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Cow genome map

           
Conread name:
           
Ss1.1-Tes1-TES01A020049.5
        

               
Conread position:
               
11-913
               

               
Cow position:
               
chr1:4348716-4349594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
903
               

               
Alignm identity:
               
759
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1317-1509
               

               
Cow position:
               
chr1:1981061-1980874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
131, 62
               

               
Conread position:
               
1319-1493
               

               
Cow position:
               
chr1:45315582-45315410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
124, 61
               

               
Conread position:
               
1319-1497
               

               
Cow position:
               
chr1:71946030-71945854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1319-1497
               

               
Cow position:
               
chr1:91023413-91023244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1319-1508
               

               
Cow position:
               
chr1:81615708-81615886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1319-1509
               

               
Cow position:
               
chr1:24133009-24132824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
124, 61
               

               
Conread position:
               
1319-1518
               

               
Cow position:
               
chr1:102730708-102730509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
124, 64
               

               
Conread position:
               
1319-1522
               

               
Cow position:
               
chr1:1496478-1496277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
1319-1523
               

               
Cow position:
               
chr1:20104320-20104523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
126, 68
               

               
Conread position:
               
1323-1516
               

               
Cow position:
               
chr1:102529801-102529603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
1327-1490
               

               
Cow position:
               
chr1:44814608-44814446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
116, 140
               

               
Conread position:
               
1362-1517
               

               
Cow position:
               
chr1:67346246-67346406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1300-1482
               

               
Cow position:
               
chr10:4329992-4329811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
1306-1505
               

               
Cow position:
               
chr10:45371067-45371260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
137, 74
               

               
Conread position:
               
1319-1464
               

               
Cow position:
               
chr10:19679122-19679268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1319-1477
               

               
Cow position:
               
chr10:27136664-27136509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
1319-1478
               

               
Cow position:
               
chr10:6489896-6490056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
1319-1483
               

               
Cow position:
               
chr10:28178798-28178631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 25
               

               
Conread position:
               
1319-1504
               

               
Cow position:
               
chr10:10027595-10027775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
1319-1511
               

               
Cow position:
               
chr10:49923349-49923154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1320-1513
               

               
Cow position:
               
chr10:16641906-16641718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
1320-1521
               

               
Cow position:
               
chr10:58044103-58043907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
123, 59
               

               
Conread position:
               
1322-1509
               

               
Cow position:
               
chr10:31027615-31027432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
123, 77
               

               
Conread position:
               
8-906
               

               
Cow position:
               
chr11:34979437-34980327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
899
               

               
Alignm identity:
               
776
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 0
               

               
Conread position:
               
11-989
               

               
Cow position:
               
chr11:84762085-84761111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
979
               

               
Alignm identity:
               
597
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 0
               

               
Conread position:
               
683-905
               

               
Cow position:
               
chr11:84761119-84760896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
776-905
               

               
Cow position:
               
chr11:75238923-75238797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 109
               

               
Conread position:
               
1317-1492
               

               
Cow position:
               
chr11:20238705-20238873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
128, 82
               

               
Conread position:
               
1319-1497
               

               
Cow position:
               
chr11:62620407-62620580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
124, 61
               

               
Conread position:
               
1319-1499
               

               
Cow position:
               
chr11:34646620-34646803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1319-1510
               

               
Cow position:
               
chr11:65431549-65431734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
1322-1501
               

               
Cow position:
               
chr11:30192212-30192386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1322-1518
               

               
Cow position:
               
chr11:18119537-18119727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1305-1506
               

               
Cow position:
               
chr12:25456405-25456614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1317-1506
               

               
Cow position:
               
chr12:3454702-3454887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 31
               

               
Conread position:
               
1319-1501
               

               
Cow position:
               
chr12:2835413-2835591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
122, 52
               

               
Conread position:
               
1319-1524
               

               
Cow position:
               
chr12:22047931-22048135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 63
               

               
Conread position:
               
1320-1517
               

               
Cow position:
               
chr12:8710994-8711184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
125, 60
               

               
Conread position:
               
1322-1508
               

               
Cow position:
               
chr12:30919438-30919628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 113
               

               
Conread position:
               
1325-1503
               

               
Cow position:
               
chr12:4014417-4014238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
88, 159
               

               
Conread position:
               
1319-1494
               

               
Cow position:
               
chr13:28081659-28081487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
124, 61
               

               
Conread position:
               
1319-1513
               

               
Cow position:
               
chr13:28605454-28605644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
1319-1524
               

               
Cow position:
               
chr13:53619941-53619741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
1321-1504
               

               
Cow position:
               
chr13:53850759-53850578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
122, 60
               

               
Conread position:
               
1359-1482
               

               
Cow position:
               
chr13:12699231-12699109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1381-1518
               

               
Cow position:
               
chr13:20653981-20654116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
1319-1463
               

               
Cow position:
               
chr14:27848179-27848035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1319-1482
               

               
Cow position:
               
chr14:32784121-32784283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
1319-1483
               

               
Cow position:
               
chr14:36166936-36166776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
124, 24
               

               
Conread position:
               
1319-1494
               

               
Cow position:
               
chr14:4848342-4848174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 29
               

               
Conread position:
               
1319-1494
               

               
Cow position:
               
chr14:48838589-48838416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
125, 61
               

               
Conread position:
               
1319-1496
               

               
Cow position:
               
chr14:18301955-18301780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 122
               

               
Conread position:
               
1319-1501
               

               
Cow position:
               
chr14:20640635-20640809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
1319-1501
               

               
Cow position:
               
chr14:47224371-47224550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
124, 161
               

               
Conread position:
               
1319-1513
               

               
Cow position:
               
chr14:24746460-24746263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 163
               

               
Conread position:
               
159-426
               

               
Cow position:
               
chr15:16498963-16498708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1312-1498
               

               
Cow position:
               
chr15:26380696-26380878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
1319-1484
               

               
Cow position:
               
chr15:41056163-41056326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 120
               

               
Conread position:
               
1319-1492
               

               
Cow position:
               
chr15:23275583-23275410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
33, 29
               

               
Conread position:
               
1319-1496
               

               
Cow position:
               
chr15:26896653-26896828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 63
               

               
Conread position:
               
1319-1506
               

               
Cow position:
               
chr15:848684-848506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
154, 61
               

               
Conread position:
               
1319-1508
               

               
Cow position:
               
chr15:2968378-2968192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
1319-1510
               

               
Cow position:
               
chr15:15154341-15154155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1319-1517
               

               
Cow position:
               
chr15:28099153-28098961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
129, 61
               

               
Conread position:
               
1319-1519
               

               
Cow position:
               
chr15:5964062-5964265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 29
               

               
Conread position:
               
1319-1523
               

               
Cow position:
               
chr15:36435246-36435045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
1322-1491
               

               
Cow position:
               
chr15:2931529-2931694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
121, 61
               

               
Conread position:
               
1324-1482
               

               
Cow position:
               
chr15:24124768-24124607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
1327-1508
               

               
Cow position:
               
chr15:47920117-47920287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
118, 55
               

               
Conread position:
               
3-913
               

               
Cow position:
               
chr16:20041421-20042326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
912
               

               
Alignm identity:
               
776
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
870, 214
               

               
Conread position:
               
19-902
               

               
Cow position:
               
chr16:48576970-48576108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
885
               

               
Alignm identity:
               
748
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
466, 65
               

               
Conread position:
               
28-868
               

               
Cow position:
               
chr16:15884777-15883937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
853
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
581, 140
               

               
Conread position:
               
801-907
               

               
Cow position:
               
chr16:50938437-50938333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1319-1464
               

               
Cow position:
               
chr16:16025485-16025632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1319-1478
               

               
Cow position:
               
chr16:33198390-33198231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 61
               

               
Conread position:
               
1319-1492
               

               
Cow position:
               
chr16:21442562-21442394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
1319-1502
               

               
Cow position:
               
chr16:24142910-24142731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 117
               

               
Conread position:
               
1319-1508
               

               
Cow position:
               
chr16:3304072-3304268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
94, 110
               

               
Conread position:
               
1320-1500
               

               
Cow position:
               
chr16:24674628-24674447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
121, 58
               

               
Conread position:
               
1320-1501
               

               
Cow position:
               
chr16:10011803-10011623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
32, 28
               

               
Conread position:
               
1306-1483
               

               
Cow position:
               
chr17:24824315-24824493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 97
               

               
Conread position:
               
1306-1509
               

               
Cow position:
               
chr17:13940245-13940046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
137, 8
               

               
Conread position:
               
1306-1520
               

               
Cow position:
               
chr17:32027376-32027163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
137, 76
               

               
Conread position:
               
1307-1520
               

               
Cow position:
               
chr17:20884600-20884810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
173, 51
               

               
Conread position:
               
1319-1477
               

               
Cow position:
               
chr17:21325421-21325585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1319-1479
               

               
Cow position:
               
chr17:7810666-7810503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
1319-1480
               

               
Cow position:
               
chr17:32333002-32332848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1319-1487
               

               
Cow position:
               
chr17:4105905-4105741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1319-1487
               

               
Cow position:
               
chr17:4121641-4121476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
69, 119
               

               
Conread position:
               
1319-1505
               

               
Cow position:
               
chr17:24895162-24895343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
1319-1506
               

               
Cow position:
               
chr17:27606606-27606782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
129, 61
               

               
Conread position:
               
1319-1511
               

               
Cow position:
               
chr17:20929330-20929521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 55
               

               
Conread position:
               
1319-1522
               

               
Cow position:
               
chr17:21718908-21718710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 62
               

               
Conread position:
               
1320-1498
               

               
Cow position:
               
chr17:32138334-32138153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1313-1498
               

               
Cow position:
               
chr18:11233423-11233609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
1319-1482
               

               
Cow position:
               
chr18:33896403-33896241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
154, 119
               

               
Conread position:
               
1319-1491
               

               
Cow position:
               
chr18:1954574-1954400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 108
               

               
Conread position:
               
1319-1507
               

               
Cow position:
               
chr18:41025114-41024916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1319-1510
               

               
Cow position:
               
chr18:1571222-1571036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
129, 61
               

               
Conread position:
               
1319-1480
               

               
Cow position:
               
chr19:26269197-26269033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
94, 61
               

               
Conread position:
               
1319-1485
               

               
Cow position:
               
chr19:6344111-6344279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
1319-1495
               

               
Cow position:
               
chr19:27968659-27968489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
122, 61
               

               
Conread position:
               
1319-1499
               

               
Cow position:
               
chr19:44572116-44572299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1319-1504
               

               
Cow position:
               
chr19:34757965-34757779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 167
               

               
Conread position:
               
1319-1511
               

               
Cow position:
               
chr19:4486113-4485926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 40
               

               
Conread position:
               
1319-1518
               

               
Cow position:
               
chr19:53189818-53189620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
122, 63
               

               
Conread position:
               
1320-1521
               

               
Cow position:
               
chr19:42217278-42217080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
1318-1507
               

               
Cow position:
               
chr2:75562055-75562238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
1319-1510
               

               
Cow position:
               
chr2:80275245-80275060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
124, 61
               

               
Conread position:
               
1319-1511
               

               
Cow position:
               
chr2:24393651-24393458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 22
               

               
Conread position:
               
1321-1517
               

               
Cow position:
               
chr2:3773276-3773086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
124, 78
               

               
Conread position:
               
1322-1494
               

               
Cow position:
               
chr2:21410272-21410445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 158
               

               
Conread position:
               
11-114
               

               
Cow position:
               
chr20:19037770-19037873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
129-903
               

               
Cow position:
               
chr20:19037926-19038691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
776
               

               
Alignm identity:
               
686
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
744, 471
               

               
Conread position:
               
1306-1516
               

               
Cow position:
               
chr20:36779650-36779437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
1319-1501
               

               
Cow position:
               
chr20:8556178-8555998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 61
               

               
Conread position:
               
10-872
               

               
Cow position:
               
chr21:37091321-37092166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
863
               

               
Alignm identity:
               
747
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
1309-1494
               

               
Cow position:
               
chr21:39845695-39845881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 172
               

               
Conread position:
               
1319-1474
               

               
Cow position:
               
chr21:29069214-29069061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
124, 61
               

               
Conread position:
               
1319-1479
               

               
Cow position:
               
chr21:71699-71852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
124, 29
               

               
Conread position:
               
1319-1481
               

               
Cow position:
               
chr21:868812-868651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
124, 63
               

               
Conread position:
               
1319-1520
               

               
Cow position:
               
chr21:44825774-44825569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
66, 108
               

               
Conread position:
               
1314-1482
               

               
Cow position:
               
chr22:7584202-7584041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
9, 67
               

               
Conread position:
               
1319-1476
               

               
Cow position:
               
chr22:33030843-33031005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1319-1490
               

               
Cow position:
               
chr22:1983893-1984067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1319-1509
               

               
Cow position:
               
chr22:3250949-3250752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
71, 167
               

               
Conread position:
               
1319-1509
               

               
Cow position:
               
chr22:8324284-8324476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
93, 162
               

               
Conread position:
               
1319-1515
               

               
Cow position:
               
chr22:33373283-33373476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
33, 29
               

               
Conread position:
               
1319-1522
               

               
Cow position:
               
chr22:9372566-9372772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 39
               

               
Conread position:
               
10-899
               

               
Cow position:
               
chr23:9812001-9811114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
890
               

               
Alignm identity:
               
813
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
869, 0
               

               
Conread position:
               
1317-1499
               

               
Cow position:
               
chr23:5426482-5426661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
126, 54
               

               
Conread position:
               
1317-1501
               

               
Cow position:
               
chr23:27849045-27849222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
166, 65
               

               
Conread position:
               
1319-1465
               

               
Cow position:
               
chr23:22238771-22238629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1319-1491
               

               
Cow position:
               
chr23:3967509-3967337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
124, 166
               

               
Conread position:
               
1319-1498
               

               
Cow position:
               
chr23:8698471-8698649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 64
               

               
Conread position:
               
1319-1499
               

               
Cow position:
               
chr23:5451369-5451547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
126, 59
               

               
Conread position:
               
1319-1504
               

               
Cow position:
               
chr23:24966412-24966229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
124, 72
               

               
Conread position:
               
1319-1524
               

               
Cow position:
               
chr23:25990387-25990189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
1322-1493
               

               
Cow position:
               
chr23:534281-534445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
123, 58
               

               
Conread position:
               
1309-1474
               

               
Cow position:
               
chr24:33944415-33944579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
134, 71
               

               
Conread position:
               
1310-1524
               

               
Cow position:
               
chr24:7390322-7390100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 38
               

               
Conread position:
               
1316-1512
               

               
Cow position:
               
chr24:21656427-21656621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
1319-1482
               

               
Cow position:
               
chr24:27284840-27285005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
1319-1499
               

               
Cow position:
               
chr24:36286593-36286768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
124, 63
               

               
Conread position:
               
1319-1523
               

               
Cow position:
               
chr24:37823551-37823747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
126, 60
               

               
Conread position:
               
11-335
               

               
Cow position:
               
chr25:25478482-25478802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
357-901
               

               
Cow position:
               
chr25:25478802-25479330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1319-1496
               

               
Cow position:
               
chr25:28597564-28597387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 106
               

               
Conread position:
               
1319-1501
               

               
Cow position:
               
chr25:22348417-22348237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 57
               

               
Conread position:
               
1319-1504
               

               
Cow position:
               
chr25:24115270-24115090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
120, 82
               

               
Conread position:
               
1319-1513
               

               
Cow position:
               
chr25:15573434-15573628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
131, 63
               

               
Conread position:
               
1319-1515
               

               
Cow position:
               
chr25:32907984-32908193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1324-1521
               

               
Cow position:
               
chr25:7750503-7750687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1319-1480
               

               
Cow position:
               
chr26:20291627-20291473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 61
               

               
Conread position:
               
1319-1481
               

               
Cow position:
               
chr26:7314687-7314849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
1319-1482
               

               
Cow position:
               
chr26:24240744-24240906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
33, 28
               

               
Conread position:
               
1319-1495
               

               
Cow position:
               
chr26:647661-647488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
124, 71
               

               
Conread position:
               
1321-1476
               

               
Cow position:
               
chr26:19446199-19446354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 96
               

               
Conread position:
               
1317-1512
               

               
Cow position:
               
chr27:31183486-31183292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
127, 65
               

               
Conread position:
               
1319-1477
               

               
Cow position:
               
chr27:15003070-15003223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
126, 80
               

               
Conread position:
               
1319-1503
               

               
Cow position:
               
chr27:426878-426698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
124, 63
               

               
Conread position:
               
1319-1503
               

               
Cow position:
               
chr27:15350439-15350622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
1319-1503
               

               
Cow position:
               
chr27:22748236-22748057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
1319-1517
               

               
Cow position:
               
chr27:24240268-24240068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
94, 63
               

               
Conread position:
               
1319-1521
               

               
Cow position:
               
chr27:10404206-10404402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
124, 40
               

               
Conread position:
               
1323-1520
               

               
Cow position:
               
chr27:9504460-9504263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
1308-1509
               

               
Cow position:
               
chr28:3257032-3257227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
1319-1482
               

               
Cow position:
               
chr28:4077293-4077127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1319-1494
               

               
Cow position:
               
chr28:4159008-4159186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 52
               

               
Conread position:
               
1319-1503
               

               
Cow position:
               
chr28:29500453-29500638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
129, 115
               

               
Conread position:
               
1319-1508
               

               
Cow position:
               
chr28:7350707-7350886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1319-1524
               

               
Cow position:
               
chr28:22332581-22332783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
129, 63
               

               
Conread position:
               
1322-1482
               

               
Cow position:
               
chr28:4013140-4013293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
121, 58
               

               
Conread position:
               
1322-1507
               

               
Cow position:
               
chr28:9705706-9705889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
124, 60
               

               
Conread position:
               
1312-1478
               

               
Cow position:
               
chr29:36357165-36357328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
1317-1523
               

               
Cow position:
               
chr29:25288879-25288675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
1319-1493
               

               
Cow position:
               
chr29:36530913-36531081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
1319-1497
               

               
Cow position:
               
chr29:28949019-28949204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1319-1502
               

               
Cow position:
               
chr29:19949353-19949527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
124, 61
               

               
Conread position:
               
1319-1514
               

               
Cow position:
               
chr29:16735270-16735464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 29
               

               
Conread position:
               
1294-1497
               

               
Cow position:
               
chr3:81087641-81087440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
1306-1500
               

               
Cow position:
               
chr3:3316807-3316610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 183
               

               
Conread position:
               
1306-1504
               

               
Cow position:
               
chr3:59604854-59605043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
137, 75
               

               
Conread position:
               
1306-1510
               

               
Cow position:
               
chr3:78258747-78258544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
1309-1519
               

               
Cow position:
               
chr3:45314358-45314571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1319-1481
               

               
Cow position:
               
chr3:3262810-3262643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
1319-1496
               

               
Cow position:
               
chr3:57641824-57641998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
124, 7
               

               
Conread position:
               
1319-1502
               

               
Cow position:
               
chr3:21959683-21959866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
124, 108
               

               
Conread position:
               
1319-1503
               

               
Cow position:
               
chr3:71497114-71496923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 40
               

               
Conread position:
               
1319-1508
               

               
Cow position:
               
chr3:69785600-69785411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
1320-1514
               

               
Cow position:
               
chr3:50768704-50768890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
125, 62
               

               
Conread position:
               
1321-1478
               

               
Cow position:
               
chr3:79196785-79196941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 65
               

               
Conread position:
               
1322-1492
               

               
Cow position:
               
chr3:68156750-68156918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1322-1500
               

               
Cow position:
               
chr3:30940833-30941004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1324-1495
               

               
Cow position:
               
chr3:27274557-27274720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
119, 56
               

               
Conread position:
               
1326-1520
               

               
Cow position:
               
chr3:65969198-65969396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
11-1097
               

               
Cow position:
               
chr4:6253703-6254760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1089
               

               
Alignm identity:
               
872
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
858, 389
               

               
Conread position:
               
1305-1504
               

               
Cow position:
               
chr4:63198346-63198149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
1306-1498
               

               
Cow position:
               
chr4:51769131-51769319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
167, 72
               

               
Conread position:
               
1319-1479
               

               
Cow position:
               
chr4:62794323-62794162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
83, 61
               

               
Conread position:
               
1319-1482
               

               
Cow position:
               
chr4:46435365-46435531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1319-1493
               

               
Cow position:
               
chr4:59002099-59001932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
1319-1503
               

               
Cow position:
               
chr4:69290702-69290523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
124, 62
               

               
Conread position:
               
1319-1513
               

               
Cow position:
               
chr4:37991630-37991812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
126, 84
               

               
Conread position:
               
1320-1482
               

               
Cow position:
               
chr4:19700137-19700304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 60
               

               
Conread position:
               
1320-1495
               

               
Cow position:
               
chr4:28660509-28660336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
125, 78
               

               
Conread position:
               
1307-1521
               

               
Cow position:
               
chr5:49821490-49821703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
1313-1520
               

               
Cow position:
               
chr5:15770388-15770181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
132, 68
               

               
Conread position:
               
1317-1482
               

               
Cow position:
               
chr5:35969604-35969774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1317-1483
               

               
Cow position:
               
chr5:65941178-65941017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
127, 55
               

               
Conread position:
               
1319-1485
               

               
Cow position:
               
chr5:56070933-56071093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
1319-1494
               

               
Cow position:
               
chr5:34288179-34288011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 59
               

               
Conread position:
               
1319-1501
               

               
Cow position:
               
chr5:57074257-57074086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1319-1509
               

               
Cow position:
               
chr5:38683577-38683764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
1319-1521
               

               
Cow position:
               
chr5:32975832-32976032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
1319-1523
               

               
Cow position:
               
chr5:39815427-39815226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
1320-1512
               

               
Cow position:
               
chr5:66582039-66582228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 28
               

               
Conread position:
               
1294-1498
               

               
Cow position:
               
chr6:3936841-3937048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
14, 90
               

               
Conread position:
               
1313-1494
               

               
Cow position:
               
chr6:17313817-17313996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
1319-1480
               

               
Cow position:
               
chr6:36938955-36939117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1319-1496
               

               
Cow position:
               
chr6:3351116-3351289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
126, 93
               

               
Conread position:
               
1319-1509
               

               
Cow position:
               
chr6:154557-154744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 121
               

               
Conread position:
               
1305-1492
               

               
Cow position:
               
chr7:62733253-62733446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
1316-1520
               

               
Cow position:
               
chr7:2739144-2738940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
127, 136
               

               
Conread position:
               
1317-1478
               

               
Cow position:
               
chr7:11784956-11784802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
1319-1492
               

               
Cow position:
               
chr7:32894158-32893982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1319-1497
               

               
Cow position:
               
chr7:4720141-4719964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
124, 63
               

               
Conread position:
               
1319-1497
               

               
Cow position:
               
chr7:36665415-36665587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
124, 25
               

               
Conread position:
               
1319-1501
               

               
Cow position:
               
chr7:8888382-8888558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
124, 40
               

               
Conread position:
               
1319-1506
               

               
Cow position:
               
chr7:53806733-53806538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
1319-1510
               

               
Cow position:
               
chr7:48714944-48715139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
116, 63
               

               
Conread position:
               
1317-1480
               

               
Cow position:
               
chr8:46235752-46235920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1319-1480
               

               
Cow position:
               
chr8:42112766-42112602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
1319-1482
               

               
Cow position:
               
chr8:3887391-3887547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1319-1497
               

               
Cow position:
               
chr8:30868673-30868498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
1319-1507
               

               
Cow position:
               
chr8:26305807-26305624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
1320-1497
               

               
Cow position:
               
chr8:16061128-16061305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
1320-1502
               

               
Cow position:
               
chr8:5468031-5467845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1321-1491
               

               
Cow position:
               
chr8:36531544-36531373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
124, 59
               

               
Conread position:
               
1300-1493
               

               
Cow position:
               
chr9:5104399-5104597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
1317-1506
               

               
Cow position:
               
chr9:41728241-41728060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
126, 14
               

               
Conread position:
               
1319-1485
               

               
Cow position:
               
chr9:33597967-33597793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1319-1490
               

               
Cow position:
               
chr9:34265076-34264899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1319-1504
               

               
Cow position:
               
chr9:26279188-26279371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
127, 63
               

               
Conread position:
               
1321-1503
               

               
Cow position:
               
chr9:6954270-6954449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
1322-1516
               

               
Cow position:
               
chr9:11506275-11506085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 26
               

               
Conread position:
               
1300-1499
               

               
Cow position:
               
chrX:4403369-4403570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
1317-1463
               

               
Cow position:
               
chrX:42381039-42380897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1319-1492
               

               
Cow position:
               
chrX:24633770-24633929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1319-1493
               

               
Cow position:
               
chrX:11656156-11656322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
122, 61
               

               
Conread position:
               
1319-1493
               

               
Cow position:
               
chrX:31983510-31983335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 163
               

               
Conread position:
               
1319-1498
               

               
Cow position:
               
chrX:26843194-26843012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
1319-1502
               

               
Cow position:
               
chrX:6599707-6599520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1319-1506
               

               
Cow position:
               
chrX:20957313-20957494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 61
               

               
Conread position:
               
1319-1511
               

               
Cow position:
               
chrX:34411921-34412111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
1319-1516
               

               
Cow position:
               
chrX:12095697-12095505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
1319-1519
               

               
Cow position:
               
chrX:15545957-15546152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1319-1522
               

               
Cow position:
               
chrX:20339817-20339617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
154, 22
               

               
Conread position:
               
1321-1502
               

               
Cow position:
               
chrX:35985895-35986069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1324-1509
               

               
Cow position:
               
chrX:34504968-34504792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
121, 39