Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8049C19.5 |
| Conread position: | 118-205 |
| Cow position: | chr10:21690393-21690480 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-324 |
| Cow position: | chr10:21691460-21691573 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 324-456 |
| Cow position: | chr10:21694832-21694964 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 453-693 |
| Cow position: | chr10:21700616-21700856 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 748-964 |
| Cow position: | chr10:21702792-21703005 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 961-1129 |
| Cow position: | chr10:21704355-21704523 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1290-1500 |
| Cow position: | chr10:21708166-21708371 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 174 |
| Conread position: | 118-205 |
| Cow position: | chr13:4861452-4861365 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 118-211 |
| Cow position: | chr13:9556052-9556145 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-324 |
| Cow position: | chr13:9556923-9557036 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 324-454 |
| Cow position: | chr13:9558587-9558717 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 120 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 452-746 |
| Cow position: | chr13:22726709-22726414 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 136 |
| Conread position: | 453-746 |
| Cow position: | chr13:9563056-9563349 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 748-964 |
| Cow position: | chr13:9563942-9564158 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 812-964 |
| Cow position: | chr13:22725817-22725665 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 961-1192 |
| Cow position: | chr13:9565386-9565617 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 961-1192 |
| Cow position: | chr13:22724257-22724029 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1290-1500 |
| Cow position: | chr13:9569206-9569409 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 1291-1579 |
| Cow position: | chr13:22719583-22719301 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 118 |
| Conread position: | 1295-1500 |
| Cow position: | chr13:22779179-22779377 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 1566-1805 |
| Cow position: | chr13:22719090-22718865 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 63, 52 |
| Conread position: | 1005-1128 |
| Cow position: | chr18:40239743-40239866 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 118-205 |
| Cow position: | chr21:3060780-3060693 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-324 |
| Cow position: | chr21:3059715-3059602 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 324-454 |
| Cow position: | chr21:3058058-3057928 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 120 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 453-746 |
| Cow position: | chr21:3053895-3053602 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 728-1573 |
| Cow position: | chr21:30246653-30245808 (view UCSC Genome Browser custom track) |
| Alignm length: | 866 |
| Alignm identity: | 676 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 570, 15 |
| Conread position: | 748-964 |
| Cow position: | chr21:3053017-3052802 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1290-1500 |
| Cow position: | chr21:3048520-3048316 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 173 |
| Conread position: | 1568-1715 |
| Cow position: | chr21:30245589-30245443 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 452-745 |
| Cow position: | chr26:31649-31940 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 812-964 |
| Cow position: | chr26:32552-32704 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 990-1192 |
| Cow position: | chr26:33356-33558 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1077-1192 |
| Cow position: | chr26:35923-36038 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1291-1579 |
| Cow position: | chr26:39236-39518 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 117 |
| Conread position: | 1551-1806 |
| Cow position: | chr26:39715-39955 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 222, 104 |
| Conread position: | 1-220 |
| Cow position: | chr3:41792137-41792355 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 73 |
| Conread position: | 364-816 |
| Cow position: | chr3:41792256-41792705 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 17 |
| Conread position: | 805-990 |
| Cow position: | chr3:41793054-41793241 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1285-1461 |
| Cow position: | chr3:41793330-41793507 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 143 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 7, 0 |