Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8051N21.3
        

               Conread position:
               209-501
               

               Cow position:
               chr1:54267695-54267983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 53
               

               Conread position:
               219-500
               

               Cow position:
               chr1:86682336-86682610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               142, 23
               

               Conread position:
               225-505
               

               Cow position:
               chr1:5596984-5597263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               129, 65
               

               Conread position:
               227-501
               

               Cow position:
               chr1:78811264-78810988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               129, 63
               

               Conread position:
               231-501
               

               Cow position:
               chr1:81290725-81290454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               111, 19
               

               Conread position:
               232-466
               

               Cow position:
               chr1:45315411-45315652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               86, 18
               

               Conread position:
               235-484
               

               Cow position:
               chr1:41027290-41027042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               116, 55
               

               Conread position:
               244-501
               

               Cow position:
               chr1:1980901-1981164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 36
               

               Conread position:
               244-501
               

               Cow position:
               chr1:81481176-81481434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               107, 46
               

               Conread position:
               245-501
               

               Cow position:
               chr1:61885121-61884863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               259-501
               

               Cow position:
               chr1:56618462-56618700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               54, 33
               

               Conread position:
               262-501
               

               Cow position:
               chr1:58754607-58754845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               93, 28
               

               Conread position:
               268-468
               

               Cow position:
               chr1:42887095-42887295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               114, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr1:71078777-71079007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr1:89449083-89448848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               79, 22
               

               Conread position:
               276-501
               

               Cow position:
               chr1:87197997-87197766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               80, 14
               

               Conread position:
               316-499
               

               Cow position:
               chr1:80584564-80584383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               67, 27
               

               Conread position:
               348-497
               

               Cow position:
               chr1:102529758-102529902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               228-501
               

               Cow position:
               chr10:43586092-43586367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               85, 39
               

               Conread position:
               232-501
               

               Cow position:
               chr10:14947443-14947180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 9
               

               Conread position:
               232-501
               

               Cow position:
               chr10:23346119-23346383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               233-500
               

               Cow position:
               chr10:61509757-61510019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               150, 57
               

               Conread position:
               239-500
               

               Cow position:
               chr10:46327875-46327610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               244-501
               

               Cow position:
               chr10:20095946-20095678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               99, 47
               

               Conread position:
               246-481
               

               Cow position:
               chr10:17150049-17149819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               137, 44
               

               Conread position:
               248-499
               

               Cow position:
               chr10:5151529-5151265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               9, 44
               

               Conread position:
               260-492
               

               Cow position:
               chr10:33666005-33665768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               65, 30
               

               Conread position:
               268-468
               

               Cow position:
               chr10:60697474-60697671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               268-497
               

               Cow position:
               chr10:31027486-31027722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               268-498
               

               Cow position:
               chr10:6384680-6384457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               115, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr10:19191908-19191681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               86, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr10:27118808-27119046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               99, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr10:30353005-30352768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               68, 23
               

               Conread position:
               268-501
               

               Cow position:
               chr10:56828165-56828398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 22
               

               Conread position:
               269-497
               

               Cow position:
               chr10:6490032-6489794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 21
               

               Conread position:
               287-503
               

               Cow position:
               chr10:28395169-28395386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               49, 67
               

               Conread position:
               302-502
               

               Cow position:
               chr10:21657539-21657343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 22
               

               Conread position:
               320-500
               

               Cow position:
               chr10:6252395-6252577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               43, 23
               

               Conread position:
               320-501
               

               Cow position:
               chr10:39228253-39228066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               334-501
               

               Cow position:
               chr10:35778819-35778981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               51, 9
               

               Conread position:
               350-505
               

               Cow position:
               chr10:48573608-48573765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               383-498
               

               Cow position:
               chr10:22520124-22520240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               224-501
               

               Cow position:
               chr11:20238882-20238598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               89, 36
               

               Conread position:
               231-501
               

               Cow position:
               chr11:63998893-63999163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               120, 10
               

               Conread position:
               232-501
               

               Cow position:
               chr11:34646797-34646514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               14, 62
               

               Conread position:
               234-537
               

               Cow position:
               chr11:17721605-17721917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               113, 16
               

               Conread position:
               240-501
               

               Cow position:
               chr11:40608402-40608670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               242-501
               

               Cow position:
               chr11:55494855-55494604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 46
               

               Conread position:
               243-486
               

               Cow position:
               chr11:18852090-18851849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               71, 14
               

               Conread position:
               243-499
               

               Cow position:
               chr11:80564485-80564221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               80, 47
               

               Conread position:
               266-501
               

               Cow position:
               chr11:50152648-50152889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               57, 24
               

               Conread position:
               268-496
               

               Cow position:
               chr11:1625059-1625294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               268-496
               

               Cow position:
               chr11:17083151-17083381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               115, 79
               

               Conread position:
               269-501
               

               Cow position:
               chr11:17036370-17036603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               49, 21
               

               Conread position:
               287-500
               

               Cow position:
               chr11:45646448-45646667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 130
               

               Conread position:
               287-501
               

               Cow position:
               chr11:30830473-30830689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               63, 56
               

               Conread position:
               317-501
               

               Cow position:
               chr11:26845480-26845668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               34, 163
               

               Conread position:
               320-500
               

               Cow position:
               chr11:47772280-47772465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               325-483
               

               Cow position:
               chr11:36328931-36329091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               350-501
               

               Cow position:
               chr11:16342151-16342304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               350-501
               

               Cow position:
               chr11:69119371-69119218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               221-501
               

               Cow position:
               chr12:18420735-18421019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               69, 35
               

               Conread position:
               232-450
               

               Cow position:
               chr12:14986924-14986705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               119, 58
               

               Conread position:
               233-482
               

               Cow position:
               chr12:12233059-12232807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               15, 52
               

               Conread position:
               233-501
               

               Cow position:
               chr12:17269976-17269705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               121, 25
               

               Conread position:
               245-501
               

               Cow position:
               chr12:25561531-25561276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               256-498
               

               Cow position:
               chr12:26777041-26777283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               85, 34
               

               Conread position:
               261-501
               

               Cow position:
               chr12:15089664-15089419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 29
               

               Conread position:
               265-501
               

               Cow position:
               chr12:18518816-18518572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               89, 20
               

               Conread position:
               268-498
               

               Cow position:
               chr12:19261336-19261102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 22
               

               Conread position:
               268-500
               

               Cow position:
               chr12:17879164-17879397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               75, 15
               

               Conread position:
               269-497
               

               Cow position:
               chr12:5554197-5554426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 22
               

               Conread position:
               287-500
               

               Cow position:
               chr12:11056994-11056781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               55, 67
               

               Conread position:
               214-500
               

               Cow position:
               chr13:17089757-17089483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               218-500
               

               Cow position:
               chr13:43479821-43480097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               90, 31
               

               Conread position:
               219-501
               

               Cow position:
               chr13:46329840-46329563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               128, 18
               

               Conread position:
               227-501
               

               Cow position:
               chr13:18058480-18058205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               124, 23
               

               Conread position:
               237-498
               

               Cow position:
               chr13:17292351-17292095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               81, 23
               

               Conread position:
               240-498
               

               Cow position:
               chr13:8374983-8374734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 51
               

               Conread position:
               243-501
               

               Cow position:
               chr13:13320579-13320835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 43
               

               Conread position:
               243-501
               

               Cow position:
               chr13:20217617-20217354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               260-501
               

               Cow position:
               chr13:24585847-24586084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               91, 30
               

               Conread position:
               268-498
               

               Cow position:
               chr13:15194914-15194694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               115, 22
               

               Conread position:
               268-498
               

               Cow position:
               chr13:20314818-20314582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               268-499
               

               Cow position:
               chr13:35557304-35557066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               79, 22
               

               Conread position:
               268-499
               

               Cow position:
               chr13:54701988-54702226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               50, 25
               

               Conread position:
               268-500
               

               Cow position:
               chr13:20784401-20784634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               74, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr13:25817336-25817569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               114, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr13:55674403-55674168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 22
               

               Conread position:
               272-501
               

               Cow position:
               chr13:20473864-20473641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               111, 21
               

               Conread position:
               278-505
               

               Cow position:
               chr13:54389204-54388974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               67, 12
               

               Conread position:
               287-501
               

               Cow position:
               chr13:23478853-23479073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               287-501
               

               Cow position:
               chr13:55494697-55494479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               55, 71
               

               Conread position:
               295-500
               

               Cow position:
               chr13:41806605-41806815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               23, 50
               

               Conread position:
               374-505
               

               Cow position:
               chr13:55316277-55316144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               231-501
               

               Cow position:
               chr14:18345896-18345632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               151, 11
               

               Conread position:
               244-479
               

               Cow position:
               chr14:13845829-13846062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               110, 13
               

               Conread position:
               259-501
               

               Cow position:
               chr14:26433395-26433142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               55, 33
               

               Conread position:
               262-499
               

               Cow position:
               chr14:16760256-16760498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               49, 28
               

               Conread position:
               268-499
               

               Cow position:
               chr14:20640766-20640531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               79, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr14:33791056-33791284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr14:41210727-41210953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               115, 22
               

               Conread position:
               269-535
               

               Cow position:
               chr14:41749892-41749626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               82, 21
               

               Conread position:
               350-499
               

               Cow position:
               chr14:19372286-19372437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               228-501
               

               Cow position:
               chr15:30471106-30470825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 13
               

               Conread position:
               243-500
               

               Cow position:
               chr15:24994626-24994370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               68, 32
               

               Conread position:
               243-500
               

               Cow position:
               chr15:47042759-47042484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               244-484
               

               Cow position:
               chr15:53716319-53716563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               17, 47
               

               Conread position:
               259-501
               

               Cow position:
               chr15:8353942-8354188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               83, 24
               

               Conread position:
               268-499
               

               Cow position:
               chr15:14888727-14888498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               113, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr15:25906828-25907062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               117, 22
               

               Conread position:
               268-503
               

               Cow position:
               chr15:36887749-36887973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               287-499
               

               Cow position:
               chr15:4694675-4694888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               96, 56
               

               Conread position:
               289-501
               

               Cow position:
               chr15:14870685-14870888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               360-510
               

               Cow position:
               chr15:34751093-34751240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 44
               

               Conread position:
               375-501
               

               Cow position:
               chr15:13515387-13515513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               98, 5
               

               Conread position:
               13-225
               

               Cow position:
               chr16:1313074-1312861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               219-501
               

               Cow position:
               chr16:8738298-8738009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               28, 73
               

               Conread position:
               227-505
               

               Cow position:
               chr16:33705024-33704747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               34, 64
               

               Conread position:
               230-501
               

               Cow position:
               chr16:11584190-11584453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               124, 20
               

               Conread position:
               244-501
               

               Cow position:
               chr16:48398053-48398312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               92, 46
               

               Conread position:
               245-479
               

               Cow position:
               chr16:42078645-42078880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               97, 45
               

               Conread position:
               245-499
               

               Cow position:
               chr16:45139867-45139618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               250-501
               

               Cow position:
               chr16:34753755-34754016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               85, 36
               

               Conread position:
               267-500
               

               Cow position:
               chr16:45294727-45294488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               72, 23
               

               Conread position:
               268-498
               

               Cow position:
               chr16:46433144-46433382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               268-499
               

               Cow position:
               chr16:16571080-16570861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               115, 22
               

               Conread position:
               268-500
               

               Cow position:
               chr16:11134805-11135037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr16:25839791-25839563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               115, 22
               

               Conread position:
               269-488
               

               Cow position:
               chr16:45122221-45121991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 21
               

               Conread position:
               289-505
               

               Cow position:
               chr16:45678138-45677918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               296-501
               

               Cow position:
               chr16:25387127-25386919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               17, 112
               

               Conread position:
               315-509
               

               Cow position:
               chr16:31880640-31880827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               188, 28
               

               Conread position:
               320-480
               

               Cow position:
               chr16:17460293-17460132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               331-501
               

               Cow position:
               chr16:52790169-52789996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 5
               

               Conread position:
               332-500
               

               Cow position:
               chr16:21040136-21039970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               226-500
               

               Cow position:
               chr17:32332831-32333106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               121, 24
               

               Conread position:
               227-501
               

               Cow position:
               chr17:11664321-11664603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 21
               

               Conread position:
               228-501
               

               Cow position:
               chr17:5422813-5423087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               20, 67
               

               Conread position:
               231-501
               

               Cow position:
               chr17:12959359-12959090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               105, 119
               

               Conread position:
               232-499
               

               Cow position:
               chr17:32138159-32138436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               232-500
               

               Cow position:
               chr17:34790812-34791080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               108, 28
               

               Conread position:
               237-494
               

               Cow position:
               chr17:25511493-25511234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               114, 53
               

               Conread position:
               242-501
               

               Cow position:
               chr17:9824913-9824654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               100, 48
               

               Conread position:
               242-501
               

               Cow position:
               chr17:17059666-17059408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 50
               

               Conread position:
               243-500
               

               Cow position:
               chr17:32989718-32989462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               108, 34
               

               Conread position:
               243-500
               

               Cow position:
               chr17:32993382-32993638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               108, 34
               

               Conread position:
               243-501
               

               Cow position:
               chr17:29995190-29995453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               70, 47
               

               Conread position:
               244-501
               

               Cow position:
               chr17:26574978-26575246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               101, 46
               

               Conread position:
               245-505
               

               Cow position:
               chr17:21039800-21039542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               268-497
               

               Cow position:
               chr17:12325550-12325774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               268-499
               

               Cow position:
               chr17:33933529-33933761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr17:6318648-6318882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               83, 23
               

               Conread position:
               268-501
               

               Cow position:
               chr17:12536254-12536483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               116, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr17:25800664-25800897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               51, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr17:25901428-25901182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               45, 22
               

               Conread position:
               268-520
               

               Cow position:
               chr17:9932091-9932337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 22
               

               Conread position:
               270-500
               

               Cow position:
               chr17:33288440-33288673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               74, 20
               

               Conread position:
               280-498
               

               Cow position:
               chr17:28284823-28285043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               97, 54
               

               Conread position:
               287-501
               

               Cow position:
               chr17:24824451-24824227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               42, 201
               

               Conread position:
               289-506
               

               Cow position:
               chr17:18108886-18109105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               60, 119
               

               Conread position:
               326-501
               

               Cow position:
               chr17:11368689-11368866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               375-501
               

               Cow position:
               chr17:3577650-3577521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               218-501
               

               Cow position:
               chr18:32251969-32252258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               95, 75
               

               Conread position:
               219-499
               

               Cow position:
               chr18:23630421-23630694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               164, 31
               

               Conread position:
               228-501
               

               Cow position:
               chr18:29356447-29356715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               41, 22
               

               Conread position:
               231-501
               

               Cow position:
               chr18:1571059-1571325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               120, 25
               

               Conread position:
               235-501
               

               Cow position:
               chr18:47512177-47511916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               148, 45
               

               Conread position:
               238-486
               

               Cow position:
               chr18:31082169-31082424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               66, 18
               

               Conread position:
               243-501
               

               Cow position:
               chr18:42431921-42432182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 47
               

               Conread position:
               248-501
               

               Cow position:
               chr18:49015282-49015037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               135, 42
               

               Conread position:
               250-505
               

               Cow position:
               chr18:2146428-2146681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               134, 40
               

               Conread position:
               260-501
               

               Cow position:
               chr18:10576257-10576014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               123, 30
               

               Conread position:
               268-499
               

               Cow position:
               chr18:42479434-42479674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               69, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr18:9974184-9974412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr18:43796813-43797042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr18:48713688-48713461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               115, 22
               

               Conread position:
               269-496
               

               Cow position:
               chr18:20126437-20126220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               118, 21
               

               Conread position:
               287-499
               

               Cow position:
               chr18:49038587-49038373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               65, 56
               

               Conread position:
               317-483
               

               Cow position:
               chr18:28923750-28923920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               317-501
               

               Cow position:
               chr18:9176998-9176812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               34, 108
               

               Conread position:
               353-501
               

               Cow position:
               chr18:11685041-11684892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 19
               

               Conread position:
               224-498
               

               Cow position:
               chr19:10238944-10238671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               127, 19
               

               Conread position:
               242-501
               

               Cow position:
               chr19:39576380-39576637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               143, 48
               

               Conread position:
               243-498
               

               Cow position:
               chr19:12052654-12052912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               99, 47
               

               Conread position:
               243-498
               

               Cow position:
               chr19:12067937-12067679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               99, 47
               

               Conread position:
               243-499
               

               Cow position:
               chr19:23889293-23889546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               70, 47
               

               Conread position:
               243-501
               

               Cow position:
               chr19:33575712-33575456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               107, 47
               

               Conread position:
               244-499
               

               Cow position:
               chr19:18129752-18129488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 46
               

               Conread position:
               259-501
               

               Cow position:
               chr19:21378289-21378538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               67, 31
               

               Conread position:
               262-501
               

               Cow position:
               chr19:42767929-42768166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 28
               

               Conread position:
               268-492
               

               Cow position:
               chr19:23088149-23087926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               268-498
               

               Cow position:
               chr19:40126997-40127231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               79, 22
               

               Conread position:
               268-499
               

               Cow position:
               chr19:33913698-33913459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               70, 22
               

               Conread position:
               268-500
               

               Cow position:
               chr19:34420577-34420347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               74, 22
               

               Conread position:
               269-468
               

               Cow position:
               chr19:38732305-38732104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               269-501
               

               Cow position:
               chr19:46455008-46454779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 23
               

               Conread position:
               280-499
               

               Cow position:
               chr19:15719469-15719684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               287-500
               

               Cow position:
               chr19:28447589-28447374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               57, 131
               

               Conread position:
               206-486
               

               Cow position:
               chr2:972060-971783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               152, 73
               

               Conread position:
               212-499
               

               Cow position:
               chr2:46188861-46189151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               11, 39
               

               Conread position:
               218-501
               

               Cow position:
               chr2:41248793-41248512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               112, 24
               

               Conread position:
               224-518
               

               Cow position:
               chr2:38362154-38362440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               30, 57
               

               Conread position:
               229-501
               

               Cow position:
               chr2:41462206-41462482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               118, 62
               

               Conread position:
               231-501
               

               Cow position:
               chr2:18997930-18997670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               120, 10
               

               Conread position:
               232-482
               

               Cow position:
               chr2:60091224-60091469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               85, 11
               

               Conread position:
               232-505
               

               Cow position:
               chr2:46033551-46033273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               29, 53
               

               Conread position:
               235-499
               

               Cow position:
               chr2:57733640-57733376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               150, 55
               

               Conread position:
               242-504
               

               Cow position:
               chr2:13002002-13001744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               57, 48
               

               Conread position:
               242-529
               

               Cow position:
               chr2:44065770-44065496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               93, 48
               

               Conread position:
               243-501
               

               Cow position:
               chr2:45498997-45499257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 48
               

               Conread position:
               243-501
               

               Cow position:
               chr2:46052704-46052443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               76, 17
               

               Conread position:
               243-501
               

               Cow position:
               chr2:46227671-46227403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               11, 48
               

               Conread position:
               243-502
               

               Cow position:
               chr2:75600915-75600668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               243-504
               

               Cow position:
               chr2:82580731-82580989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               142, 47
               

               Conread position:
               243-516
               

               Cow position:
               chr2:40257212-40257485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               70, 47
               

               Conread position:
               244-493
               

               Cow position:
               chr2:50449706-50449959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               103, 46
               

               Conread position:
               245-501
               

               Cow position:
               chr2:44051512-44051255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               5, 42
               

               Conread position:
               245-526
               

               Cow position:
               chr2:46162156-46161874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               257-502
               

               Cow position:
               chr2:45542211-45542450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 33
               

               Conread position:
               268-498
               

               Cow position:
               chr2:17841811-17842035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               115, 86
               

               Conread position:
               268-501
               

               Cow position:
               chr2:19494394-19494156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               79, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr2:21410409-21410161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr2:44170737-44170503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               90, 17
               

               Conread position:
               268-505
               

               Cow position:
               chr2:13684870-13684638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               115, 22
               

               Conread position:
               268-552
               

               Cow position:
               chr2:45597158-45596875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               79, 22
               

               Conread position:
               269-548
               

               Cow position:
               chr2:13672694-13672426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               74, 21
               

               Conread position:
               289-501
               

               Cow position:
               chr2:24007578-24007366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               104, 56
               

               Conread position:
               308-536
               

               Cow position:
               chr2:44222966-44222733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               41, 26
               

               Conread position:
               320-498
               

               Cow position:
               chr2:47893797-47893971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               320-501
               

               Cow position:
               chr2:45912510-45912689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               326-500
               

               Cow position:
               chr2:44217786-44217963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               15, 106
               

               Conread position:
               336-494
               

               Cow position:
               chr2:30144826-30144668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               360-501
               

               Cow position:
               chr2:39798328-39798184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               375-501
               

               Cow position:
               chr2:40466706-40466579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               232-497
               

               Cow position:
               chr20:32847597-32847333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               118, 18
               

               Conread position:
               232-501
               

               Cow position:
               chr20:28982954-28982686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               79, 10
               

               Conread position:
               243-489
               

               Cow position:
               chr20:2298548-2298788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               93, 47
               

               Conread position:
               245-480
               

               Cow position:
               chr20:3255279-3255046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 16
               

               Conread position:
               249-497
               

               Cow position:
               chr20:25009392-25009638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 36
               

               Conread position:
               250-486
               

               Cow position:
               chr20:2819788-2819546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               82, 40
               

               Conread position:
               268-499
               

               Cow position:
               chr20:12581734-12581967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               82, 22
               

               Conread position:
               268-499
               

               Cow position:
               chr20:14807105-14806875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               268-500
               

               Cow position:
               chr20:8556048-8556282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr20:18379599-18379363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               77, 22
               

               Conread position:
               268-502
               

               Cow position:
               chr20:5702944-5702709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               38, 22
               

               Conread position:
               268-512
               

               Cow position:
               chr20:28605428-28605184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               83, 29
               

               Conread position:
               289-501
               

               Cow position:
               chr20:32463323-32463534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 64
               

               Conread position:
               331-497
               

               Cow position:
               chr20:1009548-1009715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 144
               

               Conread position:
               217-498
               

               Cow position:
               chr21:22014480-22014197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               232-500
               

               Cow position:
               chr21:32559091-32559352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               232-501
               

               Cow position:
               chr21:11739842-11740113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               119, 10
               

               Conread position:
               243-496
               

               Cow position:
               chr21:47464851-47465108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               89, 47
               

               Conread position:
               250-495
               

               Cow position:
               chr21:29069061-29069315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               260-499
               

               Cow position:
               chr21:12104604-12104374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               123, 31
               

               Conread position:
               263-501
               

               Cow position:
               chr21:641832-641594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 33
               

               Conread position:
               268-469
               

               Cow position:
               chr21:24875595-24875391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               268-500
               

               Cow position:
               chr21:22861235-22861008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               211, 23
               

               Conread position:
               268-501
               

               Cow position:
               chr21:828967-829204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               79, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr21:8426686-8426454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               49, 81
               

               Conread position:
               287-501
               

               Cow position:
               chr21:643548-643332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               60, 35
               

               Conread position:
               296-501
               

               Cow position:
               chr21:9990727-9990518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 84
               

               Conread position:
               317-501
               

               Cow position:
               chr21:5392341-5392530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               350-501
               

               Cow position:
               chr21:29214001-29214151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 133
               

               Conread position:
               350-501
               

               Cow position:
               chr21:38121260-38121107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               350-536
               

               Cow position:
               chr21:20183230-20183044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 121
               

               Conread position:
               218-468
               

               Cow position:
               chr22:4164200-4163952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               127, 23
               

               Conread position:
               225-501
               

               Cow position:
               chr22:4060732-4061005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               129, 32
               

               Conread position:
               233-500
               

               Cow position:
               chr22:4563566-4563303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               101, 17
               

               Conread position:
               242-498
               

               Cow position:
               chr22:2100746-2101003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               243-480
               

               Cow position:
               chr22:14141140-14141381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               104, 42
               

               Conread position:
               243-501
               

               Cow position:
               chr22:17852437-17852694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               111, 47
               

               Conread position:
               244-501
               

               Cow position:
               chr22:44717920-44717653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               103, 46
               

               Conread position:
               245-456
               

               Cow position:
               chr22:16813995-16813783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               246-501
               

               Cow position:
               chr22:13957445-13957706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               266-475
               

               Cow position:
               chr22:43398177-43397968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               89, 28
               

               Conread position:
               268-496
               

               Cow position:
               chr22:42635256-42635489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               268-501
               

               Cow position:
               chr22:15567846-15568077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               109, 22
               

               Conread position:
               272-501
               

               Cow position:
               chr22:29289977-29290200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               45, 18
               

               Conread position:
               294-501
               

               Cow position:
               chr22:15039033-15039243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               57, 177
               

               Conread position:
               296-501
               

               Cow position:
               chr22:4119414-4119623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               349-499
               

               Cow position:
               chr22:17152770-17152622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               34, 129
               

               Conread position:
               210-501
               

               Cow position:
               chr23:12363375-12363672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               14, 84
               

               Conread position:
               231-446
               

               Cow position:
               chr23:27849213-27848997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               234-501
               

               Cow position:
               chr23:5426652-5426377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               113, 16
               

               Conread position:
               243-501
               

               Cow position:
               chr23:1883602-1883339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               12, 50
               

               Conread position:
               251-477
               

               Cow position:
               chr23:22587078-22586850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               9, 42
               

               Conread position:
               252-499
               

               Cow position:
               chr23:5732734-5732498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               131, 8
               

               Conread position:
               268-501
               

               Cow position:
               chr23:2501675-2501908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               90, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr23:16880988-16881216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               115, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr23:21452550-21452785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 49
               

               Conread position:
               268-501
               

               Cow position:
               chr23:24966279-24966518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               45, 22
               

               Conread position:
               350-495
               

               Cow position:
               chr23:5707091-5706946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               32, 134
               

               Conread position:
               208-505
               

               Cow position:
               chr24:230492-230192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               133, 52
               

               Conread position:
               209-501
               

               Cow position:
               chr24:5142149-5141864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               133, 32
               

               Conread position:
               218-501
               

               Cow position:
               chr24:37823732-37823448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               16, 78
               

               Conread position:
               235-501
               

               Cow position:
               chr24:37974797-37975063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               115, 7
               

               Conread position:
               243-501
               

               Cow position:
               chr24:30313850-30314109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 17
               

               Conread position:
               243-518
               

               Cow position:
               chr24:27713231-27713504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               117, 17
               

               Conread position:
               260-518
               

               Cow position:
               chr24:31816738-31816479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               92, 20
               

               Conread position:
               262-501
               

               Cow position:
               chr24:37650836-37650591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               54, 28
               

               Conread position:
               268-499
               

               Cow position:
               chr24:27844378-27844608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               268-502
               

               Cow position:
               chr24:11887308-11887077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               77, 12
               

               Conread position:
               299-501
               

               Cow position:
               chr24:2402246-2402448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               318-501
               

               Cow position:
               chr24:39791647-39791459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               204-479
               

               Cow position:
               chr25:11432710-11432982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               231-501
               

               Cow position:
               chr25:4521632-4521894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               122, 17
               

               Conread position:
               259-501
               

               Cow position:
               chr25:23244818-23245060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               92, 31
               

               Conread position:
               262-486
               

               Cow position:
               chr25:22348275-22348507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 28
               

               Conread position:
               262-501
               

               Cow position:
               chr25:19363877-19364118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               268-466
               

               Cow position:
               chr25:36873160-36873357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               115, 23
               

               Conread position:
               268-467
               

               Cow position:
               chr25:13223075-13222875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               268-501
               

               Cow position:
               chr25:18720950-18721180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               54, 22
               

               Conread position:
               269-468
               

               Cow position:
               chr25:9989926-9990136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               269-496
               

               Cow position:
               chr25:26306027-26306259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               289-501
               

               Cow position:
               chr25:11051682-11051470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               28, 86
               

               Conread position:
               312-495
               

               Cow position:
               chr25:16319005-16319195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               208-501
               

               Cow position:
               chr26:19636546-19636251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 73
               

               Conread position:
               231-501
               

               Cow position:
               chr26:647490-647765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               87, 59
               

               Conread position:
               232-501
               

               Cow position:
               chr26:20291463-20291731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               122, 10
               

               Conread position:
               232-502
               

               Cow position:
               chr26:26887907-26888173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               241-497
               

               Cow position:
               chr26:23925065-23924812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               73, 19
               

               Conread position:
               243-486
               

               Cow position:
               chr26:19446355-19446109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               71, 13
               

               Conread position:
               243-552
               

               Cow position:
               chr26:7314849-7314527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               70, 47
               

               Conread position:
               245-502
               

               Cow position:
               chr26:33201851-33202109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               268-505
               

               Cow position:
               chr26:32897684-32897914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               115, 22
               

               Conread position:
               288-501
               

               Cow position:
               chr26:8307350-8307563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               25, 190
               

               Conread position:
               320-466
               

               Cow position:
               chr26:33242033-33241884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               369-501
               

               Cow position:
               chr26:18651543-18651673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               399-501
               

               Cow position:
               chr26:5307205-5307102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               208-501
               

               Cow position:
               chr27:19685995-19685699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               7, 30
               

               Conread position:
               218-501
               

               Cow position:
               chr27:16284217-16284489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               165, 44
               

               Conread position:
               228-501
               

               Cow position:
               chr27:21669374-21669107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               70, 15
               

               Conread position:
               230-544
               

               Cow position:
               chr27:19508755-19509070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               86, 20
               

               Conread position:
               243-501
               

               Cow position:
               chr27:19387772-19388026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 40
               

               Conread position:
               243-505
               

               Cow position:
               chr27:30890051-30890303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 49
               

               Conread position:
               243-536
               

               Cow position:
               chr27:22171053-22171346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 48
               

               Conread position:
               260-500
               

               Cow position:
               chr27:26999654-26999410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               58, 23
               

               Conread position:
               262-501
               

               Cow position:
               chr27:14670609-14670376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               92, 28
               

               Conread position:
               268-471
               

               Cow position:
               chr27:7343651-7343445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               86, 12
               

               Conread position:
               268-471
               

               Cow position:
               chr27:15003202-15002995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               77, 22
               

               Conread position:
               268-497
               

               Cow position:
               chr27:426747-426978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               79, 23
               

               Conread position:
               271-501
               

               Cow position:
               chr27:23560249-23560018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               80, 19
               

               Conread position:
               323-499
               

               Cow position:
               chr27:4672842-4673029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               360-505
               

               Cow position:
               chr27:16625771-16625915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 44
               

               Conread position:
               231-501
               

               Cow position:
               chr28:5138779-5139047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               133, 19
               

               Conread position:
               232-480
               

               Cow position:
               chr28:5255088-5254844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               119, 11
               

               Conread position:
               232-501
               

               Cow position:
               chr28:3445261-3445533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               86, 18
               

               Conread position:
               237-501
               

               Cow position:
               chr28:13474514-13474250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               105, 85
               

               Conread position:
               241-501
               

               Cow position:
               chr28:22346232-22345968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               243-501
               

               Cow position:
               chr28:4013292-4013036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               108, 47
               

               Conread position:
               243-505
               

               Cow position:
               chr28:25129093-25128829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               104, 48
               

               Conread position:
               244-501
               

               Cow position:
               chr28:4159173-4158904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 47
               

               Conread position:
               249-501
               

               Cow position:
               chr28:3023713-3023966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               106, 94
               

               Conread position:
               260-469
               

               Cow position:
               chr28:29850630-29850835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               123, 30
               

               Conread position:
               268-501
               

               Cow position:
               chr28:5684884-5684655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               88, 23
               

               Conread position:
               268-505
               

               Cow position:
               chr28:22332714-22332480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               287-500
               

               Cow position:
               chr28:16346370-16346582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               64, 30
               

               Conread position:
               287-501
               

               Cow position:
               chr28:25057125-25056916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               49, 69
               

               Conread position:
               320-498
               

               Cow position:
               chr28:5204331-5204145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               334-540
               

               Cow position:
               chr28:4438825-4438612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               49, 26
               

               Conread position:
               350-501
               

               Cow position:
               chr28:16245965-16246119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               37, 58
               

               Conread position:
               218-489
               

               Cow position:
               chr29:23824978-23825260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               19, 78
               

               Conread position:
               232-501
               

               Cow position:
               chr29:36531081-36530808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 59
               

               Conread position:
               268-501
               

               Cow position:
               chr29:34358800-34359038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               46, 12
               

               Conread position:
               320-501
               

               Cow position:
               chr29:23220377-23220559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               26, 62
               

               Conread position:
               322-501
               

               Cow position:
               chr29:38978658-38978472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               29, 66
               

               Conread position:
               218-501
               

               Cow position:
               chr3:22165211-22165497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               129, 42
               

               Conread position:
               232-501
               

               Cow position:
               chr3:60264532-60264797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               119, 17
               

               Conread position:
               234-523
               

               Cow position:
               chr3:64197014-64196719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               117, 56
               

               Conread position:
               235-501
               

               Cow position:
               chr3:478636-478880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               240, 55
               

               Conread position:
               242-501
               

               Cow position:
               chr3:75080934-75080688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               243-505
               

               Cow position:
               chr3:69785437-69785711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               15, 50
               

               Conread position:
               245-501
               

               Cow position:
               chr3:59605021-59604765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               258-486
               

               Cow position:
               chr3:18607828-18607604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               53, 32
               

               Conread position:
               262-501
               

               Cow position:
               chr3:3883659-3883898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 28
               

               Conread position:
               266-505
               

               Cow position:
               chr3:74079481-74079722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               61, 24
               

               Conread position:
               268-501
               

               Cow position:
               chr3:19586019-19585782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               53, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr3:31349953-31350185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               117, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr3:44932667-44932433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr3:55189595-55189836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               45, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr3:78077345-78077110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               268-522
               

               Cow position:
               chr3:10668724-10668980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 22
               

               Conread position:
               270-498
               

               Cow position:
               chr3:61224596-61224824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               65, 20
               

               Conread position:
               270-499
               

               Cow position:
               chr3:78092358-78092591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               287-499
               

               Cow position:
               chr3:10958104-10958320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               29, 72
               

               Conread position:
               295-501
               

               Cow position:
               chr3:19626378-19626589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               77, 27
               

               Conread position:
               317-499
               

               Cow position:
               chr3:56059915-56059730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 16
               

               Conread position:
               221-501
               

               Cow position:
               chr4:23846835-23847111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 66
               

               Conread position:
               224-501
               

               Cow position:
               chr4:31136970-31136688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               118, 67
               

               Conread position:
               231-501
               

               Cow position:
               chr4:59277266-59277543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               86, 59
               

               Conread position:
               242-501
               

               Cow position:
               chr4:8182435-8182703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 35
               

               Conread position:
               243-500
               

               Cow position:
               chr4:21874372-21874110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               104, 13
               

               Conread position:
               260-498
               

               Cow position:
               chr4:48486175-48485931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               87, 30
               

               Conread position:
               262-506
               

               Cow position:
               chr4:38935535-38935288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               51, 19
               

               Conread position:
               268-462
               

               Cow position:
               chr4:34653704-34653894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               115, 22
               

               Conread position:
               268-487
               

               Cow position:
               chr4:38209804-38210024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               86, 23
               

               Conread position:
               268-498
               

               Cow position:
               chr4:20026934-20027166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               268-498
               

               Cow position:
               chr4:52831844-52832079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               43, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr4:51728245-51728013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               115, 22
               

               Conread position:
               268-502
               

               Cow position:
               chr4:28771898-28772136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 22
               

               Conread position:
               268-502
               

               Cow position:
               chr4:38156922-38157155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               46, 22
               

               Conread position:
               268-516
               

               Cow position:
               chr4:13344707-13344456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               86, 22
               

               Conread position:
               287-517
               

               Cow position:
               chr4:17851104-17851333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               100, 17
               

               Conread position:
               317-501
               

               Cow position:
               chr4:42921741-42921916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               320-501
               

               Cow position:
               chr4:38952665-38952489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               65, 25
               

               Conread position:
               229-501
               

               Cow position:
               chr5:63192510-63192772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               249, 21
               

               Conread position:
               231-499
               

               Cow position:
               chr5:57074097-57074362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               93, 25
               

               Conread position:
               232-499
               

               Cow position:
               chr5:59626729-59627002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 59
               

               Conread position:
               239-503
               

               Cow position:
               chr5:17086782-17087055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               58, 51
               

               Conread position:
               243-500
               

               Cow position:
               chr5:30233142-30232876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 48
               

               Conread position:
               243-501
               

               Cow position:
               chr5:21617683-21617427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               84, 13
               

               Conread position:
               243-501
               

               Cow position:
               chr5:57934892-57935139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               136, 17
               

               Conread position:
               243-501
               

               Cow position:
               chr5:65941022-65941282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               104, 17
               

               Conread position:
               244-501
               

               Cow position:
               chr5:20288028-20288294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               66, 46
               

               Conread position:
               244-501
               

               Cow position:
               chr5:26548911-26549172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               11, 48
               

               Conread position:
               248-502
               

               Cow position:
               chr5:40109710-40109460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               87, 43
               

               Conread position:
               250-501
               

               Cow position:
               chr5:30628929-30629189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               85, 40
               

               Conread position:
               260-501
               

               Cow position:
               chr5:66257848-66257608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               262-521
               

               Cow position:
               chr5:66466525-66466268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               66, 17
               

               Conread position:
               268-498
               

               Cow position:
               chr5:69099925-69099691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr5:56071064-56070826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               50, 23
               

               Conread position:
               317-501
               

               Cow position:
               chr5:61102866-61102684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 17
               

               Conread position:
               349-551
               

               Cow position:
               chr5:35982615-35982822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               34, 162
               

               Conread position:
               220-501
               

               Cow position:
               chr6:11192216-11192483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               256, 36
               

               Conread position:
               231-497
               

               Cow position:
               chr6:19264247-19264508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               106, 11
               

               Conread position:
               232-501
               

               Cow position:
               chr6:61269572-61269294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               56, 129
               

               Conread position:
               242-479
               

               Cow position:
               chr6:29485328-29485087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               102, 48
               

               Conread position:
               243-500
               

               Cow position:
               chr6:2078570-2078835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               243-501
               

               Cow position:
               chr6:31535329-31535587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               83, 42
               

               Conread position:
               250-499
               

               Cow position:
               chr6:10105746-10105995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               104, 29
               

               Conread position:
               259-501
               

               Cow position:
               chr6:51581027-51581271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               83, 34
               

               Conread position:
               266-496
               

               Cow position:
               chr6:36203042-36202807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               268-500
               

               Cow position:
               chr6:46859951-46860183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               86, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr6:52478192-52478430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               79, 22
               

               Conread position:
               269-501
               

               Cow position:
               chr6:32287849-32287622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               77, 21
               

               Conread position:
               272-502
               

               Cow position:
               chr6:32122110-32121888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               106, 18
               

               Conread position:
               280-501
               

               Cow position:
               chr6:60468443-60468221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               38, 10
               

               Conread position:
               287-501
               

               Cow position:
               chr6:61524003-61524223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               350-501
               

               Cow position:
               chr6:32853322-32853170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               33, 62
               

               Conread position:
               381-501
               

               Cow position:
               chr6:61608615-61608495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               217-480
               

               Cow position:
               chr7:36665598-36665333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               96, 43
               

               Conread position:
               220-535
               

               Cow position:
               chr7:53785722-53786022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               167, 17
               

               Conread position:
               231-496
               

               Cow position:
               chr7:20535129-20534861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               91, 29
               

               Conread position:
               231-501
               

               Cow position:
               chr7:26263398-26263673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               111, 18
               

               Conread position:
               242-498
               

               Cow position:
               chr7:50065870-50066130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               97, 48
               

               Conread position:
               243-502
               

               Cow position:
               chr7:4765085-4764829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               142, 47
               

               Conread position:
               243-519
               

               Cow position:
               chr7:33393554-33393273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 48
               

               Conread position:
               244-475
               

               Cow position:
               chr7:12494875-12495109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               17, 47
               

               Conread position:
               244-497
               

               Cow position:
               chr7:15559931-15559674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 48
               

               Conread position:
               244-501
               

               Cow position:
               chr7:35274841-35275094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               235, 46
               

               Conread position:
               246-499
               

               Cow position:
               chr7:49751373-49751115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 46
               

               Conread position:
               256-501
               

               Cow position:
               chr7:14317172-14316927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               95, 34
               

               Conread position:
               259-501
               

               Cow position:
               chr7:27079856-27079613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               77, 31
               

               Conread position:
               266-500
               

               Cow position:
               chr7:53053182-53053418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               268-484
               

               Cow position:
               chr7:12488645-12488437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               115, 22
               

               Conread position:
               268-488
               

               Cow position:
               chr7:26871769-26871994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               45, 25
               

               Conread position:
               268-501
               

               Cow position:
               chr7:35300200-35300433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               82, 22
               

               Conread position:
               268-505
               

               Cow position:
               chr7:8658735-8658496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               77, 22
               

               Conread position:
               287-483
               

               Cow position:
               chr7:11487468-11487668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 126
               

               Conread position:
               289-501
               

               Cow position:
               chr7:56886311-56886523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               296-501
               

               Cow position:
               chr7:48715051-48714838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               317-523
               

               Cow position:
               chr7:598415-598207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               34, 200
               

               Conread position:
               350-501
               

               Cow position:
               chr7:48243809-48243659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 103
               

               Conread position:
               375-499
               

               Cow position:
               chr7:28544289-28544164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               230-480
               

               Cow position:
               chr8:20107571-20107814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               121, 18
               

               Conread position:
               232-500
               

               Cow position:
               chr8:8189833-8190110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               236-494
               

               Cow position:
               chr8:55885195-55884930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 55
               

               Conread position:
               237-501
               

               Cow position:
               chr8:10971054-10970785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               80, 12
               

               Conread position:
               243-501
               

               Cow position:
               chr8:31985473-31985216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               140, 28
               

               Conread position:
               246-500
               

               Cow position:
               chr8:42762222-42762475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               108, 44
               

               Conread position:
               262-501
               

               Cow position:
               chr8:32620783-32621037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               21, 62
               

               Conread position:
               268-471
               

               Cow position:
               chr8:3914788-3914575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               268-499
               

               Cow position:
               chr8:41219519-41219282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               74, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr8:5437951-5437716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr8:6073630-6073863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 84
               

               Conread position:
               268-501
               

               Cow position:
               chr8:39807790-39807545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 22
               

               Conread position:
               268-501
               

               Cow position:
               chr8:47170136-47169897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               70, 22
               

               Conread position:
               268-502
               

               Cow position:
               chr8:55716941-55716706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               79, 22
               

               Conread position:
               268-505
               

               Cow position:
               chr8:33406665-33406900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               67, 22
               

               Conread position:
               268-520
               

               Cow position:
               chr8:37559314-37559066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               115, 22
               

               Conread position:
               273-501
               

               Cow position:
               chr8:55897631-55897860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 17
               

               Conread position:
               285-497
               

               Cow position:
               chr8:24371544-24371758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               65, 88
               

               Conread position:
               287-499
               

               Cow position:
               chr8:33640536-33640319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               60, 35
               

               Conread position:
               350-499
               

               Cow position:
               chr8:6484825-6484976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               207-502
               

               Cow position:
               chr9:20090846-20091133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               51, 35
               

               Conread position:
               217-513
               

               Cow position:
               chr9:43757346-43757638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               218-494
               

               Cow position:
               chr9:41728060-41728339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               124, 72
               

               Conread position:
               225-501
               

               Cow position:
               chr9:60395239-60394966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               129, 35
               

               Conread position:
               229-488
               

               Cow position:
               chr9:45285724-45285462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               89, 21
               

               Conread position:
               232-501
               

               Cow position:
               chr9:25556800-25557060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               151, 23
               

               Conread position:
               234-501
               

               Cow position:
               chr9:13169854-13169577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               16, 61
               

               Conread position:
               242-501
               

               Cow position:
               chr9:18380693-18380947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               109, 20
               

               Conread position:
               243-468
               

               Cow position:
               chr9:57131320-57131548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               12, 42
               

               Conread position:
               243-483
               

               Cow position:
               chr9:4341331-4341091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               70, 47
               

               Conread position:
               243-501
               

               Cow position:
               chr9:37198952-37199208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               99, 47
               

               Conread position:
               244-487
               

               Cow position:
               chr9:63361886-63361648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               10, 47
               

               Conread position:
               260-501
               

               Cow position:
               chr9:17840837-17840590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               58, 30
               

               Conread position:
               268-501
               

               Cow position:
               chr9:34958202-34957968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               268-505
               

               Cow position:
               chr9:34286648-34286892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               74, 22
               

               Conread position:
               287-501
               

               Cow position:
               chr9:33120023-33119801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 47
               

               Conread position:
               289-536
               

               Cow position:
               chr9:26345092-26344849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               301-501
               

               Cow position:
               chr9:31079198-31078998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               50, 89
               
219-480UCSC Genome Browser
               Conread position:
               
               

               Cow position:
               chrX:27145856-27145595 (view  custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               132, 71
               
224-468UCSC Genome Browser
               
               
               
Conread position: 

               
               
               
Cow position: chrX:39290605-39290362 (view  custom track)

               
               
               
Alignm length: 249

               
               
               
Alignm identity: 163

               
               
               
Alignm E-value: 4e-21

               
               
               
Alignm gaps (pig, cow): 130, 25
229-501UCSC Genome Browser
               
               
               
Conread position: 

               
               
               
Cow position: chrX:22115070-22115345 (view  custom track)

               
               
               
Alignm length: 282

               
               
               
Alignm identity: 187

               
               
               
Alignm E-value: 2e-23

               
               
               
Alignm gaps (pig, cow): 116, 31

               
               
               Conread position:232-471
               
               
               Cow position:chrX:11656322-11656081 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:162
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):115, 58

               
               
               Conread position:232-476
               
               
               Cow position:chrX:2936196-2935952 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:171
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):110, 18

               
               
               Conread position:235-496
               
               
               Cow position:chrX:43115391-43115125 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):26, 56

               
               
               Conread position:239-499
               
               
               Cow position:chrX:9251926-9252189 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):108, 51

               
               
               Conread position:242-501
               
               
               Cow position:chrX:27306670-27306423 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:182
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):145, 12

               
               
               Conread position:242-501
               
               
               Cow position:chrX:34504818-34505080 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:176
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):19, 49

               
               
               Conread position:242-501
               
               
               Cow position:chrX:42927597-42927848 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:176
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):109, 18

               
               
               Conread position:243-499
               
               
               Cow position:chrX:20584547-20584297 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:179
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):12, 49

               
               
               Conread position:243-499
               
               
               Cow position:chrX:40685097-40685358 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:176
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):93, 17

               
               
               Conread position:249-498
               
               
               Cow position:chrX:34836845-34837084 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:172
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):87, 31

               
               
               Conread position:259-501
               
               
               Cow position:chrX:31436686-31436447 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:166
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):77, 31

               
               
               Conread position:262-499
               
               
               Cow position:chrX:14883743-14883985 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:169
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):92, 21

               
               
               Conread position:266-505
               
               
               Cow position:chrX:22392778-22393019 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:164
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):85, 24

               
               
               Conread position:268-484
               
               
               Cow position:chrX:12972886-12972668 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:152
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):83, 22

               
               
               Conread position:268-501
               
               
               Cow position:chrX:1466371-1466132 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:179
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):22, 56

               
               
               Conread position:268-501
               
               
               Cow position:chrX:19394763-19394523 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:162
               
               
               Alignm E-value:5e-23
               
               
               Alignm gaps (pig, cow):57, 22

               
               
               Conread position:269-501
               
               
               Cow position:chrX:29050449-29050218 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:163
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):15, 26

               
               
               Conread position:270-501
               
               
               Cow position:chrX:5118292-5118532 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:166
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):62, 20

               
               
               Conread position:270-501
               
               
               Cow position:chrX:37780906-37781140 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:170
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):41, 11

               
               
               Conread position:287-501
               
               
               Cow position:chrX:34532708-34532490 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:145
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):48, 0

               
               
               Conread position:375-501
               
               
               Cow position:chrX:46429722-46429851 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:130
               
               
               Alignm identity:101
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):8, 0
Conread position:	209-501
Cow position:	chr1:54267695-54267983 (view UCSC Genome Browser custom track)
Alignm length:	298
Alignm identity:	200
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	24, 53
Conread position:	219-500
Cow position:	chr1:86682336-86682610 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	193
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	142, 23
Conread position:	225-505
Cow position:	chr1:5596984-5597263 (view UCSC Genome Browser custom track)
Alignm length:	287
Alignm identity:	186
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	129, 65
Conread position:	227-501
Cow position:	chr1:78811264-78810988 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	177
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	129, 63
Conread position:	231-501
Cow position:	chr1:81290725-81290454 (view UCSC Genome Browser custom track)
Alignm length:	277
Alignm identity:	188
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	111, 19
Conread position:	232-466
Cow position:	chr1:45315411-45315652 (view UCSC Genome Browser custom track)
Alignm length:	244
Alignm identity:	164
Alignm E-value:	9e-22
Alignm gaps (pig, cow):	86, 18
Conread position:	235-484
Cow position:	chr1:41027290-41027042 (view UCSC Genome Browser custom track)
Alignm length:	252
Alignm identity:	164
Alignm E-value:	9e-22
Alignm gaps (pig, cow):	116, 55
Conread position:	244-501
Cow position:	chr1:1980901-1981164 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	175
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	74, 36
Conread position:	245-501
Cow position:	chr1:61885121-61884863 (view UCSC Genome Browser custom track)
Alignm length:	262
Alignm identity:	176
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	9, 46
Conread position:	259-501
Cow position:	chr1:56618462-56618700 (view UCSC Genome Browser custom track)
Alignm length:	246
Alignm identity:	171
Alignm E-value:	6e-28
Alignm gaps (pig, cow):	54, 33
Conread position:	262-501
Cow position:	chr1:58754607-58754845 (view UCSC Genome Browser custom track)
Alignm length:	244
Alignm identity:	170
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	93, 28
Conread position:	268-468
Cow position:	chr1:42887095-42887295 (view UCSC Genome Browser custom track)
Alignm length:	202
Alignm identity:	136
Alignm E-value:	9e-22
Alignm gaps (pig, cow):	114, 22
Conread position:	268-501
Cow position:	chr1:71078777-71079007 (view UCSC Genome Browser custom track)
Alignm length:	236
Alignm identity:	157
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	83, 22
Conread position:	276-501
Cow position:	chr1:87197997-87197766 (view UCSC Genome Browser custom track)
Alignm length:	234
Alignm identity:	162
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	80, 14
Conread position:	316-499
Cow position:	chr1:80584564-80584383 (view UCSC Genome Browser custom track)
Alignm length:	185
Alignm identity:	129
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	67, 27
Conread position:	348-497
Cow position:	chr1:102529758-102529902 (view UCSC Genome Browser custom track)
Alignm length:	150
Alignm identity:	112
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	33, 0
Conread position:	228-501
Cow position:	chr10:43586092-43586367 (view UCSC Genome Browser custom track)
Alignm length:	284
Alignm identity:	198
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	85, 39
Conread position:	232-501
Cow position:	chr10:14947443-14947180 (view UCSC Genome Browser custom track)
Alignm length:	276
Alignm identity:	188
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	22, 9
Conread position:	233-500
Cow position:	chr10:61509757-61510019 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	176
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	150, 57
Conread position:	239-500
Cow position:	chr10:46327875-46327610 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	177
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	22, 52