Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8067M11.3 |
| Conread position: | 647-1326 |
| Cow position: | chr17:18742107-18742755 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 30 |
| Conread position: | 1834-2204 |
| Cow position: | chr2:60923579-60923195 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 278 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 19, 220 |
| Conread position: | 1-397 |
| Cow position: | chr25:5006930-5007331 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 157 |
| Conread position: | 416-613 |
| Cow position: | chr25:5009805-5010003 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 602-761 |
| Cow position: | chr25:5010232-5010391 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 757-953 |
| Cow position: | chr25:5010985-5011181 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 952-1055 |
| Cow position: | chr25:5011367-5011470 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1050-1209 |
| Cow position: | chr25:5011748-5011907 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 142 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1207-1352 |
| Cow position: | chr25:5014374-5014519 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 137 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1349-1481 |
| Cow position: | chr25:5015037-5015167 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1587-1742 |
| Cow position: | chr25:5015332-5015486 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 1773-2190 |
| Cow position: | chr25:5015484-5015911 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 402-774 |
| Cow position: | chr29:12867093-12867461 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 800-1565 |
| Cow position: | chr29:12867434-12868189 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 579 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 429, 20 |
| Conread position: | 1587-1878 |
| Cow position: | chr29:12868289-12868573 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 117 |
| Conread position: | 2045-2207 |
| Cow position: | chr29:12871180-12871343 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 143 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 1990-2198 |
| Cow position: | chr4:49990504-49990296 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 36 |
| Conread position: | 396-696 |
| Cow position: | chr5:10926701-10927000 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1075-1273 |
| Cow position: | chr5:10928862-10929059 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 66, 152 |
| Conread position: | 1366-1694 |
| Cow position: | chr5:10929129-10929458 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 52, 179 |
| Conread position: | 1880-2213 |
| Cow position: | chr5:10929455-10929794 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 1070-1209 |
| Cow position: | chr6:11102734-11102873 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 123 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 604-1447 |
| Cow position: | chr7:4123958-4124777 (view UCSC Genome Browser custom track) |
| Alignm length: | 851 |
| Alignm identity: | 659 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 346 |
| Conread position: | 606-849 |
| Cow position: | chr7:11577544-11577301 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 188, 225 |
| Conread position: | 606-1082 |
| Cow position: | chr7:14426853-14426409 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 749-1447 |
| Cow position: | chr7:14426736-14426030 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 19 |
| Conread position: | 793-1447 |
| Cow position: | chr7:11577399-11576757 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 131 |
| Conread position: | 1558-1783 |
| Cow position: | chr7:11576696-11576465 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 30, 84 |
| Conread position: | 1590-1904 |
| Cow position: | chr7:4124868-4125157 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 146, 19 |
| Conread position: | 1989-2155 |
| Cow position: | chr7:14425536-14425376 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 163, 18 |
| Conread position: | 2013-2154 |
| Cow position: | chr7:11576195-11576058 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 2030-2197 |
| Cow position: | chr7:4125259-4125419 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 6, 14 |