Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8041L15.3 |
| Conread position: | 86-554 |
| Cow position: | chr1:62769066-62768624 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 114-489 |
| Cow position: | chr1:93018200-93018576 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 540-636 |
| Cow position: | chr1:62768390-62768295 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 377-636 |
| Cow position: | chr10:16293767-16294021 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 114-636 |
| Cow position: | chr13:33341280-33340772 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 167-636 |
| Cow position: | chr13:34973170-34972701 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 122 |
| Conread position: | 114-636 |
| Cow position: | chr2:76342817-76342293 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 375, 73 |
| Conread position: | 127-636 |
| Cow position: | chr2:84257825-84257316 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 130 |
| Conread position: | 160-555 |
| Cow position: | chr2:5916227-5916613 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 114-636 |
| Cow position: | chr21:39567440-39566919 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 219 |
| Conread position: | 130-312 |
| Cow position: | chr21:47466040-47466221 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 65, 60 |
| Conread position: | 114-636 |
| Cow position: | chr23:9542361-9541839 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 114-636 |
| Cow position: | chr25:2045073-2044551 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 111-374 |
| Cow position: | chr3:187774-187509 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 198 |
| Conread position: | 114-636 |
| Cow position: | chr3:42725970-42726477 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 114-636 |
| Cow position: | chr3:44434943-44435452 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 144-636 |
| Cow position: | chr3:28699270-28699755 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 393, 0 |
| Conread position: | 199-636 |
| Cow position: | chr4:25799649-25800076 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 283 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 71, 98 |
| Conread position: | 256-635 |
| Cow position: | chr4:49740476-49740097 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 375-533 |
| Cow position: | chr4:5267622-5267770 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 68 |
| Conread position: | 114-636 |
| Cow position: | chr5:52103961-52103443 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 22 |
| Conread position: | 215-374 |
| Cow position: | chr5:16535915-16535756 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 374-584 |
| Cow position: | chr5:16535619-16535409 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 117-635 |
| Cow position: | chr7:14408487-14409004 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 10 |
| Conread position: | 118-635 |
| Cow position: | chr7:14433501-14434018 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 118-636 |
| Cow position: | chr7:27793630-27793115 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 72 |
| Conread position: | 131-636 |
| Cow position: | chr7:11454860-11455365 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 59 |
| Conread position: | 142-378 |
| Cow position: | chr7:49104281-49104516 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 125 |
| Conread position: | 142-635 |
| Cow position: | chr7:11575112-11574627 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 48 |
| Conread position: | 114-626 |
| Cow position: | chr8:40436586-40436081 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 193-625 |
| Cow position: | chr8:53118785-53118355 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 102 |
| Conread position: | 114-635 |
| Cow position: | chr9:20570091-20570608 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 229-636 |
| Cow position: | chr9:57166600-57166202 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 116-481 |
| Cow position: | chrX:38795032-38795394 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |