Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8045C03.5 |
| Conread position: | 923-1127 |
| Cow position: | chr10:61509958-61509757 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 59, 98 |
| Conread position: | 936-1117 |
| Cow position: | chr10:4329999-4329815 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 48, 142 |
| Conread position: | 912-1128 |
| Cow position: | chr11:44031993-44032203 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 72, 14 |
| Conread position: | 923-1127 |
| Cow position: | chr11:17721810-17721605 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 102 |
| Conread position: | 923-1128 |
| Cow position: | chr11:20238668-20238873 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 63, 121 |
| Conread position: | 923-1128 |
| Cow position: | chr12:14986720-14986924 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 57, 91 |
| Conread position: | 933-1128 |
| Cow position: | chr12:37169965-37169775 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 90 |
| Conread position: | 920-1075 |
| Cow position: | chr13:23479009-23478853 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 103 |
| Conread position: | 920-1127 |
| Cow position: | chr13:14063542-14063745 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 63, 120 |
| Conread position: | 938-1119 |
| Cow position: | chr13:37614235-37614416 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 48, 86 |
| Conread position: | 922-1118 |
| Cow position: | chr15:28099193-28098998 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 62, 101 |
| Conread position: | 926-1128 |
| Cow position: | chr15:22532329-22532127 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 60, 97 |
| Conread position: | 939-1128 |
| Cow position: | chr15:8331138-8331323 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 923-1102 |
| Cow position: | chr16:16025446-16025632 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 63, 159 |
| Conread position: | 923-1102 |
| Cow position: | chr16:33646025-33646203 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 100 |
| Conread position: | 914-1119 |
| Cow position: | chr17:25473238-25473034 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 72, 12 |
| Conread position: | 923-1125 |
| Cow position: | chr17:7810705-7810496 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 159 |
| Conread position: | 923-1127 |
| Cow position: | chr17:24824292-24824499 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 158 |
| Conread position: | 923-1128 |
| Cow position: | chr17:21039607-21039811 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 100 |
| Conread position: | 923-1128 |
| Cow position: | chr17:32333041-32332838 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 102 |
| Conread position: | 922-1128 |
| Cow position: | chr18:44917732-44917934 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 58, 117 |
| Conread position: | 923-1118 |
| Cow position: | chr18:49603067-49602872 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 100 |
| Conread position: | 914-1128 |
| Cow position: | chr19:53189868-53189646 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 14, 167 |
| Conread position: | 923-1103 |
| Cow position: | chr19:39981735-39981916 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 124 |
| Conread position: | 926-1103 |
| Cow position: | chr19:34420410-34420586 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 60, 103 |
| Conread position: | 932-1094 |
| Cow position: | chr19:23394792-23394953 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 54, 82 |
| Conread position: | 938-1103 |
| Cow position: | chr19:40127153-40126988 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 923-1128 |
| Cow position: | chr21:11740046-11739842 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 138 |
| Conread position: | 933-1118 |
| Cow position: | chr21:8506463-8506279 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 53, 90 |
| Conread position: | 933-1118 |
| Cow position: | chr21:8509351-8509167 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 53, 90 |
| Conread position: | 943-1127 |
| Cow position: | chr21:44732950-44732767 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 920-1128 |
| Cow position: | chr22:4060944-4060739 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 66, 103 |
| Conread position: | 923-1119 |
| Cow position: | chr22:16813804-16813996 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 923-1119 |
| Cow position: | chr23:27849008-27849201 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 63, 102 |
| Conread position: | 923-1127 |
| Cow position: | chr23:8698432-8698639 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 61, 152 |
| Conread position: | 933-1128 |
| Cow position: | chr24:37823522-37823716 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 68 |
| Conread position: | 915-1128 |
| Cow position: | chr25:13621356-13621152 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 920-1075 |
| Cow position: | chr25:15573392-15573548 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 103 |
| Conread position: | 920-1128 |
| Cow position: | chr25:22348459-22348247 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 159 |
| Conread position: | 922-1128 |
| Cow position: | chr25:26679232-26679438 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 64, 101 |
| Conread position: | 923-1128 |
| Cow position: | chr25:35762596-35762800 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 938-1103 |
| Cow position: | chr25:26306182-26306017 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 48, 87 |
| Conread position: | 923-1128 |
| Cow position: | chr26:20291666-20291463 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 63, 100 |
| Conread position: | 923-1103 |
| Cow position: | chr27:15003031-15003211 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 60, 121 |
| Conread position: | 923-1118 |
| Cow position: | chr28:4013098-4013291 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 63, 100 |
| Conread position: | 936-1103 |
| Cow position: | chr28:2151413-2151247 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 104 |
| Conread position: | 922-1128 |
| Cow position: | chr29:36530873-36531080 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 59, 103 |
| Conread position: | 923-1098 |
| Cow position: | chr29:23825203-23825030 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 63, 100 |
| Conread position: | 1-771 |
| Cow position: | chr3:77331446-77332227 (view UCSC Genome Browser custom track) |
| Alignm length: | 799 |
| Alignm identity: | 642 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 61 |
| Conread position: | 759-937 |
| Cow position: | chr3:77332304-77332477 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 923-1128 |
| Cow position: | chr3:60264731-60264532 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 100 |
| Conread position: | 932-1121 |
| Cow position: | chr3:79196753-79196945 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 54, 143 |
| Conread position: | 923-1103 |
| Cow position: | chr4:48485996-48486176 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 57, 116 |
| Conread position: | 931-1128 |
| Cow position: | chr4:38944248-38944052 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 53, 92 |
| Conread position: | 920-1114 |
| Cow position: | chr5:30276722-30276913 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 88 |
| Conread position: | 923-1121 |
| Cow position: | chr5:56070894-56071093 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 60, 100 |
| Conread position: | 923-1128 |
| Cow position: | chr5:24996187-24995980 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 63, 44 |
| Conread position: | 923-1126 |
| Cow position: | chr6:19264450-19264250 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 67 |
| Conread position: | 923-1119 |
| Cow position: | chr7:31523596-31523792 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 62, 100 |
| Conread position: | 923-1119 |
| Cow position: | chr7:36996413-36996604 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 77, 60 |
| Conread position: | 923-1119 |
| Cow position: | chr7:50066065-50065870 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 104 |
| Conread position: | 932-1128 |
| Cow position: | chr7:36665385-36665582 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 118, 51 |
| Conread position: | 920-1100 |
| Cow position: | chr8:34060145-34059966 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 105 |
| Conread position: | 923-1103 |
| Cow position: | chr8:39807619-39807799 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 59, 119 |
| Conread position: | 923-1104 |
| Cow position: | chr8:32620963-32620779 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 63, 78 |
| Conread position: | 923-1117 |
| Cow position: | chr8:10970854-10971048 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 61, 121 |
| Conread position: | 939-1128 |
| Cow position: | chr8:55194209-55194397 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 47, 82 |
| Conread position: | 923-1127 |
| Cow position: | chr9:13169643-13169845 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 58, 91 |
| Conread position: | 923-1128 |
| Cow position: | chr9:41728278-41728074 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 63, 50 |
| Conread position: | 920-1128 |
| Cow position: | chrX:2935990-2936196 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 101 |
| Conread position: | 923-1128 |
| Cow position: | chrX:20957274-20957480 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 154 |
| Conread position: | 923-1128 |
| Cow position: | chrX:27145640-27145843 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 61, 91 |
| Conread position: | 926-1128 |
| Cow position: | chrX:27668919-27668723 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 97 |