Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8059M05.5 |
| Conread position: | 729-869 |
| Cow position: | chr1:40993318-40993459 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 780-888 |
| Cow position: | chr1:93025768-93025657 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 732-893 |
| Cow position: | chr10:16900712-16900885 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 707-882 |
| Cow position: | chr11:85265440-85265261 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 729-882 |
| Cow position: | chr12:39287999-39288145 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 24 |
| Conread position: | 707-868 |
| Cow position: | chr13:17694583-17694419 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 729-890 |
| Cow position: | chr13:53716316-53716478 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 64, 26 |
| Conread position: | 721-882 |
| Cow position: | chr15:39797767-39797603 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 729-882 |
| Cow position: | chr15:13026574-13026416 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-313 |
| Cow position: | chr16:21652070-21651757 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 148 |
| Conread position: | 1-316 |
| Cow position: | chr16:21931254-21930957 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 30 |
| Conread position: | 415-618 |
| Cow position: | chr16:21930697-21930495 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 54 |
| Conread position: | 494-715 |
| Cow position: | chr16:21651336-21651111 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 707-878 |
| Cow position: | chr16:21937097-21936919 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 707-882 |
| Cow position: | chr16:21930284-21930104 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 69 |
| Conread position: | 729-881 |
| Cow position: | chr16:21658923-21658766 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 808-985 |
| Cow position: | chr16:21650495-21650317 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 1-397 |
| Cow position: | chr17:13331028-13331419 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 102 |
| Conread position: | 443-618 |
| Cow position: | chr17:13331491-13331670 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 707-883 |
| Cow position: | chr18:21317630-21317812 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 707-868 |
| Cow position: | chr19:47061542-47061712 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 70 |
| Conread position: | 712-885 |
| Cow position: | chr19:44336747-44336926 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 495-618 |
| Cow position: | chr20:13522949-13522827 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 69, 100 |
| Conread position: | 721-883 |
| Cow position: | chr21:48915017-48915179 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 47 |
| Conread position: | 725-879 |
| Cow position: | chr21:48607871-48608023 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 34 |
| Conread position: | 727-883 |
| Cow position: | chr24:37872447-37872606 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 728-883 |
| Cow position: | chr25:10147481-10147641 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 729-882 |
| Cow position: | chr26:22766976-22766823 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 712-882 |
| Cow position: | chr28:24301017-24300840 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 63 |
| Conread position: | 703-880 |
| Cow position: | chr3:74799856-74800038 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 45 |
| Conread position: | 707-885 |
| Cow position: | chr3:65291383-65291570 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 327-882 |
| Cow position: | chr4:28117830-28117256 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 364 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 142, 81 |
| Conread position: | 475-618 |
| Cow position: | chr4:64872758-64872615 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 92, 82 |
| Conread position: | 513-629 |
| Cow position: | chr5:22338462-22338580 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 61 |
| Conread position: | 729-891 |
| Cow position: | chr5:56261192-56261027 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 7-395 |
| Cow position: | chr6:64874246-64873863 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 715-882 |
| Cow position: | chr6:32919969-32919799 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 31 |
| Conread position: | 721-881 |
| Cow position: | chr6:3604402-3604235 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 721-881 |
| Cow position: | chr6:3606490-3606323 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 707-882 |
| Cow position: | chr8:51342043-51342225 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 755-871 |
| Cow position: | chr8:33169952-33170070 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 131-341 |
| Cow position: | chr9:9517133-9516925 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 707-884 |
| Cow position: | chr9:63843415-63843589 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 11 |
| Conread position: | 729-878 |
| Cow position: | chr9:9514473-9514321 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 33, 43 |
| Conread position: | 492-614 |
| Cow position: | chrX:28028053-28028178 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 7, 53 |
| Conread position: | 729-889 |
| Cow position: | chrX:40595127-40595288 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 31, 11 |