Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8053E16.5 |
| Conread position: | 71-262 |
| Cow position: | chr10:15169990-15170185 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 144, 23 |
| Conread position: | 71-268 |
| Cow position: | chr10:36408894-36409094 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 72-258 |
| Cow position: | chr10:37279633-37279815 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 142, 12 |
| Conread position: | 278-395 |
| Cow position: | chr10:37279854-37279972 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 71-262 |
| Cow position: | chr12:8625442-8625635 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 147, 81 |
| Conread position: | 71-409 |
| Cow position: | chr16:5730895-5731246 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 147, 24 |
| Conread position: | 71-708 |
| Cow position: | chr16:52508404-52507754 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 18 |
| Conread position: | 101-675 |
| Cow position: | chr16:13518834-13518237 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 55 |
| Conread position: | 1-610 |
| Cow position: | chr18:38661290-38660664 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 20 |
| Conread position: | 71-267 |
| Cow position: | chr18:25064119-25064319 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 47, 171 |
| Conread position: | 73-406 |
| Cow position: | chr19:10740792-10741140 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 43, 275 |
| Conread position: | 68-241 |
| Cow position: | chr2:40774291-40774117 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 139 |
| Conread position: | 71-271 |
| Cow position: | chr2:37356030-37355833 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 147, 93 |
| Conread position: | 82-262 |
| Cow position: | chr2:9684946-9685118 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 133, 69 |
| Conread position: | 101-350 |
| Cow position: | chr2:57837631-57837875 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 191 |
| Conread position: | 235-395 |
| Cow position: | chr2:1463554-1463711 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 16 |
| Conread position: | 261-405 |
| Cow position: | chr2:37355822-37355676 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 322-549 |
| Cow position: | chr2:36904454-36904225 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 104, 90 |
| Conread position: | 480-696 |
| Cow position: | chr2:57838038-57838241 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 155, 120 |
| Conread position: | 71-431 |
| Cow position: | chr20:29850723-29850359 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 105, 170 |
| Conread position: | 270-673 |
| Cow position: | chr20:5342623-5343024 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 178 |
| Conread position: | 267-676 |
| Cow position: | chr21:11021358-11020960 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 71-267 |
| Cow position: | chr22:20328444-20328642 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 87-404 |
| Cow position: | chr22:33460182-33460517 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 131, 25 |
| Conread position: | 71-267 |
| Cow position: | chr23:14856378-14856578 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 251-398 |
| Cow position: | chr23:14856583-14856733 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 270-403 |
| Cow position: | chr24:23214066-23213934 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 33, 21 |
| Conread position: | 65-261 |
| Cow position: | chr25:18414117-18414318 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 7, 105 |
| Conread position: | 103-267 |
| Cow position: | chr26:16214029-16214196 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 438-708 |
| Cow position: | chr27:12995176-12994910 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 115 |
| Conread position: | 71-221 |
| Cow position: | chr29:3234240-3234090 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 141, 5 |
| Conread position: | 68-215 |
| Cow position: | chr3:53404647-53404794 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 49 |
| Conread position: | 68-261 |
| Cow position: | chr3:19235491-19235298 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 148, 120 |
| Conread position: | 267-560 |
| Cow position: | chr3:65862615-65862325 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 123 |
| Conread position: | 271-445 |
| Cow position: | chr5:32680681-32680508 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 71-267 |
| Cow position: | chr6:24662829-24663027 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 145, 184 |
| Conread position: | 98-625 |
| Cow position: | chr6:472570-473119 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 81 |
| Conread position: | 269-406 |
| Cow position: | chr6:49423566-49423700 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 114, 28 |
| Conread position: | 317-708 |
| Cow position: | chr6:24663311-24663681 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 98 |
| Conread position: | 71-348 |
| Cow position: | chr7:20381028-20381306 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 49 |
| Conread position: | 271-613 |
| Cow position: | chr7:40496800-40496448 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 217 |
| Conread position: | 349-708 |
| Cow position: | chr7:8393524-8393169 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 47 |
| Conread position: | 71-384 |
| Cow position: | chr8:23495471-23495796 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 197, 142 |
| Conread position: | 58-262 |
| Cow position: | chr9:62117484-62117283 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 387-708 |
| Cow position: | chr9:62117111-62116792 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 38, 235 |
| Conread position: | 471-702 |
| Cow position: | chrX:38741888-38742113 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 22 |