Cow genome map
| Conread name: | Ss1.1-Thy1-THY010029G07.5.5 |
| Conread position: | 997-1178 |
| Cow position: | chr13:49329154-49328973 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 6, 174 |
| Conread position: | 1263-1420 |
| Cow position: | chr13:49326688-49326530 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 1407-1545 |
| Cow position: | chr13:49326388-49326250 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1537-1733 |
| Cow position: | chr13:49325955-49325759 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 996-1177 |
| Cow position: | chr14:11717361-11717177 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 1250-1408 |
| Cow position: | chr14:11695329-11695171 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1407-1540 |
| Cow position: | chr14:11692945-11692812 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1536-1738 |
| Cow position: | chr14:11683700-11683498 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-93 |
| Cow position: | chr2:73535534-73535626 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 123-208 |
| Cow position: | chr2:73535542-73535627 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 205-317 |
| Cow position: | chr2:73548070-73548182 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-406 |
| Cow position: | chr2:73548488-73548582 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 398-491 |
| Cow position: | chr2:73548725-73548818 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-592 |
| Cow position: | chr2:73549035-73549136 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 590-694 |
| Cow position: | chr2:73549288-73549392 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 693-843 |
| Cow position: | chr2:73549573-73549723 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 139 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 844-997 |
| Cow position: | chr2:73550028-73550181 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 144 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 996-1177 |
| Cow position: | chr2:73550332-73550513 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1005-1169 |
| Cow position: | chr2:78935574-78935738 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1176-1253 |
| Cow position: | chr2:73552839-73552916 (view UCSC Genome Browser custom track) |
| Alignm length: | 78 |
| Alignm identity: | 73 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1251-1408 |
| Cow position: | chr2:73553005-73553162 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 146 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1407-1540 |
| Cow position: | chr2:73553243-73553376 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 124 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1407-1540 |
| Cow position: | chr2:78937826-78937959 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1538-2180 |
| Cow position: | chr2:73555824-73556469 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 235 |
| Conread position: | 686-829 |
| Cow position: | chr4:44030428-44030570 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1001-1177 |
| Cow position: | chr4:44032595-44032771 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1254-1408 |
| Cow position: | chr4:44038523-44038677 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1407-1545 |
| Cow position: | chr4:44040585-44040723 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1537-1762 |
| Cow position: | chr4:44043924-44044149 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1012-1170 |
| Cow position: | chr8:2500982-2500824 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1251-1422 |
| Cow position: | chr8:2497247-2497079 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 1257-1672 |
| Cow position: | chr8:54292145-54292563 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 253 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 84, 91 |
| Conread position: | 1407-1540 |
| Cow position: | chr8:2496140-2496007 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1536-1740 |
| Cow position: | chr8:2495328-2495121 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 99, 113 |
| Conread position: | 997-1185 |
| Cow position: | chr9:19836287-19836477 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1407-1552 |
| Cow position: | chr9:19857144-19857289 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1537-1733 |
| Cow position: | chr9:19869110-19869306 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |