Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8052N11.5 |
| Conread position: | 699-924 |
| Cow position: | chr1:60849398-60849179 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 70, 100 |
| Conread position: | 1-88 |
| Cow position: | chr10:52357862-52357949 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 77 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 87-230 |
| Cow position: | chr10:52365704-52365847 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 135 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 224-295 |
| Cow position: | chr10:52367832-52367903 (view UCSC Genome Browser custom track) |
| Alignm length: | 72 |
| Alignm identity: | 70 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-530 |
| Cow position: | chr10:52373307-52373543 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 557-924 |
| Cow position: | chr10:52373686-52374054 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 73 |
| Conread position: | 682-923 |
| Cow position: | chr10:56092312-56092543 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 682-924 |
| Cow position: | chr10:42051541-42051794 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 91, 56 |
| Conread position: | 700-924 |
| Cow position: | chr10:25691225-25691453 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 69, 139 |
| Conread position: | 711-924 |
| Cow position: | chr10:40604918-40605142 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 58, 134 |
| Conread position: | 679-924 |
| Cow position: | chr11:22349889-22349645 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 54, 108 |
| Conread position: | 682-923 |
| Cow position: | chr11:39631304-39631060 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 87, 25 |
| Conread position: | 716-924 |
| Cow position: | chr11:52243461-52243254 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 53, 84 |
| Conread position: | 682-924 |
| Cow position: | chr16:12381063-12381314 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 683-924 |
| Cow position: | chr16:21010905-21011152 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 88, 132 |
| Conread position: | 671-922 |
| Cow position: | chr17:16670344-16670595 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 98, 11 |
| Conread position: | 680-924 |
| Cow position: | chr17:20364114-20364361 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 682-923 |
| Cow position: | chr18:37134536-37134299 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 87, 117 |
| Conread position: | 682-924 |
| Cow position: | chr19:30462587-30462834 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 95, 177 |
| Conread position: | 652-923 |
| Cow position: | chr2:16782948-16783212 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 117, 30 |
| Conread position: | 682-924 |
| Cow position: | chr2:59136242-59135990 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 86, 36 |
| Conread position: | 685-924 |
| Cow position: | chr2:42798055-42797824 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 105 |
| Conread position: | 686-923 |
| Cow position: | chr2:62612506-62612758 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 696-924 |
| Cow position: | chr2:29186810-29186575 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 679-923 |
| Cow position: | chr20:14843371-14843121 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 89, 145 |
| Conread position: | 679-924 |
| Cow position: | chr21:35084116-35083880 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 27 |
| Conread position: | 682-924 |
| Cow position: | chr21:39094881-39095132 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 679-920 |
| Cow position: | chr24:30212197-30212439 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 115 |
| Conread position: | 656-924 |
| Cow position: | chr26:4355560-4355823 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 682-924 |
| Cow position: | chr26:10594042-10594286 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 87, 122 |
| Conread position: | 682-852 |
| Cow position: | chr28:13467739-13467909 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 61 |
| Conread position: | 684-924 |
| Cow position: | chr28:11008324-11008567 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 85, 57 |
| Conread position: | 696-924 |
| Cow position: | chr29:19752878-19753110 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 73, 118 |
| Conread position: | 682-922 |
| Cow position: | chr3:57970851-57971087 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 87, 116 |
| Conread position: | 689-921 |
| Cow position: | chr3:15352994-15353229 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 80, 27 |
| Conread position: | 667-924 |
| Cow position: | chr6:9719730-9719467 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 102, 12 |
| Conread position: | 679-924 |
| Cow position: | chr6:8551014-8550766 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 135 |
| Conread position: | 682-924 |
| Cow position: | chr6:29114996-29115239 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 110, 13 |
| Conread position: | 682-924 |
| Cow position: | chr6:67009961-67010211 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 63, 138 |
| Conread position: | 670-924 |
| Cow position: | chr7:30702826-30703072 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 97, 12 |
| Conread position: | 674-911 |
| Cow position: | chr7:37174677-37174913 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 29, 126 |
| Conread position: | 682-923 |
| Cow position: | chr7:3763076-3763315 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 86, 116 |
| Conread position: | 691-924 |
| Cow position: | chr9:18564587-18564344 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 19, 64 |
| Conread position: | 679-924 |
| Cow position: | chrX:29188802-29188557 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 90, 28 |
| Conread position: | 682-922 |
| Cow position: | chrX:41017202-41016960 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 683-911 |
| Cow position: | chrX:29199779-29200011 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 86, 112 |