Cow genome map
| Conread name: | Ss1.1-Tes1-TES01H110054.5 |
| Conread position: | 519-713 |
| Cow position: | chr1:20268157-20268350 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 177, 124 |
| Conread position: | 530-694 |
| Cow position: | chr1:57831360-57831193 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 147 |
| Conread position: | 535-693 |
| Cow position: | chr1:69700463-69700302 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 536-694 |
| Cow position: | chr1:92790127-92790289 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 533-694 |
| Cow position: | chr11:48797001-48796845 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 535-694 |
| Cow position: | chr11:72063983-72064145 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 535-694 |
| Cow position: | chr11:72070473-72070630 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 535-710 |
| Cow position: | chr11:81578202-81578373 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 16, 109 |
| Conread position: | 538-694 |
| Cow position: | chr11:34700985-34700827 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 535-694 |
| Cow position: | chr12:16999662-16999824 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 49-384 |
| Cow position: | chr13:10805150-10804819 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 0 |
| Conread position: | 532-707 |
| Cow position: | chr13:32191059-32191233 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 10, 113 |
| Conread position: | 567-694 |
| Cow position: | chr16:51101165-51101038 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 535-693 |
| Cow position: | chr2:55992500-55992335 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 64 |
| Conread position: | 537-694 |
| Cow position: | chr2:46045482-46045326 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 107 |
| Conread position: | 529-710 |
| Cow position: | chr21:41556771-41556593 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 115 |
| Conread position: | 532-694 |
| Cow position: | chr21:34820726-34820563 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 535-694 |
| Cow position: | chr21:26486417-26486261 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 144, 108 |
| Conread position: | 535-694 |
| Cow position: | chr21:35895141-35895301 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 535-694 |
| Cow position: | chr25:12209668-12209826 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 54 |
| Conread position: | 532-694 |
| Cow position: | chr28:13412865-13413025 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 69 |
| Conread position: | 535-692 |
| Cow position: | chr29:9124979-9125135 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 85 |
| Conread position: | 527-694 |
| Cow position: | chr3:30995832-30995995 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 52 |
| Conread position: | 530-694 |
| Cow position: | chr3:83377636-83377803 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 535-692 |
| Cow position: | chr4:2300812-2300654 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 538-710 |
| Cow position: | chr6:12084974-12084805 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 562-710 |
| Cow position: | chr7:33443053-33443196 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 76 |
| Conread position: | 549-694 |
| Cow position: | chr9:48349192-48349335 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 532-710 |
| Cow position: | chrX:39039642-39039471 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 9, 0 |