Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8038N08.5 |
| Conread position: | 483-738 |
| Cow position: | chr1:33887524-33887281 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 105, 96 |
| Conread position: | 489-741 |
| Cow position: | chr1:40997623-40997866 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 76 |
| Conread position: | 489-741 |
| Cow position: | chr1:79665718-79665465 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 101, 9 |
| Conread position: | 490-739 |
| Cow position: | chr1:12971140-12970903 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 101, 114 |
| Conread position: | 492-751 |
| Cow position: | chr1:89382519-89382773 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 217, 132 |
| Conread position: | 499-741 |
| Cow position: | chr1:73490349-73490590 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 104 |
| Conread position: | 507-668 |
| Cow position: | chr1:16275260-16275425 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 84, 97 |
| Conread position: | 508-742 |
| Cow position: | chr1:69260405-69260639 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 124, 72 |
| Conread position: | 510-737 |
| Cow position: | chr1:64767045-64767268 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 122, 74 |
| Conread position: | 510-751 |
| Cow position: | chr1:69116344-69116581 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 113, 64 |
| Conread position: | 516-742 |
| Cow position: | chr1:49755597-49755368 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 38, 152 |
| Conread position: | 493-751 |
| Cow position: | chr10:33737849-33738092 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 127, 97 |
| Conread position: | 504-739 |
| Cow position: | chr10:22587088-22587321 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 91, 151 |
| Conread position: | 516-741 |
| Cow position: | chr10:29746963-29747184 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 60 |
| Conread position: | 520-751 |
| Cow position: | chr10:15238745-15238517 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 94, 140 |
| Conread position: | 528-661 |
| Cow position: | chr10:1856659-1856528 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 44-321 |
| Cow position: | chr11:12291345-12291061 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 139 |
| Conread position: | 354-751 |
| Cow position: | chr11:12290928-12290569 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 81 |
| Conread position: | 479-741 |
| Cow position: | chr11:36793563-36793818 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 144, 21 |
| Conread position: | 483-743 |
| Cow position: | chr11:48926890-48926640 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 105, 28 |
| Conread position: | 490-752 |
| Cow position: | chr11:18163358-18163095 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 102, 176 |
| Conread position: | 492-742 |
| Cow position: | chr11:39828023-39828268 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 144 |
| Conread position: | 494-702 |
| Cow position: | chr11:72096618-72096414 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 98 |
| Conread position: | 504-725 |
| Cow position: | chr11:38808679-38808901 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 86, 176 |
| Conread position: | 518-741 |
| Cow position: | chr11:62619851-62620068 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 22 |
| Conread position: | 798-974 |
| Cow position: | chr11:12290572-12290389 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 494-668 |
| Cow position: | chr12:41312291-41312115 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 98, 110 |
| Conread position: | 549-743 |
| Cow position: | chr12:42418719-42418909 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 136 |
| Conread position: | 481-738 |
| Cow position: | chr13:48650354-48650620 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 8 |
| Conread position: | 490-704 |
| Cow position: | chr13:4907152-4907365 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 92, 88 |
| Conread position: | 490-737 |
| Cow position: | chr13:45521035-45521280 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 97, 30 |
| Conread position: | 491-751 |
| Cow position: | chr13:33232183-33232436 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 97, 18 |
| Conread position: | 493-699 |
| Cow position: | chr13:30421206-30421412 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 101, 10 |
| Conread position: | 516-672 |
| Cow position: | chr13:11542901-11542741 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 517-724 |
| Cow position: | chr13:4962419-4962219 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 59 |
| Conread position: | 541-749 |
| Cow position: | chr13:18561217-18561012 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 484-741 |
| Cow position: | chr14:11302008-11302262 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 492-741 |
| Cow position: | chr14:13362980-13363229 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 98, 178 |
| Conread position: | 516-748 |
| Cow position: | chr14:31944689-31944464 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 152, 38 |
| Conread position: | 540-741 |
| Cow position: | chr14:48979130-48979335 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 110, 116 |
| Conread position: | 490-741 |
| Cow position: | chr15:4096602-4096851 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 101, 170 |
| Conread position: | 490-742 |
| Cow position: | chr15:35856083-35855832 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 103, 177 |
| Conread position: | 518-734 |
| Cow position: | chr15:11845211-11844999 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 105, 55 |
| Conread position: | 534-754 |
| Cow position: | chr15:4955023-4954805 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 103 |
| Conread position: | 546-748 |
| Cow position: | chr15:19193801-19194000 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 104 |
| Conread position: | 555-751 |
| Cow position: | chr15:4121488-4121679 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 152, 44 |
| Conread position: | 484-747 |
| Cow position: | chr16:53388924-53388669 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 130, 9 |
| Conread position: | 490-738 |
| Cow position: | chr16:24126015-24126252 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 124, 131 |
| Conread position: | 490-742 |
| Cow position: | chr16:23212921-23212671 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 100, 173 |
| Conread position: | 506-742 |
| Cow position: | chr16:9626047-9625810 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 154 |
| Conread position: | 507-742 |
| Cow position: | chr16:20922437-20922200 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 83, 168 |
| Conread position: | 565-743 |
| Cow position: | chr16:11196893-11196717 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 102 |
| Conread position: | 798-980 |
| Cow position: | chr16:53388667-53388468 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 47, 25 |
| Conread position: | 488-738 |
| Cow position: | chr17:7146679-7146929 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 100, 193 |
| Conread position: | 490-738 |
| Cow position: | chr17:40338756-40338512 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 115 |
| Conread position: | 507-738 |
| Cow position: | chr17:16362218-16362445 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 16, 141 |
| Conread position: | 488-649 |
| Cow position: | chr18:40065161-40064997 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 17, 11 |
| Conread position: | 490-742 |
| Cow position: | chr18:22534367-22534616 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 98, 30 |
| Conread position: | 487-738 |
| Cow position: | chr2:12007778-12008024 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 490-754 |
| Cow position: | chr2:15956355-15956619 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 113, 67 |
| Conread position: | 492-742 |
| Cow position: | chr2:19678869-19678629 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 217, 28 |
| Conread position: | 508-741 |
| Cow position: | chr2:56327672-56327443 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 96 |
| Conread position: | 527-751 |
| Cow position: | chr2:15332033-15332250 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 65, 102 |
| Conread position: | 485-710 |
| Cow position: | chr20:32862605-32862828 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 105, 5 |
| Conread position: | 517-741 |
| Cow position: | chr20:5340192-5339968 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 73, 87 |
| Conread position: | 517-742 |
| Cow position: | chr20:34282653-34282876 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 115, 66 |
| Conread position: | 489-734 |
| Cow position: | chr21:32919673-32919426 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 49, 117 |
| Conread position: | 485-752 |
| Cow position: | chr22:41390671-41390934 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 48, 63 |
| Conread position: | 486-751 |
| Cow position: | chr22:30996127-30996389 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 104, 17 |
| Conread position: | 490-751 |
| Cow position: | chr22:22648235-22648491 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 102, 30 |
| Conread position: | 492-736 |
| Cow position: | chr22:31217287-31217541 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 100, 48 |
| Conread position: | 505-713 |
| Cow position: | chr22:17631969-17631770 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 127, 68 |
| Conread position: | 530-747 |
| Cow position: | chr22:36489739-36489528 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 105 |
| Conread position: | 563-742 |
| Cow position: | chr22:31869727-31869904 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 29 |
| Conread position: | 432-766 |
| Cow position: | chr23:40928533-40928212 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 200, 7 |
| Conread position: | 485-661 |
| Cow position: | chr23:26319718-26319894 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 141, 112 |
| Conread position: | 489-739 |
| Cow position: | chr23:41204621-41204374 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 101, 52 |
| Conread position: | 490-643 |
| Cow position: | chr23:22960997-22960841 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 490-738 |
| Cow position: | chr24:26206012-26205765 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 102, 30 |
| Conread position: | 490-741 |
| Cow position: | chr24:20458151-20458391 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 100, 145 |
| Conread position: | 519-673 |
| Cow position: | chr24:13058546-13058704 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 549-751 |
| Cow position: | chr24:22437509-22437716 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 43, 133 |
| Conread position: | 798-980 |
| Cow position: | chr24:20458397-20458593 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 470-710 |
| Cow position: | chr25:16845603-16845374 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 108, 55 |
| Conread position: | 489-714 |
| Cow position: | chr25:7638085-7638309 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 97, 91 |
| Conread position: | 494-751 |
| Cow position: | chr25:6253671-6253413 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 70, 75 |
| Conread position: | 508-738 |
| Cow position: | chr25:24201142-24200919 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 120, 86 |
| Conread position: | 516-738 |
| Cow position: | chr25:15448092-15448312 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 72, 161 |
| Conread position: | 529-710 |
| Cow position: | chr25:16833178-16833356 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 69 |
| Conread position: | 516-742 |
| Cow position: | chr26:4183120-4182899 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 187, 86 |
| Conread position: | 486-747 |
| Cow position: | chr27:18166706-18166964 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 45 |
| Conread position: | 490-754 |
| Cow position: | chr27:20293371-20293109 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 97, 30 |
| Conread position: | 493-739 |
| Cow position: | chr27:15246266-15246030 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 114, 47 |
| Conread position: | 484-703 |
| Cow position: | chr28:5317740-5317514 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 5, 177 |
| Conread position: | 488-739 |
| Cow position: | chr28:11059819-11060073 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 195 |
| Conread position: | 489-741 |
| Cow position: | chr28:13632136-13632376 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 148, 51 |
| Conread position: | 459-742 |
| Cow position: | chr29:27939692-27939415 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 459-742 |
| Cow position: | chr29:35105528-35105803 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 15, 25 |
| Conread position: | 490-748 |
| Cow position: | chr29:4622452-4622715 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 108 |
| Conread position: | 438-738 |
| Cow position: | chr3:7850798-7851098 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 150, 46 |
| Conread position: | 489-728 |
| Cow position: | chr3:28746122-28745883 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 101, 178 |
| Conread position: | 495-691 |
| Cow position: | chr3:35239968-35240164 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 5 |
| Conread position: | 489-738 |
| Cow position: | chr4:54016481-54016232 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 101, 159 |
| Conread position: | 490-739 |
| Cow position: | chr4:64871732-64871976 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 100, 30 |
| Conread position: | 492-762 |
| Cow position: | chr4:23530429-23530166 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 128, 7 |
| Conread position: | 504-751 |
| Cow position: | chr4:21178801-21178557 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 118, 88 |
| Conread position: | 485-751 |
| Cow position: | chr5:59503941-59503670 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 106, 194 |
| Conread position: | 487-657 |
| Cow position: | chr5:50248189-50248015 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 489-738 |
| Cow position: | chr5:3096902-3097151 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 185, 32 |
| Conread position: | 490-760 |
| Cow position: | chr5:23246492-23246757 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 101, 13 |
| Conread position: | 515-754 |
| Cow position: | chr5:36249893-36249655 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 42, 89 |
| Conread position: | 488-739 |
| Cow position: | chr6:42338864-42338614 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 114, 104 |
| Conread position: | 490-741 |
| Cow position: | chr6:50367047-50366789 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 92, 24 |
| Conread position: | 492-672 |
| Cow position: | chr6:53479305-53479485 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 57 |
| Conread position: | 492-732 |
| Cow position: | chr6:9521816-9522047 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 98, 45 |
| Conread position: | 502-667 |
| Cow position: | chr6:38235015-38235182 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 508-741 |
| Cow position: | chr6:67712709-67712941 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 82, 94 |
| Conread position: | 540-752 |
| Cow position: | chr6:13332566-13332356 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 133 |
| Conread position: | 489-634 |
| Cow position: | chr7:43876587-43876446 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 101, 14 |
| Conread position: | 489-742 |
| Cow position: | chr7:35081401-35081647 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 101, 77 |
| Conread position: | 489-742 |
| Cow position: | chr7:42803633-42803882 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 103, 51 |
| Conread position: | 490-661 |
| Cow position: | chr7:49095537-49095364 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 490-742 |
| Cow position: | chr7:35526644-35526896 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 14, 185 |
| Conread position: | 492-742 |
| Cow position: | chr7:19900464-19900215 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 100, 179 |
| Conread position: | 493-671 |
| Cow position: | chr7:64219212-64219029 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 496-744 |
| Cow position: | chr7:54142342-54142106 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 94, 18 |
| Conread position: | 533-751 |
| Cow position: | chr7:41109572-41109347 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 46 |
| Conread position: | 798-974 |
| Cow position: | chr7:49094791-49094612 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 490-649 |
| Cow position: | chr8:10804568-10804407 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 100, 56 |
| Conread position: | 509-742 |
| Cow position: | chr8:58671596-58671822 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 123, 71 |
| Conread position: | 522-736 |
| Cow position: | chr8:54410383-54410173 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 110, 61 |
| Conread position: | 515-742 |
| Cow position: | chr9:44224244-44224020 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 77, 159 |
| Conread position: | 516-682 |
| Cow position: | chr9:3385405-3385238 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 118, 21 |
| Conread position: | 516-732 |
| Cow position: | chr9:7050553-7050765 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 74, 105 |
| Conread position: | 516-751 |
| Cow position: | chr9:737001-736770 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 89 |
| Conread position: | 487-657 |
| Cow position: | chrX:33635701-33635876 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 104, 44 |
| Conread position: | 490-751 |
| Cow position: | chrX:36035539-36035280 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 97, 182 |
| Conread position: | 493-751 |
| Cow position: | chrX:40270901-40271162 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 98, 151 |
| Conread position: | 517-751 |
| Cow position: | chrX:36214439-36214203 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 75, 161 |