Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8050B05.5.106 |
| Conread position: | 164-276 |
| Cow position: | chr11:85447272-85447160 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 269-386 |
| Cow position: | chr11:85447090-85446973 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 385-1444 |
| Cow position: | chr11:85446444-85445385 (view UCSC Genome Browser custom track) |
| Alignm length: | 1060 |
| Alignm identity: | 981 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1090-1286 |
| Cow position: | chr11:79469025-79468829 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-1451 |
| Cow position: | chr12:27341181-27340030 (view UCSC Genome Browser custom track) |
| Alignm length: | 1157 |
| Alignm identity: | 964 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 394-1413 |
| Cow position: | chr13:37744718-37743699 (view UCSC Genome Browser custom track) |
| Alignm length: | 1020 |
| Alignm identity: | 850 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1048-1394 |
| Cow position: | chr14:42472187-42471853 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 483-852 |
| Cow position: | chr17:45756447-45756076 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 9, 90 |
| Conread position: | 483-1158 |
| Cow position: | chr17:45721918-45722595 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 89 |
| Conread position: | 278-386 |
| Cow position: | chr18:15604686-15604794 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 385-1481 |
| Cow position: | chr18:15605534-15606632 (view UCSC Genome Browser custom track) |
| Alignm length: | 1100 |
| Alignm identity: | 983 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1029, 1063 |
| Conread position: | 625-1158 |
| Cow position: | chr2:65211016-65211549 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 335 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 75, 88 |
| Conread position: | 1-165 |
| Cow position: | chr23:31859743-31859580 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 164-276 |
| Cow position: | chr23:20803043-20802931 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 164-276 |
| Cow position: | chr23:31823407-31823295 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 164-276 |
| Cow position: | chr23:31836271-31836159 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 164-278 |
| Cow position: | chr23:31858834-31858720 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 269-386 |
| Cow position: | chr23:31822966-31822849 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 113 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 269-386 |
| Cow position: | chr23:31835829-31835712 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 113 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 269-386 |
| Cow position: | chr23:31858459-31858342 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 112 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-1451 |
| Cow position: | chr23:20802303-20801221 (view UCSC Genome Browser custom track) |
| Alignm length: | 1086 |
| Alignm identity: | 940 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1053, 0 |
| Conread position: | 385-1447 |
| Cow position: | chr23:31822146-31821083 (view UCSC Genome Browser custom track) |
| Alignm length: | 1064 |
| Alignm identity: | 1029 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 0 |
| Conread position: | 385-1680 |
| Cow position: | chr23:31858004-31856703 (view UCSC Genome Browser custom track) |
| Alignm length: | 1305 |
| Alignm identity: | 1225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1064, 1102 |
| Conread position: | 385-1435 |
| Cow position: | chr24:29219732-29218679 (view UCSC Genome Browser custom track) |
| Alignm length: | 1054 |
| Alignm identity: | 953 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1020, 0 |
| Conread position: | 109-741 |
| Cow position: | chr5:17899875-17899237 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 387 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 103, 115 |
| Conread position: | 496-1158 |
| Cow position: | chr5:67434063-67433401 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 410 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 70, 84 |
| Conread position: | 164-278 |
| Cow position: | chr7:13892053-13892167 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-386 |
| Cow position: | chr7:13892278-13892384 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 385-1450 |
| Cow position: | chr7:13895711-13896772 (view UCSC Genome Browser custom track) |
| Alignm length: | 1066 |
| Alignm identity: | 973 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1014, 0 |