Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039E19.5
        

               Conread position:
               175-563
               

               Cow position:
               chr10:608954-609340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 143
               

               Conread position:
               189-559
               

               Cow position:
               chr10:15076255-15076637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 24
               

               Conread position:
               230-545
               

               Cow position:
               chr10:24616798-24616464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               76, 131
               

               Conread position:
               254-450
               

               Cow position:
               chr10:67406821-67406625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               290-559
               

               Cow position:
               chr10:61619305-61619590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               12, 231
               

               Conread position:
               325-480
               

               Cow position:
               chr10:37648493-37648652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               557-802
               

               Cow position:
               chr10:2324331-2324574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               559-817
               

               Cow position:
               chr10:38300919-38301179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               159, 46
               

               Conread position:
               560-805
               

               Cow position:
               chr10:36473759-36474007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               51, 126
               

               Conread position:
               560-814
               

               Cow position:
               chr10:12988919-12989166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               90, 53
               

               Conread position:
               562-787
               

               Cow position:
               chr10:17189468-17189694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               100, 82
               

               Conread position:
               564-817
               

               Cow position:
               chr10:51854965-51855210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               102, 50
               

               Conread position:
               565-759
               

               Cow position:
               chr10:59281275-59281080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               142, 40
               

               Conread position:
               565-817
               

               Cow position:
               chr10:8500172-8500408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               153, 40
               

               Conread position:
               566-817
               

               Cow position:
               chr10:10029904-10029656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               117, 47
               

               Conread position:
               568-826
               

               Cow position:
               chr10:31623830-31624086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               573-813
               

               Cow position:
               chr10:58995227-58995464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               49, 32
               

               Conread position:
               605-823
               

               Cow position:
               chr10:19247954-19248172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               118, 54
               

               Conread position:
               681-817
               

               Cow position:
               chr10:59030461-59030325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               175-374
               

               Cow position:
               chr11:41461660-41461449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               178-545
               

               Cow position:
               chr11:56334108-56333752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               268
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               107, 57
               

               Conread position:
               178-556
               

               Cow position:
               chr11:45805761-45805375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               269
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               125, 212
               

               Conread position:
               182-559
               

               Cow position:
               chr11:71353879-71353488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               275
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               9, 25
               

               Conread position:
               189-464
               

               Cow position:
               chr11:20230127-20230409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               80, 17
               

               Conread position:
               191-556
               

               Cow position:
               chr11:52942527-52942155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 36
               

               Conread position:
               191-561
               

               Cow position:
               chr11:20714411-20714048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 26
               

               Conread position:
               217-564
               

               Cow position:
               chr11:24938844-24939217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               72, 139
               

               Conread position:
               222-556
               

               Cow position:
               chr11:35223007-35223359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               78, 46
               

               Conread position:
               226-517
               

               Cow position:
               chr11:39201350-39201651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               59, 198
               

               Conread position:
               261-525
               

               Cow position:
               chr11:457864-457583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               262-440
               

               Cow position:
               chr11:8860598-8860420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               42, 67
               

               Conread position:
               278-564
               

               Cow position:
               chr11:58770651-58770340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               26, 158
               

               Conread position:
               310-562
               

               Cow position:
               chr11:59060125-59059854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               559-778
               

               Cow position:
               chr11:38714925-38714716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               560-787
               

               Cow position:
               chr11:46108841-46108614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               22, 30
               

               Conread position:
               560-813
               

               Cow position:
               chr11:37296173-37296425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               159, 51
               

               Conread position:
               560-817
               

               Cow position:
               chr11:54468055-54467802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               159, 11
               

               Conread position:
               563-785
               

               Cow position:
               chr11:75060719-75060939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               52, 40
               

               Conread position:
               575-817
               

               Cow position:
               chr11:41022546-41022777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               588-813
               

               Cow position:
               chr11:18185345-18185121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 66
               

               Conread position:
               591-826
               

               Cow position:
               chr11:44170222-44170449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               126, 60
               

               Conread position:
               630-818
               

               Cow position:
               chr11:10449808-10449996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               89, 99
               

               Conread position:
               641-834
               

               Cow position:
               chr11:43992988-43993182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               166, 29
               

               Conread position:
               178-383
               

               Cow position:
               chr12:33384607-33384820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               146, 175
               

               Conread position:
               178-532
               

               Cow position:
               chr12:20340842-20340474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               123, 68
               

               Conread position:
               183-557
               

               Cow position:
               chr12:32960402-32960043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               259
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               7, 36
               

               Conread position:
               184-480
               

               Cow position:
               chr12:31102775-31103082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               117, 135
               

               Conread position:
               214-562
               

               Cow position:
               chr12:28417792-28417420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               262
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               87, 306
               

               Conread position:
               225-563
               

               Cow position:
               chr12:32454021-32453682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               79, 114
               

               Conread position:
               242-553
               

               Cow position:
               chr12:43238768-43239097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               64, 125
               

               Conread position:
               560-803
               

               Cow position:
               chr12:34368127-34368375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 165
               

               Conread position:
               560-818
               

               Cow position:
               chr12:34885861-34886116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               158, 24
               

               Conread position:
               562-817
               

               Cow position:
               chr12:7324234-7323978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               22, 27
               

               Conread position:
               564-817
               

               Cow position:
               chr12:32763126-32763371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               152, 50
               

               Conread position:
               617-819
               

               Cow position:
               chr12:26928165-26928366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               106, 41
               

               Conread position:
               175-365
               

               Cow position:
               chr13:1916873-1916672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               129, 11
               

               Conread position:
               176-544
               

               Cow position:
               chr13:17618403-17618801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 16
               

               Conread position:
               178-370
               

               Cow position:
               chr13:53198668-53198871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               125, 190
               

               Conread position:
               178-465
               

               Cow position:
               chr13:27235835-27236125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               123, 11
               

               Conread position:
               179-515
               

               Cow position:
               chr13:50582027-50581679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               247
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               176, 120
               

               Conread position:
               182-548
               

               Cow position:
               chr13:52393068-52393450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               9, 174
               

               Conread position:
               211-520
               

               Cow position:
               chr13:45060236-45060542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               92, 151
               

               Conread position:
               216-369
               

               Cow position:
               chr13:34804912-34804759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               87, 7
               

               Conread position:
               224-521
               

               Cow position:
               chr13:56899641-56899933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               79, 98
               

               Conread position:
               254-525
               

               Cow position:
               chr13:47682522-47682813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               559-807
               

               Cow position:
               chr13:60408279-60408041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               559-813
               

               Cow position:
               chr13:17350641-17350884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               160, 26
               

               Conread position:
               559-818
               

               Cow position:
               chr13:10330585-10330834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               150, 16
               

               Conread position:
               559-818
               

               Cow position:
               chr13:45645521-45645261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               55, 71
               

               Conread position:
               560-817
               

               Cow position:
               chr13:21439018-21438769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               159, 45
               

               Conread position:
               560-823
               

               Cow position:
               chr13:44630064-44629795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               73, 102
               

               Conread position:
               561-768
               

               Cow position:
               chr13:14234285-14234489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 55
               

               Conread position:
               562-817
               

               Cow position:
               chr13:9974381-9974641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               155, 61
               

               Conread position:
               563-816
               

               Cow position:
               chr13:53355206-53355447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               568-802
               

               Cow position:
               chr13:16518181-16518405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               154, 7
               

               Conread position:
               569-817
               

               Cow position:
               chr13:44061869-44061616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               569-824
               

               Cow position:
               chr13:34073380-34073633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               574-801
               

               Cow position:
               chr13:27396720-27396497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               86, 31
               

               Conread position:
               175-531
               

               Cow position:
               chr14:21025203-21025550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               12, 164
               

               Conread position:
               178-480
               

               Cow position:
               chr14:50343947-50344267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               123, 62
               

               Conread position:
               183-533
               

               Cow position:
               chr14:40829721-40830078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 29
               

               Conread position:
               189-450
               

               Cow position:
               chr14:16962186-16961914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               117, 34
               

               Conread position:
               195-457
               

               Cow position:
               chr14:3521576-3521320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               106, 144
               

               Conread position:
               213-527
               

               Cow position:
               chr14:49385554-49385229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               88, 169
               

               Conread position:
               216-521
               

               Cow position:
               chr14:13612006-13611701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               85, 221
               

               Conread position:
               223-556
               

               Cow position:
               chr14:28367693-28367361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               81, 44
               

               Conread position:
               560-801
               

               Cow position:
               chr14:41682499-41682238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               43, 141
               

               Conread position:
               560-817
               

               Cow position:
               chr14:42231326-42231576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               159, 23
               

               Conread position:
               562-813
               

               Cow position:
               chr14:19749318-19749066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               147, 43
               

               Conread position:
               566-813
               

               Cow position:
               chr14:20918803-20919039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               146, 39
               

               Conread position:
               568-817
               

               Cow position:
               chr14:6510809-6510573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               151, 45
               

               Conread position:
               579-816
               

               Cow position:
               chr14:17613681-17613445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               144, 26
               

               Conread position:
               175-550
               

               Cow position:
               chr15:33722287-33722679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 108
               

               Conread position:
               175-555
               

               Cow position:
               chr15:53312052-53311650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               286
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               182-562
               

               Cow position:
               chr15:27487347-27486918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               295
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               210-470
               

               Cow position:
               chr15:5187881-5188149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               93, 137
               

               Conread position:
               237-582
               

               Cow position:
               chr15:31173789-31174154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               65, 171
               

               Conread position:
               240-576
               

               Cow position:
               chr15:31161297-31161647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               63, 32
               

               Conread position:
               559-788
               

               Cow position:
               chr15:49482365-49482130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               559-817
               

               Cow position:
               chr15:24412524-24412777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               105, 46
               

               Conread position:
               559-817
               

               Cow position:
               chr15:28931484-28931236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               73, 46
               

               Conread position:
               560-775
               

               Cow position:
               chr15:16150995-16151210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               560-816
               

               Cow position:
               chr15:6635641-6635905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               561-780
               

               Cow position:
               chr15:45903067-45902854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               157, 38
               

               Conread position:
               561-796
               

               Cow position:
               chr15:46872097-46872325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               40, 59
               

               Conread position:
               561-812
               

               Cow position:
               chr15:11811576-11811827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               151, 13
               

               Conread position:
               561-813
               

               Cow position:
               chr15:24087686-24087435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               151, 44
               

               Conread position:
               562-823
               

               Cow position:
               chr15:26410926-26411181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               96, 43
               

               Conread position:
               579-817
               

               Cow position:
               chr15:583970-584203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               144, 30
               

               Conread position:
               592-817
               

               Cow position:
               chr15:20030784-20031007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               17, 65
               

               Conread position:
               673-795
               

               Cow position:
               chr15:8991498-8991373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               175-375
               

               Cow position:
               chr16:4897334-4897535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               128, 14
               

               Conread position:
               175-562
               

               Cow position:
               chr16:14749244-14748869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               271
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               150, 35
               

               Conread position:
               183-563
               

               Cow position:
               chr16:47851801-47852200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 24
               

               Conread position:
               189-562
               

               Cow position:
               chr16:10449237-10449628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 75
               

               Conread position:
               194-469
               

               Cow position:
               chr16:42131890-42131608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               141, 204
               

               Conread position:
               216-532
               

               Cow position:
               chr16:49026091-49026413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               117, 88
               

               Conread position:
               216-566
               

               Cow position:
               chr16:32791500-32791859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 181
               

               Conread position:
               228-566
               

               Cow position:
               chr16:13828701-13829035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               237
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               248, 107
               

               Conread position:
               272-550
               

               Cow position:
               chr16:28161097-28161391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               30, 115
               

               Conread position:
               300-559
               

               Cow position:
               chr16:44404869-44405147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               56, 250
               

               Conread position:
               300-559
               

               Cow position:
               chr16:44456447-44456722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               56, 247
               

               Conread position:
               390-556
               

               Cow position:
               chr16:53091233-53091416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               557-817
               

               Cow position:
               chr16:25123334-25123599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               48, 95
               

               Conread position:
               560-808
               

               Cow position:
               chr16:9484993-9485235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               144, 42
               

               Conread position:
               560-816
               

               Cow position:
               chr16:19280485-19280740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               48, 55
               

               Conread position:
               560-817
               

               Cow position:
               chr16:13725154-13725405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               562-812
               

               Cow position:
               chr16:9167145-9167393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               157, 43
               

               Conread position:
               562-813
               

               Cow position:
               chr16:14383421-14383672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               33, 44
               

               Conread position:
               563-826
               

               Cow position:
               chr16:1705982-1705722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               155, 40
               

               Conread position:
               565-817
               

               Cow position:
               chr16:33913598-33913356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               175-562
               

               Cow position:
               chr17:12445804-12446206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 94
               

               Conread position:
               178-341
               

               Cow position:
               chr17:36858308-36858140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               32, 37
               

               Conread position:
               191-553
               

               Cow position:
               chr17:28583662-28583279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               95, 81
               

               Conread position:
               241-501
               

               Cow position:
               chr17:195720-195441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               559-823
               

               Cow position:
               chr17:35966449-35966196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               258, 51
               

               Conread position:
               560-811
               

               Cow position:
               chr17:27112358-27112602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               159, 37
               

               Conread position:
               560-813
               

               Cow position:
               chr17:26716882-26716643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               560-826
               

               Cow position:
               chr17:1511091-1510830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               159, 29
               

               Conread position:
               561-803
               

               Cow position:
               chr17:35046875-35046642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               157, 26
               

               Conread position:
               562-817
               

               Cow position:
               chr17:26749543-26749794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               157, 51
               

               Conread position:
               615-817
               

               Cow position:
               chr17:21963473-21963672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               104, 71
               

               Conread position:
               662-813
               

               Cow position:
               chr17:39370745-39370894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               175-575
               

               Cow position:
               chr18:30722590-30723012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 11
               

               Conread position:
               178-374
               

               Cow position:
               chr18:48804449-48804239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               178-562
               

               Cow position:
               chr18:4506603-4506989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               27, 141
               

               Conread position:
               178-579
               

               Cow position:
               chr18:8336811-8336408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               279
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               139, 117
               

               Conread position:
               189-552
               

               Cow position:
               chr18:25817150-25817529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 161
               

               Conread position:
               195-550
               

               Cow position:
               chr18:13862297-13862668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 49
               

               Conread position:
               560-813
               

               Cow position:
               chr18:2512037-2511785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               152, 15
               

               Conread position:
               560-817
               

               Cow position:
               chr18:23039000-23038759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               224, 52
               

               Conread position:
               561-764
               

               Cow position:
               chr18:50027034-50027236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               157, 44
               

               Conread position:
               562-752
               

               Cow position:
               chr18:49641743-49641940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               98, 41
               

               Conread position:
               562-813
               

               Cow position:
               chr18:37870282-37870532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 51
               

               Conread position:
               564-803
               

               Cow position:
               chr18:1837155-1836919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               145, 54
               

               Conread position:
               566-816
               

               Cow position:
               chr18:27147944-27147696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               152, 39
               

               Conread position:
               575-804
               

               Cow position:
               chr18:35606258-35606033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               136, 38
               

               Conread position:
               593-767
               

               Cow position:
               chr18:41662865-41662690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               618-817
               

               Cow position:
               chr18:47962474-47962277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               9, 41
               

               Conread position:
               170-521
               

               Cow position:
               chr19:34459949-34459583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               131, 10
               

               Conread position:
               175-401
               

               Cow position:
               chr19:30209178-30208953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               94, 125
               

               Conread position:
               175-525
               

               Cow position:
               chr19:13460229-13460603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               61, 89
               

               Conread position:
               175-559
               

               Cow position:
               chr19:4369304-4368908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               275
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               125, 81
               

               Conread position:
               178-564
               

               Cow position:
               chr19:11346743-11347147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               123, 232
               

               Conread position:
               189-414
               

               Cow position:
               chr19:35105931-35106168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               560-810
               

               Cow position:
               chr19:13467063-13467314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               64, 43
               

               Conread position:
               560-817
               

               Cow position:
               chr19:10093809-10094062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               562-817
               

               Cow position:
               chr19:17985821-17985568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               41, 120
               

               Conread position:
               562-819
               

               Cow position:
               chr19:19038268-19038521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               157, 33
               

               Conread position:
               584-803
               

               Cow position:
               chr19:46645796-46645580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 19
               

               Conread position:
               595-813
               

               Cow position:
               chr19:25653406-25653616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               641-823
               

               Cow position:
               chr19:17790382-17790560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               77, 39
               

               Conread position:
               687-818
               

               Cow position:
               chr19:25883950-25883818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               175-532
               

               Cow position:
               chr2:70156220-70155844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               258
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               175-547
               

               Cow position:
               chr2:65620971-65620596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               278
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               129, 37
               

               Conread position:
               175-566
               

               Cow position:
               chr2:16817399-16817013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 62
               

               Conread position:
               186-559
               

               Cow position:
               chr2:13125828-13125435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               238-534
               

               Cow position:
               chr2:49856537-49856224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               66, 9
               

               Conread position:
               241-569
               

               Cow position:
               chr2:40591561-40591206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               83, 112
               

               Conread position:
               267-562
               

               Cow position:
               chr2:74252072-74251756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               15, 151
               

               Conread position:
               556-804
               

               Cow position:
               chr2:33316613-33316367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               5, 49
               

               Conread position:
               559-808
               

               Cow position:
               chr2:12192641-12192392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               66, 54
               

               Conread position:
               559-817
               

               Cow position:
               chr2:70615042-70615287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               160, 25
               

               Conread position:
               560-763
               

               Cow position:
               chr2:70146115-70146310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               560-808
               

               Cow position:
               chr2:22218916-22219163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               67, 45
               

               Conread position:
               560-810
               

               Cow position:
               chr2:14936276-14936024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               79, 63
               

               Conread position:
               560-812
               

               Cow position:
               chr2:50750453-50750703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               159, 54
               

               Conread position:
               560-818
               

               Cow position:
               chr2:23542156-23542401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               562-812
               

               Cow position:
               chr2:52044641-52044901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               562-817
               

               Cow position:
               chr2:26256459-26256707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               157, 73
               

               Conread position:
               563-813
               

               Cow position:
               chr2:29780495-29780737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               92, 21
               

               Conread position:
               567-817
               

               Cow position:
               chr2:18566881-18567126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               567-817
               

               Cow position:
               chr2:37746165-37746421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               89, 38
               

               Conread position:
               573-816
               

               Cow position:
               chr2:40708902-40708671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               146, 15
               

               Conread position:
               175-550
               

               Cow position:
               chr20:33667074-33666682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 230
               

               Conread position:
               178-592
               

               Cow position:
               chr20:17123065-17123483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               285
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               123, 49
               

               Conread position:
               189-559
               

               Cow position:
               chr20:4655881-4656265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 33
               

               Conread position:
               229-530
               

               Cow position:
               chr20:5389659-5389982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               75, 125
               

               Conread position:
               325-550
               

               Cow position:
               chr20:9376340-9376110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 78
               

               Conread position:
               559-824
               

               Cow position:
               chr20:36720943-36721198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               77, 45
               

               Conread position:
               562-710
               

               Cow position:
               chr20:13738421-13738273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               175-560
               

               Cow position:
               chr21:30786991-30786606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 92
               

               Conread position:
               178-449
               

               Cow position:
               chr21:5119184-5118906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               126, 75
               

               Conread position:
               178-529
               

               Cow position:
               chr21:32208846-32208508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               53, 31
               

               Conread position:
               179-532
               

               Cow position:
               chr21:34576922-34577293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 49
               

               Conread position:
               228-532
               

               Cow position:
               chr21:11516466-11516788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               46, 232
               

               Conread position:
               560-761
               

               Cow position:
               chr21:47844907-47844708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               51, 30
               

               Conread position:
               562-774
               

               Cow position:
               chr21:8943753-8943957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               157, 43
               

               Conread position:
               562-823
               

               Cow position:
               chr21:20320869-20321112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 21
               

               Conread position:
               563-823
               

               Cow position:
               chr21:14157756-14158019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               155, 11
               

               Conread position:
               563-824
               

               Cow position:
               chr21:32199208-32198946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               57, 42
               

               Conread position:
               576-822
               

               Cow position:
               chr21:30180411-30180168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               142, 34
               

               Conread position:
               604-817
               

               Cow position:
               chr21:35708751-35708540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               610-817
               

               Cow position:
               chr21:33106150-33105942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               7, 142
               

               Conread position:
               85-817
               

               Cow position:
               chr22:38129200-38128453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               758
               

               Alignm identity:
               574
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 78
               

               Conread position:
               228-440
               

               Cow position:
               chr22:17782853-17783075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               73, 185
               

               Conread position:
               554-813
               

               Cow position:
               chr22:19128314-19128064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               69, 49
               

               Conread position:
               559-813
               

               Cow position:
               chr22:47508940-47509200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 225
               

               Conread position:
               560-808
               

               Cow position:
               chr22:20948931-20949169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 15
               

               Conread position:
               560-811
               

               Cow position:
               chr22:19464450-19464199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 109
               

               Conread position:
               560-813
               

               Cow position:
               chr22:43351413-43351666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               41, 45
               

               Conread position:
               560-817
               

               Cow position:
               chr22:38364435-38364179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               103, 43
               

               Conread position:
               563-826
               

               Cow position:
               chr22:11682129-11681860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               24, 48
               

               Conread position:
               610-817
               

               Cow position:
               chr22:16280185-16280392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               78, 12
               

               Conread position:
               178-369
               

               Cow position:
               chr23:19817004-19817199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               178-556
               

               Cow position:
               chr23:35672246-35672632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               34, 183
               

               Conread position:
               191-556
               

               Cow position:
               chr23:24533554-24533191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               85, 37
               

               Conread position:
               216-562
               

               Cow position:
               chr23:36335093-36335461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               59, 51
               

               Conread position:
               560-809
               

               Cow position:
               chr23:38247158-38247415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               38, 128
               

               Conread position:
               561-817
               

               Cow position:
               chr23:38447183-38447438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               157, 27
               

               Conread position:
               561-817
               

               Cow position:
               chr23:40669488-40669740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               158, 17
               

               Conread position:
               561-826
               

               Cow position:
               chr23:20792498-20792758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               158, 13
               

               Conread position:
               562-816
               

               Cow position:
               chr23:21925416-21925164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               156, 50
               

               Conread position:
               563-817
               

               Cow position:
               chr23:10451306-10451050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               155, 50
               

               Conread position:
               564-822
               

               Cow position:
               chr23:37323047-37323297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               60, 39
               

               Conread position:
               595-795
               

               Cow position:
               chr23:19871483-19871682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               175-547
               

               Cow position:
               chr24:22719218-22718820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 34
               

               Conread position:
               175-569
               

               Cow position:
               chr24:9837641-9838056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 242
               

               Conread position:
               175-571
               

               Cow position:
               chr24:16135952-16135543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 17
               

               Conread position:
               183-539
               

               Cow position:
               chr24:10552478-10552858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               121, 78
               

               Conread position:
               191-556
               

               Cow position:
               chr24:12432834-12432464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 115
               

               Conread position:
               227-494
               

               Cow position:
               chr24:16308160-16307885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               76, 37
               

               Conread position:
               559-734
               

               Cow position:
               chr24:4622400-4622226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               155, 45
               

               Conread position:
               564-823
               

               Cow position:
               chr24:25570220-25570478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               253, 49
               

               Conread position:
               577-823
               

               Cow position:
               chr24:36233228-36233474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               614-802
               

               Cow position:
               chr24:37174072-37174258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               104, 77
               

               Conread position:
               687-817
               

               Cow position:
               chr24:5541610-5541741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 93
               

               Conread position:
               175-546
               

               Cow position:
               chr25:24501623-24501997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 172
               

               Conread position:
               178-360
               

               Cow position:
               chr25:17005349-17005539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 47
               

               Conread position:
               178-369
               

               Cow position:
               chr25:21346836-21347039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               12, 6
               

               Conread position:
               182-365
               

               Cow position:
               chr25:33651186-33650990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               8, 43
               

               Conread position:
               186-562
               

               Cow position:
               chr25:27029883-27029495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               258
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               116, 103
               

               Conread position:
               216-480
               

               Cow position:
               chr25:22741702-22741417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               21, 164
               

               Conread position:
               225-555
               

               Cow position:
               chr25:4042484-4042157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               227, 75
               

               Conread position:
               559-817
               

               Cow position:
               chr25:21746360-21746620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               120, 12
               

               Conread position:
               560-761
               

               Cow position:
               chr25:19144706-19144906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               161, 43
               

               Conread position:
               561-817
               

               Cow position:
               chr25:34855257-34855001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               162, 91
               

               Conread position:
               573-817
               

               Cow position:
               chr25:35340578-35340821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               165, 32
               

               Conread position:
               175-562
               

               Cow position:
               chr26:12929542-12929156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 131
               

               Conread position:
               183-373
               

               Cow position:
               chr26:26276144-26275953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               7, 179
               

               Conread position:
               189-502
               

               Cow position:
               chr26:5709197-5709510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               125, 77
               

               Conread position:
               218-449
               

               Cow position:
               chr26:14454545-14454785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               86, 49
               

               Conread position:
               228-558
               

               Cow position:
               chr26:32676171-32675813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               73, 126
               

               Conread position:
               564-817
               

               Cow position:
               chr26:27415071-27415314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               216-550
               

               Cow position:
               chr27:11824959-11824617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               85, 110
               

               Conread position:
               229-547
               

               Cow position:
               chr27:29268996-29268659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               71, 111
               

               Conread position:
               561-817
               

               Cow position:
               chr27:11606855-11607111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               157, 52
               

               Conread position:
               562-817
               

               Cow position:
               chr27:4874709-4874463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               48, 57
               

               Conread position:
               563-787
               

               Cow position:
               chr27:22494380-22494605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               42, 112
               

               Conread position:
               610-795
               

               Cow position:
               chr27:13595139-13594955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               113, 63
               

               Conread position:
               164-554
               

               Cow position:
               chr28:23748132-23748531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               26, 52
               

               Conread position:
               175-402
               

               Cow position:
               chr28:19881050-19880814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               129, 89
               

               Conread position:
               175-531
               

               Cow position:
               chr28:13320307-13319948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               242
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               104, 35
               

               Conread position:
               178-562
               

               Cow position:
               chr28:20567197-20567598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               279
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               123, 179
               

               Conread position:
               196-565
               

               Cow position:
               chr28:27362893-27362506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 81
               

               Conread position:
               210-562
               

               Cow position:
               chr28:24606747-24606365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               94, 194
               

               Conread position:
               272-480
               

               Cow position:
               chr28:19281722-19281508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               32, 77
               

               Conread position:
               285-562
               

               Cow position:
               chr28:8401714-8401418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               21, 107
               

               Conread position:
               325-630
               

               Cow position:
               chr28:20694797-20694477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               112, 19
               

               Conread position:
               553-826
               

               Cow position:
               chr28:22817643-22817914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 9
               

               Conread position:
               560-793
               

               Cow position:
               chr28:16385709-16385490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               158, 50
               

               Conread position:
               562-817
               

               Cow position:
               chr28:24321352-24321099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               91, 24
               

               Conread position:
               566-813
               

               Cow position:
               chr28:19530592-19530349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               152, 39
               

               Conread position:
               574-814
               

               Cow position:
               chr28:34344451-34344210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               37, 41
               

               Conread position:
               594-795
               

               Cow position:
               chr28:13955249-13955049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               76, 11
               

               Conread position:
               175-564
               

               Cow position:
               chr29:14814380-14814773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               262
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               127, 66
               

               Conread position:
               560-813
               

               Cow position:
               chr29:20643028-20643277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               159, 14
               

               Conread position:
               560-816
               

               Cow position:
               chr29:12669932-12670176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               253, 43
               

               Conread position:
               573-823
               

               Cow position:
               chr29:33106327-33106084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               144, 44
               

               Conread position:
               605-813
               

               Cow position:
               chr29:37776970-37776758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               68, 18
               

               Conread position:
               175-502
               

               Cow position:
               chr3:16133071-16132727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               105, 17
               

               Conread position:
               175-562
               

               Cow position:
               chr3:66616999-66616585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 274
               

               Conread position:
               178-371
               

               Cow position:
               chr3:20916012-20915806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               178-418
               

               Cow position:
               chr3:21940955-21941191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               178-532
               

               Cow position:
               chr3:14928015-14928376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               124, 97
               

               Conread position:
               178-562
               

               Cow position:
               chr3:49356170-49356564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 161
               

               Conread position:
               183-435
               

               Cow position:
               chr3:27371389-27371653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               7, 36
               

               Conread position:
               184-384
               

               Cow position:
               chr3:3516640-3516847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               184-527
               

               Cow position:
               chr3:67656128-67655759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               184-569
               

               Cow position:
               chr3:42471247-42471639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               273
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               119, 44
               

               Conread position:
               189-491
               

               Cow position:
               chr3:64159400-64159090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               114, 42
               

               Conread position:
               189-534
               

               Cow position:
               chr3:33631220-33630849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               115, 32
               

               Conread position:
               189-562
               

               Cow position:
               chr3:46931211-46931598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               189-562
               

               Cow position:
               chr3:55993005-55992615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 25
               

               Conread position:
               189-563
               

               Cow position:
               chr3:25167637-25167255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 278
               

               Conread position:
               228-571
               

               Cow position:
               chr3:42567321-42567675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 97
               

               Conread position:
               234-564
               

               Cow position:
               chr3:71249358-71249023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               72, 194
               

               Conread position:
               335-563
               

               Cow position:
               chr3:48371417-48371646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               557-817
               

               Cow position:
               chr3:46731120-46730859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               133, 48
               

               Conread position:
               560-816
               

               Cow position:
               chr3:18880717-18880461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               113, 44
               

               Conread position:
               560-816
               

               Cow position:
               chr3:56608977-56608731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               560-816
               

               Cow position:
               chr3:57987118-57987374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               61, 45
               

               Conread position:
               562-809
               

               Cow position:
               chr3:48811801-48812044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               161, 48
               

               Conread position:
               566-818
               

               Cow position:
               chr3:67480538-67480285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               37, 80
               

               Conread position:
               570-778
               

               Cow position:
               chr3:81481399-81481606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 45
               

               Conread position:
               614-810
               

               Cow position:
               chr3:44506859-44507058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               617-804
               

               Cow position:
               chr3:33753236-33753423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               103, 12
               

               Conread position:
               675-823
               

               Cow position:
               chr3:31367247-31367395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               175-400
               

               Cow position:
               chr4:45906132-45906365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               129, 45
               

               Conread position:
               175-480
               

               Cow position:
               chr4:3925519-3925850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               126, 190
               

               Conread position:
               178-368
               

               Cow position:
               chr4:41093202-41093002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               178-419
               

               Cow position:
               chr4:21037989-21038234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               147, 29
               

               Conread position:
               178-562
               

               Cow position:
               chr4:50207913-50207531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 181
               

               Conread position:
               184-563
               

               Cow position:
               chr4:47715910-47715544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 20
               

               Conread position:
               189-565
               

               Cow position:
               chr4:40669800-40670195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               277
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               114, 167
               

               Conread position:
               190-562
               

               Cow position:
               chr4:40411513-40411135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               111, 144
               

               Conread position:
               194-555
               

               Cow position:
               chr4:48994627-48994994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               54, 18
               

               Conread position:
               220-512
               

               Cow position:
               chr4:43889489-43889184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               81, 98
               

               Conread position:
               228-559
               

               Cow position:
               chr4:29264363-29264000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               75, 192
               

               Conread position:
               228-563
               

               Cow position:
               chr4:39519440-39519090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               76, 9
               

               Conread position:
               273-575
               

               Cow position:
               chr4:42559205-42558883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               8, 105
               

               Conread position:
               559-816
               

               Cow position:
               chr4:841634-841387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               160, 46
               

               Conread position:
               560-817
               

               Cow position:
               chr4:20072134-20072398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               562-812
               

               Cow position:
               chr4:52222038-52222283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               155, 43
               

               Conread position:
               564-796
               

               Cow position:
               chr4:47338998-47338764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               113, 46
               

               Conread position:
               564-827
               

               Cow position:
               chr4:38522683-38522423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               66, 49
               

               Conread position:
               573-828
               

               Cow position:
               chr4:36346408-36346155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               144, 78
               

               Conread position:
               605-826
               

               Cow position:
               chr4:38468213-38468438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               93, 8
               

               Conread position:
               606-824
               

               Cow position:
               chr4:32981666-32981885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               90, 107
               

               Conread position:
               607-811
               

               Cow position:
               chr4:34632502-34632707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               110, 16
               

               Conread position:
               613-813
               

               Cow position:
               chr4:55310051-55309853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               105, 10
               

               Conread position:
               178-528
               

               Cow position:
               chr5:30010111-30010463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               157, 112
               

               Conread position:
               178-559
               

               Cow position:
               chr5:38776399-38775987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               58, 345
               

               Conread position:
               178-559
               

               Cow position:
               chr5:46546441-46546050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               270
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               13, 93
               

               Conread position:
               178-564
               

               Cow position:
               chr5:75711763-75711356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 230
               

               Conread position:
               183-532
               

               Cow position:
               chr5:23724842-23724477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               23, 41
               

               Conread position:
               183-532
               

               Cow position:
               chr5:52773382-52773013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 218
               

               Conread position:
               184-562
               

               Cow position:
               chr5:38155095-38154725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               218-450
               

               Cow position:
               chr5:32237606-32237850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               117, 66
               

               Conread position:
               223-517
               

               Cow position:
               chr5:35502075-35501750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               81, 228
               

               Conread position:
               228-477
               

               Cow position:
               chr5:52118874-52118612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               73, 161
               

               Conread position:
               228-562
               

               Cow position:
               chr5:36182177-36182492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               110, 17
               

               Conread position:
               237-562
               

               Cow position:
               chr5:9677093-9677434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               66, 139
               

               Conread position:
               557-816
               

               Cow position:
               chr5:52644364-52644105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               557-830
               

               Cow position:
               chr5:37266619-37266348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 48
               

               Conread position:
               558-716
               

               Cow position:
               chr5:35641637-35641481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               101, 45
               

               Conread position:
               560-804
               

               Cow position:
               chr5:72043965-72043726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               560-817
               

               Cow position:
               chr5:18469318-18469071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               224, 43
               

               Conread position:
               560-823
               

               Cow position:
               chr5:21638045-21637790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               163, 53
               

               Conread position:
               561-823
               

               Cow position:
               chr5:38373443-38373180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               250, 57
               

               Conread position:
               562-749
               

               Cow position:
               chr5:4139862-4140048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               154, 39
               

               Conread position:
               563-818
               

               Cow position:
               chr5:25402773-25402520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               48, 58
               

               Conread position:
               597-817
               

               Cow position:
               chr5:40886757-40886973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               122, 21
               

               Conread position:
               175-480
               

               Cow position:
               chr6:34836450-34836754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               175-556
               

               Cow position:
               chr6:36269696-36270084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 12
               

               Conread position:
               175-562
               

               Cow position:
               chr6:17451752-17452148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               279
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               31, 40
               

               Conread position:
               178-416
               

               Cow position:
               chr6:39796438-39796189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               178-450
               

               Cow position:
               chr6:26375754-26376037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               66, 231
               

               Conread position:
               189-547
               

               Cow position:
               chr6:33798741-33798375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 161
               

               Conread position:
               194-559
               

               Cow position:
               chr6:854295-854676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 172
               

               Conread position:
               210-413
               

               Cow position:
               chr6:55266520-55266734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 127
               

               Conread position:
               216-562
               

               Cow position:
               chr6:50464547-50464189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               257
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               87, 122
               

               Conread position:
               228-556
               

               Cow position:
               chr6:6354299-6353950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               254
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               75, 11
               

               Conread position:
               389-556
               

               Cow position:
               chr6:2164994-2165171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               560-809
               

               Cow position:
               chr6:22809960-22809712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               159, 53
               

               Conread position:
               560-810
               

               Cow position:
               chr6:24272774-24272522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               45, 17
               

               Conread position:
               560-817
               

               Cow position:
               chr6:20603245-20602989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 50
               

               Conread position:
               561-759
               

               Cow position:
               chr6:1629460-1629256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               562-816
               

               Cow position:
               chr6:51337901-51338152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               27, 44
               

               Conread position:
               562-817
               

               Cow position:
               chr6:18350987-18350736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               158, 43
               

               Conread position:
               614-816
               

               Cow position:
               chr6:4652610-4652401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               175-358
               

               Cow position:
               chr7:50459430-50459235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               175-553
               

               Cow position:
               chr7:42090387-42090756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               153, 17
               

               Conread position:
               175-556
               

               Cow position:
               chr7:59088148-59087746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               178-480
               

               Cow position:
               chr7:183085-183404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               31, 205
               

               Conread position:
               178-559
               

               Cow position:
               chr7:46493723-46493330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 21
               

               Conread position:
               179-567
               

               Cow position:
               chr7:61548693-61549101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 38
               

               Conread position:
               182-534
               

               Cow position:
               chr7:4910387-4910011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 112
               

               Conread position:
               199-547
               

               Cow position:
               chr7:65625877-65626227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               249
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               54, 69
               

               Conread position:
               380-576
               

               Cow position:
               chr7:35010546-35010340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 202
               

               Conread position:
               554-817
               

               Cow position:
               chr7:60457430-60457690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               561-813
               

               Cow position:
               chr7:21652159-21652410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               128, 43
               

               Conread position:
               562-756
               

               Cow position:
               chr7:3780718-3780907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               152, 43
               

               Conread position:
               565-823
               

               Cow position:
               chr7:35504258-35504526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               61, 107
               

               Conread position:
               568-817
               

               Cow position:
               chr7:642743-642494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               118, 25
               

               Conread position:
               568-817
               

               Cow position:
               chr7:8831313-8831558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               151, 37
               

               Conread position:
               573-817
               

               Cow position:
               chr7:53428556-53428798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               146, 15
               

               Conread position:
               575-817
               

               Cow position:
               chr7:50686143-50685902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               112, 39
               

               Conread position:
               599-795
               

               Cow position:
               chr7:4914828-4915024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               136, 60
               

               Conread position:
               614-817
               

               Cow position:
               chr7:20157357-20157558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               175-463
               

               Cow position:
               chr8:14637799-14638100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               128, 190
               

               Conread position:
               175-505
               

               Cow position:
               chr8:5419721-5420057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               129, 179
               

               Conread position:
               175-575
               

               Cow position:
               chr8:46505548-46505119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               304
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               178-378
               

               Cow position:
               chr8:30148265-30148052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               43, 98
               

               Conread position:
               178-552
               

               Cow position:
               chr8:49950622-49950226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 43
               

               Conread position:
               182-528
               

               Cow position:
               chr8:46620665-46620316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               255
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               8, 138
               

               Conread position:
               190-562
               

               Cow position:
               chr8:57262564-57262190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               257
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               112, 81
               

               Conread position:
               216-562
               

               Cow position:
               chr8:11045653-11045288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 150
               

               Conread position:
               223-556
               

               Cow position:
               chr8:26220606-26220252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 176
               

               Conread position:
               559-794
               

               Cow position:
               chr8:18019294-18019060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               164, 13
               

               Conread position:
               560-717
               

               Cow position:
               chr8:6298373-6298219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               560-814
               

               Cow position:
               chr8:41617498-41617248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               163, 53
               

               Conread position:
               560-817
               

               Cow position:
               chr8:45875311-45875553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               560-817
               

               Cow position:
               chr8:45921893-45922135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               560-823
               

               Cow position:
               chr8:47418096-47417841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               52, 64
               

               Conread position:
               561-818
               

               Cow position:
               chr8:42312370-42312625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               157, 43
               

               Conread position:
               563-812
               

               Cow position:
               chr8:24432613-24432362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               45, 25
               

               Conread position:
               573-812
               

               Cow position:
               chr8:11737863-11737628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               145, 40
               

               Conread position:
               597-777
               

               Cow position:
               chr8:4640805-4640622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               608-801
               

               Cow position:
               chr8:45930616-45930801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               110, 10
               

               Conread position:
               625-812
               

               Cow position:
               chr8:43262426-43262235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               175-531
               

               Cow position:
               chr9:58494144-58493777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               249
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               29, 42
               

               Conread position:
               178-450
               

               Cow position:
               chr9:17011496-17011226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               123, 197
               

               Conread position:
               178-531
               

               Cow position:
               chr9:58587457-58587832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               126, 215
               

               Conread position:
               178-553
               

               Cow position:
               chr9:3475970-3475578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               126, 104
               

               Conread position:
               178-556
               

               Cow position:
               chr9:17557896-17558289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 96
               

               Conread position:
               178-562
               

               Cow position:
               chr9:44342355-44341950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               184-554
               

               Cow position:
               chr9:21644410-21644026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 179
               

               Conread position:
               223-517
               

               Cow position:
               chr9:41246547-41246837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               78, 116
               

               Conread position:
               325-567
               

               Cow position:
               chr9:36851960-36852210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               111, 18
               

               Conread position:
               556-790
               

               Cow position:
               chr9:52462892-52462662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               5, 57
               

               Conread position:
               557-817
               

               Cow position:
               chr9:30724492-30724237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               162, 7
               

               Conread position:
               560-755
               

               Cow position:
               chr9:42966157-42965964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               561-817
               

               Cow position:
               chr9:22836047-22835795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 42
               

               Conread position:
               563-816
               

               Cow position:
               chr9:36351974-36351722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               155, 50
               

               Conread position:
               574-813
               

               Cow position:
               chr9:44851992-44852222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               122, 31
               

               Conread position:
               584-816
               

               Cow position:
               chr9:32503610-32503844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               36, 73
               

               Conread position:
               175-556
               

               Cow position:
               chrX:21571570-21571167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 92
               

               Conread position:
               175-561
               

               Cow position:
               chrX:7314547-7314163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               42, 33
               

               Conread position:
               178-532
               

               Cow position:
               chrX:17027055-17026690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               256
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               121, 69
               

               Conread position:
               178-559
               

               Cow position:
               chrX:7130298-7129911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               273
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               97, 23
               

               Conread position:
               178-564
               

               Cow position:
               chrX:33883642-33884043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 42
               

               Conread position:
               217-532
               

               Cow position:
               chrX:40802471-40802802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               89, 61
               

               Conread position:
               218-553
               

               Cow position:
               chrX:43640741-43641108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               85, 150
               

               Conread position:
               230-539
               

               Cow position:
               chrX:41100111-41099781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               77, 124
               

               Conread position:
               560-817
               

               Cow position:
               chrX:38183075-38182821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               158, 95
               

               Conread position:
               560-817
               

               Cow position:
               chrX:40074333-40074080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               614-826
               

               Cow position:
               chrX:22873761-22873969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               168, 89
               

               Conread position:
               636-827
               

               Cow position:
               chrX:34276269-34276077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               83, 172
               

               Conread position:
               662-818
               

               Cow position:
               chrX:39728075-39727920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 118
Conread position:	175-563
Cow position:	chr10:608954-609340 (view UCSC Genome Browser custom track)
Alignm length:	396
Alignm identity:	275
Alignm E-value:	0
Alignm gaps (pig, cow):	126, 143
Conread position:	189-559
Cow position:	chr10:15076255-15076637 (view UCSC Genome Browser custom track)
Alignm length:	388
Alignm identity:	272
Alignm E-value:	0
Alignm gaps (pig, cow):	112, 24
Conread position:	230-545
Cow position:	chr10:24616798-24616464 (view UCSC Genome Browser custom track)
Alignm length:	337
Alignm identity:	235
Alignm E-value:	4e-38
Alignm gaps (pig, cow):	76, 131
Conread position:	254-450
Cow position:	chr10:67406821-67406625 (view UCSC Genome Browser custom track)
Alignm length:	200
Alignm identity:	141
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	50, 13
Conread position:	290-559
Cow position:	chr10:61619305-61619590 (view UCSC Genome Browser custom track)
Alignm length:	289
Alignm identity:	214
Alignm E-value:	6.00036e-42
Alignm gaps (pig, cow):	12, 231
Conread position:	325-480
Cow position:	chr10:37648493-37648652 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	120
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	55, 78
Conread position:	557-802
Cow position:	chr10:2324331-2324574 (view UCSC Genome Browser custom track)
Alignm length:	248
Alignm identity:	168
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	24, 50
Conread position:	559-817
Cow position:	chr10:38300919-38301179 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	189
Alignm E-value:	1e-36
Alignm gaps (pig, cow):	159, 46
Conread position:	560-805
Cow position:	chr10:36473759-36474007 (view UCSC Genome Browser custom track)
Alignm length:	256
Alignm identity:	181
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	51, 126
Conread position:	560-814
Cow position:	chr10:12988919-12989166 (view UCSC Genome Browser custom track)
Alignm length:	258
Alignm identity:	178
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	90, 53
Conread position:	562-787
Cow position:	chr10:17189468-17189694 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	160
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	100, 82
Conread position:	564-817
Cow position:	chr10:51854965-51855210 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	172
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	102, 50
Conread position:	565-759
Cow position:	chr10:59281275-59281080 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	140
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	142, 40
Conread position:	565-817
Cow position:	chr10:8500172-8500408 (view UCSC Genome Browser custom track)
Alignm length:	254
Alignm identity:	185
Alignm E-value:	6e-32
Alignm gaps (pig, cow):	153, 40
Conread position:	566-817
Cow position:	chr10:10029904-10029656 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	176
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	117, 47
Conread position:	568-826
Cow position:	chr10:31623830-31624086 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	184
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	33, 20
Conread position:	573-813
Cow position:	chr10:58995227-58995464 (view UCSC Genome Browser custom track)
Alignm length:	244
Alignm identity:	176
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	49, 32
Conread position:	605-823
Cow position:	chr10:19247954-19248172 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	155
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	118, 54
Conread position:	681-817
Cow position:	chr10:59030461-59030325 (view UCSC Genome Browser custom track)
Alignm length:	137
Alignm identity:	101
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	175-374
Cow position:	chr11:41461660-41461449 (view UCSC Genome Browser custom track)
Alignm length:	212
Alignm identity:	162
Alignm E-value:	4e-37
Alignm gaps (pig, cow):	126, 0