Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8043D06.5 |
| Conread position: | 361-505 |
| Cow position: | chr10:49623323-49623183 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 390-506 |
| Cow position: | chr10:12158695-12158809 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 507-675 |
| Cow position: | chr10:8729367-8729194 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 396-689 |
| Cow position: | chr11:6373863-6373553 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 110, 44 |
| Conread position: | 409-670 |
| Cow position: | chr12:14736724-14736453 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 96, 27 |
| Conread position: | 385-667 |
| Cow position: | chr13:15402627-15402338 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 52 |
| Conread position: | 390-683 |
| Cow position: | chr13:44222726-44223010 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 124, 48 |
| Conread position: | 399-675 |
| Cow position: | chr13:41654821-41654549 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 183, 41 |
| Conread position: | 412-676 |
| Cow position: | chr13:35009061-35008796 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 30 |
| Conread position: | 501-676 |
| Cow position: | chr13:30080855-30081032 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 10, 45 |
| Conread position: | 512-676 |
| Cow position: | chr13:33621168-33621006 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 87, 23 |
| Conread position: | 390-666 |
| Cow position: | chr16:46497072-46497354 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 129, 46 |
| Conread position: | 391-675 |
| Cow position: | chr16:35255224-35255507 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 104, 46 |
| Conread position: | 458-676 |
| Cow position: | chr17:29919492-29919710 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 501-676 |
| Cow position: | chr17:42349098-42349275 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 389-670 |
| Cow position: | chr18:6021244-6021530 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 115, 40 |
| Conread position: | 367-666 |
| Cow position: | chr19:5668432-5668127 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 376-632 |
| Cow position: | chr2:86048723-86048980 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 102, 60 |
| Conread position: | 501-676 |
| Cow position: | chr2:77369978-77369800 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 512-667 |
| Cow position: | chr2:82472397-82472547 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 23 |
| Conread position: | 512-676 |
| Cow position: | chr2:59539363-59539201 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 23 |
| Conread position: | 136-502 |
| Cow position: | chr21:1214708-1215080 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 6 |
| Conread position: | 390-665 |
| Cow position: | chr21:17869397-17869672 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 115, 50 |
| Conread position: | 501-798 |
| Cow position: | chr21:1215104-1215400 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 134 |
| Conread position: | 894-1123 |
| Cow position: | chr21:1211546-1211775 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 168 |
| Conread position: | 404-676 |
| Cow position: | chr23:8257549-8257277 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 101, 36 |
| Conread position: | 482-703 |
| Cow position: | chr23:281761-281545 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 538-686 |
| Cow position: | chr24:24455660-24455506 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 140 |
| Conread position: | 394-675 |
| Cow position: | chr25:35036790-35037068 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 110, 46 |
| Conread position: | 395-676 |
| Cow position: | chr26:32103779-32103494 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 34 |
| Conread position: | 501-710 |
| Cow position: | chr27:15761116-15761325 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 513-670 |
| Cow position: | chr27:15509452-15509287 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 501-676 |
| Cow position: | chr28:33769234-33769053 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 513-689 |
| Cow position: | chr28:4186317-4186145 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 86, 22 |
| Conread position: | 514-670 |
| Cow position: | chr28:19190283-19190129 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 81, 16 |
| Conread position: | 383-676 |
| Cow position: | chr29:36300014-36299725 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 118, 53 |
| Conread position: | 385-666 |
| Cow position: | chr3:77624445-77624157 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 501-673 |
| Cow position: | chr4:43070701-43070527 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 537-687 |
| Cow position: | chr5:22757002-22756850 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 137 |
| Conread position: | 369-675 |
| Cow position: | chr6:41216561-41216240 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 130, 71 |
| Conread position: | 390-667 |
| Cow position: | chr6:37392583-37392862 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 50 |
| Conread position: | 468-676 |
| Cow position: | chr7:36832005-36831784 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 88 |
| Conread position: | 501-696 |
| Cow position: | chr7:8837139-8836945 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 77, 23 |
| Conread position: | 384-667 |
| Cow position: | chr8:36952440-36952721 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 200, 56 |
| Conread position: | 552-675 |
| Cow position: | chrX:20859681-20859553 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 0 |