Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8043O22.5 |
| Conread position: | 350-766 |
| Cow position: | chr1:44100975-44101388 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 12 |
| Conread position: | 350-772 |
| Cow position: | chr1:63502246-63501835 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 67, 8 |
| Conread position: | 350-804 |
| Cow position: | chr1:98864347-98864828 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 14 |
| Conread position: | 380-783 |
| Cow position: | chr1:38396938-38396564 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 44 |
| Conread position: | 413-724 |
| Cow position: | chr1:73011427-73011123 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 419-787 |
| Cow position: | chr1:82356433-82356084 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 24, 162 |
| Conread position: | 421-772 |
| Cow position: | chr1:33389434-33389097 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 250 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 49, 28 |
| Conread position: | 422-703 |
| Cow position: | chr1:15026668-15026391 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 25, 99 |
| Conread position: | 481-804 |
| Cow position: | chr1:31421653-31421958 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 52 |
| Conread position: | 532-791 |
| Cow position: | chr1:44137470-44137707 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 571-740 |
| Cow position: | chr1:34511693-34511530 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 36, 103 |
| Conread position: | 350-580 |
| Cow position: | chr10:11821180-11820951 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 74, 13 |
| Conread position: | 350-804 |
| Cow position: | chr10:6259993-6260450 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 14 |
| Conread position: | 350-804 |
| Cow position: | chr10:24977346-24977793 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 14 |
| Conread position: | 365-804 |
| Cow position: | chr10:64302357-64302794 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 131 |
| Conread position: | 401-562 |
| Cow position: | chr10:39879992-39880153 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 424-688 |
| Cow position: | chr10:28115754-28116013 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 463-697 |
| Cow position: | chr10:64288381-64288603 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 12, 110 |
| Conread position: | 545-725 |
| Cow position: | chr10:21076983-21076812 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 588-804 |
| Cow position: | chr10:11820907-11820680 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 18, 161 |
| Conread position: | 622-804 |
| Cow position: | chr10:39880518-39880697 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 164, 49 |
| Conread position: | 350-797 |
| Cow position: | chr11:36762523-36762072 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 14 |
| Conread position: | 350-799 |
| Cow position: | chr11:13066627-13067071 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 120 |
| Conread position: | 351-771 |
| Cow position: | chr11:36713062-36713476 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 15 |
| Conread position: | 353-725 |
| Cow position: | chr11:30205985-30205601 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 65, 19 |
| Conread position: | 359-526 |
| Cow position: | chr11:30187907-30187734 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 83, 5 |
| Conread position: | 442-799 |
| Cow position: | chr11:44231458-44231105 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 234 |
| Conread position: | 530-799 |
| Cow position: | chr11:13163200-13162938 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 71 |
| Conread position: | 532-799 |
| Cow position: | chr11:30187529-30187259 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 140 |
| Conread position: | 419-711 |
| Cow position: | chr12:17977116-17976829 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 215 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 38, 6 |
| Conread position: | 350-648 |
| Cow position: | chr13:31556593-31556901 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 9 |
| Conread position: | 371-769 |
| Cow position: | chr13:22185132-22185524 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 107 |
| Conread position: | 398-773 |
| Cow position: | chr13:34048685-34048322 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 457-804 |
| Cow position: | chr13:21131712-21131367 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 174 |
| Conread position: | 545-732 |
| Cow position: | chr13:30262049-30261855 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 61, 130 |
| Conread position: | 350-776 |
| Cow position: | chr14:33487940-33487514 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 9 |
| Conread position: | 350-799 |
| Cow position: | chr14:9515822-9516271 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 14 |
| Conread position: | 350-804 |
| Cow position: | chr14:38815810-38816281 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 9 |
| Conread position: | 351-800 |
| Cow position: | chr14:30706286-30706757 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 259 |
| Conread position: | 380-798 |
| Cow position: | chr14:34043672-34044098 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 307 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 53, 99 |
| Conread position: | 400-725 |
| Cow position: | chr14:46513470-46513164 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 412-725 |
| Cow position: | chr14:47655080-47654774 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 18 |
| Conread position: | 549-804 |
| Cow position: | chr14:42122790-42123032 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 110 |
| Conread position: | 347-726 |
| Cow position: | chr15:2007946-2007572 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 96, 17 |
| Conread position: | 350-722 |
| Cow position: | chr15:7787707-7788074 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 86, 9 |
| Conread position: | 359-538 |
| Cow position: | chr15:14634064-14633873 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 78, 5 |
| Conread position: | 359-693 |
| Cow position: | chr15:498747-498408 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 5 |
| Conread position: | 372-736 |
| Cow position: | chr15:30810964-30810609 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 46 |
| Conread position: | 373-725 |
| Cow position: | chr15:20356918-20357291 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 281 |
| Conread position: | 408-724 |
| Cow position: | chr15:11298467-11298775 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 62, 147 |
| Conread position: | 438-785 |
| Cow position: | chr15:1254759-1254428 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 48, 176 |
| Conread position: | 350-587 |
| Cow position: | chr16:41756664-41756908 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 371-699 |
| Cow position: | chr16:29090684-29091006 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 56, 33 |
| Conread position: | 412-733 |
| Cow position: | chr16:25170911-25170599 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 78 |
| Conread position: | 419-741 |
| Cow position: | chr16:28437828-28438147 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 6 |
| Conread position: | 546-804 |
| Cow position: | chr16:24154608-24154861 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 60, 132 |
| Conread position: | 564-711 |
| Cow position: | chr16:41757105-41757244 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 350-598 |
| Cow position: | chr17:16899927-16900190 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 67, 8 |
| Conread position: | 400-704 |
| Cow position: | chr17:13893336-13893627 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 456-769 |
| Cow position: | chr17:15384375-15384062 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 155 |
| Conread position: | 426-804 |
| Cow position: | chr18:4884837-4885209 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 541-804 |
| Cow position: | chr18:9186161-9186406 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 65, 100 |
| Conread position: | 43-219 |
| Cow position: | chr19:32785508-32785680 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 48, 130 |
| Conread position: | 350-772 |
| Cow position: | chr19:32182638-32183059 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 68, 9 |
| Conread position: | 418-607 |
| Cow position: | chr19:17019197-17018999 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 462-726 |
| Cow position: | chr19:32203467-32203218 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 527-776 |
| Cow position: | chr19:7449370-7449607 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 226, 82 |
| Conread position: | 347-804 |
| Cow position: | chr2:63978197-63977726 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 350-668 |
| Cow position: | chr2:43959905-43959590 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 14 |
| Conread position: | 350-773 |
| Cow position: | chr2:77208937-77208510 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 9 |
| Conread position: | 350-804 |
| Cow position: | chr2:45968064-45968543 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 14 |
| Conread position: | 356-607 |
| Cow position: | chr2:70580287-70580549 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 63, 172 |
| Conread position: | 364-572 |
| Cow position: | chr2:45919693-45919908 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 110 |
| Conread position: | 371-776 |
| Cow position: | chr2:11692423-11692039 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 288 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 72, 146 |
| Conread position: | 467-770 |
| Cow position: | chr2:11728139-11727853 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 8, 103 |
| Conread position: | 564-804 |
| Cow position: | chr2:45921213-45921447 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 221, 99 |
| Conread position: | 653-804 |
| Cow position: | chr2:15580030-15580173 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 350-799 |
| Cow position: | chr20:18324774-18325218 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 14 |
| Conread position: | 400-773 |
| Cow position: | chr20:13434199-13434560 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 255 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 415-733 |
| Cow position: | chr20:41720898-41720587 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 350-698 |
| Cow position: | chr21:37293089-37292737 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 14 |
| Conread position: | 350-715 |
| Cow position: | chr21:21925806-21926175 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 68, 9 |
| Conread position: | 364-771 |
| Cow position: | chr21:21518026-21517648 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 274 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 319, 42 |
| Conread position: | 343-776 |
| Cow position: | chr22:297592-298017 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 7 |
| Conread position: | 346-699 |
| Cow position: | chr22:8148126-8148462 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 245 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 61, 49 |
| Conread position: | 350-733 |
| Cow position: | chr22:8875948-8875557 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 16 |
| Conread position: | 351-592 |
| Cow position: | chr22:36552110-36552352 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 91, 13 |
| Conread position: | 364-804 |
| Cow position: | chr22:36580467-36580910 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 181 |
| Conread position: | 371-731 |
| Cow position: | chr22:292139-292514 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 175 |
| Conread position: | 371-786 |
| Cow position: | chr22:36591117-36591530 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 187 |
| Conread position: | 583-770 |
| Cow position: | chr22:36552632-36552812 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 142, 21 |
| Conread position: | 353-799 |
| Cow position: | chr23:26837007-26836548 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 7 |
| Conread position: | 503-737 |
| Cow position: | chr23:13509612-13509383 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 558-776 |
| Cow position: | chr23:6217114-6216896 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 80, 58 |
| Conread position: | 1-383 |
| Cow position: | chr24:6234397-6234007 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 22 |
| Conread position: | 396-777 |
| Cow position: | chr24:14872613-14872982 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 35 |
| Conread position: | 350-726 |
| Cow position: | chr25:20495116-20494750 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 68, 10 |
| Conread position: | 365-771 |
| Cow position: | chr25:3377967-3378376 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 430-668 |
| Cow position: | chr27:6014024-6013794 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 210, 37 |
| Conread position: | 350-790 |
| Cow position: | chr28:10229831-10230284 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 351-776 |
| Cow position: | chr28:29436474-29436910 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 13 |
| Conread position: | 394-783 |
| Cow position: | chr28:5801318-5800940 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 349-804 |
| Cow position: | chr29:16016421-16016868 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 13 |
| Conread position: | 364-746 |
| Cow position: | chr29:8062152-8062537 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 350-737 |
| Cow position: | chr3:31415813-31415408 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 11 |
| Conread position: | 353-776 |
| Cow position: | chr3:70887405-70886984 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 6 |
| Conread position: | 359-679 |
| Cow position: | chr3:18728508-18728827 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 5 |
| Conread position: | 403-798 |
| Cow position: | chr3:64822185-64821805 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 5 |
| Conread position: | 419-724 |
| Cow position: | chr3:12679840-12680136 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 22, 34 |
| Conread position: | 527-776 |
| Cow position: | chr3:17935578-17935813 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 545-776 |
| Cow position: | chr3:37624747-37624529 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 555-804 |
| Cow position: | chr3:49601512-49601743 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 230, 25 |
| Conread position: | 349-774 |
| Cow position: | chr4:968576-968984 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 10 |
| Conread position: | 350-637 |
| Cow position: | chr4:19251635-19251376 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 73, 14 |
| Conread position: | 350-733 |
| Cow position: | chr4:54158726-54158347 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 350-800 |
| Cow position: | chr4:4176870-4176434 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 14 |
| Conread position: | 350-804 |
| Cow position: | chr4:1496312-1496753 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 9 |
| Conread position: | 351-796 |
| Cow position: | chr4:44925439-44925897 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 13 |
| Conread position: | 353-743 |
| Cow position: | chr4:14550063-14549676 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 55, 5 |
| Conread position: | 364-588 |
| Cow position: | chr4:27295672-27295909 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 364-717 |
| Cow position: | chr4:6211856-6212203 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 413-794 |
| Cow position: | chr4:495561-495928 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 477-776 |
| Cow position: | chr4:32622309-32622025 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 350-720 |
| Cow position: | chr5:24108042-24108394 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 13 |
| Conread position: | 350-804 |
| Cow position: | chr5:41357918-41358362 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 9 |
| Conread position: | 371-720 |
| Cow position: | chr5:18401827-18402194 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 269 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 69, 264 |
| Conread position: | 408-766 |
| Cow position: | chr5:58054975-58055315 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 483-794 |
| Cow position: | chr5:28571032-28570739 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 9, 29 |
| Conread position: | 353-731 |
| Cow position: | chr6:35434446-35434074 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 6 |
| Conread position: | 371-697 |
| Cow position: | chr6:31637253-31637576 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 123 |
| Conread position: | 372-769 |
| Cow position: | chr6:53741545-53741174 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 271 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 93, 43 |
| Conread position: | 408-733 |
| Cow position: | chr6:8752276-8752603 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 144 |
| Conread position: | 412-720 |
| Cow position: | chr6:10631211-10630900 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 65 |
| Conread position: | 419-760 |
| Cow position: | chr6:29221160-29221489 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 48, 5 |
| Conread position: | 501-804 |
| Cow position: | chr6:6543496-6543199 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 64 |
| Conread position: | 531-799 |
| Cow position: | chr6:69142532-69142277 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 79, 104 |
| Conread position: | 345-773 |
| Cow position: | chr7:27584316-27584727 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 5 |
| Conread position: | 350-726 |
| Cow position: | chr7:67812965-67812586 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 6, 10 |
| Conread position: | 350-796 |
| Cow position: | chr7:26852068-26851641 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 14 |
| Conread position: | 351-669 |
| Cow position: | chr7:41875864-41876192 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 397-685 |
| Cow position: | chr7:19048198-19048483 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 5, 12 |
| Conread position: | 397-804 |
| Cow position: | chr7:30302957-30302557 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 401-722 |
| Cow position: | chr7:68432492-68432168 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 69, 24 |
| Conread position: | 412-716 |
| Cow position: | chr7:23836875-23836580 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 30 |
| Conread position: | 413-722 |
| Cow position: | chr7:59028714-59028409 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 109 |
| Conread position: | 555-773 |
| Cow position: | chr7:40269928-40270135 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 85, 54 |
| Conread position: | 350-686 |
| Cow position: | chr8:24874528-24874878 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 14 |
| Conread position: | 350-733 |
| Cow position: | chr8:19188818-19188438 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 268 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 64, 9 |
| Conread position: | 350-746 |
| Cow position: | chr8:38577790-38578184 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 14 |
| Conread position: | 359-739 |
| Cow position: | chr8:38585729-38586096 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 5 |
| Conread position: | 399-804 |
| Cow position: | chr8:16085269-16084875 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 239 |
| Conread position: | 569-798 |
| Cow position: | chr8:51328323-51328094 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 38, 108 |
| Conread position: | 350-736 |
| Cow position: | chr9:59511627-59511221 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 9 |
| Conread position: | 375-796 |
| Cow position: | chr9:29328878-29328465 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 103 |
| Conread position: | 380-799 |
| Cow position: | chr9:3726890-3726460 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 53 |
| Conread position: | 388-804 |
| Cow position: | chr9:3393411-3393818 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 27 |
| Conread position: | 400-771 |
| Cow position: | chr9:7012901-7012549 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 30, 45 |
| Conread position: | 420-776 |
| Cow position: | chr9:64159690-64159341 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 10 |
| Conread position: | 350-595 |
| Cow position: | chrX:6250281-6250543 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 75, 14 |
| Conread position: | 350-638 |
| Cow position: | chrX:41888809-41889112 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 8 |
| Conread position: | 350-726 |
| Cow position: | chrX:10417154-10417541 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 9 |
| Conread position: | 350-726 |
| Cow position: | chrX:26427497-26427880 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 350-776 |
| Cow position: | chrX:2012511-2012917 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 294 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 72, 9 |
| Conread position: | 350-798 |
| Cow position: | chrX:13417278-13417715 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 317 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 72, 9 |
| Conread position: | 351-693 |
| Cow position: | chrX:29815001-29814634 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 372-726 |
| Cow position: | chrX:24480924-24481280 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 43, 220 |
| Conread position: | 489-614 |
| Cow position: | chrX:28874769-28874894 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 585-797 |
| Cow position: | chrX:6250966-6251169 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 38, 31 |
| Conread position: | 609-725 |
| Cow position: | chrX:28875127-28875241 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 0 |