Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042N04.3 |
| Conread position: | 553-669 |
| Cow position: | chr1:8985896-8986011 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 56 |
| Conread position: | 556-669 |
| Cow position: | chr1:49802808-49802693 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 570-670 |
| Cow position: | chr1:5415327-5415227 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-669 |
| Cow position: | chr13:18814926-18815039 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-669 |
| Cow position: | chr14:48819860-48819746 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 53 |
| Conread position: | 548-669 |
| Cow position: | chr15:36466062-36466182 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 556-669 |
| Cow position: | chr15:42892490-42892377 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-669 |
| Cow position: | chr15:46014241-46014128 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 558-673 |
| Cow position: | chr15:42892484-42892368 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 557-669 |
| Cow position: | chr18:36159481-36159593 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-674 |
| Cow position: | chr20:6001656-6001539 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 560-669 |
| Cow position: | chr23:25878908-25879015 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 568-672 |
| Cow position: | chr23:25879001-25878897 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 84 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-669 |
| Cow position: | chr26:7531077-7530967 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 569-717 |
| Cow position: | chr28:15061625-15061480 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 559-669 |
| Cow position: | chr3:43619138-43619027 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 18, 22 |
| Conread position: | 554-669 |
| Cow position: | chr4:15638146-15638265 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 556-669 |
| Cow position: | chr4:15638156-15638271 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 562-676 |
| Cow position: | chr4:18564641-18564754 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 109, 19 |
| Conread position: | 7-605 |
| Cow position: | chr5:40941238-40940641 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 444, 91 |
| Conread position: | 556-669 |
| Cow position: | chr6:15038292-15038405 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-669 |
| Cow position: | chr6:15038294-15038407 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-669 |
| Cow position: | chr6:15038296-15038409 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-669 |
| Cow position: | chr6:15038298-15038411 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-669 |
| Cow position: | chr6:15038455-15038342 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-669 |
| Cow position: | chr6:15038457-15038344 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-669 |
| Cow position: | chr6:15038459-15038346 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-669 |
| Cow position: | chr6:15038461-15038348 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-669 |
| Cow position: | chr6:15038463-15038350 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-669 |
| Cow position: | chr6:65904134-65904021 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-669 |
| Cow position: | chr6:45899087-45898975 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-670 |
| Cow position: | chr6:43193648-43193756 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 559-669 |
| Cow position: | chr6:15038448-15038340 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 563-669 |
| Cow position: | chr6:65835841-65835737 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 562-669 |
| Cow position: | chr7:47543500-47543607 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-669 |
| Cow position: | chr8:7192235-7192348 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-669 |
| Cow position: | chr8:7192237-7192350 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-669 |
| Cow position: | chr8:7192239-7192352 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 507-669 |
| Cow position: | chr9:35598486-35598324 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 560-672 |
| Cow position: | chrX:6639787-6639897 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 49 |