Cow genome map
| Conread name: | Ss1.1-Tes1-TES01B060011.5 |
| Conread position: | 1564-1722 |
| Cow position: | chr1:82420220-82420385 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-209 |
| Cow position: | chr10:53690803-53691018 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 206-328 |
| Cow position: | chr10:53675376-53675254 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 207-328 |
| Cow position: | chr10:53692454-53692575 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 326-475 |
| Cow position: | chr10:53673782-53673633 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 74, 66 |
| Conread position: | 326-483 |
| Cow position: | chr10:53693057-53693214 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 482-589 |
| Cow position: | chr10:53693866-53693973 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 588-799 |
| Cow position: | chr10:53671227-53671016 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 100, 89 |
| Conread position: | 588-799 |
| Cow position: | chr10:53694703-53694914 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 794-988 |
| Cow position: | chr10:53697413-53697607 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 797-988 |
| Cow position: | chr10:53669416-53669225 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 983-1533 |
| Cow position: | chr10:53698765-53699324 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 343 |
| Conread position: | 1564-1694 |
| Cow position: | chr10:64156278-64156412 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1536-1676 |
| Cow position: | chr12:8493786-8493929 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1534-1706 |
| Cow position: | chr14:45730984-45731169 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1540-1698 |
| Cow position: | chr14:28754918-28755088 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1566-1692 |
| Cow position: | chr15:36110278-36110408 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1561-1708 |
| Cow position: | chr17:33985116-33985270 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 30, 74 |
| Conread position: | 588-799 |
| Cow position: | chr18:55167614-55167400 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 1536-1694 |
| Cow position: | chr2:10161378-10161209 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1543-1708 |
| Cow position: | chr20:33191228-33191061 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 10, 51 |
| Conread position: | 1564-1701 |
| Cow position: | chr20:23999324-23999183 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1542-1687 |
| Cow position: | chr22:6438268-6438120 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 1564-1723 |
| Cow position: | chr23:4634419-4634257 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 74, 156 |
| Conread position: | 1561-1701 |
| Cow position: | chr25:13799909-13799763 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1562-1708 |
| Cow position: | chr3:14039032-14038882 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 99 |
| Conread position: | 1545-1717 |
| Cow position: | chr4:29119695-29119518 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 169 |
| Conread position: | 1561-1701 |
| Cow position: | chr4:60833733-60833590 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 88 |
| Conread position: | 1563-1718 |
| Cow position: | chr5:47767665-47767825 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1564-1701 |
| Cow position: | chr6:63029097-63028955 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1536-1676 |
| Cow position: | chr7:40909991-40909849 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1536-1693 |
| Cow position: | chrX:31465637-31465803 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 0 |