Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Spl1-SPL01F070075.5
        

               Conread position:
               66-357
               

               Cow position:
               chr10:61296692-61296382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               34, 16
               

               Conread position:
               99-854
               

               Cow position:
               chr10:54126835-54126075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               790
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               109-905
               

               Cow position:
               chr10:29069029-29068234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               825
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 128
               

               Conread position:
               159-601
               

               Cow position:
               chr10:42657318-42656864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 80
               

               Conread position:
               159-678
               

               Cow position:
               chr10:14950294-14949752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               550
               

               Alignm identity:
               351
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               29, 48
               

               Conread position:
               166-928
               

               Cow position:
               chr10:49309029-49308240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               806
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 22
               

               Conread position:
               239-909
               

               Cow position:
               chr10:26596761-26596100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               690
               

               Alignm identity:
               429
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               132, 95
               

               Conread position:
               239-913
               

               Cow position:
               chr10:60488814-60488156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               691
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 30
               

               Conread position:
               242-936
               

               Cow position:
               chr10:15863555-15864281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               741
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 222
               

               Conread position:
               243-936
               

               Cow position:
               chr10:53322110-53322825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               726
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 226
               

               Conread position:
               298-876
               

               Cow position:
               chr10:8328636-8329220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               603
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 31
               

               Conread position:
               415-936
               

               Cow position:
               chr10:10415008-10414472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               548
               

               Alignm identity:
               358
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               74, 123
               

               Conread position:
               430-926
               

               Cow position:
               chr10:42735558-42735048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               527
               

               Alignm identity:
               340
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               48, 116
               

               Conread position:
               464-910
               

               Cow position:
               chr10:61296311-61295849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               305
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               496-882
               

               Cow position:
               chr10:1938789-1939192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               21, 245
               

               Conread position:
               512-927
               

               Cow position:
               chr10:34684920-34684486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 92
               

               Conread position:
               554-928
               

               Cow position:
               chr10:44516670-44517066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               64, 54
               

               Conread position:
               634-928
               

               Cow position:
               chr10:34319001-34319311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               675-927
               

               Cow position:
               chr10:46189596-46189344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               38, 51
               

               Conread position:
               675-936
               

               Cow position:
               chr10:24300811-24301073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               125, 51
               

               Conread position:
               713-916
               

               Cow position:
               chr10:20383257-20383456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               162, 9
               

               Conread position:
               58-628
               

               Cow position:
               chr11:7686348-7685753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               607
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 34
               

               Conread position:
               64-865
               

               Cow position:
               chr11:7112486-7111696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               832
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               148-928
               

               Cow position:
               chr11:18106337-18107131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               823
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 141
               

               Conread position:
               159-593
               

               Cow position:
               chr11:26467106-26466663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               296
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               47, 252
               

               Conread position:
               227-628
               

               Cow position:
               chr11:11123469-11123059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 11
               

               Conread position:
               241-936
               

               Cow position:
               chr11:25392914-25392190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               740
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 158
               

               Conread position:
               364-919
               

               Cow position:
               chr11:27282679-27282098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               591
               

               Alignm identity:
               362
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               48, 158
               

               Conread position:
               391-906
               

               Cow position:
               chr11:84921421-84920892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               542
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 159
               

               Conread position:
               411-936
               

               Cow position:
               chr11:44506184-44505647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               553
               

               Alignm identity:
               362
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               82, 14
               

               Conread position:
               495-788
               

               Cow position:
               chr11:13057515-13057824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               566-936
               

               Cow position:
               chr11:24676618-24676237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               66, 37
               

               Conread position:
               634-936
               

               Cow position:
               chr11:4070596-4070302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 112
               

               Conread position:
               635-936
               

               Cow position:
               chr11:7684981-7684675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               44, 21
               

               Conread position:
               678-908
               

               Cow position:
               chr11:37493088-37493320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               35, 86
               

               Conread position:
               710-936
               

               Cow position:
               chr11:56178911-56178693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               725-934
               

               Cow position:
               chr11:8249635-8249848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               165-628
               

               Cow position:
               chr12:22472998-22472520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               322
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               72, 279
               

               Conread position:
               417-935
               

               Cow position:
               chr12:8310086-8309545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               548
               

               Alignm identity:
               336
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               66, 196
               

               Conread position:
               430-755
               

               Cow position:
               chr12:22120704-22120370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 23
               

               Conread position:
               496-916
               

               Cow position:
               chr12:15956544-15956983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               300
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               13, 79
               

               Conread position:
               64-357
               

               Cow position:
               chr13:20543245-20543535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               114-936
               

               Cow position:
               chr13:34768735-34769605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               885
               

               Alignm identity:
               595
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 38
               

               Conread position:
               129-918
               

               Cow position:
               chr13:33280154-33280970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               835
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               160-847
               

               Cow position:
               chr13:5282330-5281642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               712
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 23
               

               Conread position:
               364-600
               

               Cow position:
               chr13:41606217-41605971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               48, 102
               

               Conread position:
               438-672
               

               Cow position:
               chr13:49193802-49194047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 108
               

               Conread position:
               498-916
               

               Cow position:
               chr13:20580332-20580758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               282
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               16, 41
               

               Conread position:
               517-846
               

               Cow position:
               chr13:32165261-32164925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               5, 11
               

               Conread position:
               567-916
               

               Cow position:
               chr13:60649929-60649568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               66, 147
               

               Conread position:
               186-936
               

               Cow position:
               chr14:37414593-37415382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               799
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 8
               

               Conread position:
               241-936
               

               Cow position:
               chr14:33401538-33400811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               734
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 310
               

               Conread position:
               357-919
               

               Cow position:
               chr14:44262214-44262803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               598
               

               Alignm identity:
               375
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               55, 116
               

               Conread position:
               364-936
               

               Cow position:
               chr14:36184978-36185562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               606
               

               Alignm identity:
               395
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               48, 66
               

               Conread position:
               415-918
               

               Cow position:
               chr14:35085200-35085703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               525
               

               Alignm identity:
               337
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               81, 11
               

               Conread position:
               429-913
               

               Cow position:
               chr14:42403575-42403067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               513
               

               Alignm identity:
               327
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               54, 91
               

               Conread position:
               502-936
               

               Cow position:
               chr14:40338254-40337807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               555-921
               

               Cow position:
               chr14:45190588-45190966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               78, 54
               

               Conread position:
               634-936
               

               Cow position:
               chr14:8977151-8977447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               43, 151
               

               Conread position:
               680-919
               

               Cow position:
               chr14:18415751-18415506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               18, 84
               

               Conread position:
               27-771
               

               Cow position:
               chr15:36628166-36628893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               775
               

               Alignm identity:
               499
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               27, 102
               

               Conread position:
               66-318
               

               Cow position:
               chr15:16591120-16591388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               99-848
               

               Cow position:
               chr15:53298405-53297669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               774
               

               Alignm identity:
               483
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               109, 134
               

               Conread position:
               157-594
               

               Cow position:
               chr15:4631406-4631857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               292
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               42, 184
               

               Conread position:
               157-742
               

               Cow position:
               chr15:8698849-8699455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               622
               

               Alignm identity:
               403
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               43, 57
               

               Conread position:
               225-567
               

               Cow position:
               chr15:12613558-12613193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               23, 275
               

               Conread position:
               246-593
               

               Cow position:
               chr15:40103882-40103527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               99, 16
               

               Conread position:
               271-810
               

               Cow position:
               chr15:27066037-27066577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               572
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 69
               

               Conread position:
               502-935
               

               Cow position:
               chr15:7895576-7896024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               280
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               11, 240
               

               Conread position:
               512-916
               

               Cow position:
               chr15:35649653-35650071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 26
               

               Conread position:
               530-912
               

               Cow position:
               chr15:21817987-21818384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               103, 9
               

               Conread position:
               542-935
               

               Cow position:
               chr15:21447064-21446649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               91, 50
               

               Conread position:
               566-936
               

               Cow position:
               chr15:23264364-23263983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               67, 31
               

               Conread position:
               578-918
               

               Cow position:
               chr15:51798197-51797833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 31
               

               Conread position:
               581-920
               

               Cow position:
               chr15:4632643-4632991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               51, 82
               

               Conread position:
               675-926
               

               Cow position:
               chr15:683636-683377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 51
               

               Conread position:
               678-921
               

               Cow position:
               chr15:40061691-40061446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               722-919
               

               Cow position:
               chr15:319493-319292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               733-936
               

               Cow position:
               chr15:48411521-48411724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               104, 67
               

               Conread position:
               63-916
               

               Cow position:
               chr16:28234019-28234845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               887
               

               Alignm identity:
               580
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               70-928
               

               Cow position:
               chr16:49956510-49957372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               899
               

               Alignm identity:
               606
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 29
               

               Conread position:
               138-462
               

               Cow position:
               chr16:29981190-29980845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               157-919
               

               Cow position:
               chr16:15804262-15803481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               798
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 173
               

               Conread position:
               157-928
               

               Cow position:
               chr16:47780169-47779371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               808
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 183
               

               Conread position:
               240-864
               

               Cow position:
               chr16:27715530-27716180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               663
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 18
               

               Conread position:
               261-936
               

               Cow position:
               chr16:25257018-25256346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               698
               

               Alignm identity:
               428
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               69, 102
               

               Conread position:
               362-919
               

               Cow position:
               chr16:13651105-13651680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               585
               

               Alignm identity:
               358
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               48, 104
               

               Conread position:
               377-744
               

               Cow position:
               chr16:25152015-25151625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 104
               

               Conread position:
               435-910
               

               Cow position:
               chr16:42052025-42052500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               326
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               68, 26
               

               Conread position:
               448-708
               

               Cow position:
               chr16:9928228-9927950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               45, 101
               

               Conread position:
               496-935
               

               Cow position:
               chr16:32934100-32933643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               500-936
               

               Cow position:
               chr16:5886971-5886525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               511-840
               

               Cow position:
               chr16:31718150-31718475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               116, 31
               

               Conread position:
               514-916
               

               Cow position:
               chr16:28876502-28876091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               275
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               118, 24
               

               Conread position:
               530-917
               

               Cow position:
               chr16:20433563-20433156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               102, 72
               

               Conread position:
               545-936
               

               Cow position:
               chr16:40936507-40936124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               275
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               78, 74
               

               Conread position:
               566-927
               

               Cow position:
               chr16:42107073-42106700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               256
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               46, 35
               

               Conread position:
               644-913
               

               Cow position:
               chr16:334017-333743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               678-905
               

               Cow position:
               chr16:42741787-42742011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               94, 44
               

               Conread position:
               754-917
               

               Cow position:
               chr16:36234398-36234558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               134, 11
               

               Conread position:
               159-936
               

               Cow position:
               chr17:20400165-20399386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               808
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 87
               

               Conread position:
               188-928
               

               Cow position:
               chr17:3282895-3282116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               798
               

               Alignm identity:
               503
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               12, 258
               

               Conread position:
               230-936
               

               Cow position:
               chr17:4080147-4079429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               746
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 11
               

               Conread position:
               241-838
               

               Cow position:
               chr17:24607555-24606959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               618
               

               Alignm identity:
               385
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               362, 86
               

               Conread position:
               267-864
               

               Cow position:
               chr17:2587179-2586551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               636
               

               Alignm identity:
               388
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               96, 61
               

               Conread position:
               304-910
               

               Cow position:
               chr17:155877-156499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               638
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 42
               

               Conread position:
               364-744
               

               Cow position:
               chr17:27663780-27663388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 101
               

               Conread position:
               370-928
               

               Cow position:
               chr17:31201751-31202336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               591
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 60
               

               Conread position:
               377-936
               

               Cow position:
               chr17:38616776-38616193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               591
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 53
               

               Conread position:
               519-908
               

               Cow position:
               chr17:15369864-15369467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               276
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               89, 20
               

               Conread position:
               535-910
               

               Cow position:
               chr17:3695045-3695446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               554-841
               

               Cow position:
               chr17:42262541-42262238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               78, 185
               

               Conread position:
               634-934
               

               Cow position:
               chr17:18303675-18303985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               47, 141
               

               Conread position:
               74-879
               

               Cow position:
               chr18:43199667-43198865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               840
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 9
               

               Conread position:
               209-681
               

               Cow position:
               chr18:3099873-3100367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               326
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               495-936
               

               Cow position:
               chr18:48546912-48546458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               303
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 45
               

               Conread position:
               512-935
               

               Cow position:
               chr18:53784552-53784109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               288
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               25, 98
               

               Conread position:
               582-917
               

               Cow position:
               chr18:51629262-51628929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               634-921
               

               Cow position:
               chr18:45936154-45935858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               49, 100
               

               Conread position:
               675-921
               

               Cow position:
               chr18:11368778-11369031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               34, 51
               

               Conread position:
               83-919
               

               Cow position:
               chr19:42650209-42651032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               865
               

               Alignm identity:
               597
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 118
               

               Conread position:
               167-936
               

               Cow position:
               chr19:6552000-6551184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               827
               

               Alignm identity:
               548
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 256
               

               Conread position:
               172-628
               

               Cow position:
               chr19:8230523-8231002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               333
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               24, 106
               

               Conread position:
               229-572
               

               Cow position:
               chr19:563223-563575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               53, 12
               

               Conread position:
               364-804
               

               Cow position:
               chr19:36476223-36475760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               308
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               48, 189
               

               Conread position:
               492-936
               

               Cow position:
               chr19:30926532-30926073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               304
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               23, 51
               

               Conread position:
               495-919
               

               Cow position:
               chr19:33652788-33652346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               21, 46
               

               Conread position:
               58-936
               

               Cow position:
               chr2:85069976-85070853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               919
               

               Alignm identity:
               605
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 26
               

               Conread position:
               64-358
               

               Cow position:
               chr2:5486081-5486366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               120-927
               

               Cow position:
               chr2:32460505-32461363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               868
               

               Alignm identity:
               561
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 78
               

               Conread position:
               158-872
               

               Cow position:
               chr2:42334952-42335688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               760
               

               Alignm identity:
               477
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 323
               

               Conread position:
               184-936
               

               Cow position:
               chr2:36360003-36359225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               795
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               364-587
               

               Cow position:
               chr2:75677242-75677474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               43, 182
               

               Conread position:
               390-656
               

               Cow position:
               chr2:32501081-32501361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               27, 162
               

               Conread position:
               391-936
               

               Cow position:
               chr2:11728744-11728179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 160
               

               Conread position:
               414-936
               

               Cow position:
               chr2:36563043-36562494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               554
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 12
               

               Conread position:
               418-881
               

               Cow position:
               chr2:31707168-31707642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 127
               

               Conread position:
               433-907
               

               Cow position:
               chr2:52629722-52630211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               331
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               59, 113
               

               Conread position:
               495-889
               

               Cow position:
               chr2:769988-770383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               268
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               495-918
               

               Cow position:
               chr2:32435672-32436107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               496-935
               

               Cow position:
               chr2:1491892-1492337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               41, 178
               

               Conread position:
               503-910
               

               Cow position:
               chr2:7900497-7900074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               529-875
               

               Cow position:
               chr2:54650934-54651298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               7, 51
               

               Conread position:
               689-917
               

               Cow position:
               chr2:24394890-24395118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               24, 5
               

               Conread position:
               737-905
               

               Cow position:
               chr2:32501650-32501823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               64-478
               

               Cow position:
               chr20:20249864-20250278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 22
               

               Conread position:
               83-366
               

               Cow position:
               chr20:10846932-10847206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               44, 17
               

               Conread position:
               239-878
               

               Cow position:
               chr20:9521667-9522314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               664
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 51
               

               Conread position:
               240-928
               

               Cow position:
               chr20:5573364-5572654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               727
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 83
               

               Conread position:
               433-910
               

               Cow position:
               chr20:10103507-10103989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               326
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               60, 111
               

               Conread position:
               496-936
               

               Cow position:
               chr20:20250330-20250788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 46
               

               Conread position:
               634-910
               

               Cow position:
               chr20:28592095-28591809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               48, 100
               

               Conread position:
               63-806
               

               Cow position:
               chr21:28873947-28873165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               803
               

               Alignm identity:
               518
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               65, 20
               

               Conread position:
               142-916
               

               Cow position:
               chr21:3983661-3982876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               818
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 153
               

               Conread position:
               364-936
               

               Cow position:
               chr21:33753995-33753421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               594
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 175
               

               Conread position:
               424-916
               

               Cow position:
               chr21:358002-357519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               337
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               495-919
               

               Cow position:
               chr21:15274143-15273704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               283
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               17, 58
               

               Conread position:
               498-916
               

               Cow position:
               chr21:23808760-23808325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               281
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               16, 41
               

               Conread position:
               732-936
               

               Cow position:
               chr21:38279732-38279938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               38, 80
               

               Conread position:
               100-327
               

               Cow position:
               chr22:44608938-44608716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               163-809
               

               Cow position:
               chr22:34695746-34695083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               679
               

               Alignm identity:
               431
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               45, 25
               

               Conread position:
               426-834
               

               Cow position:
               chr22:33350122-33349691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               50, 36
               

               Conread position:
               488-916
               

               Cow position:
               chr22:9464400-9463963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               8, 53
               

               Conread position:
               508-872
               

               Cow position:
               chr22:1294625-1294996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               38, 109
               

               Conread position:
               512-871
               

               Cow position:
               chr22:32488662-32489037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 319
               

               Conread position:
               581-928
               

               Cow position:
               chr22:37735693-37735329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               250
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               52, 247
               

               Conread position:
               46-628
               

               Cow position:
               chr23:22880371-22880986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               625
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 53
               

               Conread position:
               258-889
               

               Cow position:
               chr23:16617918-16618556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               658
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 55
               

               Conread position:
               290-936
               

               Cow position:
               chr23:16054911-16054227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               698
               

               Alignm identity:
               454
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               43, 156
               

               Conread position:
               504-913
               

               Cow position:
               chr23:1026146-1026566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               282
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               513-935
               

               Cow position:
               chr23:29474719-29475153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               634-935
               

               Cow position:
               chr23:22881400-22881708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               32, 100
               

               Conread position:
               57-918
               

               Cow position:
               chr24:12289945-12290821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               903
               

               Alignm identity:
               623
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 29
               

               Conread position:
               66-917
               

               Cow position:
               chr24:35992048-35992893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               881
               

               Alignm identity:
               601
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               496-936
               

               Cow position:
               chr24:6334723-6334278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               289
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               60, 217
               

               Conread position:
               435-879
               

               Cow position:
               chr25:18091635-18091172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               314
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               57, 114
               

               Conread position:
               496-935
               

               Cow position:
               chr25:18061575-18062024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               498-881
               

               Cow position:
               chr25:12836502-12836904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 37
               

               Conread position:
               556-916
               

               Cow position:
               chr25:33256996-33256621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               66, 41
               

               Conread position:
               633-912
               

               Cow position:
               chr25:26928095-26927803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 169
               

               Conread position:
               751-936
               

               Cow position:
               chr25:27537029-27537215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               151
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               96-355
               

               Cow position:
               chr26:9859609-9859874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               240-615
               

               Cow position:
               chr26:21350176-21349804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 39
               

               Conread position:
               242-936
               

               Cow position:
               chr26:12663592-12662866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               733
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 91
               

               Conread position:
               425-903
               

               Cow position:
               chr26:9859926-9860419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               331
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               35, 46
               

               Conread position:
               495-878
               

               Cow position:
               chr26:21826319-21826714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               675-928
               

               Cow position:
               chr26:21349778-21349516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               38, 49
               

               Conread position:
               126-667
               

               Cow position:
               chr27:25116555-25115997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               571
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 228
               

               Conread position:
               126-936
               

               Cow position:
               chr27:26556710-26557516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               838
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 104
               

               Conread position:
               496-916
               

               Cow position:
               chr27:27307361-27306924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 119
               

               Conread position:
               496-936
               

               Cow position:
               chr27:25003534-25003992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               17, 242
               

               Conread position:
               66-355
               

               Cow position:
               chr28:21358382-21358071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               23, 53
               

               Conread position:
               67-344
               

               Cow position:
               chr28:24666975-24666693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               62, 54
               

               Conread position:
               83-469
               

               Cow position:
               chr28:26006813-26006419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               191-928
               

               Cow position:
               chr28:21928665-21927913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               774
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               230-934
               

               Cow position:
               chr28:8335752-8335049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               735
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 45
               

               Conread position:
               240-771
               

               Cow position:
               chr28:30564398-30563849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               559
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 93
               

               Conread position:
               257-801
               

               Cow position:
               chr28:12233160-12233720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               578
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 27
               

               Conread position:
               472-624
               

               Cow position:
               chr28:24703606-24703454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               40, 68
               

               Conread position:
               495-935
               

               Cow position:
               chr28:26006366-26005908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 48
               

               Conread position:
               496-936
               

               Cow position:
               chr28:5764339-5763887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               512-918
               

               Cow position:
               chr28:28876320-28876749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 27
               

               Conread position:
               727-932
               

               Cow position:
               chr28:25994013-25993804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               15, 151
               

               Conread position:
               779-918
               

               Cow position:
               chr28:25652756-25652896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               58, 26
               

               Conread position:
               74-918
               

               Cow position:
               chr29:34752931-34753823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               906
               

               Alignm identity:
               602
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 10
               

               Conread position:
               74-936
               

               Cow position:
               chr29:103354-102482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               899
               

               Alignm identity:
               613
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               105-318
               

               Cow position:
               chr29:27601202-27600986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               365-915
               

               Cow position:
               chr29:6771500-6770924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               585
               

               Alignm identity:
               375
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               496-936
               

               Cow position:
               chr29:10849121-10849561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 70
               

               Conread position:
               636-936
               

               Cow position:
               chr29:5181765-5181462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               60, 54
               

               Conread position:
               724-907
               

               Cow position:
               chr29:6874887-6875071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               108, 48
               

               Conread position:
               68-310
               

               Cow position:
               chr3:15054854-15055099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               60, 15
               

               Conread position:
               70-926
               

               Cow position:
               chr3:63005914-63006776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               899
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               81-575
               

               Cow position:
               chr3:40045711-40046214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               519
               

               Alignm identity:
               335
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               117, 50
               

               Conread position:
               120-357
               

               Cow position:
               chr3:3907739-3907995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               8, 234
               

               Conread position:
               159-936
               

               Cow position:
               chr3:26947873-26947099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               804
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 75
               

               Conread position:
               240-936
               

               Cow position:
               chr3:6879092-6879793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               727
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 108
               

               Conread position:
               244-936
               

               Cow position:
               chr3:54343280-54344025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               752
               

               Alignm identity:
               476
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               89, 18
               

               Conread position:
               247-928
               

               Cow position:
               chr3:34094805-34095499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               713
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 205
               

               Conread position:
               261-936
               

               Cow position:
               chr3:60211121-60211820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               713
               

               Alignm identity:
               437
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               104, 62
               

               Conread position:
               306-753
               

               Cow position:
               chr3:14587145-14586667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               311
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               27, 245
               

               Conread position:
               359-880
               

               Cow position:
               chr3:32817109-32816573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               548
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 6
               

               Conread position:
               377-912
               

               Cow position:
               chr3:2854999-2855548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               563
               

               Alignm identity:
               359
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               38, 22
               

               Conread position:
               435-910
               

               Cow position:
               chr3:52865870-52866353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               319
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               57, 114
               

               Conread position:
               492-935
               

               Cow position:
               chr3:30928420-30927963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               292
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               493-927
               

               Cow position:
               chr3:66636964-66636510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               288
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               20, 337
               

               Conread position:
               495-916
               

               Cow position:
               chr3:3908126-3908567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 248
               

               Conread position:
               496-935
               

               Cow position:
               chr3:34397091-34397549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               299
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               17, 243
               

               Conread position:
               497-910
               

               Cow position:
               chr3:17950375-17949962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               291
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               16, 43
               

               Conread position:
               498-916
               

               Cow position:
               chr3:15055567-15055982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 38
               

               Conread position:
               499-910
               

               Cow position:
               chr3:3979140-3978716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               508-936
               

               Cow position:
               chr3:39325572-39325133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               308
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               114, 34
               

               Conread position:
               557-852
               

               Cow position:
               chr3:56706306-56706615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               75, 180
               

               Conread position:
               557-918
               

               Cow position:
               chr3:2124381-2123999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               77, 182
               

               Conread position:
               570-927
               

               Cow position:
               chr3:61276140-61275774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 46
               

               Conread position:
               675-927
               

               Cow position:
               chr3:66116478-66116723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               39, 49
               

               Conread position:
               678-877
               

               Cow position:
               chr3:6684157-6683957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               35, 138
               

               Conread position:
               717-936
               

               Cow position:
               chr3:25681584-25681808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               54, 5
               

               Conread position:
               66-331
               

               Cow position:
               chr4:28830101-28829831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               87-936
               

               Cow position:
               chr4:46663234-46662379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               892
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 34
               

               Conread position:
               135-936
               

               Cow position:
               chr4:25734799-25733976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               839
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 14
               

               Conread position:
               241-841
               

               Cow position:
               chr4:27442178-27441544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               642
               

               Alignm identity:
               410
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               92, 17
               

               Conread position:
               241-854
               

               Cow position:
               chr4:58835386-58836045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               667
               

               Alignm identity:
               420
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               64, 69
               

               Conread position:
               241-936
               

               Cow position:
               chr4:41778423-41779135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               730
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 44
               

               Conread position:
               678-936
               

               Cow position:
               chr4:54966463-54966199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 48
               

               Conread position:
               90-925
               

               Cow position:
               chr5:27061500-27062368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               888
               

               Alignm identity:
               606
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               114-343
               

               Cow position:
               chr5:49594367-49594607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               165-747
               

               Cow position:
               chr5:28044911-28045523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               624
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 188
               

               Conread position:
               237-934
               

               Cow position:
               chr5:13424770-13424043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               741
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 59
               

               Conread position:
               241-600
               

               Cow position:
               chr5:61565341-61564969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 35
               

               Conread position:
               241-936
               

               Cow position:
               chr5:51951237-51950529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               726
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 92
               

               Conread position:
               242-936
               

               Cow position:
               chr5:29438650-29439361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               727
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               248-918
               

               Cow position:
               chr5:39247859-39248545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               704
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 89
               

               Conread position:
               259-936
               

               Cow position:
               chr5:50159328-50158636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               708
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 34
               

               Conread position:
               359-628
               

               Cow position:
               chr5:7503686-7503960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               51, 72
               

               Conread position:
               364-675
               

               Cow position:
               chr5:27683961-27684288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               48, 73
               

               Conread position:
               364-928
               

               Cow position:
               chr5:57976362-57975781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               592
               

               Alignm identity:
               373
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               31, 117
               

               Conread position:
               391-928
               

               Cow position:
               chr5:75145693-75145124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               577
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 165
               

               Conread position:
               409-832
               

               Cow position:
               chr5:3820534-3820094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               288
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               415-764
               

               Cow position:
               chr5:63823828-63824190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               87, 46
               

               Conread position:
               415-928
               

               Cow position:
               chr5:57907182-57906675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               527
               

               Alignm identity:
               327
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               42, 64
               

               Conread position:
               495-935
               

               Cow position:
               chr5:27486789-27486340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               303
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               496-936
               

               Cow position:
               chr5:47775021-47774563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 331
               

               Conread position:
               503-918
               

               Cow position:
               chr5:27338119-27337695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               508-916
               

               Cow position:
               chr5:12682757-12683160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               271
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               147, 31
               

               Conread position:
               508-926
               

               Cow position:
               chr5:49594747-49595185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               303
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               28, 201
               

               Conread position:
               635-936
               

               Cow position:
               chr5:61274889-61275196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               43, 92
               

               Conread position:
               675-928
               

               Cow position:
               chr5:42749870-42749615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 56
               

               Conread position:
               677-936
               

               Cow position:
               chr5:31597678-31597415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 27
               

               Conread position:
               56-357
               

               Cow position:
               chr6:4904878-4905193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               72, 27
               

               Conread position:
               148-595
               

               Cow position:
               chr6:58064598-58064145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               301
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               14, 126
               

               Conread position:
               239-357
               

               Cow position:
               chr6:6100815-6100931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               241-935
               

               Cow position:
               chr6:16598582-16597862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               733
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 34
               

               Conread position:
               242-918
               

               Cow position:
               chr6:9751830-9752503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               703
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 20
               

               Conread position:
               248-605
               

               Cow position:
               chr6:10025892-10026279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               83, 31
               

               Conread position:
               295-928
               

               Cow position:
               chr6:41152181-41151526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               670
               

               Alignm identity:
               432
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               38, 76
               

               Conread position:
               365-600
               

               Cow position:
               chr6:37476839-37476605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               47, 113
               

               Conread position:
               368-936
               

               Cow position:
               chr6:35421581-35422163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               596
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 105
               

               Conread position:
               409-936
               

               Cow position:
               chr6:7181297-7181827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               552
               

               Alignm identity:
               359
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               74, 9
               

               Conread position:
               414-935
               

               Cow position:
               chr6:12679992-12679470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               535
               

               Alignm identity:
               324
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               57, 24
               

               Conread position:
               495-918
               

               Cow position:
               chr6:6101019-6101418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               292
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               495-935
               

               Cow position:
               chr6:10639449-10639020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 45
               

               Conread position:
               498-935
               

               Cow position:
               chr6:6477579-6478023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               307
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               498-936
               

               Cow position:
               chr6:38231175-38230724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               305
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               114, 40
               

               Conread position:
               634-936
               

               Cow position:
               chr6:10026529-10026831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               43, 71
               

               Conread position:
               722-918
               

               Cow position:
               chr6:50121153-50121352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               71, 122
               

               Conread position:
               46-936
               

               Cow position:
               chr7:20431148-20432066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               943
               

               Alignm identity:
               650
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 37
               

               Conread position:
               58-236
               

               Cow position:
               chr7:47049215-47049036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               70, 26
               

               Conread position:
               165-889
               

               Cow position:
               chr7:26929129-26929871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               764
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 213
               

               Conread position:
               173-369
               

               Cow position:
               chr7:51013228-51013032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 70
               

               Conread position:
               242-597
               

               Cow position:
               chr7:1738408-1738771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               131, 93
               

               Conread position:
               258-574
               

               Cow position:
               chr7:67494197-67493872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 249
               

               Conread position:
               258-910
               

               Cow position:
               chr7:18936703-18937393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               697
               

               Alignm identity:
               431
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               295-924
               

               Cow position:
               chr7:44681771-44681129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               664
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 24
               

               Conread position:
               306-918
               

               Cow position:
               chr7:23450251-23450870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               639
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 21
               

               Conread position:
               364-857
               

               Cow position:
               chr7:55281524-55282032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               518
               

               Alignm identity:
               330
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               48, 133
               

               Conread position:
               364-881
               

               Cow position:
               chr7:18446060-18446602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               548
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 101
               

               Conread position:
               364-936
               

               Cow position:
               chr7:25249367-25248769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               607
               

               Alignm identity:
               394
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               387-928
               

               Cow position:
               chr7:63962132-63962717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               589
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 6
               

               Conread position:
               395-936
               

               Cow position:
               chr7:17959512-17958946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               373
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               19, 156
               

               Conread position:
               435-913
               

               Cow position:
               chr7:63019739-63019242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               326
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               38, 114
               

               Conread position:
               490-915
               

               Cow position:
               chr7:24935216-24935653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               289
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               6, 27
               

               Conread position:
               498-910
               

               Cow position:
               chr7:53989689-53989275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               293
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               16, 42
               

               Conread position:
               526-916
               

               Cow position:
               chr7:41881431-41881830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               107, 19
               

               Conread position:
               536-935
               

               Cow position:
               chr7:21976949-21977364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               76, 54
               

               Conread position:
               561-869
               

               Cow position:
               chr7:35838515-35838191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               70, 14
               

               Conread position:
               564-936
               

               Cow position:
               chr7:49444231-49443846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               268
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               634-880
               

               Cow position:
               chr7:22678743-22678483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 150
               

               Conread position:
               678-878
               

               Cow position:
               chr7:30157560-30157762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               691-846
               

               Cow position:
               chr7:14385574-14385728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 19
               

               Conread position:
               28-357
               

               Cow position:
               chr8:38608345-38608680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               65-872
               

               Cow position:
               chr8:44692743-44691880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               870
               

               Alignm identity:
               561
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 18
               

               Conread position:
               66-606
               

               Cow position:
               chr8:25541541-25540982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               573
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               70-327
               

               Cow position:
               chr8:61036320-61036574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               60, 50
               

               Conread position:
               99-307
               

               Cow position:
               chr8:24421249-24421448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               165-337
               

               Cow position:
               chr8:53426713-53426535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               63, 38
               

               Conread position:
               174-864
               

               Cow position:
               chr8:32001659-32002377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               730
               

               Alignm identity:
               456
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               8, 58
               

               Conread position:
               221-628
               

               Cow position:
               chr8:8905685-8906096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               239-916
               

               Cow position:
               chr8:11971183-11971869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               709
               

               Alignm identity:
               439
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               91, 52
               

               Conread position:
               239-918
               

               Cow position:
               chr8:50752087-50751395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               711
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 102
               

               Conread position:
               241-587
               

               Cow position:
               chr8:45694721-45695073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               128, 92
               

               Conread position:
               286-597
               

               Cow position:
               chr8:27367256-27366930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               47, 269
               

               Conread position:
               288-926
               

               Cow position:
               chr8:12544964-12545635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               687
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 52
               

               Conread position:
               364-918
               

               Cow position:
               chr8:42466435-42465867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               580
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 177
               

               Conread position:
               409-910
               

               Cow position:
               chr8:8535106-8535596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               514
               

               Alignm identity:
               332
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               68, 16
               

               Conread position:
               496-711
               

               Cow position:
               chr8:53424150-53423928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               18, 44
               

               Conread position:
               498-916
               

               Cow position:
               chr8:21204888-21204457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               303
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               16, 41
               

               Conread position:
               505-936
               

               Cow position:
               chr8:9541594-9542015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               524-918
               

               Cow position:
               chr8:45162435-45162835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               109, 14
               

               Conread position:
               670-936
               

               Cow position:
               chr8:12714924-12714652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               38, 56
               

               Conread position:
               680-916
               

               Cow position:
               chr8:25540186-25539941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 46
               

               Conread position:
               139-909
               

               Cow position:
               chr9:2005891-2006696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               820
               

               Alignm identity:
               553
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               158-936
               

               Cow position:
               chr9:64117398-64116607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               819
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 199
               

               Conread position:
               238-918
               

               Cow position:
               chr9:2112987-2112299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               715
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 23
               

               Conread position:
               357-918
               

               Cow position:
               chr9:56863141-56863711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               591
               

               Alignm identity:
               388
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               359-908
               

               Cow position:
               chr9:249016-249567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               366
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               364-848
               

               Cow position:
               chr9:26585542-26586045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               515
               

               Alignm identity:
               332
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               45, 107
               

               Conread position:
               495-934
               

               Cow position:
               chr9:59424308-59423853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               496-936
               

               Cow position:
               chr9:29358874-29358413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               304
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               17, 247
               

               Conread position:
               557-928
               

               Cow position:
               chr9:11321244-11320870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               272
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               109, 15
               

               Conread position:
               71-224
               

               Cow position:
               chrX:17669839-17669990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               131-457
               

               Cow position:
               chrX:28548395-28548044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               72, 22
               

               Conread position:
               148-918
               

               Cow position:
               chrX:30371286-30372077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               809
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 168
               

               Conread position:
               242-917
               

               Cow position:
               chrX:13051136-13050427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               719
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 23
               

               Conread position:
               380-910
               

               Cow position:
               chrX:28605179-28605728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               558
               

               Alignm identity:
               341
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 19
               

               Conread position:
               408-936
               

               Cow position:
               chrX:31034259-31033713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               551
               

               Alignm identity:
               354
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               85, 139
               

               Conread position:
               413-889
               

               Cow position:
               chrX:23220237-23219753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               311
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               76, 49
               

               Conread position:
               430-876
               

               Cow position:
               chrX:35015655-35015200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               296
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               59, 101
               

               Conread position:
               435-902
               

               Cow position:
               chrX:11742724-11742248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 104
               

               Conread position:
               495-936
               

               Cow position:
               chrX:22133237-22133698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               508-936
               

               Cow position:
               chrX:17672151-17672596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 31
               

               Conread position:
               574-936
               

               Cow position:
               chrX:28545865-28545490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               255
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               59, 167
               

               Conread position:
               781-936
               

               Cow position:
               chrX:42862889-42863046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               54, 31
Conread position:	66-357
Cow position:	chr10:61296692-61296382 (view UCSC Genome Browser custom track)
Alignm length:	317
Alignm identity:	219
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	34, 16
Conread position:	99-854
Cow position:	chr10:54126835-54126075 (view UCSC Genome Browser custom track)
Alignm length:	790
Alignm identity:	523
Alignm E-value:	0
Alignm gaps (pig, cow):	30, 22
Conread position:	109-905
Cow position:	chr10:29069029-29068234 (view UCSC Genome Browser custom track)
Alignm length:	825
Alignm identity:	521
Alignm E-value:	0
Alignm gaps (pig, cow):	34, 128
Conread position:	159-601
Cow position:	chr10:42657318-42656864 (view UCSC Genome Browser custom track)
Alignm length:	462
Alignm identity:	318
Alignm E-value:	0
Alignm gaps (pig, cow):	7, 80
Conread position:	159-678
Cow position:	chr10:14950294-14949752 (view UCSC Genome Browser custom track)
Alignm length:	550
Alignm identity:	351
Alignm E-value:	3e-34
Alignm gaps (pig, cow):	29, 48
Conread position:	166-928
Cow position:	chr10:49309029-49308240 (view UCSC Genome Browser custom track)
Alignm length:	806
Alignm identity:	522
Alignm E-value:	0
Alignm gaps (pig, cow):	8, 22
Conread position:	239-909
Cow position:	chr10:26596761-26596100 (view UCSC Genome Browser custom track)
Alignm length:	690
Alignm identity:	429
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	132, 95
Conread position:	239-913
Cow position:	chr10:60488814-60488156 (view UCSC Genome Browser custom track)
Alignm length:	691
Alignm identity:	455
Alignm E-value:	0
Alignm gaps (pig, cow):	179, 30
Conread position:	242-936
Cow position:	chr10:15863555-15864281 (view UCSC Genome Browser custom track)
Alignm length:	741
Alignm identity:	508
Alignm E-value:	0
Alignm gaps (pig, cow):	91, 222
Conread position:	243-936
Cow position:	chr10:53322110-53322825 (view UCSC Genome Browser custom track)
Alignm length:	726
Alignm identity:	458
Alignm E-value:	0
Alignm gaps (pig, cow):	120, 226
Conread position:	298-876
Cow position:	chr10:8328636-8329220 (view UCSC Genome Browser custom track)
Alignm length:	603
Alignm identity:	416
Alignm E-value:	0
Alignm gaps (pig, cow):	114, 31
Conread position:	415-936
Cow position:	chr10:10415008-10414472 (view UCSC Genome Browser custom track)
Alignm length:	548
Alignm identity:	358
Alignm E-value:	2.00386e-43
Alignm gaps (pig, cow):	74, 123
Conread position:	430-926
Cow position:	chr10:42735558-42735048 (view UCSC Genome Browser custom track)
Alignm length:	527
Alignm identity:	340
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	48, 116
Conread position:	464-910
Cow position:	chr10:61296311-61295849 (view UCSC Genome Browser custom track)
Alignm length:	469
Alignm identity:	305
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	27, 82
Conread position:	496-882
Cow position:	chr10:1938789-1939192 (view UCSC Genome Browser custom track)
Alignm length:	407
Alignm identity:	269
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	21, 245
Conread position:	512-927
Cow position:	chr10:34684920-34684486 (view UCSC Genome Browser custom track)
Alignm length:	438
Alignm identity:	281
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	25, 92
Conread position:	554-928
Cow position:	chr10:44516670-44517066 (view UCSC Genome Browser custom track)
Alignm length:	398
Alignm identity:	256
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	64, 54
Conread position:	634-928
Cow position:	chr10:34319001-34319311 (view UCSC Genome Browser custom track)
Alignm length:	311
Alignm identity:	209
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	45, 0
Conread position:	675-927
Cow position:	chr10:46189596-46189344 (view UCSC Genome Browser custom track)
Alignm length:	258
Alignm identity:	183
Alignm E-value:	3e-34
Alignm gaps (pig, cow):	38, 51
Conread position:	675-936
Cow position:	chr10:24300811-24301073 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	182
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	125, 51