Cow genome map
| Conread name: | Ss1.1-Pla1-C0000940_P10.5 |
| Conread position: | 3-599 |
| Cow position: | chr13:44193956-44193370 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 29 |
| Conread position: | 58-267 |
| Cow position: | chr13:44195827-44195607 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 51, 176 |
| Conread position: | 100-508 |
| Cow position: | chr13:44195169-44194739 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 306 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 15, 83 |
| Conread position: | 114-530 |
| Cow position: | chr13:44194519-44194067 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 67 |
| Conread position: | 355-604 |
| Cow position: | chr13:44195556-44195295 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 33, 13 |
| Conread position: | 3-165 |
| Cow position: | chr15:4865092-4865250 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 99, 29 |
| Conread position: | 86-464 |
| Cow position: | chr15:4864535-4864937 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 276 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 20, 98 |
| Conread position: | 113-508 |
| Cow position: | chr15:4863920-4864329 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 68 |
| Conread position: | 169-597 |
| Cow position: | chr15:4866186-4866614 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 46 |
| Conread position: | 1-141 |
| Cow position: | chr17:23841350-23841209 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 96, 30 |
| Conread position: | 104-496 |
| Cow position: | chr17:23841931-23841522 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 111, 59 |
| Conread position: | 467-621 |
| Cow position: | chr2:1337969-1337812 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 73, 144 |
| Conread position: | 16-274 |
| Cow position: | chr21:16584101-16584373 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 84, 14 |
| Conread position: | 195-609 |
| Cow position: | chr21:16586341-16586768 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 96 |
| Conread position: | 353-573 |
| Cow position: | chr21:16584412-16584647 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-163 |
| Cow position: | chr23:1313931-1314095 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 95, 54 |
| Conread position: | 61-622 |
| Cow position: | chr23:1312710-1313295 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 15 |
| Conread position: | 169-437 |
| Cow position: | chr23:1314133-1314396 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 43 |
| Conread position: | 444-624 |
| Cow position: | chr23:1314932-1315115 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 444-599 |
| Cow position: | chr24:44504525-44504362 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 3-495 |
| Cow position: | chr28:7563261-7562757 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 29 |
| Conread position: | 27-274 |
| Cow position: | chr28:7787205-7786964 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 127, 71 |
| Conread position: | 34-365 |
| Cow position: | chr28:7786603-7786274 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 488-599 |
| Cow position: | chr28:7562484-7562369 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 187-599 |
| Cow position: | chr4:65214733-65214317 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 36-332 |
| Cow position: | chr5:50610767-50611073 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 8-130 |
| Cow position: | chr6:13100412-13100288 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 119-621 |
| Cow position: | chr6:13100007-13099498 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 96 |