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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8061D03.3
        

               
Conread position:
               
1-331
               

               
Cow position:
               
chr1:1999747-1999417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 91
               

               
Conread position:
               
3-543
               

               
Cow position:
               
chr1:2000249-1999709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
284, 277
               

               
Conread position:
               
87-650
               

               
Cow position:
               
chr1:2000249-1999686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
212, 193
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr10:8996423-8996001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
145, 140
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr10:9010319-9009861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
288, 281
               

               
Conread position:
               
1-623
               

               
Cow position:
               
chr10:9010487-9009865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 114
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr10:8996759-8996045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
3-462
               

               
Cow position:
               
chr10:21939157-21938700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
410, 0
               

               
Conread position:
               
47-710
               

               
Cow position:
               
chr10:9010525-9009862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
177, 149
               

               
Conread position:
               
61-726
               

               
Cow position:
               
chr10:8996783-8996120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 76
               

               
Conread position:
               
82-614
               

               
Cow position:
               
chr10:21939316-21938798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
289, 92
               

               
Conread position:
               
105-680
               

               
Cow position:
               
chr10:21939377-21938816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
349, 157
               

               
Conread position:
               
153-447
               

               
Cow position:
               
chr10:9031317-9031612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
211-708
               

               
Cow position:
               
chr10:8996885-8996389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
330, 337
               

               
Conread position:
               
285-713
               

               
Cow position:
               
chr10:8996895-8996467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
235, 240
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr11:74554598-74554195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
118, 112
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr11:74554682-74554225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
215, 210
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr11:74555018-74554304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 112
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr11:74555102-74554388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
12-327
               

               
Cow position:
               
chr11:50368592-50368277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
13-708
               

               
Cow position:
               
chr11:74554922-74554228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 129
               

               
Conread position:
               
84-713
               

               
Cow position:
               
chr11:74555103-74554474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 56
               

               
Conread position:
               
97-411
               

               
Cow position:
               
chr11:50368591-50368277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
196, 210
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:39930734-39931181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 216
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr13:39930650-39931176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 216
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr13:22125015-22125731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 220
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr13:24162741-24163457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 220
               

               
Conread position:
               
1-735
               

               
Cow position:
               
chr13:24162657-24163391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
543, 548
               

               
Conread position:
               
1-740
               

               
Cow position:
               
chr13:22124931-22125670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
543, 548
               

               
Conread position:
               
1-742
               

               
Cow position:
               
chr13:24162825-24163566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
689, 693
               

               
Conread position:
               
1-749
               

               
Cow position:
               
chr13:22124763-22125511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-749
               

               
Cow position:
               
chr13:22124847-22125595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-749
               

               
Cow position:
               
chr13:24162489-24163237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-751
               

               
Cow position:
               
chr13:24162573-24163323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-831
               

               
Cow position:
               
chr13:22125183-22126010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
832
               

               
Alignm identity:
               
666
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
806, 743
               

               
Conread position:
               
1-984
               

               
Cow position:
               
chr13:24162909-24163878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
987
               

               
Alignm identity:
               
777
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
799, 743
               

               
Conread position:
               
19-613
               

               
Cow position:
               
chr13:39930584-39931176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 198
               

               
Conread position:
               
19-756
               

               
Cow position:
               
chr13:22124697-22125434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
522, 529
               

               
Conread position:
               
19-756
               

               
Cow position:
               
chr13:24162423-24163160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
522, 529
               

               
Conread position:
               
22-742
               

               
Cow position:
               
chr13:22125120-22125840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
668, 672
               

               
Conread position:
               
97-738
               

               
Cow position:
               
chr13:22124691-22125332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
539, 544
               

               
Conread position:
               
97-738
               

               
Cow position:
               
chr13:24162417-24163058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
539, 544
               

               
Conread position:
               
100-688
               

               
Cow position:
               
chr13:39930581-39931167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 117
               

               
Conread position:
               
180-742
               

               
Cow position:
               
chr13:39930577-39931139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 368
               

               
Conread position:
               
181-742
               

               
Cow position:
               
chr13:22124691-22125252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
484, 491
               

               
Conread position:
               
181-742
               

               
Cow position:
               
chr13:24162417-24162978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
484, 491
               

               
Conread position:
               
208-570
               

               
Cow position:
               
chr13:56292157-56291793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
98, 106
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr14:25860449-25860765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
137, 144
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr14:447930-448247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr14:3156155-3156485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
215, 229
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr14:25836892-25837226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 65
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr14:25877500-25877844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
137, 144
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr14:680900-681275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
49, 61
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr14:3127681-3127264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
117, 111
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr14:433983-434401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 206
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:3155414-3155837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
48, 59
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr14:25836724-25837182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr14:25877332-25877790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
132, 141
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr14:3127765-3127304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 281
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr14:3100832-3100340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
224, 229
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr14:3080169-3079667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 141
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr14:3100998-3100471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
262, 116
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr14:3127849-3127320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 201
               

               
Conread position:
               
1-580
               

               
Cow position:
               
chr14:433815-434394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 229
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr14:3061232-3060647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 109
               

               
Conread position:
               
1-623
               

               
Cow position:
               
chr14:3061568-3060946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-623
               

               
Cow position:
               
chr14:25877164-25877786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
284, 276
               

               
Conread position:
               
1-624
               

               
Cow position:
               
chr14:447594-448216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
564, 552
               

               
Conread position:
               
1-624
               

               
Cow position:
               
chr14:25895455-25896078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr14:25859525-25860161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr14:25876576-25877212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 141
               

               
Conread position:
               
1-657
               

               
Cow position:
               
chr14:3061316-3060659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 277
               

               
Conread position:
               
1-686
               

               
Cow position:
               
chr14:25859861-25860546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
130, 157
               

               
Conread position:
               
1-686
               

               
Cow position:
               
chr14:25876912-25877597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
133, 157
               

               
Conread position:
               
1-688
               

               
Cow position:
               
chr14:3101247-3100565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr14:25876828-25877536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
221, 229
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr14:25836388-25837097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
274, 268
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr14:25860029-25860738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 138
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr14:25894951-25895660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
1-713
               

               
Cow position:
               
chr14:3080925-3080213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 46
               

               
Conread position:
               
1-714
               

               
Cow position:
               
chr14:3080421-3079708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 229
               

               
Conread position:
               
1-714
               

               
Cow position:
               
chr14:25836052-25836765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
543, 547
               

               
Conread position:
               
1-714
               

               
Cow position:
               
chr14:25895119-25895832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
641, 649
               

               
Conread position:
               
1-714
               

               
Cow position:
               
chr14:25895203-25895916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
453, 445
               

               
Conread position:
               
1-723
               

               
Cow position:
               
chr14:25895707-25896427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
130, 145
               

               
Conread position:
               
1-725
               

               
Cow position:
               
chr14:25876744-25877468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 304
               

               
Conread position:
               
1-725
               

               
Cow position:
               
chr14:25895035-25895759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
493, 469
               

               
Conread position:
               
1-726
               

               
Cow position:
               
chr14:3080757-3080034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 279
               

               
Conread position:
               
1-728
               

               
Cow position:
               
chr14:25876492-25877220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
1-735
               

               
Cow position:
               
chr14:3080589-3079855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 262
               

               
Conread position:
               
1-741
               

               
Cow position:
               
chr14:3080673-3079932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 132
               

               
Conread position:
               
1-741
               

               
Cow position:
               
chr14:25895371-25896111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 145
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr14:3128101-3127359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 201
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr14:447848-448247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 139
               

               
Conread position:
               
3-457
               

               
Cow position:
               
chr14:680818-681272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-530
               

               
Cow position:
               
chr14:680734-681261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
3-711
               

               
Cow position:
               
chr14:3061650-3060942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
3-715
               

               
Cow position:
               
chr14:680398-681110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 27
               

               
Conread position:
               
3-735
               

               
Cow position:
               
chr14:3061734-3061002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 227
               

               
Conread position:
               
3-741
               

               
Cow position:
               
chr14:3061398-3060659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
3-743
               

               
Cow position:
               
chr14:680482-681222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 275
               

               
Conread position:
               
3-743
               

               
Cow position:
               
chr14:3080503-3079763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 205
               

               
Conread position:
               
4-743
               

               
Cow position:
               
chr14:3128014-3127275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
540, 531
               

               
Conread position:
               
5-722
               

               
Cow position:
               
chr14:3101327-3100615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
7-628
               

               
Cow position:
               
chr14:680654-681275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
8-680
               

               
Cow position:
               
chr14:25876331-25877003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
69, 86
               

               
Conread position:
               
13-456
               

               
Cow position:
               
chr14:3156083-3156528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 31
               

               
Conread position:
               
17-459
               

               
Cow position:
               
chr14:25860297-25860739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
32, 40
               

               
Conread position:
               
17-623
               

               
Cow position:
               
chr14:25836572-25837178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
205, 213
               

               
Conread position:
               
17-715
               

               
Cow position:
               
chr14:25835984-25836682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
32, 57
               

               
Conread position:
               
19-579
               

               
Cow position:
               
chr14:3155921-3156481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
19-623
               

               
Cow position:
               
chr14:25859291-25859895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
114, 129
               

               
Conread position:
               
19-710
               

               
Cow position:
               
chr14:25836154-25836845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
19-735
               

               
Cow position:
               
chr14:3080823-3080107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 345
               

               
Conread position:
               
19-743
               

               
Cow position:
               
chr14:680246-680970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 343
               

               
Conread position:
               
21-636
               

               
Cow position:
               
chr14:3080319-3079702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 295
               

               
Conread position:
               
22-708
               

               
Cow position:
               
chr14:3128164-3127479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
643, 650
               

               
Conread position:
               
33-714
               

               
Cow position:
               
chr14:3061452-3060771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 197
               

               
Conread position:
               
41-456
               

               
Cow position:
               
chr14:3100876-3100461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
106, 102
               

               
Conread position:
               
52-383
               

               
Cow position:
               
chr14:663431-663100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
81, 85
               

               
Conread position:
               
52-675
               

               
Cow position:
               
chr14:433782-434405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
52-751
               

               
Cow position:
               
chr14:680363-681062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 228
               

               
Conread position:
               
55-735
               

               
Cow position:
               
chr14:447564-448244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 223
               

               
Conread position:
               
60-641
               

               
Cow position:
               
chr14:25859836-25860417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
162, 170
               

               
Conread position:
               
61-709
               

               
Cow position:
               
chr14:25876300-25876948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
61-730
               

               
Cow position:
               
chr14:3101438-3100775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 74
               

               
Conread position:
               
73-707
               

               
Cow position:
               
chr14:25859261-25859895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
226, 221
               

               
Conread position:
               
81-707
               

               
Cow position:
               
chr14:3061740-3061114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 233
               

               
Conread position:
               
81-743
               

               
Cow position:
               
chr14:680224-680886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 200
               

               
Conread position:
               
82-508
               

               
Cow position:
               
chr14:3155411-3155837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
64, 59
               

               
Conread position:
               
82-710
               

               
Cow position:
               
chr14:25836553-25837181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
225, 232
               

               
Conread position:
               
82-714
               

               
Cow position:
               
chr14:25894948-25895580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
85-743
               

               
Cow position:
               
chr14:3081010-3080351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
97-743
               

               
Cow position:
               
chr14:3128173-3127527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 169
               

               
Conread position:
               
144-457
               

               
Cow position:
               
chr14:663423-663110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 86
               

               
Conread position:
               
145-743
               

               
Cow position:
               
chr14:447570-448168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 217
               

               
Conread position:
               
156-741
               

               
Cow position:
               
chr14:433801-434387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 125
               

               
Conread position:
               
157-708
               

               
Cow position:
               
chr14:25859261-25859812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 69
               

               
Conread position:
               
159-714
               

               
Cow position:
               
chr14:25894941-25895496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
222, 227
               

               
Conread position:
               
163-735
               

               
Cow position:
               
chr14:3061742-3061170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 67
               

               
Conread position:
               
171-743
               

               
Cow position:
               
chr14:447512-448084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 124
               

               
Conread position:
               
225-743
               

               
Cow position:
               
chr14:680200-680718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
309-735
               

               
Cow position:
               
chr14:680200-680626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
331-744
               

               
Cow position:
               
chr14:3061742-3061329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
123, 115
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr15:19139067-19138654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 85
               

               
Conread position:
               
1-490
               

               
Cow position:
               
chr15:19139151-19138662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
201, 195
               

               
Conread position:
               
35-581
               

               
Cow position:
               
chr15:19139203-19138655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 247
               

               
Conread position:
               
61-742
               

               
Cow position:
               
chr15:19139343-19138662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 135
               

               
Conread position:
               
1-698
               

               
Cow position:
               
chr16:14627496-14626799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
82-462
               

               
Cow position:
               
chr16:14627163-14626783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
177, 183
               

               
Conread position:
               
82-751
               

               
Cow position:
               
chr16:14627751-14627082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 59
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr17:22551839-22551509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr17:22452208-22451748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
132, 145
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr17:44467865-44468373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
61, 39
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr17:44467781-44468294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
1-592
               

               
Cow position:
               
chr17:41440782-41440191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
1-636
               

               
Cow position:
               
chr17:22589929-22589294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
1-662
               

               
Cow position:
               
chr17:22552175-22551514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
540, 547
               

               
Conread position:
               
1-708
               

               
Cow position:
               
chr17:22552931-22552225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 54
               

               
Conread position:
               
1-711
               

               
Cow position:
               
chr17:44467445-44468155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
1-713
               

               
Cow position:
               
chr17:41441034-41440322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
1-713
               

               
Cow position:
               
chr17:41441118-41440406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr17:22552511-22551797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr17:22552763-22552047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
1-725
               

               
Cow position:
               
chr17:22552343-22551619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 29
               

               
Conread position:
               
1-726
               

               
Cow position:
               
chr17:22553099-22552374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
1-728
               

               
Cow position:
               
chr17:22590097-22589369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
499, 476
               

               
Conread position:
               
1-741
               

               
Cow position:
               
chr17:41440950-41440209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
1-742
               

               
Cow position:
               
chr17:22552427-22551686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
546, 529
               

               
Conread position:
               
3-383
               

               
Cow position:
               
chr17:22452122-22451742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
130, 134
               

               
Conread position:
               
3-595
               

               
Cow position:
               
chr17:44467699-44468291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
4-711
               

               
Cow position:
               
chr17:44467364-44468071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
7-560
               

               
Cow position:
               
chr17:22452286-22451733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
199, 192
               

               
Conread position:
               
13-662
               

               
Cow position:
               
chr17:22589833-22589184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 99
               

               
Conread position:
               
19-742
               

               
Cow position:
               
chr17:22552829-22552106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
523, 516
               

               
Conread position:
               
61-415
               

               
Cow position:
               
chr17:22551863-22551509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
61-430
               

               
Cow position:
               
chr17:44468009-44468378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
132, 139
               

               
Conread position:
               
61-708
               

               
Cow position:
               
chr17:22552955-22552309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 429
               

               
Conread position:
               
81-531
               

               
Cow position:
               
chr17:22499394-22498944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
386, 379
               

               
Conread position:
               
81-720
               

               
Cow position:
               
chr17:22553103-22552464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 96
               

               
Conread position:
               
82-688
               

               
Cow position:
               
chr17:22552514-22551908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 200
               

               
Conread position:
               
82-716
               

               
Cow position:
               
chr17:44467610-44468244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
214, 208
               

               
Conread position:
               
83-721
               

               
Cow position:
               
chr17:22452377-22451740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
50, 5
               

               
Conread position:
               
85-715
               

               
Cow position:
               
chr17:41441118-41440488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 52
               

               
Conread position:
               
157-738
               

               
Cow position:
               
chr17:22590109-22589528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
385, 375
               

               
Conread position:
               
163-682
               

               
Cow position:
               
chr17:22553105-22552586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 39
               

               
Conread position:
               
169-742
               

               
Cow position:
               
chr17:41441118-41440545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
118, 111
               

               
Conread position:
               
210-725
               

               
Cow position:
               
chr17:22553142-22552627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
129, 140
               

               
Conread position:
               
211-725
               

               
Cow position:
               
chr17:22590223-22589709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 44
               

               
Conread position:
               
217-727
               

               
Cow position:
               
chr17:22452412-22451902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
160, 149
               

               
Conread position:
               
228-707
               

               
Cow position:
               
chr17:22499331-22498852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
109, 121
               

               
Conread position:
               
262-744
               

               
Cow position:
               
chr17:22590256-22589774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
85, 77
               

               
Conread position:
               
293-727
               

               
Cow position:
               
chr17:22553143-22552709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
130, 135
               

               
Conread position:
               
312-734
               

               
Cow position:
               
chr17:22499331-22498909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
269, 276
               

               
Conread position:
               
377-742
               

               
Cow position:
               
chr17:22553143-22552778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
130, 141
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr18:1418344-1418601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr18:49022988-49023305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr18:50282016-50282346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
116, 121
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr18:50246503-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
262, 254
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr18:42792566-42792904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
323, 0
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr18:56267454-56267113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr18:56329173-56328821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 229
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr18:56391257-56390856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
224, 229
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr18:49032452-49032049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
144, 140
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr18:50083876-50084281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
336, 348
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr18:56329257-56328841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 111
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr18:49022820-49023242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
103, 107
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr18:42724330-42723907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:42675231-42674785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr18:42837678-42837225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
225, 229
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr18:49022736-49023190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
145, 131
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr18:55066936-55066480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
45, 78
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr18:56247555-56247107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr18:52447870-52448331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
145, 140
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr18:52012017-52011554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr18:50281848-50282322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
281, 291
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr18:43168050-43168525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr18:50058861-50058388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
118, 111
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr18:53610209-53609730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
298, 293
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:55497532-55497029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:40075197-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 75
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:42827410-42827921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
286, 280
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:51400622-51401139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
285, 276
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:51400538-51401067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
118, 111
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:56391509-56390980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 140
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr18:50271635-50272164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:1418008-1418558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 114
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:42724498-42723947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
138, 145
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr18:40306763-40307314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
118, 112
               

               
Conread position:
               
1-568
               

               
Cow position:
               
chr18:50295362-50295928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
129, 137
               

               
Conread position:
               
1-579
               

               
Cow position:
               
chr18:55497616-55497038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
221, 216
               

               
Conread position:
               
1-623
               

               
Cow position:
               
chr18:33064260-33063638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
1-625
               

               
Cow position:
               
chr18:33093100-33092476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
259, 263
               

               
Conread position:
               
1-636
               

               
Cow position:
               
chr18:50848845-50849480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
224, 229
               

               
Conread position:
               
1-641
               

               
Cow position:
               
chr18:51789383-51788743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
312, 306
               

               
Conread position:
               
1-642
               

               
Cow position:
               
chr18:53560184-53560821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
526, 521
               

               
Conread position:
               
1-651
               

               
Cow position:
               
chr18:50246167-50246817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
1-662
               

               
Cow position:
               
chr18:56329509-56328848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-668
               

               
Cow position:
               
chr18:56316307-56316976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 364
               

               
Conread position:
               
1-670
               

               
Cow position:
               
chr18:41198085-41198755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
336, 349
               

               
Conread position:
               
1-674
               

               
Cow position:
               
chr18:50031060-50030389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
118, 114
               

               
Conread position:
               
1-680
               

               
Cow position:
               
chr18:50059113-50058436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
137, 132
               

               
Conread position:
               
1-682
               

               
Cow position:
               
chr18:14454014-14453330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
1-686
               

               
Cow position:
               
chr18:50848677-50849362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
132, 144
               

               
Conread position:
               
1-686
               

               
Cow position:
               
chr18:53610461-53609776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
634, 615
               

               
Conread position:
               
1-688
               

               
Cow position:
               
chr18:50246083-50246770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 348
               

               
Conread position:
               
1-698
               

               
Cow position:
               
chr18:49032788-49032091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 29
               

               
Conread position:
               
1-707
               

               
Cow position:
               
chr18:33064512-33063806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
1-707
               

               
Cow position:
               
chr18:43093664-43092958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
1-707
               

               
Cow position:
               
chr18:55523398-55524104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
145, 141
               

               
Conread position:
               
1-708
               

               
Cow position:
               
chr18:33064848-33064142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
225, 207
               

               
Conread position:
               
1-708
               

               
Cow position:
               
chr18:42675315-42674609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
120, 111
               

               
Conread position:
               
1-708
               

               
Cow position:
               
chr18:50083540-50084246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
1-713
               

               
Cow position:
               
chr18:40306595-40307307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
120, 114
               

               
Conread position:
               
1-713
               

               
Cow position:
               
chr18:52447030-52447742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr18:41197749-41198463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
542, 547
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr18:49033124-49032410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 229
               

               
Conread position:
               
1-716
               

               
Cow position:
               
chr18:49033292-49032577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr18:42792146-42792862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
551, 567
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr18:50083372-50084088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 31
               

               
Conread position:
               
1-720
               

               
Cow position:
               
chr18:42694042-42693323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
663, 671
               

               
Conread position:
               
1-723
               

               
Cow position:
               
chr18:42791138-42791860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
220, 216
               

               
Conread position:
               
1-725
               

               
Cow position:
               
chr18:44398265-44397541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
1-725
               

               
Cow position:
               
chr18:56316223-56316947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
1-726
               

               
Cow position:
               
chr18:42791978-42792703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
1-726
               

               
Cow position:
               
chr18:50059449-50058724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 265
               

               
Conread position:
               
1-726
               

               
Cow position:
               
chr18:56128463-56129187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
1-727
               

               
Cow position:
               
chr18:42791054-42791780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
1-727
               

               
Cow position:
               
chr18:49032872-49032146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 115
               

               
Conread position:
               
1-727
               

               
Cow position:
               
chr18:50059533-50058807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 114
               

               
Conread position:
               
1-733
               

               
Cow position:
               
chr18:53635702-53634971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
1-734
               

               
Cow position:
               
chr18:56128295-56129028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
671, 663
               

               
Conread position:
               
1-735
               

               
Cow position:
               
chr18:43167714-43168448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
454, 448
               

               
Conread position:
               
1-735
               

               
Cow position:
               
chr18:53635870-53635136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
671, 663
               

               
Conread position:
               
1-735
               

               
Cow position:
               
chr18:53636038-53635304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-735
               

               
Cow position:
               
chr18:56128127-56128861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
1-736
               

               
Cow position:
               
chr18:56330013-56329280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 279
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr18:52012353-52011622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 229
               

               
Conread position:
               
1-742
               

               
Cow position:
               
chr18:42693706-42692965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
536, 477
               

               
Conread position:
               
1-742
               

               
Cow position:
               
chr18:42693874-42693134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-742
               

               
Cow position:
               
chr18:56330181-56329440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
453, 445
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:40306343-40307085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
118, 109
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:41197581-41198323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
120, 114
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:43093580-43092838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
313, 308
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:49032956-49032214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:49033208-49032466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 281
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:53635954-53635212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:56316139-56316881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:56329677-56328935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 112
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:56329845-56329103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 229
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:56329929-56329187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 135
               

               
Conread position:
               
1-751
               

               
Cow position:
               
chr18:56329761-56329011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr18:56494272-56494541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr18:53526036-53526455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
3-456
               

               
Cow position:
               
chr18:56391339-56390886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
3-539
               

               
Cow position:
               
chr18:56391423-56390887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
143, 138
               

               
Conread position:
               
3-687
               

               
Cow position:
               
chr18:53586655-53585971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 110
               

               
Conread position:
               
3-717
               

               
Cow position:
               
chr18:53559934-53560648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 214
               

               
Conread position:
               
3-726
               

               
Cow position:
               
chr18:53586739-53586018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 196
               

               
Conread position:
               
3-743
               

               
Cow position:
               
chr18:42693788-42693049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 134
               

               
Conread position:
               
3-743
               

               
Cow position:
               
chr18:56128213-56128953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
4-342
               

               
Cow position:
               
chr18:1418263-1418601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-440
               

               
Cow position:
               
chr18:51839216-51838780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 38
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr18:53525953-53526432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
129, 109
               

               
Conread position:
               
4-643
               

               
Cow position:
               
chr18:41948919-41948282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
4-656
               

               
Cow position:
               
chr18:51400457-51401109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
114, 108
               

               
Conread position:
               
4-689
               

               
Cow position:
               
chr18:55523569-55524254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
4-715
               

               
Cow position:
               
chr18:56391590-56390879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 226
               

               
Conread position:
               
5-716
               

               
Cow position:
               
chr18:50099321-50100032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 42
               

               
Conread position:
               
6-624
               

               
Cow position:
               
chr18:50848514-50849131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 259
               

               
Conread position:
               
6-679
               

               
Cow position:
               
chr18:55497695-55497020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
6-698
               

               
Cow position:
               
chr18:50059612-50058920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
449, 439
               

               
Conread position:
               
7-706
               

               
Cow position:
               
chr18:53586903-53586204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 33
               

               
Conread position:
               
7-743
               

               
Cow position:
               
chr18:50083462-50084198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 69
               

               
Conread position:
               
12-327
               

               
Cow position:
               
chr18:56391969-56391654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
12-737
               

               
Cow position:
               
chr18:56493774-56494502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 221
               

               
Conread position:
               
13-411
               

               
Cow position:
               
chr18:43168146-43168544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
13-415
               

               
Cow position:
               
chr18:50281944-50282346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
183, 196
               

               
Conread position:
               
13-458
               

               
Cow position:
               
chr18:33064080-33063635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
217, 195
               

               
Conread position:
               
13-527
               

               
Cow position:
               
chr18:42693442-42692928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 213
               

               
Conread position:
               
13-605
               

               
Cow position:
               
chr18:55523746-55524338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
115, 102
               

               
Conread position:
               
13-636
               

               
Cow position:
               
chr18:51812530-51811907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
13-642
               

               
Cow position:
               
chr18:50281692-50282321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 128
               

               
Conread position:
               
13-663
               

               
Cow position:
               
chr18:42792242-42792892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
70, 63
               

               
Conread position:
               
13-666
               

               
Cow position:
               
chr18:40306691-40307346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
13-686
               

               
Cow position:
               
chr18:55523662-55524335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
208, 188
               

               
Conread position:
               
13-688
               

               
Cow position:
               
chr18:56128055-56128730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
13-688
               

               
Cow position:
               
chr18:56128391-56129066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
459, 447
               

               
Conread position:
               
13-708
               

               
Cow position:
               
chr18:42791318-42792012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
70, 63
               

               
Conread position:
               
13-708
               

               
Cow position:
               
chr18:44398421-44397727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
106, 102
               

               
Conread position:
               
13-710
               

               
Cow position:
               
chr18:53525710-53526407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
250, 242
               

               
Conread position:
               
13-713
               

               
Cow position:
               
chr18:53636110-53635410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
13-717
               

               
Cow position:
               
chr18:50098993-50099697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 63
               

               
Conread position:
               
13-725
               

               
Cow position:
               
chr18:42693946-42693234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
652, 661
               

               
Conread position:
               
13-727
               

               
Cow position:
               
chr18:41197509-41198223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 102
               

               
Conread position:
               
13-727
               

               
Cow position:
               
chr18:41197677-41198391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
651, 661
               

               
Conread position:
               
13-727
               

               
Cow position:
               
chr18:53509256-53509970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
250, 242
               

               
Conread position:
               
13-727
               

               
Cow position:
               
chr18:53560112-53560822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
13-727
               

               
Cow position:
               
chr18:55067092-55066378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 102
               

               
Conread position:
               
13-728
               

               
Cow position:
               
chr18:50848353-50849068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 156
               

               
Conread position:
               
13-730
               

               
Cow position:
               
chr18:40074957-40075674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
13-740
               

               
Cow position:
               
chr18:53586981-53586254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 112
               

               
Conread position:
               
13-741
               

               
Cow position:
               
chr18:53635774-53635046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-743
               

               
Cow position:
               
chr18:40306187-40306917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
110, 102
               

               
Conread position:
               
13-743
               

               
Cow position:
               
chr18:52447546-52448276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
106, 99
               

               
Conread position:
               
16-543
               

               
Cow position:
               
chr18:49022667-49023194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
17-446
               

               
Cow position:
               
chr18:49021673-49022103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
17-657
               

               
Cow position:
               
chr18:42724566-42723925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 309
               

               
Conread position:
               
18-716
               

               
Cow position:
               
chr18:49022419-49023115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
117, 109
               

               
Conread position:
               
19-545
               

               
Cow position:
               
chr18:50246353-50246876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
106, 115
               

               
Conread position:
               
19-708
               

               
Cow position:
               
chr18:44398331-44397643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
114, 126
               

               
Conread position:
               
19-726
               

               
Cow position:
               
chr18:43093727-43093025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
19-727
               

               
Cow position:
               
chr18:56330079-56329371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 345
               

               
Conread position:
               
19-735
               

               
Cow position:
               
chr18:50848191-50848907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
106, 113
               

               
Conread position:
               
19-740
               

               
Cow position:
               
chr18:53559866-53560587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
49, 69
               

               
Conread position:
               
19-742
               

               
Cow position:
               
chr18:42694108-42693385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
19-742
               

               
Cow position:
               
chr18:56316073-56316796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 210
               

               
Conread position:
               
20-714
               

               
Cow position:
               
chr18:52447385-52448079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 43
               

               
Conread position:
               
20-741
               

               
Cow position:
               
chr18:42694191-42693470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 105
               

               
Conread position:
               
21-688
               

               
Cow position:
               
chr18:50049113-50048446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
98, 92
               

               
Conread position:
               
22-717
               

               
Cow position:
               
chr18:50848782-50849477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
111, 115
               

               
Conread position:
               
33-717
               

               
Cow position:
               
chr18:50022452-50021762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
34-740
               

               
Cow position:
               
chr18:50059668-50058962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
34-743
               

               
Cow position:
               
chr18:43175317-43174608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
261, 276
               

               
Conread position:
               
42-644
               

               
Cow position:
               
chr18:50083665-50084267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 70
               

               
Conread position:
               
49-748
               

               
Cow position:
               
chr18:42790936-42791634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
160, 7
               

               
Conread position:
               
51-673
               

               
Cow position:
               
chr18:1417974-1418598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 229
               

               
Conread position:
               
52-723
               

               
Cow position:
               
chr18:40324575-40323904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
95, 90
               

               
Conread position:
               
55-710
               

               
Cow position:
               
chr18:42675344-42674690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
148, 10
               

               
Conread position:
               
56-710
               

               
Cow position:
               
chr18:33064289-33063635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
170, 174
               

               
Conread position:
               
56-726
               

               
Cow position:
               
chr18:52447338-52448005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
63, 6
               

               
Conread position:
               
56-743
               

               
Cow position:
               
chr18:49033405-49032718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 89
               

               
Conread position:
               
61-424
               

               
Cow position:
               
chr18:56267478-56267113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
146, 166
               

               
Conread position:
               
61-567
               

               
Cow position:
               
chr18:50281824-50282330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 313
               

               
Conread position:
               
61-642
               

               
Cow position:
               
chr18:50295254-50295835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
61-678
               

               
Cow position:
               
chr18:50271527-50272144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 49
               

               
Conread position:
               
61-708
               

               
Cow position:
               
chr18:49033316-49032670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
394, 388
               

               
Conread position:
               
61-708
               

               
Cow position:
               
chr18:52012377-52011731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
158, 149
               

               
Conread position:
               
61-727
               

               
Cow position:
               
chr18:50059305-50058639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
276, 289
               

               
Conread position:
               
61-743
               

               
Cow position:
               
chr18:49022294-49022974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
75, 66
               

               
Conread position:
               
73-680
               

               
Cow position:
               
chr18:53610473-53609866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
75-735
               

               
Cow position:
               
chr18:42724845-42724184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
8, 166
               

               
Conread position:
               
78-741
               

               
Cow position:
               
chr18:40306167-40306831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
79-743
               

               
Cow position:
               
chr18:56330187-56329523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
394, 384
               

               
Conread position:
               
80-727
               

               
Cow position:
               
chr18:43167709-43168356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
95, 115
               

               
Conread position:
               
81-641
               

               
Cow position:
               
chr18:43022565-43022005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
81-711
               

               
Cow position:
               
chr18:33064936-33064306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
38, 31
               

               
Conread position:
               
81-715
               

               
Cow position:
               
chr18:51400282-51400916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 31
               

               
Conread position:
               
82-566
               

               
Cow position:
               
chr18:42827407-42827891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
289, 283
               

               
Conread position:
               
82-710
               

               
Cow position:
               
chr18:44184631-44184003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 59
               

               
Conread position:
               
82-713
               

               
Cow position:
               
chr18:53498314-53498943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
265, 156
               

               
Conread position:
               
82-743
               

               
Cow position:
               
chr18:42791975-42792636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
82-743
               

               
Cow position:
               
chr18:56316052-56316713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 367
               

               
Conread position:
               
83-727
               

               
Cow position:
               
chr18:50281678-50282322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 32
               

               
Conread position:
               
85-569
               

               
Cow position:
               
chr18:50295362-50295846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
175, 181
               

               
Conread position:
               
85-716
               

               
Cow position:
               
chr18:50083288-50083919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
472, 468
               

               
Conread position:
               
88-703
               

               
Cow position:
               
chr18:41197500-41198115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
88-729
               

               
Cow position:
               
chr18:50848344-50848985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
426, 450
               

               
Conread position:
               
92-712
               

               
Cow position:
               
chr18:53587070-53586450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
41, 45
               

               
Conread position:
               
96-727
               

               
Cow position:
               
chr18:56391582-56390951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
105-742
               

               
Cow position:
               
chr18:42694190-42693553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 186
               

               
Conread position:
               
107-740
               

               
Cow position:
               
chr18:50295216-50295849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
118-740
               

               
Cow position:
               
chr18:50059668-50059046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
505, 498
               

               
Conread position:
               
119-707
               

               
Cow position:
               
chr18:50098931-50099519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
111, 106
               

               
Conread position:
               
120-708
               

               
Cow position:
               
chr18:53587126-53586539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
136-466
               

               
Cow position:
               
chr18:55442323-55442653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
146, 151
               

               
Conread position:
               
144-717
               

               
Cow position:
               
chr18:42791701-42792274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
86, 81
               

               
Conread position:
               
157-708
               

               
Cow position:
               
chr18:52012448-52011899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
157-725
               

               
Cow position:
               
chr18:53509232-53509800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
157-725
               

               
Cow position:
               
chr18:53525686-53526254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 73
               

               
Conread position:
               
157-727
               

               
Cow position:
               
chr18:50049145-50048575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
180, 191
               

               
Conread position:
               
157-728
               

               
Cow position:
               
chr18:1417996-1418567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
214, 205
               

               
Conread position:
               
158-727
               

               
Cow position:
               
chr18:33064943-33064374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
142, 137
               

               
Conread position:
               
162-686
               

               
Cow position:
               
chr18:55523308-55523831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
163-566
               

               
Cow position:
               
chr18:14453288-14452885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
163-708
               

               
Cow position:
               
chr18:51400280-51400825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
137, 132
               

               
Conread position:
               
166-681
               

               
Cow position:
               
chr18:42827407-42827922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
289, 283
               

               
Conread position:
               
166-707
               

               
Cow position:
               
chr18:50271464-50272005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
167-743
               

               
Cow position:
               
chr18:50281678-50282254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
168-707
               

               
Cow position:
               
chr18:33093101-33092562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
299, 291
               

               
Conread position:
               
180-743
               

               
Cow position:
               
chr18:40306186-40306749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
461, 457
               

               
Conread position:
               
190-725
               

               
Cow position:
               
chr18:44398412-44397877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
70, 82
               

               
Conread position:
               
201-688
               

               
Cow position:
               
chr18:56247775-56247296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 8
               

               
Conread position:
               
201-742
               

               
Cow position:
               
chr18:43167662-43168203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 39
               

               
Conread position:
               
211-686
               

               
Cow position:
               
chr18:50281638-50282113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
211-719
               

               
Cow position:
               
chr18:50098939-50099446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
211-726
               

               
Cow position:
               
chr18:1417966-1418479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
244, 234
               

               
Conread position:
               
220-725
               

               
Cow position:
               
chr18:41949375-41948870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
324, 329
               

               
Conread position:
               
227-727
               

               
Cow position:
               
chr18:53636064-53635564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
144, 137
               

               
Conread position:
               
227-727
               

               
Cow position:
               
chr18:56128101-56128601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
83, 87
               

               
Conread position:
               
227-735
               

               
Cow position:
               
chr18:53610487-53609979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
414, 389
               

               
Conread position:
               
229-727
               

               
Cow position:
               
chr18:50245978-50246473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
249, 6
               

               
Conread position:
               
229-743
               

               
Cow position:
               
chr18:49022712-49023226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
216, 208
               

               
Conread position:
               
246-727
               

               
Cow position:
               
chr18:56128036-56128517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
208, 200
               

               
Conread position:
               
247-740
               

               
Cow position:
               
chr18:53587083-53586590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
250-734
               

               
Cow position:
               
chr18:42827407-42827891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
94, 100
               

               
Conread position:
               
253-728
               

               
Cow position:
               
chr18:33093100-33092625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
264-708
               

               
Cow position:
               
chr18:55497689-55497246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
264-743
               

               
Cow position:
               
chr18:55067093-55066614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
46, 50
               

               
Conread position:
               
265-712
               

               
Cow position:
               
chr18:44398421-44397974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
279, 287
               

               
Conread position:
               
287-743
               

               
Cow position:
               
chr18:50281630-50282086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 61
               

               
Conread position:
               
304-740
               

               
Cow position:
               
chr18:1417975-1418411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
199, 174
               

               
Conread position:
               
330-707
               

               
Cow position:
               
chr18:53636129-53635752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
236, 232
               

               
Conread position:
               
331-743
               

               
Cow position:
               
chr18:53587083-53586671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
356-751
               

               
Cow position:
               
chr18:42694191-42693796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 104
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr19:23597287-23597697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr19:23650064-23650479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr19:23597203-23597684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
349, 327
               

               
Conread position:
               
1-666
               

               
Cow position:
               
chr19:23614446-23615111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
136, 114
               

               
Conread position:
               
1-707
               

               
Cow position:
               
chr19:20677705-20678411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr19:23596954-23597659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
215, 78
               

               
Conread position:
               
1-713
               

               
Cow position:
               
chr19:20677789-20678501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
211, 206
               

               
Conread position:
               
1-723
               

               
Cow position:
               
chr19:23614026-23614748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
1-725
               

               
Cow position:
               
chr19:14940078-14940802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 313
               

               
Conread position:
               
1-725
               

               
Cow position:
               
chr19:14940162-14940886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 229
               

               
Conread position:
               
1-730
               

               
Cow position:
               
chr19:14960135-14959422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
550, 329
               

               
Conread position:
               
1-730
               

               
Cow position:
               
chr19:23649308-23650037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
1-734
               

               
Cow position:
               
chr19:14940330-14941063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr19:23649392-23650134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 294
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr19:23649644-23650386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
13-530
               

               
Cow position:
               
chr19:23649908-23650425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
212, 217
               

               
Conread position:
               
13-707
               

               
Cow position:
               
chr19:20677633-20678327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
13-708
               

               
Cow position:
               
chr19:23613870-23614564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
105, 97
               

               
Conread position:
               
13-743
               

               
Cow position:
               
chr19:23613618-23614348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
19-596
               

               
Cow position:
               
chr19:23597137-23597714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-743
               

               
Cow position:
               
chr19:14940264-14940988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
127, 123
               

               
Conread position:
               
22-482
               

               
Cow position:
               
chr19:23650001-23650461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
97, 91
               

               
Conread position:
               
54-707
               

               
Cow position:
               
chr19:23649277-23649930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
512, 500
               

               
Conread position:
               
61-709
               

               
Cow position:
               
chr19:23614254-23614902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
84, 72
               

               
Conread position:
               
61-740
               

               
Cow position:
               
chr19:23596930-23597606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
115, 103
               

               
Conread position:
               
65-544
               

               
Cow position:
               
chr19:20635561-20635084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
106-743
               

               
Cow position:
               
chr19:14940015-14940652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
40, 36
               

               
Conread position:
               
124-715
               

               
Cow position:
               
chr19:23596825-23597413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
541, 210
               

               
Conread position:
               
157-743
               

               
Cow position:
               
chr19:20635639-20635053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 78
               

               
Conread position:
               
158-751
               

               
Cow position:
               
chr19:23649297-23649890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 45
               

               
Conread position:
               
162-734
               

               
Cow position:
               
chr19:14939987-14940559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 68
               

               
Conread position:
               
201-461
               

               
Cow position:
               
chr19:14948428-14948169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
228-740
               

               
Cow position:
               
chr19:23649283-23649796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
54, 59
               

               
Conread position:
               
1-584
               

               
Cow position:
               
chr2:82799866-82800449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 229
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr2:86465186-86465787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
1-726
               

               
Cow position:
               
chr2:82799698-82800421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 138
               

               
Conread position:
               
1-742
               

               
Cow position:
               
chr2:5875010-5874269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 228
               

               
Conread position:
               
1-759
               

               
Cow position:
               
chr2:5874842-5874084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
762
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 219
               

               
Conread position:
               
3-642
               

               
Cow position:
               
chr2:5874756-5874117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 217
               

               
Conread position:
               
3-734
               

               
Cow position:
               
chr2:82799616-82800347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
4-725
               

               
Cow position:
               
chr2:82799533-82800254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
4-742
               

               
Cow position:
               
chr2:5874923-5874185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 301
               

               
Conread position:
               
5-512
               

               
Cow position:
               
chr2:86465610-86466117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
224, 218
               

               
Conread position:
               
6-340
               

               
Cow position:
               
chr2:48689365-48689031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
127, 132
               

               
Conread position:
               
13-742
               

               
Cow position:
               
chr2:78754932-78755659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
247, 253
               

               
Conread position:
               
13-743
               

               
Cow position:
               
chr2:5875082-5874352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 105
               

               
Conread position:
               
19-742
               

               
Cow position:
               
chr2:5875160-5874437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 198
               

               
Conread position:
               
61-735
               

               
Cow position:
               
chr2:82799506-82800180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 149
               

               
Conread position:
               
61-743
               

               
Cow position:
               
chr2:86465162-86465844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
238, 220
               

               
Conread position:
               
69-530
               

               
Cow position:
               
chr2:48689553-48689093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
83-742
               

               
Cow position:
               
chr2:5875180-5874521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 99
               

               
Conread position:
               
106-680
               

               
Cow position:
               
chr2:82799467-82800041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
117-614
               

               
Cow position:
               
chr2:86465134-86465631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 6
               

               
Conread position:
               
190-726
               

               
Cow position:
               
chr2:82799467-82800003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
110, 104
               

               
Conread position:
               
270-708
               

               
Cow position:
               
chr2:86465035-86465472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr21:12659508-12660020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 277
               

               
Conread position:
               
1-676
               

               
Cow position:
               
chr21:12659340-12660015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 267
               

               
Conread position:
               
1-711
               

               
Cow position:
               
chr21:12659256-12659966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 25
               

               
Conread position:
               
1-712
               

               
Cow position:
               
chr21:12659088-12659799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 195
               

               
Conread position:
               
1-714
               

               
Cow position:
               
chr21:12608758-12608045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 116
               

               
Conread position:
               
1-714
               

               
Cow position:
               
chr21:12659004-12659717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 276
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr21:12658836-12659550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 277
               

               
Conread position:
               
1-716
               

               
Cow position:
               
chr21:12659172-12659887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 277
               

               
Conread position:
               
3-473
               

               
Cow position:
               
chr21:12608420-12607950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
130, 134
               

               
Conread position:
               
3-743
               

               
Cow position:
               
chr21:12608840-12608100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 196
               

               
Conread position:
               
6-726
               

               
Cow position:
               
chr21:12658925-12659645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 272
               

               
Conread position:
               
18-721
               

               
Cow position:
               
chr21:12608909-12608208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 185
               

               
Conread position:
               
19-337
               

               
Cow position:
               
chr21:34222862-34222542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
266, 258
               

               
Conread position:
               
34-411
               

               
Cow position:
               
chr21:12608305-12607928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
226, 232
               

               
Conread position:
               
52-712
               

               
Cow position:
               
chr21:12658803-12659463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 310
               

               
Conread position:
               
61-725
               

               
Cow position:
               
chr21:12608614-12607950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 303
               

               
Conread position:
               
81-590
               

               
Cow position:
               
chr21:34223052-34222543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
159, 152
               

               
Conread position:
               
94-623
               

               
Cow position:
               
chr21:12608917-12608388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 201
               

               
Conread position:
               
136-751
               

               
Cow position:
               
chr21:12658803-12659418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 142
               

               
Conread position:
               
200-634
               

               
Cow position:
               
chr21:34223017-34222584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
59, 64
               

               
Conread position:
               
334-687
               

               
Cow position:
               
chr21:12608929-12608576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
289, 282
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr22:11666535-11666959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr22:12418855-12418415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr22:12458268-12457822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr22:11701189-11701645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr22:12418939-12418477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-623
               

               
Cow position:
               
chr22:11640778-11641400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
174, 194
               

               
Conread position:
               
1-678
               

               
Cow position:
               
chr22:12431652-12430974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 111
               

               
Conread position:
               
1-688
               

               
Cow position:
               
chr22:12458520-12457833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
298, 293
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr22:12431736-12431028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
303, 295
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr22:11640694-11641403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr22:12476217-12475508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 114
               

               
Conread position:
               
1-714
               

               
Cow position:
               
chr22:12476049-12475336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 28
               

               
Conread position:
               
1-714
               

               
Cow position:
               
chr22:12499210-12499923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
73, 67
               

               
Conread position:
               
1-716
               

               
Cow position:
               
chr22:12431568-12430853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
580, 604
               

               
Conread position:
               
1-727
               

               
Cow position:
               
chr22:12498958-12499684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
214, 206
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr22:12399756-12399014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
4-715
               

               
Cow position:
               
chr22:12399837-12399126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
142, 137
               

               
Conread position:
               
6-512
               

               
Cow position:
               
chr22:12419018-12418512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 106
               

               
Conread position:
               
13-530
               

               
Cow position:
               
chr22:14429914-14430431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
158, 189
               

               
Conread position:
               
13-725
               

               
Cow position:
               
chr22:12432396-12431684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
613, 603
               

               
Conread position:
               
13-727
               

               
Cow position:
               
chr22:12499138-12499852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
99, 104
               

               
Conread position:
               
13-740
               

               
Cow position:
               
chr22:12476121-12475394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
144, 139
               

               
Conread position:
               
13-743
               

               
Cow position:
               
chr22:12431892-12431162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
454, 446
               

               
Conread position:
               
19-652
               

               
Cow position:
               
chr22:12399402-12398769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
19-716
               

               
Cow position:
               
chr22:11640628-11641325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 91
               

               
Conread position:
               
19-722
               

               
Cow position:
               
chr22:12458586-12457883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
445, 430
               

               
Conread position:
               
19-725
               

               
Cow position:
               
chr22:12476283-12475577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
267, 262
               

               
Conread position:
               
50-670
               

               
Cow position:
               
chr22:14442097-14442715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 88
               

               
Conread position:
               
52-710
               

               
Cow position:
               
chr22:12431769-12431111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
405, 398
               

               
Conread position:
               
58-698
               

               
Cow position:
               
chr22:12432435-12431795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
59-623
               

               
Cow position:
               
chr22:12475907-12475343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
171, 164
               

               
Conread position:
               
61-708
               

               
Cow position:
               
chr22:12498934-12499580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
283, 289
               

               
Conread position:
               
61-713
               

               
Cow position:
               
chr22:12399444-12398792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
61, 67
               

               
Conread position:
               
66-614
               

               
Cow position:
               
chr22:14429883-14430431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 49
               

               
Conread position:
               
75-530
               

               
Cow position:
               
chr22:12458612-12458159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
262, 12
               

               
Conread position:
               
82-531
               

               
Cow position:
               
chr22:14429815-14430264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
96, 121
               

               
Conread position:
               
83-459
               

               
Cow position:
               
chr22:14467977-14468353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
204, 194
               

               
Conread position:
               
90-690
               

               
Cow position:
               
chr22:12419018-12418419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
369, 382
               

               
Conread position:
               
115-725
               

               
Cow position:
               
chr22:12385718-12385106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
22, 18
               

               
Conread position:
               
136-740
               

               
Cow position:
               
chr22:12476334-12475732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
163, 159
               

               
Conread position:
               
136-740
               

               
Cow position:
               
chr22:12498925-12499527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
163, 159
               

               
Conread position:
               
175-687
               

               
Cow position:
               
chr22:12458598-12458086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
41, 36
               

               
Conread position:
               
181-708
               

               
Cow position:
               
chr22:11640622-11641148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 49
               

               
Conread position:
               
211-623
               

               
Cow position:
               
chr22:11666493-11666905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 84
               

               
Conread position:
               
211-707
               

               
Cow position:
               
chr22:11701147-11701643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 94
               

               
Conread position:
               
218-735
               

               
Cow position:
               
chr22:12418974-12418457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
279, 283
               

               
Conread position:
               
262-690
               

               
Cow position:
               
chr22:12458595-12458167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
38, 34
               

               
Conread position:
               
265-707
               

               
Cow position:
               
chr22:11666463-11666905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
160, 96
               

               
Conread position:
               
265-726
               

               
Cow position:
               
chr22:11701117-11701577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
277, 267
               

               
Conread position:
               
302-751
               

               
Cow position:
               
chr22:12432443-12431994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
41, 48
               

               
Conread position:
               
346-712
               

               
Cow position:
               
chr22:12458595-12458229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
349-708
               

               
Cow position:
               
chr22:12419011-12418653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
351, 0
               

               
Conread position:
               
349-738
               

               
Cow position:
               
chr22:12476373-12475983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 97
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr23:25723955-25723713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr23:24546990-24546653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
330, 0
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr23:24560466-24560129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
170, 201
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr23:24639724-24640069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
214, 195
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr23:24522564-24522188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
214, 209
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr23:25626619-25627040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
218, 209
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr23:24639640-24640064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr23:24547158-24546700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 111
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr23:25698568-25698108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
131, 143
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr23:25660239-25660720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
120, 114
               

               
Conread position:
               
1-670
               

               
Cow position:
               
chr23:24560802-24560134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
663, 0
               

               
Conread position:
               
3-689
               

               
Cow position:
               
chr23:25626120-25626803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
123, 109
               

               
Conread position:
               
4-338
               

               
Cow position:
               
chr23:24626399-24626733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 109
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr23:24560547-24560129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
305, 310
               

               
Conread position:
               
5-727
               

               
Cow position:
               
chr23:24639308-24640030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
44, 56
               

               
Conread position:
               
13-459
               

               
Cow position:
               
chr23:25660167-25660613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
207, 196
               

               
Conread position:
               
13-461
               

               
Cow position:
               
chr23:24535861-24535412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
13-569
               

               
Cow position:
               
chr23:24522717-24522164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
370, 107
               

               
Conread position:
               
13-596
               

               
Cow position:
               
chr23:24639484-24640067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 100
               

               
Conread position:
               
13-652
               

               
Cow position:
               
chr23:24639400-24640039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
113, 102
               

               
Conread position:
               
19-566
               

               
Cow position:
               
chr23:25698634-25698087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
19-734
               

               
Cow position:
               
chr23:24560868-24560153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 246
               

               
Conread position:
               
19-743
               

               
Cow position:
               
chr23:24639238-24639962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
128, 122
               

               
Conread position:
               
40-619
               

               
Cow position:
               
chr23:24547287-24546708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
64-708
               

               
Cow position:
               
chr23:24639199-24639842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
73-484
               

               
Cow position:
               
chr23:24522576-24522165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
226, 221
               

               
Conread position:
               
82-506
               

               
Cow position:
               
chr23:24626309-24626733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
85-686
               

               
Cow position:
               
chr23:25626454-25627055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 110
               

               
Conread position:
               
97-727
               

               
Cow position:
               
chr23:24560874-24560244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
149, 169
               

               
Conread position:
               
102-624
               

               
Cow position:
               
chr23:25660172-25660693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 40
               

               
Conread position:
               
145-511
               

               
Cow position:
               
chr23:25724063-25723698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
150-713
               

               
Cow position:
               
chr23:25660135-25660699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
7, 81
               

               
Conread position:
               
159-542
               

               
Cow position:
               
chr23:24626302-24626685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
163-729
               

               
Cow position:
               
chr23:25626028-25626595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
504, 517
               

               
Conread position:
               
166-740
               

               
Cow position:
               
chr23:24639217-24639791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
89, 99
               

               
Conread position:
               
190-482
               

               
Cow position:
               
chr23:24654058-24654350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
227-713
               

               
Cow position:
               
chr23:24547268-24546782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 123
               

               
Conread position:
               
247-671
               

               
Cow position:
               
chr23:24626306-24626731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
264-710
               

               
Cow position:
               
chr23:25660166-25660612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
46, 50
               

               
Conread position:
               
265-570
               

               
Cow position:
               
chr23:24654049-24654355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
286, 267
               

               
Conread position:
               
348-719
               

               
Cow position:
               
chr23:25660166-25660537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
196, 205
               

               
Conread position:
               
377-726
               

               
Cow position:
               
chr23:25625990-25626339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
261, 271
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr24:17077922-17077519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr24:17070630-17071040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
120, 112
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr24:17035367-17034948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
292, 299
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr24:17070462-17070989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
118, 111
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr24:17035619-17035027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
370, 364
               

               
Conread position:
               
1-623
               

               
Cow position:
               
chr24:17035703-17035081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
259, 265
               

               
Conread position:
               
1-625
               

               
Cow position:
               
chr24:17035787-17035163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
1-688
               

               
Cow position:
               
chr24:17036291-17035604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 265
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr24:17036543-17035834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
259, 265
               

               
Conread position:
               
1-727
               

               
Cow position:
               
chr24:17035871-17035145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
52, 40
               

               
Conread position:
               
5-553
               

               
Cow position:
               
chr24:17078086-17077538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
114, 107
               

               
Conread position:
               
12-715
               

               
Cow position:
               
chr24:17036613-17035913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
166, 67
               

               
Conread position:
               
13-475
               

               
Cow position:
               
chr24:17077994-17077532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
22-642
               

               
Cow position:
               
chr24:17078153-17077533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
22-707
               

               
Cow position:
               
chr24:17078321-17077636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 241
               

               
Conread position:
               
82-476
               

               
Cow position:
               
chr24:17070627-17071021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
171, 181
               

               
Conread position:
               
82-734
               

               
Cow position:
               
chr24:17078345-17077693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
255, 265
               

               
Conread position:
               
115-713
               

               
Cow position:
               
chr24:17070408-17071006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 25
               

               
Conread position:
               
200-743
               

               
Cow position:
               
chr24:17070409-17070952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
383, 396
               

               
Conread position:
               
265-530
               

               
Cow position:
               
chr24:17013179-17013444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr25:22236000-22236339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
132, 137
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr25:36844533-36844203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr25:33529101-33529476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr25:24385161-24384770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
146, 125
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr25:33127805-33128215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
117, 109
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr25:36801546-36801956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr25:3636391-3635974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
298, 291
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr25:3664186-3664603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
284, 279
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr25:23420386-23420808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr25:4657462-4657037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr25:36800886-36801332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
85, 78
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr25:33127721-33128177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
453, 445
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr25:33144936-33145391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 29
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr25:34769701-34769243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr25:36801378-36801907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
132, 137
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr25:34473510-34474045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 199
               

               
Conread position:
               
1-543
               

               
Cow position:
               
chr25:3664018-3664560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 200
               

               
Conread position:
               
1-567
               

               
Cow position:
               
chr25:34769869-34769303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 112
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr25:36800718-36801331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-628
               

               
Cow position:
               
chr25:3663934-3664561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr25:33157386-33156752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
1-641
               

               
Cow position:
               
chr25:34447025-34447665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
1-670
               

               
Cow position:
               
chr25:33299154-33299822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
420, 427
               

               
Conread position:
               
1-688
               

               
Cow position:
               
chr25:36800634-36801321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 228
               

               
Conread position:
               
1-708
               

               
Cow position:
               
chr25:25652191-25652897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-708
               

               
Cow position:
               
chr25:25652611-25653317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 216
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr25:34770037-34769323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 114
               

               
Conread position:
               
1-727
               

               
Cow position:
               
chr25:25652527-25653253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 277
               

               
Conread position:
               
1-727
               

               
Cow position:
               
chr25:33298986-33299712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
663, 671
               

               
Conread position:
               
1-727
               

               
Cow position:
               
chr25:36801138-36801852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
1-735
               

               
Cow position:
               
chr25:34763000-34763728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
1-738
               

               
Cow position:
               
chr25:25652443-25653180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 200
               

               
Conread position:
               
1-740
               

               
Cow position:
               
chr25:33298482-33299221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 219
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr25:33298650-33299392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 136
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr25:33299070-33299812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
504, 511
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr25:33506837-33507127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
103, 97
               

               
Conread position:
               
3-372
               

               
Cow position:
               
chr25:25652949-25653318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
212, 204
               

               
Conread position:
               
3-389
               

               
Cow position:
               
chr25:33145022-33145405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
116, 17
               

               
Conread position:
               
3-411
               

               
Cow position:
               
chr25:33530402-33530810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
130, 135
               

               
Conread position:
               
3-488
               

               
Cow position:
               
chr25:24385243-24384758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
3-545
               

               
Cow position:
               
chr25:33530234-33530777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
25, 30
               

               
Conread position:
               
3-548
               

               
Cow position:
               
chr25:3636557-3636012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
3-557
               

               
Cow position:
               
chr25:24385327-24384774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
120, 127
               

               
Conread position:
               
3-695
               

               
Cow position:
               
chr25:34447195-34447880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
303, 289
               

               
Conread position:
               
3-710
               

               
Cow position:
               
chr25:25652277-25652984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 197
               

               
Conread position:
               
3-740
               

               
Cow position:
               
chr25:34762918-34763649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 207
               

               
Conread position:
               
4-319
               

               
Cow position:
               
chr25:33145104-33145419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 45
               

               
Conread position:
               
4-456
               

               
Cow position:
               
chr25:25652866-25653318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
281, 276
               

               
Conread position:
               
4-579
               

               
Cow position:
               
chr25:34763168-34763740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 277
               

               
Conread position:
               
4-727
               

               
Cow position:
               
chr25:33298905-33299628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
537, 543
               

               
Conread position:
               
8-539
               

               
Cow position:
               
chr25:24385406-24384875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
187, 193
               

               
Conread position:
               
12-381
               

               
Cow position:
               
chr25:33506762-33507131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
183, 189
               

               
Conread position:
               
13-343
               

               
Cow position:
               
chr25:34733994-34733663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 124
               

               
Conread position:
               
13-403
               

               
Cow position:
               
chr25:346463-346853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
370, 363
               

               
Conread position:
               
13-512
               

               
Cow position:
               
chr25:33305387-33304893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
13-670
               

               
Cow position:
               
chr25:34446953-34447609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
133, 127
               

               
Conread position:
               
13-715
               

               
Cow position:
               
chr25:34770109-34769407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
464, 468
               

               
Conread position:
               
19-551
               

               
Cow position:
               
chr25:33144870-33145399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
19-715
               

               
Cow position:
               
chr25:326518-327220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
280, 271
               

               
Conread position:
               
19-742
               

               
Cow position:
               
chr25:34446875-34447598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
22-334
               

               
Cow position:
               
chr25:3664291-3664603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
263, 256
               

               
Conread position:
               
22-508
               

               
Cow position:
               
chr25:22235853-22236339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
25-557
               

               
Cow position:
               
chr25:33127661-33128193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
32-539
               

               
Cow position:
               
chr25:34762863-34763367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 167
               

               
Conread position:
               
32-710
               

               
Cow position:
               
chr25:33157523-33156845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
33-506
               

               
Cow position:
               
chr25:23420334-23420807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
24, 33
               

               
Conread position:
               
35-743
               

               
Cow position:
               
chr25:34770171-34769463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
614, 581
               

               
Conread position:
               
47-663
               

               
Cow position:
               
chr25:34763127-34763740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
406, 318
               

               
Conread position:
               
51-679
               

               
Cow position:
               
chr25:33157420-33156792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 86
               

               
Conread position:
               
51-695
               

               
Cow position:
               
chr25:36801344-36801986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
59-677
               

               
Cow position:
               
chr25:34473484-34474099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
17, 12
               

               
Conread position:
               
61-530
               

               
Cow position:
               
chr25:326392-326861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
64-447
               

               
Cow position:
               
chr25:326481-326862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
67-504
               

               
Cow position:
               
chr25:36801528-36801967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
430, 0
               

               
Conread position:
               
69-530
               

               
Cow position:
               
chr25:22235816-22236277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
76-698
               

               
Cow position:
               
chr25:34762821-34763442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 291
               

               
Conread position:
               
81-688
               

               
Cow position:
               
chr25:36800546-36801153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 33
               

               
Conread position:
               
82-497
               

               
Cow position:
               
chr25:3675992-3676407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
119, 111
               

               
Conread position:
               
82-623
               

               
Cow position:
               
chr25:33144849-33145387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
82-713
               

               
Cow position:
               
chr25:25652188-25652819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 148
               

               
Conread position:
               
83-446
               

               
Cow position:
               
chr25:33306461-33306107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 65
               

               
Conread position:
               
83-530
               

               
Cow position:
               
chr25:326330-326777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
93, 86
               

               
Conread position:
               
83-743
               

               
Cow position:
               
chr25:3663932-3664592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 54
               

               
Conread position:
               
84-509
               

               
Cow position:
               
chr25:4657463-4657038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
49, 53
               

               
Conread position:
               
96-698
               

               
Cow position:
               
chr25:33157543-33156941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
97-466
               

               
Cow position:
               
chr25:33506763-33507132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
188, 181
               

               
Conread position:
               
105-666
               

               
Cow position:
               
chr25:33127656-33128220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
106-483
               

               
Cow position:
               
chr25:346472-346849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 105
               

               
Conread position:
               
117-543
               

               
Cow position:
               
chr25:23420334-23420760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 24
               

               
Conread position:
               
129-735
               

               
Cow position:
               
chr25:24385369-24384763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
156, 151
               

               
Conread position:
               
145-742
               

               
Cow position:
               
chr25:33530208-33530805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
56, 52
               

               
Conread position:
               
161-686
               

               
Cow position:
               
chr25:33144844-33145366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
128, 121
               

               
Conread position:
               
161-727
               

               
Cow position:
               
chr25:3663926-3664492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
124, 117
               

               
Conread position:
               
162-740
               

               
Cow position:
               
chr25:36800543-36801121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
92, 76
               

               
Conread position:
               
165-735
               

               
Cow position:
               
chr25:25652187-25652757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
145, 149
               

               
Conread position:
               
166-742
               

               
Cow position:
               
chr25:33298479-33299055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
168-519
               

               
Cow position:
               
chr25:4657463-4657112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
201, 196
               

               
Conread position:
               
180-743
               

               
Cow position:
               
chr25:33157543-33156980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
185-722
               

               
Cow position:
               
chr25:33127654-33128188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
480, 12
               

               
Conread position:
               
246-717
               

               
Cow position:
               
chr25:33298475-33298946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
295, 302
               

               
Conread position:
               
250-743
               

               
Cow position:
               
chr25:25652188-25652681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
253-743
               

               
Cow position:
               
chr25:34473510-34473997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
192, 201
               

               
Conread position:
               
264-741
               

               
Cow position:
               
chr25:22235843-22236321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
270-743
               

               
Cow position:
               
chr25:33127655-33128127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
271-739
               

               
Cow position:
               
chr25:23420320-23420788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
38, 42
               

               
Conread position:
               
349-727
               

               
Cow position:
               
chr25:34732593-34732215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
128, 132
               

               
Conread position:
               
355-729
               

               
Cow position:
               
chr25:4657444-4657070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr28:33210315-33210657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
145, 141
               

               
Conread position:
               
1-586
               

               
Cow position:
               
chr28:34695999-34696584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 145
               

               
Conread position:
               
1-642
               

               
Cow position:
               
chr28:7757671-7758312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-642
               

               
Cow position:
               
chr28:34695915-34696556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 73
               

               
Conread position:
               
1-681
               

               
Cow position:
               
chr28:7758091-7758755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr28:7757419-7758135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
1-726
               

               
Cow position:
               
chr28:7757923-7758632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
84, 75
               

               
Conread position:
               
5-476
               

               
Cow position:
               
chr28:7810355-7810817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
10-734
               

               
Cow position:
               
chr28:7757182-7757900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 129
               

               
Conread position:
               
13-707
               

               
Cow position:
               
chr28:7757515-7758209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 102
               

               
Conread position:
               
19-411
               

               
Cow position:
               
chr28:11333864-11333472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
103, 96
               

               
Conread position:
               
19-479
               

               
Cow position:
               
chr28:7757857-7758318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
19-566
               

               
Cow position:
               
chr28:9253040-9253587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 112
               

               
Conread position:
               
20-726
               

               
Cow position:
               
chr28:34695850-34696556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 138
               

               
Conread position:
               
32-425
               

               
Cow position:
               
chr28:33210262-33210656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
114, 110
               

               
Conread position:
               
60-487
               

               
Cow position:
               
chr28:11333907-11333479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
61-425
               

               
Cow position:
               
chr28:9290315-9290677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 60
               

               
Conread position:
               
61-428
               

               
Cow position:
               
chr28:7810570-7810937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
61-469
               

               
Cow position:
               
chr28:7758387-7758794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 84
               

               
Conread position:
               
61-562
               

               
Cow position:
               
chr28:9290151-9290647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
176, 52
               

               
Conread position:
               
64-645
               

               
Cow position:
               
chr28:11334071-11333490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
196, 200
               

               
Conread position:
               
65-735
               

               
Cow position:
               
chr28:11334154-11333484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
130, 137
               

               
Conread position:
               
73-668
               

               
Cow position:
               
chr28:9253010-9253607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 68
               

               
Conread position:
               
82-509
               

               
Cow position:
               
chr28:33210228-33210656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 148
               

               
Conread position:
               
118-715
               

               
Cow position:
               
chr28:9252971-9253568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 112
               

               
Conread position:
               
189-740
               

               
Cow position:
               
chr28:34695851-34696402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
110, 102
               

               
Conread position:
               
265-715
               

               
Cow position:
               
chr28:34695843-34696293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
118, 110
               

               
Conread position:
               
284-677
               

               
Cow position:
               
chr28:33210262-33210656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
164, 171
               

               
Conread position:
               
286-727
               

               
Cow position:
               
chr28:9252971-9253412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
379, 386
               

               
Conread position:
               
368-744
               

               
Cow position:
               
chr28:33210262-33210639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
176, 180
               

               
Conread position:
               
144-734
               

               
Cow position:
               
chr29:39627446-39626859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 64
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr3:20194449-20194680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
201, 195
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr3:20194893-20195281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr3:62722070-62721610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr3:20194809-20195273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-567
               

               
Cow position:
               
chr3:68045772-68046338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
120, 114
               

               
Conread position:
               
3-556
               

               
Cow position:
               
chr3:20194727-20195279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
450, 442
               

               
Conread position:
               
13-636
               

               
Cow position:
               
chr3:68045700-68046323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 97
               

               
Conread position:
               
82-715
               

               
Cow position:
               
chr3:62722241-62721608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
51, 55
               

               
Conread position:
               
87-641
               

               
Cow position:
               
chr3:20194727-20195281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
46, 50
               

               
Conread position:
               
117-735
               

               
Cow position:
               
chr3:68045720-68046338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
144-641
               

               
Cow position:
               
chr3:68045663-68046160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
72, 67
               

               
Conread position:
               
156-421
               

               
Cow position:
               
chr3:20194436-20194701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
129, 122
               

               
Conread position:
               
171-725
               

               
Cow position:
               
chr3:20194727-20195281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
217-729
               

               
Cow position:
               
chr3:68045652-68046164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 79
               

               
Conread position:
               
255-735
               

               
Cow position:
               
chr3:20194727-20195207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
114, 109
               

               
Conread position:
               
1-498
               

               
Cow position:
               
chr4:65703664-65703167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr4:65121706-65122037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 71
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chr4:65703494-65703163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
128, 134
               

               
Conread position:
               
3-400
               

               
Cow position:
               
chr4:65261547-65261150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
115, 109
               

               
Conread position:
               
3-503
               

               
Cow position:
               
chr4:65494936-65494430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 149
               

               
Conread position:
               
3-725
               

               
Cow position:
               
chr4:65349882-65350601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 58
               

               
Conread position:
               
4-417
               

               
Cow position:
               
chr4:65121623-65122037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
4-418
               

               
Cow position:
               
chr4:65703577-65703163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
129, 133
               

               
Conread position:
               
6-335
               

               
Cow position:
               
chr4:65146428-65146757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-483
               

               
Cow position:
               
chr4:65121543-65122018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
125, 129
               

               
Conread position:
               
10-623
               

               
Cow position:
               
chr4:65350057-65350667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
88, 83
               

               
Conread position:
               
81-583
               

               
Cow position:
               
chr4:65703668-65703166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 64
               

               
Conread position:
               
85-623
               

               
Cow position:
               
chr4:65495022-65494478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
97-567
               

               
Cow position:
               
chr4:65121548-65122018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
99, 106
               

               
Conread position:
               
106-377
               

               
Cow position:
               
chr4:65146444-65146715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
163-503
               

               
Cow position:
               
chr4:65146417-65146757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
169-717
               

               
Cow position:
               
chr4:65495022-65494468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
165, 228
               

               
Conread position:
               
181-708
               

               
Cow position:
               
chr4:65121548-65122075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
108, 99
               

               
Conread position:
               
271-742
               

               
Cow position:
               
chr4:65121554-65122025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
102, 93
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr6:49340995-49341422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
299, 295
               

               
Conread position:
               
1-579
               

               
Cow position:
               
chr6:49396380-49396958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
138, 145
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr6:49396296-49396888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
133, 145
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr6:49428903-49429514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 202
               

               
Conread position:
               
1-667
               

               
Cow position:
               
chr6:49428819-49429486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
369, 361
               

               
Conread position:
               
1-707
               

               
Cow position:
               
chr6:49428231-49428937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-708
               

               
Cow position:
               
chr6:49340659-49341365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
218, 209
               

               
Conread position:
               
1-714
               

               
Cow position:
               
chr6:49428315-49429028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 291
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr6:49340491-49341205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
370, 360
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr6:49428735-49429449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 137
               

               
Conread position:
               
1-721
               

               
Cow position:
               
chr6:49340575-49341295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
289, 281
               

               
Conread position:
               
1-725
               

               
Cow position:
               
chr6:49428399-49429123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 200
               

               
Conread position:
               
1-725
               

               
Cow position:
               
chr6:49428483-49429207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 200
               

               
Conread position:
               
15-708
               

               
Cow position:
               
chr6:49396226-49396918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
247, 238
               

               
Conread position:
               
40-725
               

               
Cow position:
               
chr6:49340362-49341047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
58-710
               

               
Cow position:
               
chr6:49396107-49396753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
172, 120
               

               
Conread position:
               
84-715
               

               
Cow position:
               
chr6:49428230-49428861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
383, 376
               

               
Conread position:
               
143-711
               

               
Cow position:
               
chr6:49428203-49428773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr7:18390333-18390743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr7:28846594-28847055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 65
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr7:42878937-42878227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 201
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr7:1014690-1015404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
17-461
               

               
Cow position:
               
chr7:18390265-18390709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-530
               

               
Cow position:
               
chr7:28846441-28846955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 201
               

               
Conread position:
               
19-193
               

               
Cow position:
               
chr7:16643334-16643508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-717
               

               
Cow position:
               
chr7:42879087-42878389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
522, 529
               

               
Conread position:
               
22-678
               

               
Cow position:
               
chr7:3179721-3180378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
100, 93
               

               
Conread position:
               
50-530
               

               
Cow position:
               
chr7:3180253-3180733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
210, 216
               

               
Conread position:
               
58-736
               

               
Cow position:
               
chr7:3180009-3180685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
88, 84
               

               
Conread position:
               
64-715
               

               
Cow position:
               
chr7:1014669-1015320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
74-727
               

               
Cow position:
               
chr7:42879284-42878631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
51, 36
               

               
Conread position:
               
81-681
               

               
Cow position:
               
chr7:18390161-18390761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
85-743
               

               
Cow position:
               
chr7:42879189-42878531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 52
               

               
Conread position:
               
96-713
               

               
Cow position:
               
chr7:28846437-28847054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
118, 132
               

               
Conread position:
               
100-305
               

               
Cow position:
               
chr7:16643331-16643536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
106-726
               

               
Cow position:
               
chr7:3179721-3180339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
68, 97
               

               
Conread position:
               
180-389
               

               
Cow position:
               
chr7:16643327-16643536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
190-680
               

               
Cow position:
               
chr7:42879252-42878762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
351, 358
               

               
Conread position:
               
229-715
               

               
Cow position:
               
chr7:18390225-18390711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
70, 66
               

               
Conread position:
               
240-727
               

               
Cow position:
               
chr7:42879284-42878799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
245-725
               

               
Cow position:
               
chr7:18390157-18390637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
271-451
               

               
Cow position:
               
chr7:16643334-16643514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
329-710
               

               
Cow position:
               
chr7:18390157-18390538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
336, 343
               

               
Conread position:
               
355-529
               

               
Cow position:
               
chr7:16643334-16643508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr8:45201525-45201944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
34, 28
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr8:45201441-45201913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr8:55581077-55581628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-652
               

               
Cow position:
               
chr8:46816720-46817371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr8:55580909-55581623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
217, 229
               

               
Conread position:
               
1-725
               

               
Cow position:
               
chr8:46816048-46816772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 38
               

               
Conread position:
               
1-728
               

               
Cow position:
               
chr8:46816636-46817363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
132, 144
               

               
Conread position:
               
3-681
               

               
Cow position:
               
chr8:48407457-48406779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
257, 263
               

               
Conread position:
               
13-713
               

               
Cow position:
               
chr8:46816564-46817263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 63
               

               
Conread position:
               
13-715
               

               
Cow position:
               
chr8:55580837-55581539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
287, 282
               

               
Conread position:
               
13-716
               

               
Cow position:
               
chr8:45201201-45201904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
529, 517
               

               
Conread position:
               
19-482
               

               
Cow position:
               
chr8:55581263-55581726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
160, 183
               

               
Conread position:
               
19-708
               

               
Cow position:
               
chr8:46816318-46817007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
11, 15
               

               
Conread position:
               
40-715
               

               
Cow position:
               
chr8:48407673-48406997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 479
               

               
Conread position:
               
52-713
               

               
Cow position:
               
chr8:48407156-48406495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 75
               

               
Conread position:
               
61-728
               

               
Cow position:
               
chr8:45201165-45201832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
205, 192
               

               
Conread position:
               
74-478
               

               
Cow position:
               
chr8:48406714-48406310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
82-708
               

               
Cow position:
               
chr8:46816213-46816838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
84-728
               

               
Cow position:
               
chr8:45200936-45201580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
106-713
               

               
Cow position:
               
chr8:48407522-48406915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
154, 159
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chrX:14181303-14180931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
117, 108
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chrX:25324744-25324288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
54, 45
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chrX:13826777-13826320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
229, 216
               

               
Conread position:
               
1-616
               

               
Cow position:
               
chrX:14181555-14180940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
145, 111
               

               
Conread position:
               
1-688
               

               
Cow position:
               
chrX:14181639-14180952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
1-708
               

               
Cow position:
               
chrX:25325248-25324542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
1-726
               

               
Cow position:
               
chrX:25325164-25324439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
1-726
               

               
Cow position:
               
chrX:25325332-25324607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 40
               

               
Conread position:
               
3-457
               

               
Cow position:
               
chrX:14181385-14180931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
4-597
               

               
Cow position:
               
chrX:25309980-25310573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
141, 137
               

               
Conread position:
               
6-566
               

               
Cow position:
               
chrX:25324823-25324263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
19-634
               

               
Cow position:
               
chrX:13826843-13826229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
197, 203
               

               
Conread position:
               
61-740
               

               
Cow position:
               
chrX:25309869-25310548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
66, 49
               

               
Conread position:
               
78-688
               

               
Cow position:
               
chrX:13826952-13826342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
108-717
               

               
Cow position:
               
chrX:29045318-29044709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
181, 174
               

               
Conread position:
               
210-681
               

               
Cow position:
               
chrX:25309766-25310237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
83, 89
               

               
Conread position:
               
326-727
               

               
Cow position:
               
chrX:25325595-25325194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
48, 40