Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8043E11.3 |
| Conread position: | 1195-1388 |
| Cow position: | chr10:59571884-59572080 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 1238-1365 |
| Cow position: | chr10:60697601-60697468 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1239-1390 |
| Cow position: | chr10:31362187-31362030 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1240-1367 |
| Cow position: | chr10:1978644-1978509 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1240-1367 |
| Cow position: | chr10:6384558-6384688 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1240-1381 |
| Cow position: | chr10:61509916-61509768 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1240-1392 |
| Cow position: | chr10:30224711-30224861 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 129, 22 |
| Conread position: | 1242-1383 |
| Cow position: | chr10:7089376-7089521 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 40, 49 |
| Conread position: | 1240-1384 |
| Cow position: | chr11:51729320-51729462 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1238-1367 |
| Cow position: | chr12:33948915-33949049 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 120 |
| Conread position: | 1238-1367 |
| Cow position: | chr12:45092457-45092589 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1241-1392 |
| Cow position: | chr13:21242151-21242309 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 1236-1388 |
| Cow position: | chr14:42154976-42155132 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 51, 137 |
| Conread position: | 1240-1367 |
| Cow position: | chr14:36775643-36775518 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1240-1383 |
| Cow position: | chr14:24845958-24845818 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1230-1387 |
| Cow position: | chr15:26851183-26851347 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 79, 8 |
| Conread position: | 1240-1389 |
| Cow position: | chr15:5710440-5710290 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 129, 52 |
| Conread position: | 1240-1384 |
| Cow position: | chr16:13290566-13290707 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 129, 63 |
| Conread position: | 1240-1387 |
| Cow position: | chr16:40514430-40514284 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 129, 66 |
| Conread position: | 1240-1390 |
| Cow position: | chr16:25839672-25839820 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 1236-1385 |
| Cow position: | chr17:1025736-1025585 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 133, 5 |
| Conread position: | 1241-1380 |
| Cow position: | chr17:32471688-32471547 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1241-1388 |
| Cow position: | chr17:39759211-39759357 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1239-1367 |
| Cow position: | chr18:15809786-15809657 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1240-1367 |
| Cow position: | chr18:48713569-48713696 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1240-1385 |
| Cow position: | chr18:22790070-22789913 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1240-1387 |
| Cow position: | chr18:42432071-42431918 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1240-1388 |
| Cow position: | chr18:23630589-23630438 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1241-1388 |
| Cow position: | chr18:44262649-44262801 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1186-1388 |
| Cow position: | chr19:27612185-27611987 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 125 |
| Conread position: | 1238-1388 |
| Cow position: | chr19:38500202-38500357 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1240-1381 |
| Cow position: | chr19:47671784-47671927 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 105, 60 |
| Conread position: | 1240-1388 |
| Cow position: | chr19:23756702-23756555 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 1240-1389 |
| Cow position: | chr19:12264003-12264154 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1241-1386 |
| Cow position: | chr19:33575564-33575716 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1240-1391 |
| Cow position: | chr20:38061672-38061519 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1240-1367 |
| Cow position: | chr21:32559250-32559120 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1195-1385 |
| Cow position: | chr22:2109624-2109428 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 44 |
| Conread position: | 1246-1385 |
| Cow position: | chr22:10295089-10295234 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1238-1388 |
| Cow position: | chr23:5732602-5732751 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 131, 70 |
| Conread position: | 1240-1388 |
| Cow position: | chr23:18902001-18901851 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 129, 66 |
| Conread position: | 1242-1385 |
| Cow position: | chr23:16881107-16880962 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1194-1367 |
| Cow position: | chr24:25122325-25122500 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 37 |
| Conread position: | 1237-1390 |
| Cow position: | chr24:1269807-1269962 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 62, 132 |
| Conread position: | 1240-1367 |
| Cow position: | chr24:5360743-5360874 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1233-1389 |
| Cow position: | chr25:2111086-2111245 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 69, 57 |
| Conread position: | 1240-1365 |
| Cow position: | chr25:14210032-14210159 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1240-1386 |
| Cow position: | chr25:32453370-32453226 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 29 |
| Conread position: | 1243-1389 |
| Cow position: | chr25:11432893-11432742 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1240-1388 |
| Cow position: | chr26:34611113-34610962 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1240-1378 |
| Cow position: | chr27:27055194-27055050 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1240-1373 |
| Cow position: | chr28:3914773-3914903 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1237-1388 |
| Cow position: | chr29:31594099-31593951 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1238-1385 |
| Cow position: | chr29:29308524-29308374 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 127, 62 |
| Conread position: | 2-1200 |
| Cow position: | chr3:26735259-26736446 (view UCSC Genome Browser custom track) |
| Alignm length: | 1208 |
| Alignm identity: | 1003 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 162 |
| Conread position: | 1240-1387 |
| Cow position: | chr4:39569247-39569397 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1240-1388 |
| Cow position: | chr4:27657020-27657175 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1240-1388 |
| Cow position: | chr4:33360148-33360296 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 129, 61 |
| Conread position: | 1195-1384 |
| Cow position: | chr5:56877513-56877703 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 112 |
| Conread position: | 1236-1378 |
| Cow position: | chr5:40109565-40109711 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1240-1367 |
| Cow position: | chr5:29599469-29599338 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1240-1388 |
| Cow position: | chr5:44446788-44446636 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 1241-1367 |
| Cow position: | chr5:30302969-30303095 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 57 |
| Conread position: | 1240-1385 |
| Cow position: | chr6:8966188-8966332 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 1242-1388 |
| Cow position: | chr6:54406707-54406551 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 118 |
| Conread position: | 1238-1389 |
| Cow position: | chr7:53785887-53785738 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1240-1367 |
| Cow position: | chr7:38357547-38357420 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1240-1387 |
| Cow position: | chr7:4764938-4765091 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1240-1388 |
| Cow position: | chr7:22793437-22793588 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 1240-1389 |
| Cow position: | chr7:1763517-1763670 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1241-1386 |
| Cow position: | chr7:49222348-49222203 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 128, 59 |
| Conread position: | 1241-1388 |
| Cow position: | chr7:29479621-29479775 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1238-1367 |
| Cow position: | chr8:54052368-54052495 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1240-1368 |
| Cow position: | chr8:19227017-19226889 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1240-1388 |
| Cow position: | chr8:5877705-5877860 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 105, 68 |
| Conread position: | 1240-1388 |
| Cow position: | chr8:60339857-60339711 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 1195-1385 |
| Cow position: | chrX:11656114-11656314 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 1238-1381 |
| Cow position: | chrX:35029850-35029704 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1239-1388 |
| Cow position: | chrX:5487862-5487708 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1240-1390 |
| Cow position: | chrX:20584406-20584554 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 129, 60 |