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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8063D21.3
        

               
Conread position:
               
808-1034
               

               
Cow position:
               
chr1:43703463-43703250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
810-1026
               

               
Cow position:
               
chr1:60281424-60281222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
160, 71
               

               
Conread position:
               
811-980
               

               
Cow position:
               
chr1:22394853-22394687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
159, 65
               

               
Conread position:
               
816-980
               

               
Cow position:
               
chr1:32001269-32001429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr1:53369257-53369072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr1:85596990-85596805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 66
               

               
Conread position:
               
820-1009
               

               
Cow position:
               
chr1:100512651-100512463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
821-981
               

               
Cow position:
               
chr1:56477632-56477478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
821-1009
               

               
Cow position:
               
chr1:42545739-42545919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
821-1017
               

               
Cow position:
               
chr1:6788243-6788426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
822-967
               

               
Cow position:
               
chr1:71796271-71796408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr1:5637020-5637184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr1:36875069-36874906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
822-981
               

               
Cow position:
               
chr1:92996852-92997005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-988
               

               
Cow position:
               
chr1:34771464-34771620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1001
               

               
Cow position:
               
chr1:15333934-15333755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
145, 80
               

               
Conread position:
               
822-1002
               

               
Cow position:
               
chr1:53374472-53374305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 40
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr1:87095175-87095358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 68
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr1:98413811-98413639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr1:43872280-43872463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
148, 161
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr1:4032671-4032492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr1:4291206-4291025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr1:4374298-4374472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr1:16060965-16061154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
55, 70
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr1:31607849-31608030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
148, 54
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr1:34856589-34856770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr1:40531064-40531250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr1:44507012-44506834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr1:54199340-54199517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 38
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr1:54258606-54258430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr1:57297521-57297340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
145, 60
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr1:72068796-72068972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr1:74084149-74084330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr1:81228295-81228473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr1:86113361-86113544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
158, 44
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr1:91066112-91066286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr1:101267964-101268142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 30
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr1:77880691-77880871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr1:102349707-102349890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
822-1036
               

               
Cow position:
               
chr1:79165043-79165243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1038
               

               
Cow position:
               
chr1:42398152-42398356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr1:55428917-55429116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr1:64804063-64804264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr1:73561608-73561810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr1:82337737-82337941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr1:90641076-90640868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1040
               

               
Cow position:
               
chr1:97696786-97696579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
822-1044
               

               
Cow position:
               
chr1:22448542-22448751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1044
               

               
Cow position:
               
chr1:53308350-53308556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
822-1044
               

               
Cow position:
               
chr1:53370122-53369915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
824-1010
               

               
Cow position:
               
chr1:47886443-47886622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr1:98311106-98310932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
142, 56
               

               
Conread position:
               
825-1012
               

               
Cow position:
               
chr1:51445922-51445744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
145, 27
               

               
Conread position:
               
825-1040
               

               
Cow position:
               
chr1:71228129-71227919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
95, 71
               

               
Conread position:
               
826-1039
               

               
Cow position:
               
chr1:28563531-28563729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
826-1039
               

               
Cow position:
               
chr1:74927919-74927720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
828-1005
               

               
Cow position:
               
chr1:81471166-81471004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
829-1017
               

               
Cow position:
               
chr1:26702171-26702348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
174, 52
               

               
Conread position:
               
830-1010
               

               
Cow position:
               
chr1:51684838-51684667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr10:50183025-50183212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
816-1012
               

               
Cow position:
               
chr10:49045861-49045673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
154, 65
               

               
Conread position:
               
821-979
               

               
Cow position:
               
chr10:49038595-49038442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
822-973
               

               
Cow position:
               
chr10:31005007-31005149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr10:16645177-16645348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr10:48408381-48408549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
822-1005
               

               
Cow position:
               
chr10:16986341-16986171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
822-1005
               

               
Cow position:
               
chr10:25149908-25149735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr10:19372327-19372497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr10:30455824-30456015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr10:33195051-33194859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr10:2202112-2202287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr10:49169026-49169216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 154
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr10:52113660-52113832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
148, 44
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr10:4184205-4184028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr10:17844776-17844600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr10:20372115-20372291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
145, 58
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr10:21462256-21462074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr10:22341587-22341405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr10:31374079-31374258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr10:37014643-37014472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr10:41254561-41254735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr10:41626605-41626426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
152, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr10:50015988-50016169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
65, 108
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr10:53247991-53248175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
148, 74
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr10:54848791-54848613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 62
               

               
Conread position:
               
822-1011
               

               
Cow position:
               
chr10:46492985-46493168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr10:15868261-15868071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
146, 59
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr10:54731031-54730824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 54
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr10:55122816-55122603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 61
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr10:63276403-63276199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr10:11463660-11463830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
145, 27
               

               
Conread position:
               
825-1035
               

               
Cow position:
               
chr10:1088036-1087832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
145, 77
               

               
Conread position:
               
826-978
               

               
Cow position:
               
chr10:6664039-6663890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
144, 57
               

               
Conread position:
               
826-1012
               

               
Cow position:
               
chr10:9656517-9656706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
62, 166
               

               
Conread position:
               
826-1031
               

               
Cow position:
               
chr10:26209242-26209442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
826-1039
               

               
Cow position:
               
chr10:721309-721112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
827-1010
               

               
Cow position:
               
chr10:48316942-48317120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
828-980
               

               
Cow position:
               
chr10:37442311-37442167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
142, 54
               

               
Conread position:
               
828-1010
               

               
Cow position:
               
chr10:37444214-37444385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
142, 54
               

               
Conread position:
               
828-1036
               

               
Cow position:
               
chr10:36285507-36285312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
142, 70
               

               
Conread position:
               
831-1012
               

               
Cow position:
               
chr10:57457336-57457170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
838-1009
               

               
Cow position:
               
chr10:20505539-20505376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
839-1013
               

               
Cow position:
               
chr10:19402931-19402768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
131, 42
               

               
Conread position:
               
902-1009
               

               
Cow position:
               
chr10:17983127-17983020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 87
               

               
Conread position:
               
810-1010
               

               
Cow position:
               
chr11:66188289-66188478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
811-972
               

               
Cow position:
               
chr11:27719292-27719446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
115, 72
               

               
Conread position:
               
819-986
               

               
Cow position:
               
chr11:33345464-33345307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
819-1010
               

               
Cow position:
               
chr11:10076787-10076608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
150, 58
               

               
Conread position:
               
821-1036
               

               
Cow position:
               
chr11:15772697-15772901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
99, 18
               

               
Conread position:
               
822-973
               

               
Cow position:
               
chr11:18341025-18341165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
822-986
               

               
Cow position:
               
chr11:81168011-81168170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr11:26144080-26144250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 58
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr11:38874386-38874557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr11:83397921-83397746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr11:30597009-30596830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr11:61454500-61454688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr11:377626-377803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr11:9270708-9270885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr11:23138039-23138219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr11:38236267-38236086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
148, 79
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr11:61958728-61958904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr11:62979506-62979323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr11:70273322-70273143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr11:70483836-70484016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
85, 50
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr11:30708522-30708339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
152, 59
               

               
Conread position:
               
822-1014
               

               
Cow position:
               
chr11:71868587-71868770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
822-1031
               

               
Cow position:
               
chr11:13500031-13499835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
145, 26
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr11:27913300-27913089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr11:32436350-32436147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr11:62155654-62155440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
822-1044
               

               
Cow position:
               
chr11:27932291-27932080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
148, 100
               

               
Conread position:
               
823-992
               

               
Cow position:
               
chr11:36658804-36658964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
823-1029
               

               
Cow position:
               
chr11:53130828-53130635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
146, 53
               

               
Conread position:
               
825-980
               

               
Cow position:
               
chr11:29946901-29947063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
825-1003
               

               
Cow position:
               
chr11:75480007-75480179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 56
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr11:2084156-2083979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr11:22931958-22932132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
145, 57
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr11:27386326-27386503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
145, 57
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr11:70086347-70086167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
149, 56
               

               
Conread position:
               
826-1010
               

               
Cow position:
               
chr11:30925168-30924992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 72
               

               
Conread position:
               
826-1013
               

               
Cow position:
               
chr11:56654567-56654388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
828-1010
               

               
Cow position:
               
chr11:64638515-64638691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
142, 53
               

               
Conread position:
               
829-1004
               

               
Cow position:
               
chr11:48042026-48042191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
829-1010
               

               
Cow position:
               
chr11:30120651-30120823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
141, 53
               

               
Conread position:
               
831-1006
               

               
Cow position:
               
chr11:68909839-68910004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 66
               

               
Conread position:
               
833-1010
               

               
Cow position:
               
chr11:15525972-15525796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
137, 51
               

               
Conread position:
               
838-1009
               

               
Cow position:
               
chr11:8105785-8105625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
838-1010
               

               
Cow position:
               
chr11:12555406-12555576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
132, 16
               

               
Conread position:
               
843-1038
               

               
Cow position:
               
chr11:5211734-5211929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
127, 53
               

               
Conread position:
               
896-1010
               

               
Cow position:
               
chr11:68570713-68570831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
904-1000
               

               
Cow position:
               
chr11:54334278-54334184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
821-1010
               

               
Cow position:
               
chr12:8868879-8869055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
149, 56
               

               
Conread position:
               
821-1042
               

               
Cow position:
               
chr12:23855835-23855626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
822-978
               

               
Cow position:
               
chr12:23916841-23916692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
822-979
               

               
Cow position:
               
chr12:4719942-4719794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr12:42181134-42181291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
56, 71
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr12:5801035-5800857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr12:11587769-11587589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr12:35368637-35368463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1011
               

               
Cow position:
               
chr12:40910294-40910468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr12:27563382-27563588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
826-1010
               

               
Cow position:
               
chr12:22540198-22540022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
100, 55
               

               
Conread position:
               
826-1012
               

               
Cow position:
               
chr12:4162372-4162547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
827-1006
               

               
Cow position:
               
chr12:34385517-34385688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
829-1009
               

               
Cow position:
               
chr12:15938275-15938451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
140, 52
               

               
Conread position:
               
829-1029
               

               
Cow position:
               
chr12:27562840-27563030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
140, 23
               

               
Conread position:
               
839-1010
               

               
Cow position:
               
chr12:3039489-3039322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
131, 42
               

               
Conread position:
               
901-1029
               

               
Cow position:
               
chr12:27639171-27639297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 82
               

               
Conread position:
               
904-1012
               

               
Cow position:
               
chr12:42254591-42254481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
811-968
               

               
Cow position:
               
chr13:42229246-42229406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 135
               

               
Conread position:
               
817-1012
               

               
Cow position:
               
chr13:8652495-8652311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
153, 63
               

               
Conread position:
               
818-1010
               

               
Cow position:
               
chr13:22115642-22115837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
820-1004
               

               
Cow position:
               
chr13:30026059-30026235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
822-979
               

               
Cow position:
               
chr13:10924969-10924814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 73
               

               
Conread position:
               
822-986
               

               
Cow position:
               
chr13:3989149-3989309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 78
               

               
Conread position:
               
822-998
               

               
Cow position:
               
chr13:15445993-15446160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr13:4420294-4420466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
148, 67
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr13:45352983-45353167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 161
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr13:20650034-20649855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr13:44003653-44003846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr13:8524666-8524496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr13:26369475-26369651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr13:37592994-37592813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr13:60974027-60974208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 70
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr13:2463283-2463100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
147, 60
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr13:18166684-18166860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1034
               

               
Cow position:
               
chr13:12876023-12875822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
825-980
               

               
Cow position:
               
chr13:15621765-15621914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
145, 14
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr13:5758387-5758216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
826-1029
               

               
Cow position:
               
chr13:14771408-14771600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
826-1039
               

               
Cow position:
               
chr13:1043013-1042809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 55
               

               
Conread position:
               
827-1039
               

               
Cow position:
               
chr13:7789964-7790166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
831-1009
               

               
Cow position:
               
chr13:16711588-16711754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
139, 47
               

               
Conread position:
               
831-1010
               

               
Cow position:
               
chr13:24155490-24155674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
831-1010
               

               
Cow position:
               
chr13:25531831-25531663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
133, 52
               

               
Conread position:
               
837-1009
               

               
Cow position:
               
chr13:36714782-36714944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
133, 6
               

               
Conread position:
               
838-1012
               

               
Cow position:
               
chr13:20042002-20041835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
846-989
               

               
Cow position:
               
chr13:13533703-13533558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
904-1009
               

               
Cow position:
               
chr13:61170698-61170595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 86
               

               
Conread position:
               
809-1004
               

               
Cow position:
               
chr14:36289808-36289624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
822-967
               

               
Cow position:
               
chr14:32732757-32732900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 80
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr14:22941719-22941565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
822-982
               

               
Cow position:
               
chr14:29592717-29592565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 26
               

               
Conread position:
               
822-993
               

               
Cow position:
               
chr14:35503371-35503533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr14:33341763-33341934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr14:39037230-39037412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr14:27076986-27077163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 78
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr14:13006513-13006693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
145, 30
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr14:19129515-19129693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr14:32452258-32452435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr14:33538927-33538738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
82, 163
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr14:44084480-44084297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 53
               

               
Conread position:
               
822-1011
               

               
Cow position:
               
chr14:18309298-18309116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
822-1018
               

               
Cow position:
               
chr14:10609689-10609881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr14:28115178-28114977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr14:50362803-50363007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
145, 54
               

               
Conread position:
               
825-1039
               

               
Cow position:
               
chr14:18657595-18657392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
145, 34
               

               
Conread position:
               
826-1009
               

               
Cow position:
               
chr14:4227209-4227022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 162
               

               
Conread position:
               
826-1034
               

               
Cow position:
               
chr14:28378372-28378573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
836-1012
               

               
Cow position:
               
chr14:8754342-8754513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
134, 66
               

               
Conread position:
               
837-1036
               

               
Cow position:
               
chr14:44383185-44382996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
133, 43
               

               
Conread position:
               
839-1010
               

               
Cow position:
               
chr14:27312449-27312608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
131, 40
               

               
Conread position:
               
842-1010
               

               
Cow position:
               
chr14:37435274-37435113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
163, 39
               

               
Conread position:
               
816-1009
               

               
Cow position:
               
chr15:16616236-16616429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 126
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr15:22136733-22136911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
158, 65
               

               
Conread position:
               
816-1029
               

               
Cow position:
               
chr15:50341163-50341367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
817-981
               

               
Cow position:
               
chr15:39326465-39326310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
153, 42
               

               
Conread position:
               
818-1009
               

               
Cow position:
               
chr15:13387129-13387307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
152, 15
               

               
Conread position:
               
822-972
               

               
Cow position:
               
chr15:36793438-36793298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr15:47843195-47843046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
822-988
               

               
Cow position:
               
chr15:21893834-21893993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-999
               

               
Cow position:
               
chr15:16448739-16448907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 54
               

               
Conread position:
               
822-1001
               

               
Cow position:
               
chr15:225748-225586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1003
               

               
Cow position:
               
chr15:5566980-5567164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
79, 159
               

               
Conread position:
               
822-1003
               

               
Cow position:
               
chr15:10660499-10660322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr15:21582868-21582694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 41
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr15:19119555-19119376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr15:26919219-26919050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr15:50322650-50322823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr15:794965-794788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr15:37716877-37716696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1015
               

               
Cow position:
               
chr15:16667447-16667269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
822-1031
               

               
Cow position:
               
chr15:32324152-32323956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
148, 57
               

               
Conread position:
               
822-1037
               

               
Cow position:
               
chr15:10608250-10608052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr15:20459252-20459044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 62
               

               
Conread position:
               
823-968
               

               
Cow position:
               
chr15:35441025-35440885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
825-1000
               

               
Cow position:
               
chr15:26573438-26573597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr15:20370396-20370228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr15:26903248-26903425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr15:39621397-39621573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
137, 57
               

               
Conread position:
               
826-1010
               

               
Cow position:
               
chr15:20534390-20534216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
829-1010
               

               
Cow position:
               
chr15:21420999-21421172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
832-1010
               

               
Cow position:
               
chr15:16936782-16936612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
138, 59
               

               
Conread position:
               
852-1010
               

               
Cow position:
               
chr15:36621495-36621646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 29
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr16:8522342-8522535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr16:16096780-16096596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
154, 66
               

               
Conread position:
               
819-1012
               

               
Cow position:
               
chr16:8076465-8076650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
151, 60
               

               
Conread position:
               
820-1039
               

               
Cow position:
               
chr16:13791553-13791350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
150, 54
               

               
Conread position:
               
821-1010
               

               
Cow position:
               
chr16:11957543-11957724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
149, 56
               

               
Conread position:
               
821-1010
               

               
Cow position:
               
chr16:39646580-39646409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
149, 54
               

               
Conread position:
               
821-1017
               

               
Cow position:
               
chr16:11008380-11008198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
822-978
               

               
Cow position:
               
chr16:54226563-54226711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-993
               

               
Cow position:
               
chr16:50667325-50667157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-997
               

               
Cow position:
               
chr16:48086834-48087000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr16:37117109-37116937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 47
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr16:42733977-42734147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr16:15370720-15370540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 69
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr16:4910491-4910671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr16:14758772-14758592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
86, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr16:34153533-34153714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
148, 50
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr16:38243629-38243802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
148, 18
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr16:42633710-42633895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr16:43308527-43308705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
148, 28
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr16:48145368-48145547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr16:49169347-49169525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
138, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr16:49229734-49229911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr16:52889376-52889548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1011
               

               
Cow position:
               
chr16:22842023-22842200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
822-1011
               

               
Cow position:
               
chr16:49125495-49125669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
148, 45
               

               
Conread position:
               
822-1013
               

               
Cow position:
               
chr16:7550002-7549825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1029
               

               
Cow position:
               
chr16:43661484-43661287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
85, 58
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr16:2223363-2223570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr16:21369522-21369317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
147, 60
               

               
Conread position:
               
823-1036
               

               
Cow position:
               
chr16:17982104-17982306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
147, 58
               

               
Conread position:
               
825-1006
               

               
Cow position:
               
chr16:37452583-37452754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
826-1004
               

               
Cow position:
               
chr16:40446292-40446118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
826-1009
               

               
Cow position:
               
chr16:9933191-9933020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
141, 55
               

               
Conread position:
               
826-1010
               

               
Cow position:
               
chr16:5726964-5726782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
52, 78
               

               
Conread position:
               
827-1009
               

               
Cow position:
               
chr16:56912684-56912856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
827-1010
               

               
Cow position:
               
chr16:7542315-7542143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
147, 12
               

               
Conread position:
               
829-971
               

               
Cow position:
               
chr16:30186672-30186539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
829-1010
               

               
Cow position:
               
chr16:54084063-54083895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
141, 59
               

               
Conread position:
               
829-1039
               

               
Cow position:
               
chr16:7665664-7665468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
830-1010
               

               
Cow position:
               
chr16:31558931-31558752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
838-1010
               

               
Cow position:
               
chr16:42253540-42253708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
132, 54
               

               
Conread position:
               
841-968
               

               
Cow position:
               
chr16:13107089-13107217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
844-1039
               

               
Cow position:
               
chr16:9136193-9136009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
126, 47
               

               
Conread position:
               
769-1009
               

               
Cow position:
               
chr17:33271550-33271786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr17:26000204-26000018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
816-1039
               

               
Cow position:
               
chr17:20992955-20993166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
818-1009
               

               
Cow position:
               
chr17:26183306-26183121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
156, 63
               

               
Conread position:
               
821-1012
               

               
Cow position:
               
chr17:5900444-5900266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
97, 61
               

               
Conread position:
               
821-1012
               

               
Cow position:
               
chr17:7654377-7654556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr17:1469453-1469303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
822-1001
               

               
Cow position:
               
chr17:23798355-23798189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
822-1003
               

               
Cow position:
               
chr17:18860647-18860815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr17:6329189-6329019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr17:21292968-21293137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr17:26231028-26230848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr17:18720373-18720551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr17:1493075-1493254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr17:12289335-12289514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr17:17410367-17410190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr17:18146259-18146084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr17:30665346-30665171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr17:38362909-38363085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
32, 62
               

               
Conread position:
               
822-1029
               

               
Cow position:
               
chr17:24077477-24077284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
145, 41
               

               
Conread position:
               
825-998
               

               
Cow position:
               
chr17:1466357-1466521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
145, 19
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr17:7132369-7132550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
145, 82
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr17:12059022-12059193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr17:14003896-14003719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
825-1017
               

               
Cow position:
               
chr17:28540101-28539923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
826-1010
               

               
Cow position:
               
chr17:11832045-11832218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
144, 54
               

               
Conread position:
               
827-999
               

               
Cow position:
               
chr17:2810697-2810526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
134, 54
               

               
Conread position:
               
827-1009
               

               
Cow position:
               
chr17:11362254-11362080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
139, 48
               

               
Conread position:
               
828-1039
               

               
Cow position:
               
chr17:22564256-22564055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
831-1006
               

               
Cow position:
               
chr17:12946284-12946459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
50, 69
               

               
Conread position:
               
834-1031
               

               
Cow position:
               
chr17:13143626-13143809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
136, 49
               

               
Conread position:
               
816-1009
               

               
Cow position:
               
chr18:3044455-3044263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
174, 67
               

               
Conread position:
               
819-1009
               

               
Cow position:
               
chr18:36098215-36098030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
139, 58
               

               
Conread position:
               
819-1010
               

               
Cow position:
               
chr18:10861427-10861610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
151, 7
               

               
Conread position:
               
821-1010
               

               
Cow position:
               
chr18:51676088-51676268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 55
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr18:5632268-5632118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
148, 57
               

               
Conread position:
               
822-996
               

               
Cow position:
               
chr18:51643365-51643528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr18:4182187-4182354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr18:3209726-3209546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
81, 61
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr18:52635070-52635253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
145, 73
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr18:56159462-56159289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr18:219340-219160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
142, 55
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr18:3211878-3211699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr18:17005260-17005082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr18:26998885-26998696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr18:35636346-35636523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr18:48828774-48828954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr18:50974294-50974468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr18:51405906-51406083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
103, 46
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr18:1144183-1144390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
826-1011
               

               
Cow position:
               
chr18:51656046-51656222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
141, 55
               

               
Conread position:
               
827-1003
               

               
Cow position:
               
chr18:56190966-56191136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 74
               

               
Conread position:
               
829-1011
               

               
Cow position:
               
chr18:37023558-37023726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
141, 6
               

               
Conread position:
               
832-1002
               

               
Cow position:
               
chr18:24022378-24022208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 52
               

               
Conread position:
               
832-1012
               

               
Cow position:
               
chr18:52472494-52472323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
833-1006
               

               
Cow position:
               
chr18:3150334-3150508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
44, 85
               

               
Conread position:
               
834-1010
               

               
Cow position:
               
chr18:36297025-36297205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
135, 58
               

               
Conread position:
               
836-1006
               

               
Cow position:
               
chr18:3709022-3708853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
838-1006
               

               
Cow position:
               
chr18:45185740-45185577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 45
               

               
Conread position:
               
902-1039
               

               
Cow position:
               
chr18:29188946-29188810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
904-1010
               

               
Cow position:
               
chr18:5189758-5189865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr19:8963407-8962899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 116
               

               
Conread position:
               
540-763
               

               
Cow position:
               
chr19:8962460-8962232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 96
               

               
Conread position:
               
816-1012
               

               
Cow position:
               
chr19:22153814-22154010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
821-1009
               

               
Cow position:
               
chr19:4503246-4503067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
120, 61
               

               
Conread position:
               
821-1010
               

               
Cow position:
               
chr19:7404353-7404531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
822-973
               

               
Cow position:
               
chr19:729720-729862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr19:12094033-12093877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr19:39622766-39622928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
822-995
               

               
Cow position:
               
chr19:2221053-2221219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr19:51285662-51285486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr19:6079336-6079512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 57
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr19:7543436-7543255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
132, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr19:19919439-19919612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr19:21816989-21816811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
147, 55
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr19:46094614-46094790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr19:31824988-31825166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
142, 59
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr19:47859293-47859468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
822-1029
               

               
Cow position:
               
chr19:34166393-34166195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr19:24137285-24137084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr19:32451107-32450904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
94, 59
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr19:36845272-36845070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
824-1010
               

               
Cow position:
               
chr19:55957551-55957727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 15
               

               
Conread position:
               
825-986
               

               
Cow position:
               
chr19:51751146-51751301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
825-1006
               

               
Cow position:
               
chr19:14928637-14928803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
825-1009
               

               
Cow position:
               
chr19:11443008-11442831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
826-1009
               

               
Cow position:
               
chr19:13267170-13267343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
110, 54
               

               
Conread position:
               
826-1012
               

               
Cow position:
               
chr19:42564163-42563983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
144, 74
               

               
Conread position:
               
827-1003
               

               
Cow position:
               
chr19:31595318-31595155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
143, 54
               

               
Conread position:
               
827-1039
               

               
Cow position:
               
chr19:21335588-21335790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
143, 56
               

               
Conread position:
               
830-1006
               

               
Cow position:
               
chr19:50237448-50237615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
140, 47
               

               
Conread position:
               
834-1009
               

               
Cow position:
               
chr19:51334691-51334521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
843-1029
               

               
Cow position:
               
chr19:41517895-41518080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
46, 141
               

               
Conread position:
               
813-1039
               

               
Cow position:
               
chr2:57393250-57393460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
157, 6
               

               
Conread position:
               
816-1003
               

               
Cow position:
               
chr2:36017367-36017547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr2:45367340-45367155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
816-1039
               

               
Cow position:
               
chr2:30817014-30816793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
819-1006
               

               
Cow position:
               
chr2:41954923-41954748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
151, 62
               

               
Conread position:
               
822-968
               

               
Cow position:
               
chr2:39228850-39228707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
822-976
               

               
Cow position:
               
chr2:14626625-14626472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 13
               

               
Conread position:
               
822-978
               

               
Cow position:
               
chr2:29734860-29734711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
822-981
               

               
Cow position:
               
chr2:12051189-12051037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
822-991
               

               
Cow position:
               
chr2:40597612-40597455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-999
               

               
Cow position:
               
chr2:70945438-70945274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1000
               

               
Cow position:
               
chr2:49467663-49467494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr2:39662739-39662568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
148, 57
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr2:69367093-69367263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr2:42970148-42969970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
153, 57
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr2:15250216-15250043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr2:59397019-59397194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
148, 69
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr2:15298573-15298397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr2:19294628-19294455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr2:44025414-44025233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr2:44081471-44081297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr2:45470041-45469868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr2:70674760-70674587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
822-1011
               

               
Cow position:
               
chr2:66480152-66480328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr2:32660211-32660033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 55
               

               
Conread position:
               
822-1016
               

               
Cow position:
               
chr2:50565968-50565781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1029
               

               
Cow position:
               
chr2:72527994-72527799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1029
               

               
Cow position:
               
chr2:76340617-76340816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
46, 54
               

               
Conread position:
               
822-1036
               

               
Cow position:
               
chr2:19594756-19594553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
825-980
               

               
Cow position:
               
chr2:46406357-46406205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 57
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr2:21704-21877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
145, 42
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr2:6039044-6038864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr2:11412630-11412452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr2:24859044-24858863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr2:28118532-28118359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
825-1012
               

               
Cow position:
               
chr2:80839097-80839272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
145, 58
               

               
Conread position:
               
825-1029
               

               
Cow position:
               
chr2:42183403-42183209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
145, 55
               

               
Conread position:
               
825-1032
               

               
Cow position:
               
chr2:69238310-69238106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
136, 56
               

               
Conread position:
               
826-1009
               

               
Cow position:
               
chr2:81894311-81894490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
826-1010
               

               
Cow position:
               
chr2:38273580-38273402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
144, 65
               

               
Conread position:
               
828-1006
               

               
Cow position:
               
chr2:29269096-29268924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
141, 75
               

               
Conread position:
               
828-1010
               

               
Cow position:
               
chr2:7524104-7524276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
142, 50
               

               
Conread position:
               
833-1010
               

               
Cow position:
               
chr2:56102431-56102605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
834-1017
               

               
Cow position:
               
chr2:69250643-69250823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
136, 58
               

               
Conread position:
               
841-1010
               

               
Cow position:
               
chr2:21407938-21407781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
129, 41
               

               
Conread position:
               
843-1010
               

               
Cow position:
               
chr2:39058877-39058714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
813-1013
               

               
Cow position:
               
chr20:11482049-11482235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
157, 68
               

               
Conread position:
               
815-1006
               

               
Cow position:
               
chr20:9537222-9537041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
155, 65
               

               
Conread position:
               
819-997
               

               
Cow position:
               
chr20:9473535-9473704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
151, 20
               

               
Conread position:
               
819-1017
               

               
Cow position:
               
chr20:31069718-31069530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
167, 62
               

               
Conread position:
               
822-1001
               

               
Cow position:
               
chr20:36040550-36040382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
152, 59
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr20:24000721-24000890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr20:6240444-6240614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr20:34001313-34001492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr20:17251793-17251613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 17
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr20:10200422-10200250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr20:13967180-13967357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr20:20739211-20739389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
122, 20
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr20:35797688-35797512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr20:28067343-28067525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
94, 55
               

               
Conread position:
               
822-1029
               

               
Cow position:
               
chr20:31289586-31289383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
152, 59
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr20:34251597-34251807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr20:20202065-20201889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
826-1006
               

               
Cow position:
               
chr20:27003652-27003827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
144, 70
               

               
Conread position:
               
826-1011
               

               
Cow position:
               
chr20:22704367-22704194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
827-1009
               

               
Cow position:
               
chr20:12995934-12996105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
143, 49
               

               
Conread position:
               
827-1009
               

               
Cow position:
               
chr20:24711911-24711739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
827-1012
               

               
Cow position:
               
chr20:33435093-33435267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
143, 54
               

               
Conread position:
               
832-1039
               

               
Cow position:
               
chr20:28832037-28831844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
136, 49
               

               
Conread position:
               
834-1010
               

               
Cow position:
               
chr20:3321068-3321238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 67
               

               
Conread position:
               
835-1009
               

               
Cow position:
               
chr20:40185608-40185777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 61
               

               
Conread position:
               
817-1010
               

               
Cow position:
               
chr21:15976735-15976556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
821-1029
               

               
Cow position:
               
chr21:1591652-1591456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
822-988
               

               
Cow position:
               
chr21:28244567-28244410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
145, 23
               

               
Conread position:
               
822-988
               

               
Cow position:
               
chr21:28919426-28919583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-993
               

               
Cow position:
               
chr21:10004788-10004950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr21:6017722-6017546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
159, 69
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr21:34151683-34151510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr21:3380981-3381157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
822-1007
               

               
Cow position:
               
chr21:1511390-1511218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
822-1007
               

               
Cow position:
               
chr21:40266222-40266048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr21:24642618-24642443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr21:41579853-41579676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
148, 69
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr21:15911500-15911323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr21:20153053-20152871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
148, 62
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr21:30606990-30607172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr21:36756697-36756522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr21:43357159-43357337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
822-1029
               

               
Cow position:
               
chr21:17193654-17193854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 34
               

               
Conread position:
               
822-1031
               

               
Cow position:
               
chr21:29978663-29978852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr21:23586979-23586777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr21:30231597-30231801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
825-980
               

               
Cow position:
               
chr21:7377832-7377980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
135, 56
               

               
Conread position:
               
825-996
               

               
Cow position:
               
chr21:47363640-47363806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr21:12461873-12462046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
145, 54
               

               
Conread position:
               
825-1011
               

               
Cow position:
               
chr21:9416344-9416169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
826-1006
               

               
Cow position:
               
chr21:713035-712856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
826-1010
               

               
Cow position:
               
chr21:27863420-27863592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
827-1012
               

               
Cow position:
               
chr21:45439144-45439327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
140, 56
               

               
Conread position:
               
828-1008
               

               
Cow position:
               
chr21:7564216-7564394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 54
               

               
Conread position:
               
828-1010
               

               
Cow position:
               
chr21:39450068-39450241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
829-1007
               

               
Cow position:
               
chr21:34727147-34727313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
829-1009
               

               
Cow position:
               
chr21:20925415-20925582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
141, 20
               

               
Conread position:
               
839-1029
               

               
Cow position:
               
chr21:42501124-42500942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
119, 42
               

               
Conread position:
               
883-1012
               

               
Cow position:
               
chr21:15445026-15445156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr22:32651536-32651355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
154, 21
               

               
Conread position:
               
816-1024
               

               
Cow position:
               
chr22:15668433-15668633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
817-1009
               

               
Cow position:
               
chr22:23833327-23833145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
153, 65
               

               
Conread position:
               
818-1010
               

               
Cow position:
               
chr22:17814267-17814081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
151, 58
               

               
Conread position:
               
818-1012
               

               
Cow position:
               
chr22:27819043-27818854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 63
               

               
Conread position:
               
819-992
               

               
Cow position:
               
chr22:28058017-28058183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
41, 63
               

               
Conread position:
               
821-1038
               

               
Cow position:
               
chr22:5467330-5467547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
132, 21
               

               
Conread position:
               
822-979
               

               
Cow position:
               
chr22:1265894-1266045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr22:5837300-5837150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr22:12389129-12388953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr22:27681747-27681578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1005
               

               
Cow position:
               
chr22:11130900-11130732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr22:27835565-27835391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr22:17125615-17125439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 45
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr22:32698794-32698618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr22:25221865-25222042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr22:31592822-31593002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr22:33448051-33448227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
147, 32
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr22:34712756-34712574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1032
               

               
Cow position:
               
chr22:9668606-9668401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr22:12968039-12968241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
822-1044
               

               
Cow position:
               
chr22:40120846-40121052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr22:1849101-1848921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
145, 54
               

               
Conread position:
               
825-1029
               

               
Cow position:
               
chr22:877542-877354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
825-1039
               

               
Cow position:
               
chr22:534526-534327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 56
               

               
Conread position:
               
826-1009
               

               
Cow position:
               
chr22:34475974-34476150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
830-1031
               

               
Cow position:
               
chr22:16044394-16044584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
140, 52
               

               
Conread position:
               
838-1010
               

               
Cow position:
               
chr22:11497215-11497050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
838-1026
               

               
Cow position:
               
chr22:4632019-4631834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
132, 41
               

               
Conread position:
               
841-1006
               

               
Cow position:
               
chr22:42684920-42684762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
815-1002
               

               
Cow position:
               
chr23:1670945-1670764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
155, 61
               

               
Conread position:
               
816-1029
               

               
Cow position:
               
chr23:4726839-4726630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
819-1010
               

               
Cow position:
               
chr23:37065888-37065703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
151, 62
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr23:27529048-27529217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
822-999
               

               
Cow position:
               
chr23:11129269-11129105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr23:3244878-3245054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
822-1005
               

               
Cow position:
               
chr23:6720245-6720423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr23:3191089-3191262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
165, 59
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr23:38455143-38455316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
152, 59
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr23:36309456-36309284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
147, 30
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr23:4528841-4529021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr23:5162469-5162288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
148, 69
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr23:18697990-18698166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr23:20557809-20557989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1014
               

               
Cow position:
               
chr23:33622114-33622294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1041
               

               
Cow position:
               
chr23:32479990-32480203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
825-1030
               

               
Cow position:
               
chr23:21336451-21336649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
145, 51
               

               
Conread position:
               
826-999
               

               
Cow position:
               
chr23:9713354-9713189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
128, 56
               

               
Conread position:
               
827-1006
               

               
Cow position:
               
chr23:14164367-14164535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 54
               

               
Conread position:
               
830-999
               

               
Cow position:
               
chr23:35239373-35239217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
140, 24
               

               
Conread position:
               
815-1010
               

               
Cow position:
               
chr24:6450517-6450332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr24:18313932-18314089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
148, 43
               

               
Conread position:
               
822-1002
               

               
Cow position:
               
chr24:20943177-20943011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
148, 57
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr24:18344072-18343891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 161
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr24:19185-19369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr24:7917352-7917529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr24:10125883-10125701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr24:16645311-16645493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
148, 68
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr24:19800856-19800682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr24:27290880-27290704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 53
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr24:30229482-30229307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr24:44987366-44987547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr24:30483939-30484117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
822-1014
               

               
Cow position:
               
chr24:43200261-43200444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
148, 81
               

               
Conread position:
               
822-1029
               

               
Cow position:
               
chr24:44040996-44041195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
826-1006
               

               
Cow position:
               
chr24:6102835-6102664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
831-1004
               

               
Cow position:
               
chr24:15861598-15861759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 50
               

               
Conread position:
               
832-1010
               

               
Cow position:
               
chr24:34315355-34315188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 49
               

               
Conread position:
               
833-1010
               

               
Cow position:
               
chr24:16625488-16625665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
136, 49
               

               
Conread position:
               
846-1005
               

               
Cow position:
               
chr24:29707809-29707963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 29
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr25:26654951-26654767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
822-973
               

               
Cow position:
               
chr25:40321256-40321406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
822-978
               

               
Cow position:
               
chr25:18201895-18202040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
148, 46
               

               
Conread position:
               
822-988
               

               
Cow position:
               
chr25:36779532-36779371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr25:6474056-6474236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr25:9957007-9957182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
148, 50
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr25:17658642-17658471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr25:36535402-36535579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
148, 68
               

               
Conread position:
               
822-1015
               

               
Cow position:
               
chr25:16064923-16064742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
825-1006
               

               
Cow position:
               
chr25:12840690-12840868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
145, 43
               

               
Conread position:
               
828-1010
               

               
Cow position:
               
chr25:12755462-12755634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
92, 53
               

               
Conread position:
               
838-1009
               

               
Cow position:
               
chr25:12824002-12824162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
838-1010
               

               
Cow position:
               
chr25:5515029-5514868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
819-1044
               

               
Cow position:
               
chr26:34256365-34256145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
822-1002
               

               
Cow position:
               
chr26:20260631-20260462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 17
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr26:4854595-4854414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr26:25526299-25526125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr26:19459743-19459556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
822-1029
               

               
Cow position:
               
chr26:32013683-32013486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
148, 69
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr26:15200463-15200668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr26:16550034-16549834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
826-1010
               

               
Cow position:
               
chr26:8186706-8186528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
144, 51
               

               
Conread position:
               
827-1010
               

               
Cow position:
               
chr26:10974176-10973989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 174
               

               
Conread position:
               
834-1010
               

               
Cow position:
               
chr26:9850059-9850224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
834-1010
               

               
Cow position:
               
chr26:9853569-9853734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
820-979
               

               
Cow position:
               
chr27:18491760-18491917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
821-988
               

               
Cow position:
               
chr27:4155918-4156080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-977
               

               
Cow position:
               
chr27:20514742-20514889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr27:15215153-15215304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
147, 37
               

               
Conread position:
               
822-998
               

               
Cow position:
               
chr27:31373060-31372891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1005
               

               
Cow position:
               
chr27:26919988-26919811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
102, 75
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr27:8263414-8263239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr27:715424-715599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 37
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr27:2592466-2592645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr27:7731334-7731152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr27:13875651-13875827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr27:23545406-23545224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr27:25379912-25380089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr27:27641089-27640899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
148, 88
               

               
Conread position:
               
822-1011
               

               
Cow position:
               
chr27:18558280-18558457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr27:23128383-23128558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 35
               

               
Conread position:
               
823-1021
               

               
Cow position:
               
chr27:22559903-22559714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr27:26218628-26218803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
144, 59
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr27:27270616-27270443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr27:30764957-30765134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
830-975
               

               
Cow position:
               
chr27:1558731-1558594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
830-1039
               

               
Cow position:
               
chr27:28931871-28931668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
836-1009
               

               
Cow position:
               
chr27:20552841-20552665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
858-1010
               

               
Cow position:
               
chr27:29399762-29399912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 126
               

               
Conread position:
               
816-996
               

               
Cow position:
               
chr28:10606583-10606755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
154, 38
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr28:13267840-13267651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
822-972
               

               
Cow position:
               
chr28:21355269-21355123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr28:3011231-3011382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr28:5166806-5166657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 57
               

               
Conread position:
               
822-1000
               

               
Cow position:
               
chr28:10615908-10616088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 104
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr28:3449341-3449169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr28:4307859-4308039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr28:21380919-21380745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr28:3143837-3144026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
137, 80
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr28:16252818-16252995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr28:18369969-18370155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
148, 32
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr28:26743664-26743484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
118, 59
               

               
Conread position:
               
825-980
               

               
Cow position:
               
chr28:28903628-28903777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
825-1039
               

               
Cow position:
               
chr28:16085360-16085162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
828-1001
               

               
Cow position:
               
chr28:9099968-9099810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
141, 53
               

               
Conread position:
               
839-1010
               

               
Cow position:
               
chr28:10053308-10053470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
131, 43
               

               
Conread position:
               
846-1010
               

               
Cow position:
               
chr28:22170695-22170852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
123, 37
               

               
Conread position:
               
904-1010
               

               
Cow position:
               
chr28:23840169-23840062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
816-1038
               

               
Cow position:
               
chr29:12025429-12025640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
821-993
               

               
Cow position:
               
chr29:38581012-38580848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
149, 56
               

               
Conread position:
               
821-1010
               

               
Cow position:
               
chr29:17301566-17301388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
822-992
               

               
Cow position:
               
chr29:34745627-34745789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
148, 29
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr29:18462511-18462696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 108
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr29:18878450-18878642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
36, 86
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr29:40096999-40096819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
822-1029
               

               
Cow position:
               
chr29:35292123-35291931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
823-1010
               

               
Cow position:
               
chr29:4520370-4520194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
826-1005
               

               
Cow position:
               
chr29:22068713-22068887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
144, 50
               

               
Conread position:
               
826-1006
               

               
Cow position:
               
chr29:4120881-4120706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
826-1010
               

               
Cow position:
               
chr29:9139449-9139268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
816-1006
               

               
Cow position:
               
chr3:48241636-48241457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr3:15192601-15192401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr3:65800607-65800432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
817-1009
               

               
Cow position:
               
chr3:18067153-18066973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
153, 24
               

               
Conread position:
               
819-1000
               

               
Cow position:
               
chr3:3032423-3032251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
7, 64
               

               
Conread position:
               
819-1010
               

               
Cow position:
               
chr3:66609829-66610006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 62
               

               
Conread position:
               
819-1041
               

               
Cow position:
               
chr3:80081801-80082018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
207, 85
               

               
Conread position:
               
820-1011
               

               
Cow position:
               
chr3:15859654-15859831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
820-1039
               

               
Cow position:
               
chr3:79207974-79208189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
821-1014
               

               
Cow position:
               
chr3:11711975-11711790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
821-1017
               

               
Cow position:
               
chr3:54434986-54434805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
822-999
               

               
Cow position:
               
chr3:67520157-67520332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr3:25945102-25944924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
148, 87
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr3:5097216-5097044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1007
               

               
Cow position:
               
chr3:2850885-2851055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr3:55970516-55970343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr3:2025207-2025021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr3:23444879-23445057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr3:39328409-39328231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr3:53046650-53046822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr3:55819767-55819584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
148, 74
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr3:59884060-59884236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr3:60597553-60597379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr3:68587032-68586858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr3:30180095-30179915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
822-1017
               

               
Cow position:
               
chr3:15051939-15052122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
822-1017
               

               
Cow position:
               
chr3:65969176-65968988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1018
               

               
Cow position:
               
chr3:13380266-13380463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
822-1029
               

               
Cow position:
               
chr3:71430195-71430389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1036
               

               
Cow position:
               
chr3:55085160-55085371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr3:46350682-46350473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
148, 12
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr3:53592680-53592887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
148, 53
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr3:55712449-55712239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 62
               

               
Conread position:
               
822-1044
               

               
Cow position:
               
chr3:53270839-53270632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
823-1010
               

               
Cow position:
               
chr3:77365282-77365462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
825-980
               

               
Cow position:
               
chr3:74939578-74939419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 81
               

               
Conread position:
               
825-1001
               

               
Cow position:
               
chr3:19793584-19793747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
116, 56
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr3:12711909-12712082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
825-1012
               

               
Cow position:
               
chr3:19792911-19792727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 55
               

               
Conread position:
               
826-978
               

               
Cow position:
               
chr3:22221333-22221184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
826-978
               

               
Cow position:
               
chr3:43727084-43726941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
826-1004
               

               
Cow position:
               
chr3:72019124-72018958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
144, 54
               

               
Conread position:
               
827-1010
               

               
Cow position:
               
chr3:33698735-33698562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
143, 52
               

               
Conread position:
               
828-980
               

               
Cow position:
               
chr3:74500246-74500100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
142, 52
               

               
Conread position:
               
829-1017
               

               
Cow position:
               
chr3:48578840-48578666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
141, 7
               

               
Conread position:
               
838-1010
               

               
Cow position:
               
chr3:63860896-63861060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
839-1004
               

               
Cow position:
               
chr3:61678697-61678532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
131, 65
               

               
Conread position:
               
849-1010
               

               
Cow position:
               
chr3:4087177-4087331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr4:39128576-39128386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
821-1004
               

               
Cow position:
               
chr4:65950682-65950507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
821-1010
               

               
Cow position:
               
chr4:23445019-23445200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
822-978
               

               
Cow position:
               
chr4:34700004-34700158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
148, 78
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr4:65432176-65432026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
822-1002
               

               
Cow position:
               
chr4:45589572-45589739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr4:34369424-34369594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr4:37313195-37313027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr4:21371417-21371243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr4:23509622-23509445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr4:34630924-34630747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr4:45775312-45775494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
116, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr4:48322059-48321877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr4:52748428-52748605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr4:60370800-60370976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
149, 59
               

               
Conread position:
               
822-1011
               

               
Cow position:
               
chr4:20124942-20125138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 128
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr4:31505998-31506181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
822-1017
               

               
Cow position:
               
chr4:44782400-44782219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
145, 12
               

               
Conread position:
               
822-1029
               

               
Cow position:
               
chr4:5460835-5461027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
825-980
               

               
Cow position:
               
chr4:37343150-37342994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 130
               

               
Conread position:
               
825-997
               

               
Cow position:
               
chr4:13284407-13284244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
120, 56
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr4:19322055-19322230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
106, 52
               

               
Conread position:
               
825-1016
               

               
Cow position:
               
chr4:55395786-55395607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
825-1017
               

               
Cow position:
               
chr4:12473874-12473690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
120, 55
               

               
Conread position:
               
825-1035
               

               
Cow position:
               
chr4:37732460-37732663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
825-1039
               

               
Cow position:
               
chr4:36893382-36893183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
826-1009
               

               
Cow position:
               
chr4:59785344-59785171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
826-1043
               

               
Cow position:
               
chr4:54767351-54767569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
827-980
               

               
Cow position:
               
chr4:14500223-14500375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
143, 100
               

               
Conread position:
               
827-1006
               

               
Cow position:
               
chr4:34165953-34166121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
827-1039
               

               
Cow position:
               
chr4:22138201-22138406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
116, 54
               

               
Conread position:
               
829-999
               

               
Cow position:
               
chr4:11897276-11897435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
830-1017
               

               
Cow position:
               
chr4:34383323-34383501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
833-1011
               

               
Cow position:
               
chr4:30929617-30929447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
834-1009
               

               
Cow position:
               
chr4:11901547-11901709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
133, 47
               

               
Conread position:
               
838-1010
               

               
Cow position:
               
chr4:48137922-48137763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
838-1010
               

               
Cow position:
               
chr4:61214985-61215149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
839-1006
               

               
Cow position:
               
chr4:45483453-45483293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
131, 42
               

               
Conread position:
               
841-1010
               

               
Cow position:
               
chr4:43369839-43370001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
841-1034
               

               
Cow position:
               
chr4:46370832-46370644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
129, 43
               

               
Conread position:
               
904-1009
               

               
Cow position:
               
chr4:67392914-67392812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
66, 79
               

               
Conread position:
               
811-1010
               

               
Cow position:
               
chr5:54404820-54405007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
159, 30
               

               
Conread position:
               
816-1009
               

               
Cow position:
               
chr5:34300984-34300803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
822-985
               

               
Cow position:
               
chr5:59873021-59873185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
822-988
               

               
Cow position:
               
chr5:57526865-57527015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
148, 34
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr5:4031930-4032104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr5:23678640-23678814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr5:28927526-28927703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr5:30487301-30487122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
92, 57
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr5:34050177-34049997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr5:37808604-37808790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr5:39937174-39936988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr5:43858360-43858546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 109
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr5:47870982-47871161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr5:26262615-26262788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr5:54350302-54350484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1029
               

               
Cow position:
               
chr5:2500120-2500321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1029
               

               
Cow position:
               
chr5:63987386-63987583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr5:52000282-52000081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
823-1012
               

               
Cow position:
               
chr5:55756362-55756547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
17, 21
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr5:14473348-14473531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 56
               

               
Conread position:
               
825-1012
               

               
Cow position:
               
chr5:53710633-53710810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
142, 55
               

               
Conread position:
               
826-1006
               

               
Cow position:
               
chr5:40356791-40356977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
54, 158
               

               
Conread position:
               
826-1010
               

               
Cow position:
               
chr5:18574230-18574056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
826-1010
               

               
Cow position:
               
chr5:21964344-21964171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 55
               

               
Conread position:
               
826-1010
               

               
Cow position:
               
chr5:29979927-29980097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
826-1010
               

               
Cow position:
               
chr5:42845538-42845720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
140, 56
               

               
Conread position:
               
826-1010
               

               
Cow position:
               
chr5:45225758-45225939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
826-1011
               

               
Cow position:
               
chr5:52165122-52165294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
826-1012
               

               
Cow position:
               
chr5:42064260-42064082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
141, 55
               

               
Conread position:
               
827-980
               

               
Cow position:
               
chr5:5257234-5257382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
67, 74
               

               
Conread position:
               
827-1009
               

               
Cow position:
               
chr5:16206102-16206268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
828-1010
               

               
Cow position:
               
chr5:18090791-18090609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
49, 158
               

               
Conread position:
               
829-1009
               

               
Cow position:
               
chr5:57561575-57561404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
831-1006
               

               
Cow position:
               
chr5:3771898-3771731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
136, 23
               

               
Conread position:
               
832-1012
               

               
Cow position:
               
chr5:53855749-53855578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
142, 50
               

               
Conread position:
               
835-1002
               

               
Cow position:
               
chr5:17063040-17063196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
135, 27
               

               
Conread position:
               
836-1015
               

               
Cow position:
               
chr5:16509145-16508976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
812-1010
               

               
Cow position:
               
chr6:36470480-36470668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
162, 13
               

               
Conread position:
               
813-980
               

               
Cow position:
               
chr6:4691893-4692054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
161, 69
               

               
Conread position:
               
816-1006
               

               
Cow position:
               
chr6:38614898-38614723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr6:54864575-54864771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
819-1006
               

               
Cow position:
               
chr6:34076106-34075922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
822-978
               

               
Cow position:
               
chr6:35103255-35103406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
26, 31
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr6:4468841-4468693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
148, 53
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr6:37395328-37395482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr6:16191751-16191575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr6:46558130-46557949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
822-1008
               

               
Cow position:
               
chr6:19292874-19292700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
152, 50
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr6:5095469-5095654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr6:12542857-12543033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr6:14914163-14914345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
28, 33
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr6:54867590-54867413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr6:58370831-58370653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr6:12338066-12337882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 61
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr6:15447125-15447331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr6:17313808-17313607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1044
               

               
Cow position:
               
chr6:61515115-61515329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
823-1012
               

               
Cow position:
               
chr6:38641569-38641392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
147, 67
               

               
Conread position:
               
824-1029
               

               
Cow position:
               
chr6:5445694-5445507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
146, 57
               

               
Conread position:
               
827-987
               

               
Cow position:
               
chr6:54364930-54365085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
143, 67
               

               
Conread position:
               
828-1010
               

               
Cow position:
               
chr6:38234026-38233858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
142, 53
               

               
Conread position:
               
829-1017
               

               
Cow position:
               
chr6:44984396-44984222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
141, 53
               

               
Conread position:
               
810-1009
               

               
Cow position:
               
chr7:15755359-15755546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
814-1010
               

               
Cow position:
               
chr7:19797845-19798037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
56, 68
               

               
Conread position:
               
816-1009
               

               
Cow position:
               
chr7:59688627-59688439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
154, 66
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr7:58862796-58862985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
821-1000
               

               
Cow position:
               
chr7:44986730-44986563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
821-1009
               

               
Cow position:
               
chr7:13963287-13963102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
149, 62
               

               
Conread position:
               
822-999
               

               
Cow position:
               
chr7:36774442-36774273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
148, 11
               

               
Conread position:
               
822-1003
               

               
Cow position:
               
chr7:9146722-9146549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
118, 11
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr7:9136913-9136740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr7:48638652-48638474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr7:36569937-36569753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 102
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr7:42222867-42223046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr7:48721824-48721999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr7:13593844-13593668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr7:19267295-19267467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
142, 17
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr7:41293671-41293846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr7:49783294-49783473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr7:57258948-57259125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr7:25722591-25722768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
145, 30
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr7:40008904-40008718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
822-1017
               

               
Cow position:
               
chr7:37697876-37697697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1029
               

               
Cow position:
               
chr7:20415213-20415420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
66, 163
               

               
Conread position:
               
822-1031
               

               
Cow position:
               
chr7:25195617-25195421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1031
               

               
Cow position:
               
chr7:58923473-58923278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1034
               

               
Cow position:
               
chr7:41327963-41328162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1035
               

               
Cow position:
               
chr7:51039507-51039302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 58
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr7:30931898-30932103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
145, 58
               

               
Conread position:
               
823-1010
               

               
Cow position:
               
chr7:11066557-11066377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
823-1010
               

               
Cow position:
               
chr7:23251488-23251660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
147, 58
               

               
Conread position:
               
825-1014
               

               
Cow position:
               
chr7:9193165-9193346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
143, 56
               

               
Conread position:
               
825-1015
               

               
Cow position:
               
chr7:47931724-47931904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
145, 57
               

               
Conread position:
               
826-1012
               

               
Cow position:
               
chr7:5212405-5212578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
127, 55
               

               
Conread position:
               
832-980
               

               
Cow position:
               
chr7:44094869-44095014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
138, 52
               

               
Conread position:
               
834-1004
               

               
Cow position:
               
chr7:27290463-27290624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
841-980
               

               
Cow position:
               
chr7:69133014-69132880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
129, 40
               

               
Conread position:
               
842-1010
               

               
Cow position:
               
chr7:44942510-44942355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
845-1044
               

               
Cow position:
               
chr7:35652020-35652209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
862-1010
               

               
Cow position:
               
chr7:25263414-25263273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
112, 19
               

               
Conread position:
               
902-1010
               

               
Cow position:
               
chr7:35779458-35779350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
814-1009
               

               
Cow position:
               
chr8:23585899-23586084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
155, 67
               

               
Conread position:
               
816-1004
               

               
Cow position:
               
chr8:41900587-41900764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
153, 11
               

               
Conread position:
               
816-1039
               

               
Cow position:
               
chr8:18207086-18207298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
154, 66
               

               
Conread position:
               
816-1039
               

               
Cow position:
               
chr8:59438230-59438436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
821-1010
               

               
Cow position:
               
chr8:30324368-30324186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr8:537869-538019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
147, 55
               

               
Conread position:
               
822-993
               

               
Cow position:
               
chr8:9517130-9517298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-998
               

               
Cow position:
               
chr8:20157716-20157886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-998
               

               
Cow position:
               
chr8:37347411-37347577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chr8:47664862-47665028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
148, 32
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr8:6753977-6753800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chr8:35504185-35504364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
83, 60
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr8:24471696-24471521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr8:24871826-24872003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 57
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr8:26008925-26008751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr8:40143808-40143983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr8:53429819-53429641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1029
               

               
Cow position:
               
chr8:23179497-23179691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
822-1036
               

               
Cow position:
               
chr8:17199388-17199588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr8:4552704-4552922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
88, 59
               

               
Conread position:
               
824-999
               

               
Cow position:
               
chr8:54031923-54031755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
146, 56
               

               
Conread position:
               
825-973
               

               
Cow position:
               
chr8:48437360-48437503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
826-1010
               

               
Cow position:
               
chr8:8668147-8668329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
51, 157
               

               
Conread position:
               
826-1039
               

               
Cow position:
               
chr8:6232856-6233054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
829-1010
               

               
Cow position:
               
chr8:3704660-3704490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 62
               

               
Conread position:
               
829-1010
               

               
Cow position:
               
chr8:28412576-28412749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
832-1017
               

               
Cow position:
               
chr8:5450568-5450745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
838-998
               

               
Cow position:
               
chr8:40276759-40276915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
69, 91
               

               
Conread position:
               
840-1029
               

               
Cow position:
               
chr8:37148148-37147972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
130, 41
               

               
Conread position:
               
816-1039
               

               
Cow position:
               
chr9:26086043-26086259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 83
               

               
Conread position:
               
817-1009
               

               
Cow position:
               
chr9:51566504-51566314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
817-1010
               

               
Cow position:
               
chr9:50139276-50139454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
821-980
               

               
Cow position:
               
chr9:50543431-50543279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chr9:6839989-6840145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-988
               

               
Cow position:
               
chr9:44822328-44822161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 107
               

               
Conread position:
               
822-1003
               

               
Cow position:
               
chr9:30402429-30402258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
822-1005
               

               
Cow position:
               
chr9:42445987-42445815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr9:1952274-1952104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
822-1006
               

               
Cow position:
               
chr9:55084306-55084132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr9:5433628-5433807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr9:8534694-8534516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chr9:38343883-38344059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1011
               

               
Cow position:
               
chr9:11123489-11123308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1011
               

               
Cow position:
               
chr9:29185141-29184963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
148, 70
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chr9:35105794-35105610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chr9:5531938-5532145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr9:8919989-8920167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr9:8998348-8998525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
145, 58
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chr9:15215688-15215513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
84, 56
               

               
Conread position:
               
825-1029
               

               
Cow position:
               
chr9:47906282-47906093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
826-1010
               

               
Cow position:
               
chr9:47446028-47445858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
826-1011
               

               
Cow position:
               
chr9:64050561-64050386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
143, 46
               

               
Conread position:
               
827-1009
               

               
Cow position:
               
chr9:62724534-62724710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
143, 55
               

               
Conread position:
               
830-1029
               

               
Cow position:
               
chr9:10092390-10092199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
831-1010
               

               
Cow position:
               
chr9:29091797-29091969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
139, 52
               

               
Conread position:
               
831-1011
               

               
Cow position:
               
chr9:7409771-7409952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
835-1010
               

               
Cow position:
               
chr9:33681683-33681853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
839-1010
               

               
Cow position:
               
chr9:20738709-20738875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
131, 41
               

               
Conread position:
               
904-1042
               

               
Cow position:
               
chr9:51720836-51720701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
66, 78
               

               
Conread position:
               
816-999
               

               
Cow position:
               
chrX:16348498-16348672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
154, 65
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chrX:36961707-36961526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
158, 61
               

               
Conread position:
               
816-1029
               

               
Cow position:
               
chrX:8797322-8797120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
154, 65
               

               
Conread position:
               
821-1009
               

               
Cow position:
               
chrX:9416623-9416805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
822-979
               

               
Cow position:
               
chrX:29549485-29549634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-980
               

               
Cow position:
               
chrX:42855518-42855367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
822-981
               

               
Cow position:
               
chrX:27261251-27261099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 59
               

               
Conread position:
               
822-991
               

               
Cow position:
               
chrX:22466015-22465843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
822-998
               

               
Cow position:
               
chrX:21327973-21327802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
822-1004
               

               
Cow position:
               
chrX:14599597-14599426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
83, 61
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chrX:34222776-34222598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
152, 56
               

               
Conread position:
               
822-1009
               

               
Cow position:
               
chrX:46587882-46587705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chrX:11717723-11717897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chrX:16762831-16762653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chrX:27228186-27228010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
148, 57
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chrX:37955907-37955720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
55, 126
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chrX:41027219-41027044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
822-1010
               

               
Cow position:
               
chrX:42247122-42247298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
822-1011
               

               
Cow position:
               
chrX:5872377-5872203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
152, 59
               

               
Conread position:
               
822-1012
               

               
Cow position:
               
chrX:10831430-10831608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1017
               

               
Cow position:
               
chrX:6234389-6234573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
822-1029
               

               
Cow position:
               
chrX:11856490-11856297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1031
               

               
Cow position:
               
chrX:20151920-20151713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
822-1031
               

               
Cow position:
               
chrX:30133258-30133458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1036
               

               
Cow position:
               
chrX:24365761-24365963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
822-1039
               

               
Cow position:
               
chrX:12405321-12405527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
822-1040
               

               
Cow position:
               
chrX:26625611-26625812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
825-980
               

               
Cow position:
               
chrX:20168615-20168470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
145, 52
               

               
Conread position:
               
825-1010
               

               
Cow position:
               
chrX:46532438-46532619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
145, 58
               

               
Conread position:
               
825-1018
               

               
Cow position:
               
chrX:29601771-29601951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
826-983
               

               
Cow position:
               
chrX:40680670-40680520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
827-1002
               

               
Cow position:
               
chrX:28845888-28845725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
828-1039
               

               
Cow position:
               
chrX:23563737-23563933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
142, 53
               

               
Conread position:
               
838-1011
               

               
Cow position:
               
chrX:35848608-35848447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
132, 27
               

               
Conread position:
               
839-1010
               

               
Cow position:
               
chrX:17498128-17497972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
131, 42
               

               
Conread position:
               
842-1011
               

               
Cow position:
               
chrX:12116087-12115925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
128, 42
               

               
Conread position:
               
846-1012
               

               
Cow position:
               
chrX:26286017-26285864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
37, 0