Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8064J05.5 |
| Conread position: | 665-836 |
| Cow position: | chr1:28645488-28645659 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-293 |
| Cow position: | chr10:13740141-13740412 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-337 |
| Cow position: | chr10:13721447-13721131 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 0 |
| Conread position: | 331-536 |
| Cow position: | chr10:13740760-13740965 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 331-545 |
| Cow position: | chr10:13720912-13720698 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 529-663 |
| Cow position: | chr10:13720593-13720459 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 663-938 |
| Cow position: | chr10:13720368-13720093 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 663-938 |
| Cow position: | chr10:13742312-13742587 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1035-1171 |
| Cow position: | chr10:13718989-13718853 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1035-1171 |
| Cow position: | chr10:13744438-13744574 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 144-536 |
| Cow position: | chr13:46548536-46548144 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 252 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 166, 151 |
| Conread position: | 663-840 |
| Cow position: | chr13:46547854-46547676 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 19-333 |
| Cow position: | chr19:22705181-22704867 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-333 |
| Cow position: | chr19:2416942-2416631 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-333 |
| Cow position: | chr19:2443358-2443047 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-333 |
| Cow position: | chr19:22474114-22473803 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-333 |
| Cow position: | chr19:22522100-22521789 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 323-536 |
| Cow position: | chr19:22521162-22520948 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 331-536 |
| Cow position: | chr19:2416547-2416342 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 331-536 |
| Cow position: | chr19:2442963-2442758 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 331-536 |
| Cow position: | chr19:22473168-22472963 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 331-536 |
| Cow position: | chr19:22704753-22704548 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 518-661 |
| Cow position: | chr19:22704492-22704349 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 533-663 |
| Cow position: | chr19:2416016-2415886 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 534-663 |
| Cow position: | chr19:2442226-2442097 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 534-663 |
| Cow position: | chr19:22471801-22471672 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 121 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 534-663 |
| Cow position: | chr19:22519699-22519570 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 663-835 |
| Cow position: | chr19:2415797-2415625 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 663-835 |
| Cow position: | chr19:2442008-2441836 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 663-835 |
| Cow position: | chr19:22471587-22471415 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 663-835 |
| Cow position: | chr19:22519481-22519309 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 663-840 |
| Cow position: | chr19:22703524-22703347 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 834-938 |
| Cow position: | chr19:22471201-22471097 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 834-947 |
| Cow position: | chr19:2415360-2415248 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 890-1035 |
| Cow position: | chr19:22519282-22519137 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 80 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 928-1035 |
| Cow position: | chr19:2441541-2441434 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 932-1035 |
| Cow position: | chr19:22470583-22470480 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 936-1033 |
| Cow position: | chr19:2415139-2415042 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1035-1156 |
| Cow position: | chr19:22702805-22702684 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 44 |
| Conread position: | 1035-1247 |
| Cow position: | chr19:22517853-22517641 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 148 |
| Conread position: | 1035-1248 |
| Cow position: | chr19:2440161-2439947 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 160 |
| Conread position: | 1035-1255 |
| Cow position: | chr19:2413075-2412854 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 148 |
| Conread position: | 1035-1308 |
| Cow position: | chr19:22469162-22468888 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 0 |