Cow genome map

Conread name: Ss1.1-Pig4-TMW8049B07.5

Conread position: 473-882
Cow position: chr14:680401-680810 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 257
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 35

Conread position: 473-916
Cow position: chr14:433904-434347 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 265
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 150, 121

Conread position: 473-916
Cow position: chr14:3061227-3060784 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 264
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 200, 208

Conread position: 473-918
Cow position: chr14:3080416-3079971 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 266
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 397, 378

Conread position: 473-922
Cow position: chr14:680737-681186 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 268
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 134, 140

Conread position: 473-922
Cow position: chr14:25895124-25895573 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 273
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 133, 125

Conread position: 480-844
Cow position: chr14:3128005-3127641 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 216
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 480-902
Cow position: chr14:3080241-3079819 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 252
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 28

Conread position: 480-914
Cow position: chr14:3061388-3060954 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 259
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 28

Conread position: 480-916
Cow position: chr14:433827-434263 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 263
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 120, 112

Conread position: 480-916
Cow position: chr14:3127753-3127317 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 263
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 133, 126

Conread position: 480-922
Cow position: chr14:25895299-25895741 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 268
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 119, 124

Conread position: 480-931
Cow position: chr14:680576-681028 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 286
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 114, 122

Conread position: 488-754
Cow position: chr14:3079981-3079715 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 107, 116

Conread position: 488-918
Cow position: chr14:3080149-3079719 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 264
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 25, 20

Conread position: 489-911
Cow position: chr14:3127828-3127406 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 255
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 118, 124

Conread position: 517-845
Cow position: chr14:434032-434360 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 207
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 96

Conread position: 518-956
Cow position: chr14:25895001-25895439 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 263
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 14

Conread position: 530-916
Cow position: chr14:433794-434179 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 240
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 77, 25

Conread position: 536-844
Cow position: chr14:3080521-3080213 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 196
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 231, 214

Conread position: 538-914
Cow position: chr14:3061078-3060702 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 226
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 63

Conread position: 538-922
Cow position: chr14:3080267-3079883 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 238
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 69, 75

Conread position: 473-916
Cow position: chr17:41440777-41440334 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 273
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 80, 73

Conread position: 473-916
Cow position: chr17:44467534-44467977 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 273
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 130

Conread position: 478-840
Cow position: chr17:41440604-41440242 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 232
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 63, 55

Conread position: 478-916
Cow position: chr17:41440688-41440250 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 267
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 289, 296

Conread position: 478-916
Cow position: chr17:41440856-41440418 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 279
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 30

Conread position: 479-933
Cow position: chr17:44467708-44468162 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 275
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 110

Conread position: 480-916
Cow position: chr17:41440938-41440502 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 262
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 27

Conread position: 480-916
Cow position: chr17:41441022-41440586 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 277
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 115, 129

Conread position: 473-839
Cow position: chr18:53610204-53609838 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 222
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 31, 39

Conread position: 473-902
Cow position: chr18:56391336-56390907 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 265
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 122, 130

Conread position: 479-901
Cow position: chr18:56316402-56316824 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 255
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 125

Conread position: 480-757
Cow position: chr18:52012005-52011729 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 180
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 127, 133

Conread position: 480-902
Cow position: chr18:52012173-52011751 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 252
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 127, 133

Conread position: 480-905
Cow position: chr18:53610533-53610108 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 257
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 120, 133

Conread position: 480-916
Cow position: chr18:55497520-55497084 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 270
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 34, 27

Conread position: 488-805
Cow position: chr18:53635682-53635365 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 206
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 20

Conread position: 488-955
Cow position: chr18:56128483-56128950 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 284
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 107, 119

Conread position: 489-892
Cow position: chr18:56329320-56328917 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 245
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 24, 19

Conread position: 489-918
Cow position: chr18:49033271-49032842 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 259
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 106, 122

Conread position: 517-981
Cow position: chr18:56316524-56316985 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 276
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 238, 224

Conread position: 519-848
Cow position: chr18:56329206-56328875 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 203
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 241, 231

Conread position: 519-902
Cow position: chr18:53610326-53609943 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 235
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 15

Conread position: 528-914
Cow position: chr18:56391449-56391063 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 241
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 80, 85

Conread position: 536-925
Cow position: chr18:53635970-53635581 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 239
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 57

Conread position: 538-893
Cow position: chr18:52012283-52011928 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 214
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 230, 209

Conread position: 539-919
Cow position: chr18:53635799-53635420 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 233
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 71

Conread position: 540-902
Cow position: chr18:56128367-56128729 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 219
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 67

Conread position: 540-918
Cow position: chr18:56329605-56329227 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 230
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 69, 59

Conread position: 563-902
Cow position: chr18:55497689-55497350 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 215
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 19

Conread position: 468-922
Cow position: chr21:12658920-12659374 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 273
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 299, 286

Conread position: 473-922
Cow position: chr21:12659093-12659542 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 264
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 473-933
Cow position: chr21:12659009-12659469 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 275
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 473-955
Cow position: chr21:12659177-12659659 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 279
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 480-922
Cow position: chr21:12659268-12659710 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 264
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 480-931
Cow position: chr21:12659436-12659887 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 272
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 28

Conread position: 517-902
Cow position: chr21:12658885-12659270 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 235
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 518-916
Cow position: chr21:12659390-12659788 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 238
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 633-916
Cow position: chr21:12658833-12659116 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 176
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-499
Cow position: chr22:30216424-30215922 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 496-633
Cow position: chr22:30215578-30215441 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 133
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 628-770
Cow position: chr22:30215244-30215102 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 137
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 764-1164
Cow position: chr22:30214234-30213824 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 0

Conread position: 468-916
Cow position: chr25:3663934-3664382 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 279
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 125, 136

Conread position: 473-916
Cow position: chr25:3664023-3664466 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 267
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 35

Conread position: 473-916
Cow position: chr25:25652616-25653059 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 268
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 122, 130

Conread position: 473-926
Cow position: chr25:3664107-3664560 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 270
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 122, 131

Conread position: 473-928
Cow position: chr25:25652868-25653324 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 276
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 47, 33

Conread position: 476-916
Cow position: chr25:25652283-25652723 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 267
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 30

Conread position: 479-957
Cow position: chr25:25652706-25653184 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 279
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 480-957
Cow position: chr25:25652791-25653268 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 293
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 33, 28

Conread position: 489-916
Cow position: chr25:25652380-25652807 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 252
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 538-856
Cow position: chr25:33157316-33156998 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 205
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 54, 72

Conread position: 544-903
Cow position: chr25:25652180-25652542 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 229
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 72

Conread position: 473-916
Cow position: chr3:20194730-20195173 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 280
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 31, 38

Conread position: 479-922
Cow position: chr3:20194820-20195263 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 264
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 113, 125

Conread position: 473-879
Cow position: chr4:65494843-65494437 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 242
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 207, 223

Conread position: 473-818
Cow position: chr6:49428908-49429253 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 224
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 216, 203

Conread position: 473-916
Cow position: chr6:49428740-49429183 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 277
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 310, 320

Conread position: 473-922
Cow position: chr6:49428320-49428769 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 267
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 473-922
Cow position: chr6:49428572-49429021 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 273
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 61

Conread position: 473-922
Cow position: chr6:49428656-49429105 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 281
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 40, 35

Conread position: 473-922
Cow position: chr6:49428992-49429441 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 277
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 144, 125

Conread position: 473-956
Cow position: chr6:49428488-49428971 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 294
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 40, 27

Conread position: 488-956
Cow position: chr6:49428251-49428719 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 286
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 40

Conread position: 579-919
Cow position: chrX:13826751-13826411 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 212
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 170