519-49998339 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 2-174
Cow position: chr3:19719150-19719323 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 123

Conread position: 2-176
Cow position: chr3:29129474-29129309 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 2-176
Cow position: chr3:30616556-30616725 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 144
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr3:36862074-36862243 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 144
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr3:77452670-77452504 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 2-177
Cow position: chr3:15053331-15053492 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 38

Conread position: 2-177
Cow position: chr3:82931018-82930847 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 160, 24

Conread position: 2-180
Cow position: chr3:3525426-3525253 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr3:50124616-50124784 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr3:56399629-56399454 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 39

Conread position: 2-180
Cow position: chr3:63256499-63256323 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 51, 15

Conread position: 2-181
Cow position: chr3:19795818-19795989 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 3-174
Cow position: chr3:6784789-6784623 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 3-174
Cow position: chr3:47079230-47079393 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-174
Cow position: chr3:56328504-56328338 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr3:20380330-20380512 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 57, 36

Conread position: 3-176
Cow position: chr3:34014721-34014553 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 134, 36

Conread position: 3-176
Cow position: chr3:46858905-46859073 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 3-177
Cow position: chr3:63239845-63240007 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 3-180
Cow position: chr3:2904655-2904827 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 3-180
Cow position: chr3:34040196-34040365 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 4-174
Cow position: chr3:72106415-72106579 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 114, 35

Conread position: 4-176
Cow position: chr3:46504946-46504782 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 4-176
Cow position: chr3:66969501-66969668 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr3:31121765-31121935 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr3:63278239-63278404 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr3:66622594-66622426 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr3:75039467-75039640 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 35, 55

Conread position: 5-176
Cow position: chr3:28670466-28670301 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 5-180
Cow position: chr3:24443717-24443887 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 5-180
Cow position: chr3:36689816-36689985 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 6-171
Cow position: chr3:24355976-24355815 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 6-177
Cow position: chr3:32361803-32361640 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 88, 24

Conread position: 6-180
Cow position: chr3:5885877-5885715 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 157, 33

Conread position: 7-176
Cow position: chr3:37009803-37009967 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 14-176
Cow position: chr3:35611528-35611375 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 14-180
Cow position: chr3:2708500-2708657 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 15-180
Cow position: chr3:37644655-37644499 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 22-175
Cow position: chr3:6663776-6663628 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 25-176
Cow position: chr3:4288441-4288296 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 38-176
Cow position: chr3:30329786-30329924 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 26

Conread position: 52-180
Cow position: chr3:11784208-11784336 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 58-176
Cow position: chr3:15657210-15657326 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 59-176
Cow position: chr3:33635594-33635479 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 59-180
Cow position: chr3:5951858-5951980 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 59-180
Cow position: chr3:18813841-18813720 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 63-176
Cow position: chr3:63201082-63200969 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 79-176
Cow position: chr3:70719826-70719729 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-118
Cow position: chr4:34688664-34688776 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-142
Cow position: chr4:17539817-17539955 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 39

Conread position: 1-143
Cow position: chr4:6568566-6568429 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-146
Cow position: chr4:67393454-67393315 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-155
Cow position: chr4:18327143-18326994 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 1-160
Cow position: chr4:58812673-58812519 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 131
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-161
Cow position: chr4:44727778-44727623 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 1-162
Cow position: chr4:6864041-6864197 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr4:34182513-34182662 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-163
Cow position: chr4:45654980-45655136 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 31

Conread position: 1-173
Cow position: chr4:61722776-61722943 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 1-174
Cow position: chr4:532070-531902 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr4:42923982-42924152 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 40

Conread position: 1-175
Cow position: chr4:43883302-43883134 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 1-176
Cow position: chr4:161354-161189 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:605810-605640 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:1240228-1240396 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:1928436-1928602 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 1-176
Cow position: chr4:3128008-3127838 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:4418238-4418068 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:5442342-5442509 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:6207761-6207594 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 1-176
Cow position: chr4:6267026-6267196 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:15459218-15459388 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:16061468-16061298 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:17034315-17034480 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:17234234-17234064 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:18336760-18336930 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 145
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:18815413-18815579 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:20605839-20605666 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 124, 34

Conread position: 1-176
Cow position: chr4:27336124-27335954 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr4:29605287-29605457 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:31637481-31637653 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 132, 38

Conread position: 1-176
Cow position: chr4:32214362-32214196 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:35306620-35306787 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:40217028-40216859 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:41473655-41473821 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:41956953-41956783 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:41961089-41960919 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:54811674-54811844 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:58622339-58622509 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:63000331-63000161 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr4:64799247-64799083 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr4:1369809-1369977 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 14

Conread position: 1-177
Cow position: chr4:5487199-5487363 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr4:12606690-12606860 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 1-177
Cow position: chr4:15815307-15815481 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 97, 38

Conread position: 1-177
Cow position: chr4:25224999-25225171 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 107, 38

Conread position: 1-177
Cow position: chr4:46712409-46712576 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr4:67683383-67683215 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:358070-357908 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:1048065-1048246 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 142, 38

Conread position: 1-180
Cow position: chr4:2350530-2350704 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:3355775-3355947 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 130, 38

Conread position: 1-180
Cow position: chr4:3448983-3448805 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 38

Conread position: 1-180
Cow position: chr4:6488181-6488351 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:10883727-10883555 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 38

Conread position: 1-180
Cow position: chr4:11108883-11109049 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-180
Cow position: chr4:16362392-16362221 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:16640798-16640627 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:17923769-17923943 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:25597299-25597470 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:25877595-25877428 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:28174893-28175065 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr4:31563032-31563203 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:33021440-33021614 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:33070652-33070822 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:33495748-33495572 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 123, 38

Conread position: 1-180
Cow position: chr4:34176796-34176970 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:36898567-36898395 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:42406809-42406638 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:43317461-43317635 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:43869639-43869464 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 130, 38

Conread position: 1-180
Cow position: chr4:44594178-44594346 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 39, 60

Conread position: 1-180
Cow position: chr4:47751533-47751364 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 39

Conread position: 1-180
Cow position: chr4:48029048-48028877 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:54971631-54971464 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr4:57986206-57986032 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:61241472-61241300 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr4:67382473-67382305 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-181
Cow position: chr4:68942396-68942571 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 22, 34

Conread position: 1-206
Cow position: chr4:20629420-20629225 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 2-176
Cow position: chr4:10055142-10054976 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 2-176
Cow position: chr4:21573952-21573786 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 2-177
Cow position: chr4:43899942-43900109 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 37

Conread position: 2-180
Cow position: chr4:5611807-5611980 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 2-180
Cow position: chr4:9798051-9798222 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 8, 38

Conread position: 2-180
Cow position: chr4:11391297-11391459 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 2-180
Cow position: chr4:21973469-21973648 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 160

Conread position: 2-180
Cow position: chr4:29033169-29032995 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 40

Conread position: 2-180
Cow position: chr4:50976784-50976619 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 3-174
Cow position: chr4:54188875-54188712 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 3-176
Cow position: chr4:45765730-45765897 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 117, 29

Conread position: 3-181
Cow position: chr4:47928001-47927830 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 4-180
Cow position: chr4:4378577-4378404 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 97, 35

Conread position: 4-180
Cow position: chr4:14141302-14141132 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 53

Conread position: 5-176
Cow position: chr4:963150-963316 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 7-180
Cow position: chr4:41977455-41977623 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 9, 29

Conread position: 11-180
Cow position: chr4:68836815-68836978 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 7, 34

Conread position: 15-176
Cow position: chr4:30473387-30473234 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 17-174
Cow position: chr4:34222909-34222760 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 20-174
Cow position: chr4:60044885-60045030 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 41-180
Cow position: chr4:12239094-12239225 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 44-160
Cow position: chr4:30958977-30958864 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 44-176
Cow position: chr4:17091719-17091847 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 53-179
Cow position: chr4:18313357-18313482 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 62-180
Cow position: chr4:68109423-68109537 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 1-119
Cow position: chr5:74035821-74035708 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-149
Cow position: chr5:28222915-28223059 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 44, 34

Conread position: 1-161
Cow position: chr5:18249347-18249192 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr5:31120919-31121068 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 1-162
Cow position: chr5:34583923-34583767 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 132
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-167
Cow position: chr5:71622013-71622175 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 164, 38

Conread position: 1-174
Cow position: chr5:5105511-5105347 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chr5:18703948-18703781 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 83, 39

Conread position: 1-175
Cow position: chr5:47828036-47828199 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:3966725-3966555 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 93, 38

Conread position: 1-176
Cow position: chr5:4683510-4683680 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:4755888-4756058 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:4964086-4964251 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:5925674-5925844 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:6586174-6586341 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:10513987-10514157 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr5:10773970-10774140 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:11632982-11633144 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 39

Conread position: 1-176
Cow position: chr5:11922839-11923009 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:12132882-12132720 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:12730423-12730593 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:14544014-14544181 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 92, 38

Conread position: 1-176
Cow position: chr5:18120186-18120356 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:23958037-23958207 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:26076913-26077083 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:27196793-27196963 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:29031560-29031390 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:30567563-30567393 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:31708876-31708705 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 110, 38

Conread position: 1-176
Cow position: chr5:32775064-32774896 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 16, 39

Conread position: 1-176
Cow position: chr5:38661620-38661451 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:40130303-40130473 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 1-176
Cow position: chr5:42507049-42506879 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:45180806-45180973 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:46666295-46666124 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 43

Conread position: 1-176
Cow position: chr5:46792138-46791968 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:49118055-49118216 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:49488740-49488573 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 27, 32

Conread position: 1-176
Cow position: chr5:50605048-50605218 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 1-176
Cow position: chr5:51745514-51745350 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:54928624-54928794 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr5:58190467-58190637 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr5:58198310-58198144 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:59062931-59062761 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:59145660-59145490 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr5:72739377-72739546 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 1-177
Cow position: chr5:14657211-14657383 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 105, 41

Conread position: 1-177
Cow position: chr5:18559116-18559281 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr5:46649436-46649260 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 149, 38

Conread position: 1-177
Cow position: chr5:52436293-52436124 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 1-177
Cow position: chr5:57001790-57001619 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr5:70532117-70532288 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr5:73486634-73486805 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-178
Cow position: chr5:6152604-6152774 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-178
Cow position: chr5:30581625-30581454 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:1339634-1339807 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:2916716-2916544 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:3501837-3502008 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:3788514-3788340 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 47, 0

Conread position: 1-180
Cow position: chr5:7276120-7275946 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:10854529-10854701 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:10921132-10920960 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:12641153-12641328 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 137, 46

Conread position: 1-180
Cow position: chr5:18275281-18275112 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 1-180
Cow position: chr5:18900266-18900095 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:21523518-21523699 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 99, 38

Conread position: 1-180
Cow position: chr5:23232589-23232413 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 162, 29

Conread position: 1-180
Cow position: chr5:23685074-23685237 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 1-180
Cow position: chr5:24100939-24100764 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 18, 39

Conread position: 1-180
Cow position: chr5:24644569-24644745 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 39

Conread position: 1-180
Cow position: chr5:25929400-25929572 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 1-180
Cow position: chr5:26625916-26626090 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:27550172-27550347 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:34698770-34698599 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 1-180
Cow position: chr5:40791144-40790972 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 109, 42

Conread position: 1-180
Cow position: chr5:45702608-45702437 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 119, 38

Conread position: 1-180
Cow position: chr5:46003351-46003524 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:46735993-46736164 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:49521003-49520830 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:51167020-51167185 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:54462440-54462610 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:54786821-54787003 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 49

Conread position: 1-180
Cow position: chr5:54858809-54858979 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:57889125-57889299 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:58244533-58244705 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:64779717-64779891 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 147
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr5:69623860-69623690 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 1-181
Cow position: chr5:7141814-7141982 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-181
Cow position: chr5:18399200-18399372 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 1-181
Cow position: chr5:35496465-35496291 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-187
Cow position: chr5:26366870-26366688 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 147, 38

Conread position: 2-173
Cow position: chr5:34299163-34298999 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 117, 37

Conread position: 2-176
Cow position: chr5:10841106-10841272 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr5:24219449-24219284 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 2-177
Cow position: chr5:41525258-41525426 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 8, 38

Conread position: 2-180
Cow position: chr5:40347997-40348165 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 3-161
Cow position: chr5:64959162-64959312 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 3-176
Cow position: chr5:37379391-37379225 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 3-177
Cow position: chr5:34191220-34191054 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 37

Conread position: 3-180
Cow position: chr5:23667866-23668038 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 144
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr5:28015350-28015182 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 22, 37

Conread position: 3-180
Cow position: chr5:49222210-49222383 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 23, 37

Conread position: 3-181
Cow position: chr5:444809-444636 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 4-177
Cow position: chr5:37734636-37734469 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 55

Conread position: 4-180
Cow position: chr5:47342007-47341837 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 5-160
Cow position: chr5:7756572-7756421 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 36

Conread position: 5-168
Cow position: chr5:42043198-42043042 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 40

Conread position: 5-180
Cow position: chr5:4387507-4387343 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 6-176
Cow position: chr5:73443699-73443537 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 6-180
Cow position: chr5:37423435-37423266 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 20, 34

Conread position: 6-180
Cow position: chr5:44710098-44710267 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 7-181
Cow position: chr5:55993159-55993324 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 8-180
Cow position: chr5:34219221-34219393 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 27

Conread position: 9-177
Cow position: chr5:24152914-24152757 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 133, 30

Conread position: 15-176
Cow position: chr5:4016815-4016967 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 15-179
Cow position: chr5:47358993-47358836 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 162, 24

Conread position: 19-176
Cow position: chr5:48226299-48226453 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 18, 36

Conread position: 20-177
Cow position: chr5:27063098-27063251 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 23-176
Cow position: chr5:25902195-25902343 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 30-174
Cow position: chr5:41066440-41066301 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 31-176
Cow position: chr5:9056925-9056780 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 34-176
Cow position: chr5:23846861-23846999 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 37-176
Cow position: chr5:13407851-13407716 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 59-163
Cow position: chr5:27654985-27654883 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 59-176
Cow position: chr5:56541277-56541394 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 59-179
Cow position: chr5:50390870-50390990 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 60-171
Cow position: chr5:32953320-32953213 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 60-180
Cow position: chr5:27490181-27490066 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 62-177
Cow position: chr5:23830083-23830201 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 64-180
Cow position: chr5:26095586-26095473 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 66-180
Cow position: chr5:280421-280307 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 68-177
Cow position: chr5:18884336-18884445 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 77-180
Cow position: chr5:47470007-47469904 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-119
Cow position: chr6:14502255-14502140 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 1-128
Cow position: chr6:25375666-25375788 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-142
Cow position: chr6:39349818-39349682 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-146
Cow position: chr6:28400819-28400959 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 122
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-149
Cow position: chr6:24625161-24625304 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 1-157
Cow position: chr6:28702281-28702431 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-158
Cow position: chr6:15278127-15278279 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 1-160
Cow position: chr6:50720541-50720387 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr6:1508076-1508232 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 133
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-162
Cow position: chr6:3573210-3573055 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr6:58029570-58029418 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr6:68029602-68029449 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-169
Cow position: chr6:43620157-43619994 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr6:2377129-2376967 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr6:28064423-28064255 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr6:50112528-50112363 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 1-174
Cow position: chr6:62577757-62577924 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chr6:21833221-21833390 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chr6:42266161-42265997 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 1-176
Cow position: chr6:328934-329100 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:1408222-1408391 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:1796238-1796408 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:2557076-2556903 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 20, 41

Conread position: 1-176
Cow position: chr6:3151656-3151489 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr6:3757161-3756994 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:6094663-6094494 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:7138906-7139076 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:10043644-10043474 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:11019086-11018917 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:12663888-12664058 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:13308956-13309126 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:13849502-13849333 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 1-176
Cow position: chr6:13979188-13979019 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr6:14927886-14927719 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:16050863-16051033 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 145
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:16982370-16982540 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr6:18513980-18513813 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:19104484-19104652 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:20351664-20351834 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:28186408-28186578 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:28489140-28489310 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:31586835-31587005 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:32001853-32002021 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 130, 38

Conread position: 1-176
Cow position: chr6:33465391-33465229 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:33810065-33809895 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:34128885-34128718 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:37387007-37386840 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:37478648-37478481 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:39911753-39911583 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:44148125-44148295 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:45902460-45902630 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:45936690-45936523 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:51149366-51149197 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:53544526-53544356 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 146
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:55238120-55237950 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:60378588-60378418 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:61052669-61052839 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr6:62664201-62664038 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 157, 38

Conread position: 1-176
Cow position: chr6:67552910-67552740 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr6:6184537-6184707 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr6:6186670-6186500 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr6:11164094-11164265 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 44

Conread position: 1-177
Cow position: chr6:24241716-24241546 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr6:66234226-66234057 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 132, 38

Conread position: 1-180
Cow position: chr6:49147-49319 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:183117-183286 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:477969-477798 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr6:704643-704468 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 39

Conread position: 1-180
Cow position: chr6:916470-916296 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:1820201-1820369 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr6:3485969-3486143 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr6:5750357-5750186 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:5947351-5947528 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 124, 38

Conread position: 1-180
Cow position: chr6:8536875-8537049 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:11722769-11722943 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr6:14133317-14133491 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:14143063-14143237 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr6:15138741-15138914 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:16592398-16592227 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:16767409-16767584 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 23, 57

Conread position: 1-180
Cow position: chr6:17048734-17048563 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:18913049-18913223 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:19018531-19018363 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:20557524-20557691 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:21975088-21974917 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:25216728-25216557 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:25791273-25791444 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:27474844-27474673 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr6:28171332-28171161 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 1-180
Cow position: chr6:29479411-29479242 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:30272462-30272636 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:34492582-34492408 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:34505617-34505790 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:35874284-35874457 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:38273997-38273834 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:38874233-38874404 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:39332103-39332274 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:39435494-39435668 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:40864604-40864774 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:40974613-40974439 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 1-180
Cow position: chr6:41229870-41229699 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:43777684-43777515 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr6:44018402-44018574 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:47040760-47040934 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:50486369-50486543 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:51091789-51091615 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr6:51716971-51716797 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:51732507-51732336 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr6:53971258-53971088 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:55539844-55540018 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:59595681-59595510 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr6:64718748-64718574 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 1-180
Cow position: chr6:65844048-65843866 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 89, 38

Conread position: 1-180
Cow position: chr6:65906361-65906534 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 1-180
Cow position: chr6:65929670-65929494 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 103, 57

Conread position: 1-180
Cow position: chr6:66547887-66547712 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 1-189
Cow position: chr6:36530712-36530535 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-196
Cow position: chr6:2580845-2580659 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 2-158
Cow position: chr6:33950735-33950887 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 38

Conread position: 2-176
Cow position: chr6:17595861-17596030 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr6:40277499-40277330 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr6:46296697-46296530 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 2-177
Cow position: chr6:1275569-1275738 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 2-177
Cow position: chr6:41676364-41676193 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 81, 42

Conread position: 2-180
Cow position: chr6:237431-237597 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr6:3887082-3887255 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr6:10611264-10611094 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 34

Conread position: 2-184
Cow position: chr6:12628347-12628173 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 57

Conread position: 3-176
Cow position: chr6:3685314-3685150 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr6:11870504-11870672 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 144
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr6:15925140-15925304 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr6:32677533-32677702 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 3-177
Cow position: chr6:1106808-1106971 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 3-180
Cow position: chr6:27152017-27152189 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 3-181
Cow position: chr6:6080414-6080582 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 4-180
Cow position: chr6:27527564-27527736 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 123, 35

Conread position: 4-180
Cow position: chr6:50570623-50570459 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 5-177
Cow position: chr6:10646106-10645944 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 142, 34

Conread position: 5-180
Cow position: chr6:1536129-1535954 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 120, 34

Conread position: 6-176
Cow position: chr6:43574913-43574752 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 6-180
Cow position: chr6:40552159-40552322 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 7-180
Cow position: chr6:8204598-8204433 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 21-177
Cow position: chr6:43791174-43791324 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 22-162
Cow position: chr6:26776763-26776901 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 67, 17

Conread position: 22-180
Cow position: chr6:15895389-15895538 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 22-180
Cow position: chr6:57472220-57472067 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 30-180
Cow position: chr6:63705244-63705390 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 36-176
Cow position: chr6:13758117-13757981 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 36-177
Cow position: chr6:40000095-40000228 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 48-180
Cow position: chr6:15178051-15177922 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 59-176
Cow position: chr6:31010413-31010530 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 59-177
Cow position: chr6:8758903-8759021 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr6:43800860-43800979 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 61-180
Cow position: chr6:22931547-22931666 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 63-177
Cow position: chr6:58603854-58603741 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 75-176
Cow position: chr6:46479488-46479387 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 103-497
Cow position: chr6:38672002-38671621 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 87

Conread position: 508-863
Cow position: chr6:38671567-38671205 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 58

Conread position: 1-146
Cow position: chr7:21424848-21424988 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-150
Cow position: chr7:1331896-1332040 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 122
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-151
Cow position: chr7:39531464-39531608 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-161
Cow position: chr7:68445116-68444964 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1-162
Cow position: chr7:1722627-1722782 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 93, 38

Conread position: 1-162
Cow position: chr7:22346271-22346116 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr7:59686481-59686328 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-170
Cow position: chr7:66011135-66010975 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 120, 38

Conread position: 1-173
Cow position: chr7:1601430-1601598 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 1-176
Cow position: chr7:8465-8298 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 34

Conread position: 1-176
Cow position: chr7:13392-13562 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr7:547369-547202 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:3298151-3298323 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 121, 38

Conread position: 1-176
Cow position: chr7:5260421-5260588 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:6626856-6627026 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:6666018-6665848 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:6722550-6722380 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:7261041-7260871 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr7:7276926-7276756 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:8337896-8337729 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:11461611-11461781 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr7:19044692-19044860 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:20061992-20061826 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:20151195-20151365 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:20434343-20434176 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:20558301-20558131 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:20772067-20772236 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 147, 38

Conread position: 1-176
Cow position: chr7:21322760-21322593 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:23535184-23535014 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:27099753-27099923 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:33809095-33808926 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 114, 29

Conread position: 1-176
Cow position: chr7:34818166-34817998 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:37165380-37165217 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:41144982-41145145 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 39

Conread position: 1-176
Cow position: chr7:41493367-41493197 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:45170056-45169886 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:46265685-46265515 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:49604052-49604222 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:60465237-60465067 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:61138704-61138869 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:61624154-61624320 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 34, 60

Conread position: 1-176
Cow position: chr7:61833445-61833620 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 104, 38

Conread position: 1-176
Cow position: chr7:64011942-64011772 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr7:64354534-64354364 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr7:65557901-65558068 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 1-177
Cow position: chr7:31876788-31876619 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 134, 38

Conread position: 1-177
Cow position: chr7:46900071-46900242 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr7:49827827-49827991 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 1-177
Cow position: chr7:51193210-51193041 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 39

Conread position: 1-177
Cow position: chr7:58336505-58336673 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr7:61577617-61577785 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr7:68853447-68853616 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:113132-112957 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 120, 38

Conread position: 1-180
Cow position: chr7:195381-195555 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:443741-443914 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 1-180
Cow position: chr7:537323-537495 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:8142455-8142625 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:10428904-10429076 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 138, 38

Conread position: 1-180
Cow position: chr7:11421063-11421235 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 1-180
Cow position: chr7:13531388-13531559 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:18935157-18935324 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:20796934-20797108 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:21125149-21125335 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 38

Conread position: 1-180
Cow position: chr7:21232487-21232658 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:21316674-21316500 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr7:21989152-21988980 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 127, 38

Conread position: 1-180
Cow position: chr7:24805970-24806140 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:24933040-24933211 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:26456721-26456895 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 1-180
Cow position: chr7:27458215-27458389 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:27790002-27789829 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:33066192-33066360 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:33403363-33403537 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:34151464-34151290 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:34414538-34414710 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 141, 38

Conread position: 1-180
Cow position: chr7:34488436-34488262 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:38399336-38399165 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:39095971-39096145 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:39552822-39552990 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 60

Conread position: 1-180
Cow position: chr7:39596816-39596988 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:39794373-39794199 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:42225279-42225450 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 118, 39

Conread position: 1-180
Cow position: chr7:42297770-42297937 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:42302938-42303107 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:43395657-43395829 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:52408056-52407885 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:54697812-54697642 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 1-180
Cow position: chr7:59773832-59773658 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:60727939-60728109 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:61810821-61810648 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:62990240-62990414 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:63388545-63388376 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr7:66907768-66907595 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 110, 38

Conread position: 1-182
Cow position: chr7:19467948-19468124 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 1-183
Cow position: chr7:55535398-55535572 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-189
Cow position: chr7:39749242-39749059 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 115
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-189
Cow position: chr7:40005392-40005578 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 43

Conread position: 2-162
Cow position: chr7:67431076-67430917 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 37

Conread position: 2-163
Cow position: chr7:69113469-69113315 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 34

Conread position: 2-174
Cow position: chr7:26927656-26927823 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 140
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr7:25137514-25137349 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 2-176
Cow position: chr7:34415834-34416003 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 18, 33

Conread position: 2-176
Cow position: chr7:64352248-64352080 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 2-176
Cow position: chr7:65813354-65813185 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 2-177
Cow position: chr7:736226-736399 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 34

Conread position: 2-179
Cow position: chr7:29363948-29364109 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 2-180
Cow position: chr7:43280402-43280230 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr7:58349520-58349694 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 39

Conread position: 2-180
Cow position: chr7:59140189-59140019 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 55

Conread position: 2-180
Cow position: chr7:59681925-59681736 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 38

Conread position: 2-180
Cow position: chr7:63955505-63955675 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr7:67496748-67496574 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 11, 25

Conread position: 2-182
Cow position: chr7:6801715-6801538 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 135, 37

Conread position: 3-152
Cow position: chr7:25442293-25442149 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 3-157
Cow position: chr7:48637237-48637091 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr7:21314412-21314247 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 116, 36

Conread position: 3-176
Cow position: chr7:55039963-55040131 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 3-177
Cow position: chr7:33069985-33070151 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 3-177
Cow position: chr7:34243159-34243329 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 3-177
Cow position: chr7:42872639-42872476 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr7:3122397-3122225 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr7:29472969-29472800 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr7:34667443-34667265 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 41

Conread position: 3-180
Cow position: chr7:37022576-37022408 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 3-185
Cow position: chr7:52802080-52802258 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 23

Conread position: 4-162
Cow position: chr7:950724-950574 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr7:27107241-27107410 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 37

Conread position: 4-180
Cow position: chr7:47191227-47191392 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 5-160
Cow position: chr7:46748499-46748350 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 5-180
Cow position: chr7:49071495-49071665 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 122, 34

Conread position: 6-176
Cow position: chr7:18855684-18855521 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 127, 42

Conread position: 7-176
Cow position: chr7:27578417-27578580 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 9-163
Cow position: chr7:45953215-45953066 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 119, 7

Conread position: 9-174
Cow position: chr7:38146218-38146378 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 135
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 31

Conread position: 11-180
Cow position: chr7:21241229-21241390 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 14-180
Cow position: chr7:40264702-40264864 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 25, 19

Conread position: 14-180
Cow position: chr7:65870997-65871157 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 17-177
Cow position: chr7:44218586-44218432 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 19-180
Cow position: chr7:63925378-63925534 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 20-180
Cow position: chr7:27347111-27347266 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 22

Conread position: 20-180
Cow position: chr7:33071476-33071628 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 126, 19

Conread position: 30-176
Cow position: chr7:52764776-52764639 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 35-180
Cow position: chr7:66572520-66572659 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 14

Conread position: 36-162
Cow position: chr7:56823203-56823081 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 36-176
Cow position: chr7:1089323-1089187 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 84, 21

Conread position: 36-180
Cow position: chr7:3127825-3127688 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 36-180
Cow position: chr7:3321650-3321790 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 49-180
Cow position: chr7:14212920-14213051 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 49-180
Cow position: chr7:28087568-28087440 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 50-176
Cow position: chr7:24744195-24744322 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 69, 63

Conread position: 52-176
Cow position: chr7:47973836-47973961 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 52-177
Cow position: chr7:1368208-1368333 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 59-174
Cow position: chr7:25434845-25434732 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 59-176
Cow position: chr7:901653-901769 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 59-176
Cow position: chr7:45929915-45930031 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 59-180
Cow position: chr7:42427313-42427192 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr7:62607856-62607976 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 105
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 61-180
Cow position: chr7:45946683-45946802 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 65-177
Cow position: chr7:67677531-67677420 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 83-176
Cow position: chr7:30300862-30300955 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-143
Cow position: chr8:11240593-11240730 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-152
Cow position: chr8:47659618-47659764 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-157
Cow position: chr8:3955748-3955597 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-157
Cow position: chr8:29922651-29922799 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 129
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-158
Cow position: chr8:41949917-41949766 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 1-160
Cow position: chr8:6203581-6203730 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr8:32629304-32629460 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 132
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-172
Cow position: chr8:32316881-32317047 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 1-174
Cow position: chr8:10751046-10750882 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr8:32649405-32649241 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr8:43339-43502 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 1-176
Cow position: chr8:6062768-6062936 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:6465580-6465410 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:8515380-8515550 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:8554012-8554179 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:9738236-9738070 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:11604936-11604766 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 1-176
Cow position: chr8:14257790-14257620 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:14589168-14589337 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:14630526-14630696 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:15223513-15223343 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:17313740-17313573 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:17382411-17382578 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:19333277-19333110 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:21041921-21042091 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:21251944-21251777 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:22569595-22569765 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:24191678-24191508 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:25413323-25413157 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:26877949-26877779 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:29009308-29009138 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:30156806-30156640 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr8:30490224-30490394 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr8:32435144-32435310 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:35129093-35129263 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:36786091-36786261 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:36810843-36810676 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:38393336-38393166 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:42153596-42153765 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 1-176
Cow position: chr8:42318567-42318736 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:43541846-43542016 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:49414772-49414606 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 127, 38

Conread position: 1-176
Cow position: chr8:50431440-50431611 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 81, 38

Conread position: 1-176
Cow position: chr8:53837643-53837481 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr8:55271824-55271991 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr8:1116877-1117054 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 96

Conread position: 1-177
Cow position: chr8:1569824-1569653 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 1-177
Cow position: chr8:1934985-1935149 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr8:7164056-7163885 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr8:9537808-9537973 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 1-177
Cow position: chr8:11764658-11764485 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 1-177
Cow position: chr8:13372605-13372434 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr8:28881377-28881205 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 38

Conread position: 1-177
Cow position: chr8:36633811-36633979 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 1-177
Cow position: chr8:45069641-45069473 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr8:46059256-46059419 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr8:46950391-46950226 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr8:56884925-56884755 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr8:60066580-60066416 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr8:1467829-1467655 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:1582159-1581984 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 122, 34

Conread position: 1-180
Cow position: chr8:3333730-3333557 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr8:4272975-4272806 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:4689103-4688929 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:5019715-5019541 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:5244707-5244875 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:8913426-8913257 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:9640599-9640424 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 116, 38

Conread position: 1-180
Cow position: chr8:11835235-11835061 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr8:12312183-12312350 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr8:14693849-14694023 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 138, 16

Conread position: 1-180
Cow position: chr8:20090904-20091074 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:24913583-24913757 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:34399258-34399093 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:35471999-35471835 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:36333611-36333782 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:38044430-38044600 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:38589649-38589818 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 48

Conread position: 1-180
Cow position: chr8:41642981-41643152 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 1-180
Cow position: chr8:41970358-41970530 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:42486612-42486441 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:44123801-44123630 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:44240987-44241157 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:45142712-45142884 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:45793046-45793220 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:46216902-46217080 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 55, 42

Conread position: 1-180
Cow position: chr8:46801211-46801385 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 1-180
Cow position: chr8:47467971-47468142 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr8:49219646-49219471 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 127, 38

Conread position: 1-180
Cow position: chr8:50928402-50928569 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr8:51317391-51317216 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 153, 38

Conread position: 1-180
Cow position: chr8:59260240-59260410 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-181
Cow position: chr8:23773339-23773166 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-189
Cow position: chr8:25773938-25774118 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 2-158
Cow position: chr8:52860952-52860797 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 104, 37

Conread position: 2-174
Cow position: chr8:12446706-12446865 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 2-175
Cow position: chr8:51604182-51604353 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 160, 37

Conread position: 2-175
Cow position: chr8:58183930-58184094 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 2-175
Cow position: chr8:58855389-58855223 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr8:21091631-21091800 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 143
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr8:24230132-24229968 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 2-176
Cow position: chr8:55087241-55087073 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 2-180
Cow position: chr8:2234035-2234207 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr8:21154642-21154815 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 2-180
Cow position: chr8:24873881-24874044 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr8:47675541-47675372 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 3-162
Cow position: chr8:4306888-4306741 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr8:29628911-29629079 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 143
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr8:34110439-34110268 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 37

Conread position: 3-180
Cow position: chr8:35544358-35544186 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 167, 31

Conread position: 4-159
Cow position: chr8:29032165-29032313 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 4-176
Cow position: chr8:11804506-11804343 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr8:2167818-2167985 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 4-180
Cow position: chr8:8228694-8228859 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 4-180
Cow position: chr8:18403630-18403798 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 4-180
Cow position: chr8:39193217-39193388 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr8:49285362-49285533 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 6-176
Cow position: chr8:12770185-12770013 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 29

Conread position: 6-180
Cow position: chr8:19824205-19824371 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 7-180
Cow position: chr8:34379841-34379674 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 7-180
Cow position: chr8:51701025-51700855 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 11-177
Cow position: chr8:47888545-47888385 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 11-189
Cow position: chr8:17960013-17960195 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 163

Conread position: 14-180
Cow position: chr8:46652531-46652370 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 15-180
Cow position: chr8:4296809-4296649 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 15-180
Cow position: chr8:45157851-45158013 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 117, 20

Conread position: 17-180
Cow position: chr8:12805462-12805304 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 36-180
Cow position: chr8:10740970-10741110 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 41-176
Cow position: chr8:29919316-29919445 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 59-174
Cow position: chr8:47067145-47067260 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 59-177
Cow position: chr8:30485756-30485874 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr8:11147616-11147734 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 59-180
Cow position: chr8:49693167-49693288 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr8:50996439-50996322 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 66-176
Cow position: chr8:54268394-54268284 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 66-180
Cow position: chr8:8954170-8954284 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 68-180
Cow position: chr8:14926236-14926348 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 75-180
Cow position: chr8:47489564-47489669 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-144
Cow position: chr9:5526280-5526418 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-147
Cow position: chr9:52408947-52409084 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-148
Cow position: chr9:14002397-14002255 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-150
Cow position: chr9:6921400-6921544 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 125
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-157
Cow position: chr9:44167949-44167800 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-159
Cow position: chr9:18023301-18023149 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 122, 29

Conread position: 1-161
Cow position: chr9:202936-203088 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-161
Cow position: chr9:37067219-37067065 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-169
Cow position: chr9:5453607-5453444 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-170
Cow position: chr9:26738372-26738207 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-172
Cow position: chr9:56176129-56175963 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-173
Cow position: chr9:10324173-10324006 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr9:2526645-2526479 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 1-174
Cow position: chr9:26421621-26421786 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr9:59508808-59508979 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 123, 34

Conread position: 1-175
Cow position: chr9:5861511-5861675 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 1-175
Cow position: chr9:47044325-47044156 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 143
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:128836-129006 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:778461-778631 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr9:1063344-1063514 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:1071931-1072099 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:1098948-1098779 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:1249639-1249810 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 153, 38

Conread position: 1-176
Cow position: chr9:2213500-2213332 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:2680929-2680759 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:3310973-3310807 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:4941135-4941305 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:5534863-5535031 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:6708701-6708871 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:6884684-6884514 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:17062033-17062201 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:30829110-30828941 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:34240745-34240914 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 146
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:35593725-35593891 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:37175159-37174989 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:38678490-38678320 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr9:45875874-45875704 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 1-176
Cow position: chr9:48795938-48796108 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr9:50326199-50326030 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:52525512-52525342 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr9:64012866-64013036 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr9:5627171-5627000 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-177
Cow position: chr9:6372293-6372458 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 39

Conread position: 1-177
Cow position: chr9:10856377-10856203 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 57

Conread position: 1-177
Cow position: chr9:17900212-17900383 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr9:51179817-51179988 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:1983172-1983004 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 1-180
Cow position: chr9:2288779-2288953 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 1-180
Cow position: chr9:2496371-2496545 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 114, 38

Conread position: 1-180
Cow position: chr9:2630956-2630783 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:2807002-2807176 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 130, 38

Conread position: 1-180
Cow position: chr9:3577128-3577302 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr9:5006331-5006160 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:6251625-6251443 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 112, 38

Conread position: 1-180
Cow position: chr9:7059708-7059882 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:9198473-9198298 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 127, 34

Conread position: 1-180
Cow position: chr9:9327681-9327855 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:10567991-10568161 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 1-180
Cow position: chr9:10939078-10938907 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:13473425-13473597 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 127, 37

Conread position: 1-180
Cow position: chr9:14044980-14044808 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 1-180
Cow position: chr9:14535388-14535217 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:16177949-16177775 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:17303612-17303783 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:18507472-18507643 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:19156926-19157099 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:20181070-20181234 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr9:21411664-21411493 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:22320349-22320516 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:27037465-27037292 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:28024164-28023991 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:28658694-28658868 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:30674425-30674251 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:31091539-31091366 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 8, 0

Conread position: 1-180
Cow position: chr9:31809937-31809766 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:32971732-32971558 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:34770511-34770349 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:35681764-35681591 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:35707930-35707757 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:35936654-35936832 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 112, 38

Conread position: 1-180
Cow position: chr9:37160459-37160630 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr9:42312047-42311876 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:43302865-43303038 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:44203714-44203888 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 147
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:47005096-47004922 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:52722780-52722605 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 111, 38

Conread position: 1-180
Cow position: chr9:54680387-54680569 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 38

Conread position: 1-180
Cow position: chr9:56302085-56302259 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:59480494-59480668 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:59538459-59538285 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr9:60324626-60324801 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 1-181
Cow position: chr9:2835639-2835809 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 1-196
Cow position: chr9:12250473-12250283 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 181, 38

Conread position: 2-176
Cow position: chr9:28680329-28680160 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 2-177
Cow position: chr9:33593492-33593322 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr9:1728951-1729126 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 120, 37

Conread position: 3-162
Cow position: chr9:2552067-2552224 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 98

Conread position: 3-170
Cow position: chr9:239147-239319 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 27

Conread position: 3-174
Cow position: chr9:2485265-2485427 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 3-175
Cow position: chr9:40416678-40416841 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 3-177
Cow position: chr9:12726801-12726633 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 3-180
Cow position: chr9:28356918-28356747 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr9:61238587-61238759 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 6-180
Cow position: chr9:1639094-1638928 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 29

Conread position: 6-180
Cow position: chr9:9015424-9015255 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 33, 0

Conread position: 6-180
Cow position: chr9:26123185-26123022 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 8-163
Cow position: chr9:56745786-56745937 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 13-175
Cow position: chr9:59430865-59430703 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 38

Conread position: 15-180
Cow position: chr9:59196196-59196039 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 16-180
Cow position: chr9:18833990-18834145 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 35-180
Cow position: chr9:1741517-1741655 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 36-180
Cow position: chr9:46040935-46041078 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 37-171
Cow position: chr9:31418350-31418220 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 44-176
Cow position: chr9:10644379-10644251 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 49-180
Cow position: chr9:5516136-5516006 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 52-174
Cow position: chr9:10746363-10746486 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 59-170
Cow position: chr9:4307046-4307157 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 59-176
Cow position: chr9:2872653-2872536 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 59-177
Cow position: chr9:8096586-8096471 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 59-180
Cow position: chr9:17313806-17313685 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 60-180
Cow position: chr9:60461434-60461554 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 61-180
Cow position: chr9:53529920-53529801 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 62-180
Cow position: chr9:29788394-29788510 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 63-180
Cow position: chr9:1994112-1994226 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 63-180
Cow position: chr9:7005023-7004910 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 64-174
Cow position: chr9:24422652-24422762 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 86-177
Cow position: chr9:20780175-20780084 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-145
Cow position: chrX:2560682-2560821 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-146
Cow position: chrX:43437641-43437780 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-148
Cow position: chrX:36691183-36691326 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 1-152
Cow position: chrX:29171518-29171660 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-157
Cow position: chrX:1941095-1941246 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-157
Cow position: chrX:30013258-30013109 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 118, 38

Conread position: 1-161
Cow position: chrX:41153058-41152901 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 38

Conread position: 1-162
Cow position: chrX:29759187-29759342 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-171
Cow position: chrX:20185488-20185322 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 16

Conread position: 1-172
Cow position: chrX:3082870-3083036 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chrX:6870817-6870985 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chrX:26274224-26274063 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chrX:31494999-31494830 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 150, 38

Conread position: 1-174
Cow position: chrX:42008895-42008732 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chrX:672939-673106 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 43

Conread position: 1-175
Cow position: chrX:3418955-3419123 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chrX:45375768-45375937 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:2047354-2047187 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:2273566-2273406 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:2486919-2486749 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:2578689-2578519 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:3360093-3359924 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:5281516-5281686 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:5321449-5321619 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:5333165-5333335 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:5360272-5360105 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:5865404-5865235 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:6247915-6248079 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chrX:6580207-6580037 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:7095762-7095595 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:7754169-7753999 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:8961559-8961724 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:9127348-9127178 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:10529524-10529691 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chrX:10867588-10867753 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:11462730-11462900 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:12345201-12345034 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:12359153-12358983 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:12652228-12652395 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chrX:13072183-13072352 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:13092743-13092912 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:13416157-13416335 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 28

Conread position: 1-176
Cow position: chrX:14461581-14461411 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:14597119-14596952 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chrX:15177171-15177336 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:15261354-15261516 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chrX:15978689-15978859 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:16360844-16361010 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:16464460-16464291 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:17053823-17053657 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chrX:17476143-17476313 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:17890809-17890639 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:18657538-18657708 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:19398039-19397870 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:19474885-19475058 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 145
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 163, 38

Conread position: 1-176
Cow position: chrX:20034143-20034309 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:20357737-20357907 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:20741364-20741534 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:21766895-21766725 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:22565422-22565592 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:22616918-22617088 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:23133864-23133702 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:24730913-24730743 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:26443813-26443645 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 132, 29

Conread position: 1-176
Cow position: chrX:27424020-27424190 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:27591754-27591921 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:28587244-28587075 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:28754074-28754244 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:29095052-29095222 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:29909162-29909329 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chrX:29911597-29911431 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:30167812-30167979 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:30437170-30437000 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:31979587-31979753 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:32064899-32065069 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:34093564-34093734 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:35532122-35531955 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:35938757-35938931 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 63

Conread position: 1-176
Cow position: chrX:36536467-36536633 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:37851408-37851239 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:39561669-39561838 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chrX:39712816-39712649 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chrX:2814214-2814385 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chrX:3143101-3142931 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 1-177
Cow position: chrX:5295288-5295461 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 151, 38

Conread position: 1-177
Cow position: chrX:12312715-12312887 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chrX:15040280-15040451 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chrX:16023028-16022857 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 1-177
Cow position: chrX:20651708-20651539 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 40

Conread position: 1-177
Cow position: chrX:20725236-20725065 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chrX:23573538-23573709 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chrX:30059444-30059276 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chrX:45417336-45417508 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 109, 38

Conread position: 1-180
Cow position: chrX:731292-731466 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:1549244-1549072 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 39

Conread position: 1-180
Cow position: chrX:2480365-2480537 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 1-180
Cow position: chrX:4906728-4906902 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:6280532-6280708 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 61, 39

Conread position: 1-180
Cow position: chrX:7552543-7552717 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chrX:9094909-9094738 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:12464271-12464096 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 84, 38

Conread position: 1-180
Cow position: chrX:13080487-13080659 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 1-180
Cow position: chrX:13407021-13407190 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 1-180
Cow position: chrX:16045234-16045067 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:16701947-16701773 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chrX:16710229-16710055 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 1-180
Cow position: chrX:16781548-16781378 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 38

Conread position: 1-180
Cow position: chrX:16804876-16805050 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:16809621-16809795 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:21225743-21225569 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:21388846-21388675 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 1-180
Cow position: chrX:21413861-21413690 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 1-180
Cow position: chrX:21492432-21492257 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 16, 39

Conread position: 1-180
Cow position: chrX:21591552-21591381 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:21751395-21751569 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:21831778-21831604 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:22810158-22809987 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:23021580-23021406 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chrX:23394871-23394697 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:24110306-24110480 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 20

Conread position: 1-180
Cow position: chrX:26756377-26756551 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:27978554-27978725 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:28625363-28625532 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chrX:30181662-30181836 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:30229848-30230018 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 1-180
Cow position: chrX:31200822-31200653 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1-180
Cow position: chrX:36838983-36838808 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 124, 38

Conread position: 1-180
Cow position: chrX:37814413-37814239 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chrX:38149862-38149687 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 1-180
Cow position: chrX:39697033-39696862 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:43074009-43073839 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 1-180
Cow position: chrX:48856239-48856413 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 162, 27

Conread position: 1-181
Cow position: chrX:23279290-23279118 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-181
Cow position: chrX:23388284-23388459 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-181
Cow position: chrX:23453789-23453963 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 146
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-181
Cow position: chrX:41886735-41886908 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 2-157
Cow position: chrX:11147077-11147224 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 2-162
Cow position: chrX:16036171-16036325 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chrX:2500912-2500743 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chrX:8481717-8481548 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chrX:13929468-13929637 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chrX:18221681-18221512 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 2-176
Cow position: chrX:21342673-21342507 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 2-177
Cow position: chrX:22818338-22818170 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chrX:5366733-5366903 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 151, 37

Conread position: 2-180
Cow position: chrX:26623547-26623718 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chrX:32328476-32328303 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 59

Conread position: 3-173
Cow position: chrX:13180291-13180460 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 36

Conread position: 3-174
Cow position: chrX:24770594-24770755 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chrX:3427397-3427231 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 3-176
Cow position: chrX:7119753-7119585 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chrX:9010597-9010432 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chrX:24445947-24446115 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chrX:24468859-24469024 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chrX:28520338-28520503 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chrX:5852858-5853034 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 44

Conread position: 3-180
Cow position: chrX:17665535-17665707 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chrX:26769449-26769620 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 3-181
Cow position: chrX:24412289-24412120 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 4-180
Cow position: chrX:22126508-22126676 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 5-180
Cow position: chrX:5247653-5247485 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 35

Conread position: 6-168
Cow position: chrX:22590580-22590740 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 34

Conread position: 7-176
Cow position: chrX:2381759-2381595 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 7-176
Cow position: chrX:28505003-28505167 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 0

Conread position: 8-163
Cow position: chrX:21000459-21000311 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 8-175
Cow position: chrX:31511869-31511702 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 31

Conread position: 8-176
Cow position: chrX:11458544-11458708 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 111, 31

Conread position: 9-176
Cow position: chrX:14783222-14783381 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 15-176
Cow position: chrX:6236577-6236730 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 17-174
Cow position: chrX:26397871-26398023 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 17-177
Cow position: chrX:30137608-30137762 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 17-180
Cow position: chrX:503786-503944 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 20-176
Cow position: chrX:3373674-3373825 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 20-176
Cow position: chrX:28559627-28559778 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 21-176
Cow position: chrX:15622247-15622397 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 21-180
Cow position: chrX:38124641-38124489 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 33-180
Cow position: chrX:6373790-6373645 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 23

Conread position: 33-180
Cow position: chrX:18246372-18246225 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 36-176
Cow position: chrX:9170144-9170278 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 36-176
Cow position: chrX:24323162-24323298 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 44-180
Cow position: chrX:27497105-27496976 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 48-176
Cow position: chrX:39565098-39565225 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 57-176
Cow position: chrX:3466428-3466547 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 59-162
Cow position: chrX:30135886-30135787 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 59-176
Cow position: chrX:21267858-21267974 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 61-180
Cow position: chrX:18951507-18951623 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 61-180
Cow position: chrX:20133939-20134057 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 64-174
Cow position: chrX:20799507-20799397 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 69, 49