Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8059P21.3 |
| Conread position: | 166-406 |
| Cow position: | chr10:25478425-25478189 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 84, 39 |
| Conread position: | 180-337 |
| Cow position: | chr10:63835532-63835381 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 100, 52 |
| Conread position: | 180-345 |
| Cow position: | chr10:38577416-38577579 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 180-406 |
| Cow position: | chr10:6845554-6845330 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 155, 53 |
| Conread position: | 180-408 |
| Cow position: | chr10:59001416-59001641 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 69, 57 |
| Conread position: | 180-424 |
| Cow position: | chr10:46085378-46085134 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 53, 122 |
| Conread position: | 182-455 |
| Cow position: | chr10:4553025-4553300 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 33 |
| Conread position: | 184-393 |
| Cow position: | chr10:39453655-39453857 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 185-447 |
| Cow position: | chr10:25858860-25859126 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 64, 50 |
| Conread position: | 186-397 |
| Cow position: | chr10:3733684-3733894 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 203, 48 |
| Conread position: | 188-442 |
| Cow position: | chr10:53209980-53210233 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 42, 111 |
| Conread position: | 190-403 |
| Cow position: | chr10:47989263-47989059 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 194, 45 |
| Conread position: | 179-312 |
| Cow position: | chr11:50290247-50290376 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 180-403 |
| Cow position: | chr11:42393557-42393333 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 45, 130 |
| Conread position: | 180-410 |
| Cow position: | chr11:30535190-30534954 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 35 |
| Conread position: | 179-403 |
| Cow position: | chr13:22285073-22285294 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 70, 51 |
| Conread position: | 180-403 |
| Cow position: | chr13:27932939-27933162 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 47, 122 |
| Conread position: | 180-404 |
| Cow position: | chr13:13252170-13251945 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 56, 120 |
| Conread position: | 180-412 |
| Cow position: | chr13:17272422-17272650 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 206, 55 |
| Conread position: | 181-345 |
| Cow position: | chr13:46650165-46650002 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 50, 57 |
| Conread position: | 183-403 |
| Cow position: | chr13:11172872-11172642 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 51 |
| Conread position: | 180-325 |
| Cow position: | chr14:41674519-41674664 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 95 |
| Conread position: | 180-337 |
| Cow position: | chr14:25007403-25007252 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 180-345 |
| Cow position: | chr14:38308031-38308195 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 56, 118 |
| Conread position: | 180-400 |
| Cow position: | chr14:10054810-10054591 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 121 |
| Conread position: | 180-403 |
| Cow position: | chr14:18127196-18126974 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 180-314 |
| Cow position: | chr15:30763137-30763268 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 180-402 |
| Cow position: | chr15:15121617-15121836 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 69, 53 |
| Conread position: | 180-403 |
| Cow position: | chr15:7284724-7284946 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 54 |
| Conread position: | 171-403 |
| Cow position: | chr16:31349185-31348965 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 207, 62 |
| Conread position: | 172-402 |
| Cow position: | chr16:30517027-30517258 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 9, 62 |
| Conread position: | 180-402 |
| Cow position: | chr16:19909458-19909673 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 187-449 |
| Cow position: | chr16:31055841-31056102 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 145, 102 |
| Conread position: | 177-403 |
| Cow position: | chr17:34151553-34151781 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 58 |
| Conread position: | 180-359 |
| Cow position: | chr17:22572792-22572621 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 154, 55 |
| Conread position: | 182-403 |
| Cow position: | chr17:8532822-8533034 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 67, 23 |
| Conread position: | 169-306 |
| Cow position: | chr18:16301082-16301218 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 126, 68 |
| Conread position: | 177-361 |
| Cow position: | chr18:23457596-23457418 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 179-345 |
| Cow position: | chr18:4060150-4060312 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 180-442 |
| Cow position: | chr18:26002496-26002235 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 47, 33 |
| Conread position: | 182-364 |
| Cow position: | chr18:44465181-44464998 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 67, 120 |
| Conread position: | 191-403 |
| Cow position: | chr18:36802735-36802529 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 180-376 |
| Cow position: | chr19:13353802-13353612 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 164-397 |
| Cow position: | chr20:18612303-18612068 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 67, 8 |
| Conread position: | 169-397 |
| Cow position: | chr20:28061598-28061823 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 11 |
| Conread position: | 179-380 |
| Cow position: | chr20:22542556-22542760 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 52 |
| Conread position: | 181-402 |
| Cow position: | chr20:27834193-27834414 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 16 |
| Conread position: | 181-403 |
| Cow position: | chr20:32155282-32155067 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 55, 93 |
| Conread position: | 182-456 |
| Cow position: | chr20:5264678-5264953 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 120 |
| Conread position: | 171-408 |
| Cow position: | chr21:16547295-16547055 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 94, 64 |
| Conread position: | 180-335 |
| Cow position: | chr21:25010827-25010679 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 180-354 |
| Cow position: | chr21:32325243-32325415 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 124 |
| Conread position: | 180-403 |
| Cow position: | chr21:26877830-26877619 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 180-407 |
| Cow position: | chr21:47569854-47569632 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 150, 37 |
| Conread position: | 170-432 |
| Cow position: | chr22:24056845-24057107 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 79, 67 |
| Conread position: | 180-296 |
| Cow position: | chr22:21314468-21314353 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 180-345 |
| Cow position: | chr22:42695125-42695288 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 99, 55 |
| Conread position: | 180-403 |
| Cow position: | chr22:16332081-16332298 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 208, 57 |
| Conread position: | 180-403 |
| Cow position: | chr22:23791047-23791267 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 52 |
| Conread position: | 181-314 |
| Cow position: | chr22:27836640-27836508 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 182-406 |
| Cow position: | chr22:36258807-36259026 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 67, 51 |
| Conread position: | 171-403 |
| Cow position: | chr23:22370036-22370270 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 78, 145 |
| Conread position: | 180-364 |
| Cow position: | chr23:26134462-26134644 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 69, 51 |
| Conread position: | 180-403 |
| Cow position: | chr23:29025319-29025094 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 60, 119 |
| Conread position: | 180-403 |
| Cow position: | chr23:30579794-30579581 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 172, 55 |
| Conread position: | 182-343 |
| Cow position: | chr23:26110464-26110620 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 182-407 |
| Cow position: | chr23:14379719-14379507 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 179-400 |
| Cow position: | chr24:21704954-21705175 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 157, 56 |
| Conread position: | 180-406 |
| Cow position: | chr24:28948229-28948460 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 155, 51 |
| Conread position: | 182-397 |
| Cow position: | chr25:22188278-22188488 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 69, 25 |
| Conread position: | 172-303 |
| Cow position: | chr26:19438087-19437956 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 79, 65 |
| Conread position: | 177-358 |
| Cow position: | chr26:10834384-10834558 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 179-403 |
| Cow position: | chr26:26474099-26473882 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 210, 58 |
| Conread position: | 180-345 |
| Cow position: | chr26:18283847-18283682 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 11 |
| Conread position: | 180-403 |
| Cow position: | chr26:10407159-10407369 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 209, 17 |
| Conread position: | 180-404 |
| Cow position: | chr26:18715320-18715536 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 95, 51 |
| Conread position: | 180-406 |
| Cow position: | chr26:27506465-27506242 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 56, 115 |
| Conread position: | 180-416 |
| Cow position: | chr26:1471681-1471444 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 48, 122 |
| Conread position: | 180-403 |
| Cow position: | chr27:21171601-21171820 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 53 |
| Conread position: | 172-406 |
| Cow position: | chr28:3585302-3585067 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 61 |
| Conread position: | 172-433 |
| Cow position: | chr28:22841775-22841514 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 7, 133 |
| Conread position: | 177-401 |
| Cow position: | chr28:17657554-17657328 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 86, 57 |
| Conread position: | 177-403 |
| Cow position: | chr28:18532479-18532705 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 58 |
| Conread position: | 180-301 |
| Cow position: | chr28:23827765-23827644 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 180-410 |
| Cow position: | chr28:23093583-23093348 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 110, 23 |
| Conread position: | 181-301 |
| Cow position: | chr28:20304671-20304792 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 54 |
| Conread position: | 181-406 |
| Cow position: | chr28:1432836-1432622 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 208, 52 |
| Conread position: | 180-361 |
| Cow position: | chr29:40495062-40495241 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 69, 117 |
| Conread position: | 180-401 |
| Cow position: | chr29:31003669-31003889 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 107, 119 |
| Conread position: | 180-406 |
| Cow position: | chr29:24398301-24398079 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 155, 54 |
| Conread position: | 1-1054 |
| Cow position: | chr4:7818661-7817624 (view UCSC Genome Browser custom track) |
| Alignm length: | 1093 |
| Alignm identity: | 807 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 623, 53 |
| Conread position: | 180-288 |
| Cow position: | chr4:49273245-49273352 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 180-302 |
| Cow position: | chr4:28431865-28431746 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 59, 76 |
| Conread position: | 180-402 |
| Cow position: | chr4:38787372-38787598 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 99, 54 |
| Conread position: | 180-403 |
| Cow position: | chr4:9643285-9643068 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 152, 116 |
| Conread position: | 180-403 |
| Cow position: | chr4:28376517-28376298 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 210, 57 |
| Conread position: | 180-403 |
| Cow position: | chr4:54884621-54884398 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 180-414 |
| Cow position: | chr4:4203459-4203237 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 209, 66 |
| Conread position: | 182-403 |
| Cow position: | chr4:62844396-62844178 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 180, 53 |
| Conread position: | 184-405 |
| Cow position: | chr4:41660992-41660779 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 181, 50 |
| Conread position: | 177-313 |
| Cow position: | chr5:69640704-69640839 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 179-407 |
| Cow position: | chr5:19137408-19137636 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 167, 58 |
| Conread position: | 180-404 |
| Cow position: | chr5:48539843-48540063 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 209, 55 |
| Conread position: | 180-409 |
| Cow position: | chr5:29695871-29695640 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 76, 122 |
| Conread position: | 180-511 |
| Cow position: | chr5:36441285-36441610 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 200, 11 |
| Conread position: | 181-485 |
| Cow position: | chr5:6029491-6029174 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 92 |
| Conread position: | 183-403 |
| Cow position: | chr5:18324074-18324298 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 51 |
| Conread position: | 184-435 |
| Cow position: | chr5:24600850-24601098 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 148, 47 |
| Conread position: | 185-388 |
| Cow position: | chr5:3694894-3695095 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 168-301 |
| Cow position: | chr6:13374404-13374533 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 179-416 |
| Cow position: | chr6:2677945-2677714 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 210, 54 |
| Conread position: | 180-337 |
| Cow position: | chr6:48146738-48146892 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 100, 53 |
| Conread position: | 180-382 |
| Cow position: | chr6:59646254-59646058 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 180-441 |
| Cow position: | chr6:58435413-58435160 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 209, 53 |
| Conread position: | 170-417 |
| Cow position: | chr7:21405263-21405016 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 65 |
| Conread position: | 180-422 |
| Cow position: | chr7:4757830-4758068 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 152, 53 |
| Conread position: | 181-343 |
| Cow position: | chr7:25980418-25980576 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 137, 52 |
| Conread position: | 180-388 |
| Cow position: | chr8:47360297-47360092 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 69, 54 |
| Conread position: | 180-406 |
| Cow position: | chr8:48411720-48411496 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 54 |
| Conread position: | 180-408 |
| Cow position: | chr8:49796298-49796060 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 52, 121 |
| Conread position: | 171-301 |
| Cow position: | chr9:14004612-14004743 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 87, 64 |
| Conread position: | 180-398 |
| Cow position: | chr9:54348589-54348377 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 99, 10 |
| Conread position: | 180-406 |
| Cow position: | chr9:20214369-20214597 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 65, 120 |
| Conread position: | 181-403 |
| Cow position: | chr9:53143501-53143281 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 187, 110 |
| Conread position: | 182-406 |
| Cow position: | chr9:19699608-19699833 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 153, 56 |
| Conread position: | 164-406 |
| Cow position: | chrX:40771365-40771128 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 14, 68 |
| Conread position: | 167-427 |
| Cow position: | chrX:20946799-20947061 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 60, 130 |
| Conread position: | 180-286 |
| Cow position: | chrX:42045482-42045589 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 180-305 |
| Cow position: | chrX:25283539-25283663 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 180-337 |
| Cow position: | chrX:20035803-20035650 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 180-415 |
| Cow position: | chrX:36677341-36677112 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 104, 55 |
| Conread position: | 180-450 |
| Cow position: | chrX:26729034-26728770 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 204, 55 |
| Conread position: | 182-340 |
| Cow position: | chrX:37046359-37046516 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 145, 50 |
| Conread position: | 193-410 |
| Cow position: | chrX:40322822-40323031 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 195, 38 |