Cow genome map

Conread name: Ss1.1-Thy1-THY010070G10.5

Conread position: 132-786
Cow position: chr1:2000076-1999422 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 418, 405

Conread position: 145-955
Cow position: chr1:2000231-1999421 (view UCSC Genome Browser custom track)
Alignm length: 815
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 408

Conread position: 211-1034
Cow position: chr1:2000249-1999426 (view UCSC Genome Browser custom track)
Alignm length: 826
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 465, 444

Conread position: 460-1011
Cow position: chr1:2000252-1999701 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 689-1039
Cow position: chr1:2000191-1999841 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 331

Conread position: 733-1039
Cow position: chr1:2000231-1999925 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 799-1039
Cow position: chr1:2000249-2000009 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 154
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 82-966
Cow position: chr10:8996886-8996002 (view UCSC Genome Browser custom track)
Alignm length: 886
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 836, 823

Conread position: 103-610
Cow position: chr10:9010341-9009834 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 233

Conread position: 103-882
Cow position: chr10:8996781-8996002 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 109-730
Cow position: chr10:8996523-8995911 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 423, 400

Conread position: 119-539
Cow position: chr10:9031244-9031664 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 240
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 67

Conread position: 137-777
Cow position: chr10:9010475-9009835 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 119

Conread position: 141-645
Cow position: chr10:21939059-21938550 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 323
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 384, 312

Conread position: 144-832
Cow position: chr10:9010552-9009864 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 32

Conread position: 145-693
Cow position: chr10:9010383-9009835 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 522, 530

Conread position: 146-836
Cow position: chr10:21939292-21938619 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 146-895
Cow position: chr10:21939376-21938644 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 195-894
Cow position: chr10:9010585-9009886 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 27

Conread position: 207-1050
Cow position: chr10:8996845-8996003 (view UCSC Genome Browser custom track)
Alignm length: 844
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 833, 0

Conread position: 272-707
Cow position: chr10:9031229-9031664 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 78

Conread position: 312-1038
Cow position: chr10:21939378-21938668 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 154

Conread position: 314-1000
Cow position: chr10:9010550-9009864 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 320-1039
Cow position: chr10:8996900-8996181 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 355-791
Cow position: chr10:9031228-9031664 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 398-1058
Cow position: chr10:9010550-9009891 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 179

Conread position: 436-1039
Cow position: chr10:9010596-9009993 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 38

Conread position: 442-875
Cow position: chr10:9031231-9031664 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 76

Conread position: 482-1039
Cow position: chr10:21939376-21938833 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 530-894
Cow position: chr10:9031235-9031599 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 76

Conread position: 566-783
Cow position: chr10:9031672-9031890 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 142, 0

Conread position: 611-992
Cow position: chr10:9031232-9031613 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 623-1038
Cow position: chr10:8996933-8996518 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 262
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 220, 226

Conread position: 691-1039
Cow position: chr10:9031228-9031576 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 229
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 59, 73

Conread position: 103-918
Cow position: chr11:74555040-74554225 (view UCSC Genome Browser custom track)
Alignm length: 816
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 104-796
Cow position: chr11:74554871-74554179 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 150

Conread position: 146-632
Cow position: chr11:74554661-74554175 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 108

Conread position: 146-880
Cow position: chr11:74554913-74554179 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 146-1011
Cow position: chr11:74555081-74554216 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 194-1039
Cow position: chr11:74555114-74554272 (view UCSC Genome Browser custom track)
Alignm length: 850
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 9

Conread position: 301-619
Cow position: chr11:50368595-50368277 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 201
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 109, 100

Conread position: 725-1039
Cow position: chr11:50368591-50368277 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 194
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 41-864
Cow position: chr13:39984070-39984893 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 435, 442

Conread position: 41-895
Cow position: chr13:39983986-39984840 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 435, 442

Conread position: 93-698
Cow position: chr13:39984290-39984895 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 37

Conread position: 105-1039
Cow position: chr13:39983882-39984816 (view UCSC Genome Browser custom track)
Alignm length: 937
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 376

Conread position: 114-1038
Cow position: chr13:39983978-39984899 (view UCSC Genome Browser custom track)
Alignm length: 926
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 698, 28

Conread position: 132-681
Cow position: chr13:56333725-56334283 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 343
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 211, 197

Conread position: 137-498
Cow position: chr13:56292181-56291822 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 227
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 28

Conread position: 137-950
Cow position: chr13:22125111-22125924 (view UCSC Genome Browser custom track)
Alignm length: 815
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 687, 711

Conread position: 137-1040
Cow position: chr13:22124943-22125846 (view UCSC Genome Browser custom track)
Alignm length: 908
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 148

Conread position: 137-1040
Cow position: chr13:24162669-24163572 (view UCSC Genome Browser custom track)
Alignm length: 909
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 148

Conread position: 137-1050
Cow position: chr13:22124691-22125603 (view UCSC Genome Browser custom track)
Alignm length: 919
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 120

Conread position: 137-1099
Cow position: chr13:24162417-24163380 (view UCSC Genome Browser custom track)
Alignm length: 969
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 123

Conread position: 144-950
Cow position: chr13:24162844-24163650 (view UCSC Genome Browser custom track)
Alignm length: 808
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 680, 704

Conread position: 146-737
Cow position: chr13:39930587-39931176 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 552, 0

Conread position: 146-1006
Cow position: chr13:22124784-22125644 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 28

Conread position: 146-1013
Cow position: chr13:24162762-24163630 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 175

Conread position: 146-1033
Cow position: chr13:22124868-22125755 (view UCSC Genome Browser custom track)
Alignm length: 893
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 191

Conread position: 146-1034
Cow position: chr13:22125036-22125924 (view UCSC Genome Browser custom track)
Alignm length: 893
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 56

Conread position: 176-1033
Cow position: chr13:24162624-24163481 (view UCSC Genome Browser custom track)
Alignm length: 862
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 161

Conread position: 188-798
Cow position: chr13:56292380-56291774 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 179

Conread position: 217-821
Cow position: chr13:39930574-39931176 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 39

Conread position: 217-1050
Cow position: chr13:22124687-22125519 (view UCSC Genome Browser custom track)
Alignm length: 839
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 123

Conread position: 217-1050
Cow position: chr13:24162413-24163245 (view UCSC Genome Browser custom track)
Alignm length: 838
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 123

Conread position: 281-832
Cow position: chr13:56333706-56334266 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 346
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 146, 134

Conread position: 304-1038
Cow position: chr13:56292684-56291955 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 443
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 102, 173

Conread position: 304-1046
Cow position: chr13:22124690-22125431 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 401

Conread position: 304-1046
Cow position: chr13:24162416-24163157 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 401

Conread position: 311-888
Cow position: chr13:39930584-39931159 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 435

Conread position: 312-1032
Cow position: chr13:56292508-56291792 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 441
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 76, 49

Conread position: 314-864
Cow position: chr13:56292332-56291792 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 477, 132

Conread position: 354-1039
Cow position: chr13:56292718-56292038 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 407
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 152, 205

Conread position: 365-1028
Cow position: chr13:56333622-56334294 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 398
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 445, 0

Conread position: 385-989
Cow position: chr13:39930574-39931176 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 26

Conread position: 449-831
Cow position: chr13:56317339-56317711 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 236
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 21

Conread position: 469-1039
Cow position: chr13:39930574-39931144 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 277

Conread position: 515-917
Cow position: chr13:56333604-56334006 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 258
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 334, 322

Conread position: 533-921
Cow position: chr13:56317339-56317717 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 241
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 235, 18

Conread position: 585-832
Cow position: chr13:56317910-56318157 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 105, 89

Conread position: 602-863
Cow position: chr13:56292722-56292461 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 169
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 145, 209

Conread position: 602-999
Cow position: chr13:56333523-56333920 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 240
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-1068
Cow position: chr14:3128306-3127245 (view UCSC Genome Browser custom track)
Alignm length: 1068
Alignm identity: 960
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 2-663
Cow position: chr14:25836517-25837178 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 36

Conread position: 2-750
Cow position: chr14:25877125-25877873 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 40

Conread position: 2-1039
Cow position: chr14:25836097-25837134 (view UCSC Genome Browser custom track)
Alignm length: 1044
Alignm identity: 647
Alignm E-value: 0
Alignm gaps (pig, cow): 420, 415

Conread position: 28-963
Cow position: chr14:25836293-25837226 (view UCSC Genome Browser custom track)
Alignm length: 940
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 10

Conread position: 57-1000
Cow position: chr14:25876340-25877283 (view UCSC Genome Browser custom track)
Alignm length: 953
Alignm identity: 612
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 73

Conread position: 58-895
Cow position: chr14:3101230-3100398 (view UCSC Genome Browser custom track)
Alignm length: 842
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 36

Conread position: 58-1039
Cow position: chr14:3101397-3100422 (view UCSC Genome Browser custom track)
Alignm length: 987
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 58

Conread position: 90-1038
Cow position: chr14:25783569-25784514 (view UCSC Genome Browser custom track)
Alignm length: 952
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 13

Conread position: 93-803
Cow position: chr14:25794873-25794162 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 71

Conread position: 93-1039
Cow position: chr14:25859577-25860523 (view UCSC Genome Browser custom track)
Alignm length: 956
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 230

Conread position: 103-467
Cow position: chr14:3080023-3079657 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 0

Conread position: 103-543
Cow position: chr14:25860343-25860783 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 282
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 84, 59

Conread position: 103-662
Cow position: chr14:3156217-3156774 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 353
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 397, 285

Conread position: 103-704
Cow position: chr14:3156133-3156725 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 0

Conread position: 103-742
Cow position: chr14:25784251-25784884 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 377
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 552, 486

Conread position: 103-747
Cow position: chr14:25784083-25784727 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 230

Conread position: 103-831
Cow position: chr14:25783915-25784643 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 655, 648

Conread position: 103-971
Cow position: chr14:25795031-25794162 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 31

Conread position: 103-999
Cow position: chr14:25783327-25784223 (view UCSC Genome Browser custom track)
Alignm length: 899
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 146

Conread position: 103-1000
Cow position: chr14:25783663-25784560 (view UCSC Genome Browser custom track)
Alignm length: 902
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 167

Conread position: 103-1038
Cow position: chr14:25783495-25784430 (view UCSC Genome Browser custom track)
Alignm length: 936
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 103-1038
Cow position: chr14:25795199-25794263 (view UCSC Genome Browser custom track)
Alignm length: 943
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 251

Conread position: 103-1039
Cow position: chr14:680290-681226 (view UCSC Genome Browser custom track)
Alignm length: 939
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 312

Conread position: 104-778
Cow position: chr14:447573-448247 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 311

Conread position: 104-797
Cow position: chr14:3156050-3156734 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 58

Conread position: 104-1050
Cow position: chr14:3080694-3079749 (view UCSC Genome Browser custom track)
Alignm length: 949
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 551

Conread position: 105-666
Cow position: chr14:25784169-25784730 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 57

Conread position: 105-831
Cow position: chr14:25784001-25784727 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 81

Conread position: 105-927
Cow position: chr14:25794945-25794128 (view UCSC Genome Browser custom track)
Alignm length: 829
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 144

Conread position: 105-999
Cow position: chr14:25783413-25784307 (view UCSC Genome Browser custom track)
Alignm length: 900
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 58

Conread position: 105-999
Cow position: chr14:25783749-25784643 (view UCSC Genome Browser custom track)
Alignm length: 895
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 107-653
Cow position: chr14:25910738-25911278 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 52

Conread position: 118-627
Cow position: chr14:25860274-25860783 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 152

Conread position: 118-1039
Cow position: chr14:3080848-3079927 (view UCSC Genome Browser custom track)
Alignm length: 924
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 16

Conread position: 119-451
Cow position: chr14:434061-434393 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 205
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 119-788
Cow position: chr14:3061322-3060653 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 62

Conread position: 119-954
Cow position: chr14:3061490-3060655 (view UCSC Genome Browser custom track)
Alignm length: 837
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 646, 642

Conread position: 119-1000
Cow position: chr14:25859350-25860232 (view UCSC Genome Browser custom track)
Alignm length: 889
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 236

Conread position: 119-1000
Cow position: chr14:25876990-25877871 (view UCSC Genome Browser custom track)
Alignm length: 890
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 46

Conread position: 120-1005
Cow position: chr14:25894945-25895831 (view UCSC Genome Browser custom track)
Alignm length: 894
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 43

Conread position: 123-1050
Cow position: chr14:25876826-25877752 (view UCSC Genome Browser custom track)
Alignm length: 938
Alignm identity: 602
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 41

Conread position: 132-497
Cow position: chr14:25910927-25911292 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 255
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 57, 32

Conread position: 132-499
Cow position: chr14:25896050-25896415 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 138, 124

Conread position: 132-502
Cow position: chr14:25877507-25877877 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 251
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 137, 120

Conread position: 132-1033
Cow position: chr14:25895126-25896027 (view UCSC Genome Browser custom track)
Alignm length: 909
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 205

Conread position: 132-1039
Cow position: chr14:25895210-25896117 (view UCSC Genome Browser custom track)
Alignm length: 913
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 124

Conread position: 137-658
Cow position: chr14:3100820-3100290 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 328
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 444, 0

Conread position: 137-796
Cow position: chr14:3080325-3079666 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 397

Conread position: 137-965
Cow position: chr14:3155915-3156734 (view UCSC Genome Browser custom track)
Alignm length: 831
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 127

Conread position: 137-1000
Cow position: chr14:680408-681271 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 227

Conread position: 137-1000
Cow position: chr14:25836064-25836927 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 49

Conread position: 137-1011
Cow position: chr14:25859285-25860159 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 278

Conread position: 137-1011
Cow position: chr14:25876336-25877210 (view UCSC Genome Browser custom track)
Alignm length: 883
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 46

Conread position: 137-1013
Cow position: chr14:25836316-25837192 (view UCSC Genome Browser custom track)
Alignm length: 880
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 376

Conread position: 137-1039
Cow position: chr14:25836148-25837050 (view UCSC Genome Browser custom track)
Alignm length: 905
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 376

Conread position: 137-1039
Cow position: chr14:25859453-25860355 (view UCSC Genome Browser custom track)
Alignm length: 911
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 115

Conread position: 137-1039
Cow position: chr14:25876504-25877406 (view UCSC Genome Browser custom track)
Alignm length: 911
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 133

Conread position: 137-1046
Cow position: chr14:3080577-3079668 (view UCSC Genome Browser custom track)
Alignm length: 910
Alignm identity: 628
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 144-464
Cow position: chr14:3155517-3155837 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 192, 199

Conread position: 144-794
Cow position: chr14:680667-681318 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 270

Conread position: 145-703
Cow position: chr14:433835-434393 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 441, 428

Conread position: 145-1011
Cow position: chr14:25895391-25896257 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 107

Conread position: 145-1014
Cow position: chr14:25895307-25896176 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 207

Conread position: 146-547
Cow position: chr14:434004-434405 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 146-795
Cow position: chr14:25860134-25860783 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 37

Conread position: 146-894
Cow position: chr14:25895644-25896392 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 123

Conread position: 146-920
Cow position: chr14:680501-681275 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 269

Conread position: 146-964
Cow position: chr14:3080484-3079666 (view UCSC Genome Browser custom track)
Alignm length: 821
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 22

Conread position: 146-999
Cow position: chr14:3061715-3060862 (view UCSC Genome Browser custom track)
Alignm length: 857
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 276

Conread position: 146-1000
Cow position: chr14:3101226-3100377 (view UCSC Genome Browser custom track)
Alignm length: 857
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 133

Conread position: 146-1000
Cow position: chr14:3155435-3156274 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 0

Conread position: 146-1005
Cow position: chr14:3061631-3060772 (view UCSC Genome Browser custom track)
Alignm length: 860
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 146-1005
Cow position: chr14:25895560-25896417 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 206

Conread position: 146-1031
Cow position: chr14:25895476-25896361 (view UCSC Genome Browser custom track)
Alignm length: 894
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 18

Conread position: 146-1038
Cow position: chr14:25795240-25794348 (view UCSC Genome Browser custom track)
Alignm length: 898
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 177

Conread position: 146-1038
Cow position: chr14:25859882-25860774 (view UCSC Genome Browser custom track)
Alignm length: 900
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 27

Conread position: 146-1038
Cow position: chr14:25876933-25877825 (view UCSC Genome Browser custom track)
Alignm length: 900
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 33

Conread position: 146-1039
Cow position: chr14:3061547-3060654 (view UCSC Genome Browser custom track)
Alignm length: 897
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 544, 534

Conread position: 146-1039
Cow position: chr14:3080736-3079843 (view UCSC Genome Browser custom track)
Alignm length: 894
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 146-1050
Cow position: chr14:3080988-3080085 (view UCSC Genome Browser custom track)
Alignm length: 908
Alignm identity: 603
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 146-1050
Cow position: chr14:25895056-25895959 (view UCSC Genome Browser custom track)
Alignm length: 907
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 704, 711

Conread position: 152-789
Cow position: chr14:3100971-3100338 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 24

Conread position: 152-1039
Cow position: chr14:25835911-25836798 (view UCSC Genome Browser custom track)
Alignm length: 892
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 34

Conread position: 155-1039
Cow position: chr14:3061790-3060906 (view UCSC Genome Browser custom track)
Alignm length: 886
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 725, 718

Conread position: 157-882
Cow position: chr14:447542-448269 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 685, 691

Conread position: 177-619
Cow position: chr14:433951-434393 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 177-1039
Cow position: chr14:3080873-3080011 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 93

Conread position: 184-1039
Cow position: chr14:25795454-25794599 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 147

Conread position: 185-460
Cow position: chr14:420626-420901 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 237, 11

Conread position: 185-579
Cow position: chr14:25910896-25911290 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 261
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 93, 75

Conread position: 185-1000
Cow position: chr14:25783325-25784140 (view UCSC Genome Browser custom track)
Alignm length: 818
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 99

Conread position: 193-1047
Cow position: chr14:680210-681065 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 91

Conread position: 195-749
Cow position: chr14:25910742-25911292 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 48

Conread position: 195-999
Cow position: chr14:25783923-25784727 (view UCSC Genome Browser custom track)
Alignm length: 808
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 61

Conread position: 195-1003
Cow position: chr14:25876226-25877034 (view UCSC Genome Browser custom track)
Alignm length: 816
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 52

Conread position: 195-1011
Cow position: chr14:25859259-25860075 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 72

Conread position: 196-1014
Cow position: chr14:25795274-25794456 (view UCSC Genome Browser custom track)
Alignm length: 821
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 227

Conread position: 202-630
Cow position: chr14:3155407-3155835 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 211

Conread position: 205-1050
Cow position: chr14:25894947-25895791 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 118

Conread position: 206-1000
Cow position: chr14:25836049-25836843 (view UCSC Genome Browser custom track)
Alignm length: 798
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 146

Conread position: 206-1039
Cow position: chr14:3155900-3156724 (view UCSC Genome Browser custom track)
Alignm length: 836
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 207

Conread position: 208-799
Cow position: chr14:433814-434405 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 62

Conread position: 224-1000
Cow position: chr14:25835647-25836423 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 45

Conread position: 269-955
Cow position: chr14:447570-448256 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 247

Conread position: 275-865
Cow position: chr14:3155885-3156475 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 278-1003
Cow position: chr14:25859258-25859983 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 60

Conread position: 285-1050
Cow position: chr14:3155406-3156155 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 635, 432

Conread position: 287-883
Cow position: chr14:433809-434405 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 287-1050
Cow position: chr14:3061742-3060980 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 474, 482

Conread position: 296-1038
Cow position: chr14:25783352-25784094 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 129

Conread position: 308-1031
Cow position: chr14:25835647-25836370 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 46

Conread position: 310-1039
Cow position: chr14:25910361-25911078 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 79

Conread position: 311-630
Cow position: chr14:420584-420901 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 205
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 43

Conread position: 311-1073
Cow position: chr14:3080991-3080230 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 333-957
Cow position: chr14:3155859-3156483 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 21

Conread position: 338-1014
Cow position: chr14:25894832-25895504 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 528, 11

Conread position: 344-961
Cow position: chr14:433782-434400 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 23

Conread position: 348-1038
Cow position: chr14:447565-448255 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 662, 674

Conread position: 351-1038
Cow position: chr14:3101440-3100759 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 114

Conread position: 351-1055
Cow position: chr14:3081036-3080332 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 13

Conread position: 352-999
Cow position: chr14:25795454-25794807 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 479, 490

Conread position: 361-999
Cow position: chr14:25876224-25876862 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 43

Conread position: 369-1039
Cow position: chr14:3155406-3156061 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 482, 432

Conread position: 371-1046
Cow position: chr14:25910338-25911001 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 389
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 144, 111

Conread position: 379-1057
Cow position: chr14:447512-448189 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 491

Conread position: 425-972
Cow position: chr14:25783313-25783860 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 436-719
Cow position: chr14:420625-420906 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 225, 10

Conread position: 440-1039
Cow position: chr14:3155882-3156481 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 409

Conread position: 446-993
Cow position: chr14:25859174-25859721 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 336
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 399, 408

Conread position: 449-1000
Cow position: chr14:25910744-25911291 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 46

Conread position: 450-1039
Cow position: chr14:25835705-25836294 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 360
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 59, 86

Conread position: 461-1046
Cow position: chr14:433815-434400 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 533-800
Cow position: chr14:420636-420903 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 221, 207

Conread position: 535-1073
Cow position: chr14:433804-434342 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 506

Conread position: 579-999
Cow position: chr14:25783297-25783719 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 273
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 17, 172

Conread position: 604-1026
Cow position: chr14:680203-680625 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 93

Conread position: 611-884
Cow position: chr14:420630-420903 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 59

Conread position: 613-1050
Cow position: chr14:25859173-25859609 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 282
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 149, 156

Conread position: 614-1050
Cow position: chr14:25876225-25876660 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 284
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 81, 53

Conread position: 627-1039
Cow position: chr14:3155331-3155740 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 33

Conread position: 647-981
Cow position: chr14:420584-420916 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 219
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 266, 52

Conread position: 680-1038
Cow position: chr14:3155870-3156228 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 680-1038
Cow position: chr14:25783316-25783674 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 223
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 689-1040
Cow position: chr14:3101438-3101088 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 232
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 76, 64

Conread position: 701-1000
Cow position: chr14:663410-663111 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 189
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 133, 140

Conread position: 773-999
Cow position: chr14:420626-420850 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 9

Conread position: 137-612
Cow position: chr15:19139139-19138664 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 290
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 210, 200

Conread position: 206-633
Cow position: chr15:19139154-19138727 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 263
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 229-955
Cow position: chr15:19139385-19138657 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 430
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 6, 143

Conread position: 304-1034
Cow position: chr15:19139392-19138662 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 436
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 162, 150

Conread position: 386-1039
Cow position: chr15:19139394-19138741 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 383
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 164, 146

Conread position: 3-636
Cow position: chr16:14627366-14626733 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 32

Conread position: 7-724
Cow position: chr16:14627443-14626729 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 102-888
Cow position: chr16:14627519-14626733 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 103-972
Cow position: chr16:14627602-14626733 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 87

Conread position: 105-1038
Cow position: chr16:14627852-14626919 (view UCSC Genome Browser custom track)
Alignm length: 940
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 160

Conread position: 146-1011
Cow position: chr16:14627643-14626778 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 86

Conread position: 197-1039
Cow position: chr16:14627844-14627002 (view UCSC Genome Browser custom track)
Alignm length: 847
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 235

Conread position: 317-1000
Cow position: chr16:14627976-14627293 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 98

Conread position: 534-1058
Cow position: chr16:14627927-14627404 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 325
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 410, 401

Conread position: 1-999
Cow position: chr17:22590305-22589307 (view UCSC Genome Browser custom track)
Alignm length: 1006
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 34

Conread position: 28-569
Cow position: chr17:22473412-22473952 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 336
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 141, 10

Conread position: 39-820
Cow position: chr17:22552262-22551480 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 218

Conread position: 41-804
Cow position: chr17:22499306-22498543 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 40

Conread position: 56-896
Cow position: chr17:22499375-22498535 (view UCSC Genome Browser custom track)
Alignm length: 842
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 278

Conread position: 74-1000
Cow position: chr17:22590148-22589222 (view UCSC Genome Browser custom track)
Alignm length: 933
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 33

Conread position: 103-743
Cow position: chr17:22452314-22451674 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 49

Conread position: 103-822
Cow position: chr17:22452398-22451679 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 133

Conread position: 103-894
Cow position: chr17:22552281-22551490 (view UCSC Genome Browser custom track)
Alignm length: 794
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 569, 563

Conread position: 103-1032
Cow position: chr17:22552953-22552024 (view UCSC Genome Browser custom track)
Alignm length: 930
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 103-1038
Cow position: chr17:22553121-22552186 (view UCSC Genome Browser custom track)
Alignm length: 938
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 480, 495

Conread position: 103-1059
Cow position: chr17:22552533-22551578 (view UCSC Genome Browser custom track)
Alignm length: 961
Alignm identity: 625
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 161

Conread position: 104-774
Cow position: chr17:22452229-22451561 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 219

Conread position: 119-884
Cow position: chr17:41440956-41440191 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 151

Conread position: 132-992
Cow position: chr17:22452538-22451677 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 9

Conread position: 137-552
Cow position: chr17:41440602-41440187 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 397

Conread position: 137-667
Cow position: chr17:22473435-22473966 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 129

Conread position: 137-803
Cow position: chr17:22473267-22473934 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 65

Conread position: 137-971
Cow position: chr17:44467539-44468375 (view UCSC Genome Browser custom track)
Alignm length: 838
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 286

Conread position: 137-1039
Cow position: chr17:22553003-22552101 (view UCSC Genome Browser custom track)
Alignm length: 904
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 876, 889

Conread position: 141-972
Cow position: chr17:22552327-22551496 (view UCSC Genome Browser custom track)
Alignm length: 833
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 693, 708

Conread position: 141-972
Cow position: chr17:22552747-22551916 (view UCSC Genome Browser custom track)
Alignm length: 835
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 31

Conread position: 146-737
Cow position: chr17:22473360-22473952 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 105

Conread position: 146-972
Cow position: chr17:22499369-22498543 (view UCSC Genome Browser custom track)
Alignm length: 830
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 449, 426

Conread position: 146-972
Cow position: chr17:41441013-41440187 (view UCSC Genome Browser custom track)
Alignm length: 828
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 337

Conread position: 146-1000
Cow position: chr17:22552406-22551552 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 441, 460

Conread position: 146-1000
Cow position: chr17:44467466-44468320 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 146-1034
Cow position: chr17:22552658-22551770 (view UCSC Genome Browser custom track)
Alignm length: 890
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 688, 703

Conread position: 146-1039
Cow position: chr17:22552574-22551681 (view UCSC Genome Browser custom track)
Alignm length: 896
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 110

Conread position: 146-1039
Cow position: chr17:41441097-41440204 (view UCSC Genome Browser custom track)
Alignm length: 894
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 174-912
Cow position: chr17:22452411-22451673 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 179-999
Cow position: chr17:22590295-22589475 (view UCSC Genome Browser custom track)
Alignm length: 826
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 141

Conread position: 206-1000
Cow position: chr17:44467357-44468152 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 216

Conread position: 206-1039
Cow position: chr17:22499393-22498560 (view UCSC Genome Browser custom track)
Alignm length: 835
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 628, 636

Conread position: 206-1057
Cow position: chr17:44467442-44468292 (view UCSC Genome Browser custom track)
Alignm length: 857
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 126

Conread position: 209-1011
Cow position: chr17:41441118-41440316 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 207

Conread position: 258-1039
Cow position: chr17:22553134-22552353 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 591, 587

Conread position: 285-999
Cow position: chr17:22499398-22498684 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 643, 628

Conread position: 305-916
Cow position: chr17:22473351-22473963 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 282

Conread position: 342-1005
Cow position: chr17:22452411-22451748 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 365-1039
Cow position: chr17:44467433-44468107 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 410, 385

Conread position: 369-1000
Cow position: chr17:22499398-22498767 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 497, 507

Conread position: 428-1039
Cow position: chr17:22473306-22473917 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 585, 598

Conread position: 454-1038
Cow position: chr17:22499395-22498813 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 461-1039
Cow position: chr17:41441118-41440540 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 255

Conread position: 511-1038
Cow position: chr17:22452410-22451883 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 144

Conread position: 530-995
Cow position: chr17:22473243-22473705 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 532-1000
Cow position: chr17:22473164-22473626 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 289
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 537-1032
Cow position: chr17:22499398-22498903 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 564-1039
Cow position: chr17:22473112-22473581 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 282
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 36

Conread position: 594-1032
Cow position: chr17:22452411-22451973 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 280
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 158, 146

Conread position: 638-1000
Cow position: chr17:22553174-22552812 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 231
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 27, 32

Conread position: 688-1039
Cow position: chr17:22452401-22452050 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 231
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 325, 334

Conread position: 713-1050
Cow position: chr17:41441118-41440782 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 227
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 327, 0

Conread position: 729-1034
Cow position: chr17:22553167-22552862 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 191
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 154, 159

Conread position: 731-1011
Cow position: chr17:44467379-44467659 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 181
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-643
Cow position: chr18:43175138-43174496 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 1-887
Cow position: chr18:42792022-42792908 (view UCSC Genome Browser custom track)
Alignm length: 891
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 30

Conread position: 1-915
Cow position: chr18:41197793-41198707 (view UCSC Genome Browser custom track)
Alignm length: 920
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 1-999
Cow position: chr18:52427514-52428513 (view UCSC Genome Browser custom track)
Alignm length: 1006
Alignm identity: 622
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 35

Conread position: 1-1038
Cow position: chr18:52432863-52433901 (view UCSC Genome Browser custom track)
Alignm length: 1042
Alignm identity: 638
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 35

Conread position: 2-677
Cow position: chr18:50848806-50849481 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 33

Conread position: 2-683
Cow position: chr18:52447747-52448428 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 33

Conread position: 2-712
Cow position: chr18:42744498-42743788 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 184

Conread position: 2-729
Cow position: chr18:51400499-51401226 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 33

Conread position: 2-736
Cow position: chr18:51752200-51751470 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 439
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 47, 33

Conread position: 2-747
Cow position: chr18:54979947-54980690 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 33

Conread position: 2-782
Cow position: chr18:42837885-42837106 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 33

Conread position: 2-824
Cow position: chr18:51789590-51788768 (view UCSC Genome Browser custom track)
Alignm length: 827
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 33

Conread position: 2-826
Cow position: chr18:52447579-52448404 (view UCSC Genome Browser custom track)
Alignm length: 828
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 33

Conread position: 2-831
Cow position: chr18:51812749-51811920 (view UCSC Genome Browser custom track)
Alignm length: 832
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 33

Conread position: 2-835
Cow position: chr18:49032911-49032078 (view UCSC Genome Browser custom track)
Alignm length: 837
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 33

Conread position: 2-880
Cow position: chr18:44398388-44397510 (view UCSC Genome Browser custom track)
Alignm length: 886
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 33

Conread position: 2-893
Cow position: chr18:52447495-52448387 (view UCSC Genome Browser custom track)
Alignm length: 897
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 32

Conread position: 2-895
Cow position: chr18:44253840-44252961 (view UCSC Genome Browser custom track)
Alignm length: 899
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 33

Conread position: 2-966
Cow position: chr18:42791939-42792903 (view UCSC Genome Browser custom track)
Alignm length: 970
Alignm identity: 612
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 36

Conread position: 2-978
Cow position: chr18:52428020-52428996 (view UCSC Genome Browser custom track)
Alignm length: 985
Alignm identity: 618
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 33

Conread position: 2-999
Cow position: chr18:51839090-51838084 (view UCSC Genome Browser custom track)
Alignm length: 1024
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 36

Conread position: 2-1038
Cow position: chr18:42791267-42792303 (view UCSC Genome Browser custom track)
Alignm length: 1042
Alignm identity: 622
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 33

Conread position: 2-1038
Cow position: chr18:52433117-52434153 (view UCSC Genome Browser custom track)
Alignm length: 1042
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 31

Conread position: 3-712
Cow position: chr18:51765610-51764901 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 32

Conread position: 6-1000
Cow position: chr18:41197630-41198624 (view UCSC Genome Browser custom track)
Alignm length: 1001
Alignm identity: 625
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 29

Conread position: 8-637
Cow position: chr18:55018273-55018901 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 375
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 52, 27

Conread position: 8-993
Cow position: chr18:54992961-54993944 (view UCSC Genome Browser custom track)
Alignm length: 998
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 16-999
Cow position: chr18:51368285-51367303 (view UCSC Genome Browser custom track)
Alignm length: 987
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 19

Conread position: 28-496
Cow position: chr18:50246324-50246790 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 294
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 149, 10

Conread position: 38-537
Cow position: chr18:49022816-49023316 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 317
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 11, 44

Conread position: 38-1039
Cow position: chr18:33064600-33063598 (view UCSC Genome Browser custom track)
Alignm length: 1006
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 11

Conread position: 38-1039
Cow position: chr18:42791218-42792220 (view UCSC Genome Browser custom track)
Alignm length: 1006
Alignm identity: 615
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 11

Conread position: 39-956
Cow position: chr18:43022900-43021982 (view UCSC Genome Browser custom track)
Alignm length: 923
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 40-384
Cow position: chr18:14453199-14452855 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 211
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 220, 229

Conread position: 40-803
Cow position: chr18:44154026-44153284 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 452
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 473, 41

Conread position: 40-862
Cow position: chr18:42744628-42743806 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 314

Conread position: 41-579
Cow position: chr18:43093328-43092791 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 322
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 304, 297

Conread position: 41-918
Cow position: chr18:44184880-44184003 (view UCSC Genome Browser custom track)
Alignm length: 883
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 209

Conread position: 41-999
Cow position: chr18:51765908-51764950 (view UCSC Genome Browser custom track)
Alignm length: 962
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 172

Conread position: 41-1038
Cow position: chr18:52447282-52448279 (view UCSC Genome Browser custom track)
Alignm length: 1002
Alignm identity: 645
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 53

Conread position: 52-863
Cow position: chr18:56493689-56494503 (view UCSC Genome Browser custom track)
Alignm length: 818
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 53

Conread position: 55-804
Cow position: chr18:43175252-43174503 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 131

Conread position: 55-999
Cow position: chr18:42790984-42791928 (view UCSC Genome Browser custom track)
Alignm length: 951
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 106

Conread position: 56-723
Cow position: chr18:42792245-42792912 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 202

Conread position: 56-917
Cow position: chr18:44154262-44153420 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 119

Conread position: 56-1039
Cow position: chr18:50848440-50849423 (view UCSC Genome Browser custom track)
Alignm length: 989
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 23

Conread position: 57-475
Cow position: chr18:55066752-55066334 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 258
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 44

Conread position: 57-885
Cow position: chr18:50099501-50100329 (view UCSC Genome Browser custom track)
Alignm length: 833
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 77

Conread position: 57-1001
Cow position: chr18:42675467-42674523 (view UCSC Genome Browser custom track)
Alignm length: 947
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 133

Conread position: 59-831
Cow position: chr18:43093646-43092874 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 111

Conread position: 59-999
Cow position: chr18:41197599-41198539 (view UCSC Genome Browser custom track)
Alignm length: 943
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 364

Conread position: 61-1038
Cow position: chr18:51765972-51764995 (view UCSC Genome Browser custom track)
Alignm length: 981
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 120

Conread position: 64-695
Cow position: chr18:55008754-55009385 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 385
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 15, 37

Conread position: 66-630
Cow position: chr18:40075137-40075702 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 144

Conread position: 66-755
Cow position: chr18:50848785-50849475 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 278

Conread position: 74-885
Cow position: chr18:56316256-56317067 (view UCSC Genome Browser custom track)
Alignm length: 816
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 163

Conread position: 75-837
Cow position: chr18:50049012-50048259 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 7

Conread position: 81-1038
Cow position: chr18:40325000-40324049 (view UCSC Genome Browser custom track)
Alignm length: 958
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 83-663
Cow position: chr18:42827368-42827953 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 0

Conread position: 84-819
Cow position: chr18:52433451-52434185 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 239

Conread position: 84-1038
Cow position: chr18:52428018-52428972 (view UCSC Genome Browser custom track)
Alignm length: 957
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 239

Conread position: 88-468
Cow position: chr18:14453234-14452855 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 245
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 78, 5

Conread position: 93-625
Cow position: chr18:42837626-42837094 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 93

Conread position: 93-632
Cow position: chr18:44184492-44183953 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 159

Conread position: 93-713
Cow position: chr18:43022593-43021973 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 85

Conread position: 93-730
Cow position: chr18:42675011-42674372 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 71

Conread position: 93-797
Cow position: chr18:44184660-44183956 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 103

Conread position: 95-881
Cow position: chr18:44184742-44183956 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 241

Conread position: 95-1000
Cow position: chr18:50099119-50100024 (view UCSC Genome Browser custom track)
Alignm length: 916
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 24

Conread position: 98-765
Cow position: chr18:43120176-43119509 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 98-978
Cow position: chr18:52433297-52434177 (view UCSC Genome Browser custom track)
Alignm length: 884
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 88

Conread position: 98-1038
Cow position: chr18:42985581-42984641 (view UCSC Genome Browser custom track)
Alignm length: 950
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 65

Conread position: 98-1038
Cow position: chr18:52427780-52428720 (view UCSC Genome Browser custom track)
Alignm length: 944
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 88

Conread position: 98-1038
Cow position: chr18:52427948-52428888 (view UCSC Genome Browser custom track)
Alignm length: 943
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 166

Conread position: 98-1038
Cow position: chr18:52433129-52434069 (view UCSC Genome Browser custom track)
Alignm length: 943
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 88

Conread position: 99-1038
Cow position: chr18:52447004-52447943 (view UCSC Genome Browser custom track)
Alignm length: 944
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 87

Conread position: 100-799
Cow position: chr18:14454039-14453340 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 158

Conread position: 102-1038
Cow position: chr18:43023088-43022152 (view UCSC Genome Browser custom track)
Alignm length: 943
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 151

Conread position: 103-585
Cow position: chr18:51874208-51874690 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 285
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 247, 230

Conread position: 103-623
Cow position: chr18:44240329-44240849 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 326
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 70, 61

Conread position: 103-635
Cow position: chr18:1418070-1418602 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 69

Conread position: 103-662
Cow position: chr18:43120003-43119445 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 411, 406

Conread position: 103-665
Cow position: chr18:40324480-40323919 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 353
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 83

Conread position: 103-665
Cow position: chr18:51812480-51811918 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 103-677
Cow position: chr18:41198231-41198801 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 319

Conread position: 103-707
Cow position: chr18:42985072-42984468 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 162

Conread position: 103-727
Cow position: chr18:14453952-14453325 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 583, 577

Conread position: 103-742
Cow position: chr18:51969409-51970037 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 150

Conread position: 103-747
Cow position: chr18:56434281-56434924 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 389
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 232, 220

Conread position: 103-749
Cow position: chr18:51789321-51788675 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 103-765
Cow position: chr18:42960063-42959410 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 65

Conread position: 103-786
Cow position: chr18:43093518-43092835 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 153

Conread position: 103-802
Cow position: chr18:33093038-33092345 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 151

Conread position: 103-824
Cow position: chr18:51812732-51812011 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 103-832
Cow position: chr18:51789405-51788676 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 78

Conread position: 103-863
Cow position: chr18:50246061-50246821 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 70

Conread position: 103-877
Cow position: chr18:42837868-42837094 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 61

Conread position: 103-880
Cow position: chr18:50059135-50058360 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 404

Conread position: 103-885
Cow position: chr18:40324732-40323950 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 30

Conread position: 103-888
Cow position: chr18:33064366-33063581 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 167

Conread position: 103-895
Cow position: chr18:51752267-51751479 (view UCSC Genome Browser custom track)
Alignm length: 797
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 166

Conread position: 103-896
Cow position: chr18:43175288-43174495 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 251

Conread position: 103-917
Cow position: chr18:51368534-51367721 (view UCSC Genome Browser custom track)
Alignm length: 816
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 78

Conread position: 103-921
Cow position: chr18:51368030-51367213 (view UCSC Genome Browser custom track)
Alignm length: 824
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 153

Conread position: 103-933
Cow position: chr18:43120339-43119509 (view UCSC Genome Browser custom track)
Alignm length: 833
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 67

Conread position: 103-956
Cow position: chr18:42675253-42674400 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 103-956
Cow position: chr18:42985324-42984471 (view UCSC Genome Browser custom track)
Alignm length: 860
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 83

Conread position: 103-957
Cow position: chr18:42744649-42743795 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 103-964
Cow position: chr18:44398371-44397510 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 151

Conread position: 103-969
Cow position: chr18:52012375-52011506 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 411

Conread position: 103-971
Cow position: chr18:41949196-41948328 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 251

Conread position: 103-975
Cow position: chr18:51789573-51788701 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 227

Conread position: 103-996
Cow position: chr18:44154299-44153425 (view UCSC Genome Browser custom track)
Alignm length: 896
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 314

Conread position: 103-999
Cow position: chr18:41949280-41948384 (view UCSC Genome Browser custom track)
Alignm length: 900
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 147

Conread position: 103-999
Cow position: chr18:42960315-42959428 (view UCSC Genome Browser custom track)
Alignm length: 901
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 231

Conread position: 103-1000
Cow position: chr18:42790948-42791845 (view UCSC Genome Browser custom track)
Alignm length: 902
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 220

Conread position: 103-1000
Cow position: chr18:50083350-50084247 (view UCSC Genome Browser custom track)
Alignm length: 903
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 69

Conread position: 103-1000
Cow position: chr18:50099295-50100192 (view UCSC Genome Browser custom track)
Alignm length: 903
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 71

Conread position: 103-1009
Cow position: chr18:49021635-49022530 (view UCSC Genome Browser custom track)
Alignm length: 909
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 251

Conread position: 103-1031
Cow position: chr18:42791872-42792800 (view UCSC Genome Browser custom track)
Alignm length: 931
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 80

Conread position: 103-1038
Cow position: chr18:33064618-33063683 (view UCSC Genome Browser custom track)
Alignm length: 943
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 419

Conread position: 103-1038
Cow position: chr18:33064786-33063851 (view UCSC Genome Browser custom track)
Alignm length: 942
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 480, 491

Conread position: 103-1038
Cow position: chr18:42675337-42674402 (view UCSC Genome Browser custom track)
Alignm length: 939
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 151

Conread position: 103-1038
Cow position: chr18:42791200-42792135 (view UCSC Genome Browser custom track)
Alignm length: 941
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 240

Conread position: 103-1038
Cow position: chr18:42791704-42792639 (view UCSC Genome Browser custom track)
Alignm length: 941
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 249

Conread position: 103-1038
Cow position: chr18:42985408-42984473 (view UCSC Genome Browser custom track)
Alignm length: 941
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 66

Conread position: 103-1038
Cow position: chr18:43022919-43021984 (view UCSC Genome Browser custom track)
Alignm length: 940
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 251

Conread position: 103-1038
Cow position: chr18:43175456-43174521 (view UCSC Genome Browser custom track)
Alignm length: 943
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 320

Conread position: 103-1038
Cow position: chr18:44239909-44240844 (view UCSC Genome Browser custom track)
Alignm length: 942
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 83

Conread position: 103-1038
Cow position: chr18:51766014-51765079 (view UCSC Genome Browser custom track)
Alignm length: 942
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 231

Conread position: 103-1056
Cow position: chr18:52447092-52448044 (view UCSC Genome Browser custom track)
Alignm length: 955
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 103-1057
Cow position: chr18:44184902-44183950 (view UCSC Genome Browser custom track)
Alignm length: 959
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 147

Conread position: 104-491
Cow position: chr18:1418239-1418628 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 245
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 375, 0

Conread position: 104-558
Cow position: chr18:55523881-55524335 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 288
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 11, 29

Conread position: 104-632
Cow position: chr18:50281827-50282355 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 325
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 304, 321

Conread position: 104-635
Cow position: chr18:44398034-44397503 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 408, 402

Conread position: 104-697
Cow position: chr18:49032641-49032048 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 408

Conread position: 104-726
Cow position: chr18:55066957-55066335 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 104-774
Cow position: chr18:53560163-53560829 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 611, 0

Conread position: 104-779
Cow position: chr18:55067041-55066366 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 104-780
Cow position: chr18:49032725-49032049 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 30

Conread position: 104-865
Cow position: chr18:50048902-50048147 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 449
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 155, 143

Conread position: 104-920
Cow position: chr18:54967689-54968503 (view UCSC Genome Browser custom track)
Alignm length: 826
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 66

Conread position: 104-922
Cow position: chr18:50848656-50849474 (view UCSC Genome Browser custom track)
Alignm length: 821
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 162

Conread position: 104-968
Cow position: chr18:42724771-42723907 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 36

Conread position: 104-1000
Cow position: chr18:49032977-49032081 (view UCSC Genome Browser custom track)
Alignm length: 899
Alignm identity: 603
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 104-1000
Cow position: chr18:50848404-50849300 (view UCSC Genome Browser custom track)
Alignm length: 901
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 65

Conread position: 104-1031
Cow position: chr18:52447429-52448357 (view UCSC Genome Browser custom track)
Alignm length: 932
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 152

Conread position: 104-1039
Cow position: chr18:49033313-49032378 (view UCSC Genome Browser custom track)
Alignm length: 937
Alignm identity: 622
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 405

Conread position: 104-1039
Cow position: chr18:50848236-50849171 (view UCSC Genome Browser custom track)
Alignm length: 939
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 68

Conread position: 104-1039
Cow position: chr18:53587014-53586079 (view UCSC Genome Browser custom track)
Alignm length: 939
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 479, 493

Conread position: 104-1040
Cow position: chr18:53586930-53585994 (view UCSC Genome Browser custom track)
Alignm length: 943
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 166

Conread position: 105-711
Cow position: chr18:1417988-1418594 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 105-1008
Cow position: chr18:41197561-41198464 (view UCSC Genome Browser custom track)
Alignm length: 905
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 404

Conread position: 105-1014
Cow position: chr18:42791622-42792531 (view UCSC Genome Browser custom track)
Alignm length: 914
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 34

Conread position: 105-1038
Cow position: chr18:51812899-51811965 (view UCSC Genome Browser custom track)
Alignm length: 935
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 105-1039
Cow position: chr18:50059721-50058787 (view UCSC Genome Browser custom track)
Alignm length: 941
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 478, 493

Conread position: 105-1039
Cow position: chr18:53587098-53586163 (view UCSC Genome Browser custom track)
Alignm length: 940
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 166

Conread position: 106-463
Cow position: chr18:40075346-40075703 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 220
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 68, 80

Conread position: 106-1004
Cow position: chr18:40324813-40323916 (view UCSC Genome Browser custom track)
Alignm length: 903
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 80

Conread position: 106-1038
Cow position: chr18:42985489-42984557 (view UCSC Genome Browser custom track)
Alignm length: 938
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 141

Conread position: 106-1038
Cow position: chr18:43093839-43092919 (view UCSC Genome Browser custom track)
Alignm length: 938
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 112

Conread position: 106-1038
Cow position: chr18:52446927-52447859 (view UCSC Genome Browser custom track)
Alignm length: 934
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 81

Conread position: 108-1038
Cow position: chr18:50848156-50849086 (view UCSC Genome Browser custom track)
Alignm length: 936
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 174

Conread position: 109-1038
Cow position: chr18:43022997-43022068 (view UCSC Genome Browser custom track)
Alignm length: 936
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 77

Conread position: 111-722
Cow position: chr18:44184558-44183947 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 305

Conread position: 111-958
Cow position: chr18:56493665-56494515 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 74

Conread position: 111-1039
Cow position: chr18:40306329-40307257 (view UCSC Genome Browser custom track)
Alignm length: 934
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 398

Conread position: 112-650
Cow position: chr18:14453292-14452756 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 324
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 294, 30

Conread position: 112-825
Cow position: chr18:51969334-51970036 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 141

Conread position: 118-800
Cow position: chr18:42724590-42723907 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 118-999
Cow position: chr18:55523391-55524271 (view UCSC Genome Browser custom track)
Alignm length: 889
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 227

Conread position: 118-1034
Cow position: chr18:56247992-56247076 (view UCSC Genome Browser custom track)
Alignm length: 933
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 97

Conread position: 118-1038
Cow position: chr18:41949349-41948429 (view UCSC Genome Browser custom track)
Alignm length: 922
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 895, 900

Conread position: 118-1049
Cow position: chr18:56316048-56316979 (view UCSC Genome Browser custom track)
Alignm length: 933
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 466, 454

Conread position: 119-665
Cow position: chr18:50246329-50246872 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 54

Conread position: 119-1038
Cow position: chr18:56329767-56328848 (view UCSC Genome Browser custom track)
Alignm length: 920
Alignm identity: 641
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 120-1032
Cow position: chr18:56248236-56247328 (view UCSC Genome Browser custom track)
Alignm length: 928
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 10

Conread position: 121-1046
Cow position: chr18:44398437-44397512 (view UCSC Genome Browser custom track)
Alignm length: 927
Alignm identity: 606
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 388

Conread position: 122-832
Cow position: chr18:51839559-51838848 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 395

Conread position: 123-1046
Cow position: chr18:42724836-42723913 (view UCSC Genome Browser custom track)
Alignm length: 932
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 214

Conread position: 124-714
Cow position: chr18:50295361-50295947 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 349
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 509, 0

Conread position: 125-748
Cow position: chr18:50022058-50021432 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 377
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 30, 44

Conread position: 125-1038
Cow position: chr18:51789635-51788722 (view UCSC Genome Browser custom track)
Alignm length: 919
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 285

Conread position: 131-911
Cow position: chr18:51400376-51401156 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 117

Conread position: 132-624
Cow position: chr18:56329334-56328842 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 122

Conread position: 132-657
Cow position: chr18:50271642-50272167 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 376

Conread position: 132-665
Cow position: chr18:51874155-51874686 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 322
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 219, 32

Conread position: 132-672
Cow position: chr18:51839380-51838840 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 132-744
Cow position: chr18:51400545-51401157 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 279

Conread position: 132-799
Cow position: chr18:53586650-53585985 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 128

Conread position: 132-1011
Cow position: chr18:51813039-51812160 (view UCSC Genome Browser custom track)
Alignm length: 887
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 42

Conread position: 132-1015
Cow position: chr18:51789880-51788997 (view UCSC Genome Browser custom track)
Alignm length: 889
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 32

Conread position: 132-1039
Cow position: chr18:56330006-56329099 (view UCSC Genome Browser custom track)
Alignm length: 909
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 450, 443

Conread position: 135-732
Cow position: chr18:53498576-53499165 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 352
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 49

Conread position: 135-789
Cow position: chr18:55008575-55009229 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 196

Conread position: 135-887
Cow position: chr18:43167808-43168558 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 267

Conread position: 135-979
Cow position: chr18:55523492-55524336 (view UCSC Genome Browser custom track)
Alignm length: 850
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 125

Conread position: 135-1000
Cow position: chr18:51789793-51788928 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 37

Conread position: 136-1003
Cow position: chr18:50083299-50084166 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 105

Conread position: 136-1045
Cow position: chr18:56316150-56317058 (view UCSC Genome Browser custom track)
Alignm length: 912
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 731, 741

Conread position: 137-561
Cow position: chr18:42792494-42792918 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 137-633
Cow position: chr18:56391329-56390833 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 198

Conread position: 137-665
Cow position: chr18:51969527-51970044 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 333
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 130, 83

Conread position: 137-682
Cow position: chr18:52433672-52434217 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 337
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 138, 113

Conread position: 137-695
Cow position: chr18:53509592-53510154 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 346
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 124, 116

Conread position: 137-726
Cow position: chr18:53586561-53585972 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 123

Conread position: 137-799
Cow position: chr18:40075041-40075703 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 35

Conread position: 137-808
Cow position: chr18:50099665-50100336 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 37

Conread position: 137-813
Cow position: chr18:1417936-1418612 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 271

Conread position: 137-825
Cow position: chr18:56433989-56434667 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 34

Conread position: 137-836
Cow position: chr18:50271479-50272177 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 108

Conread position: 137-886
Cow position: chr18:41198013-41198764 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 25

Conread position: 137-918
Cow position: chr18:33093088-33092313 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 123

Conread position: 137-992
Cow position: chr18:53610533-53609679 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 49

Conread position: 137-999
Cow position: chr18:49022414-49023274 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 64

Conread position: 137-999
Cow position: chr18:51812782-51811920 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 137-1000
Cow position: chr18:51839123-51838246 (view UCSC Genome Browser custom track)
Alignm length: 885
Alignm identity: 493
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 249, 475

Conread position: 137-1007
Cow position: chr18:50049209-50048335 (view UCSC Genome Browser custom track)
Alignm length: 882
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 187

Conread position: 137-1007
Cow position: chr18:50059269-50058401 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 768, 0

Conread position: 137-1030
Cow position: chr18:49021585-49022467 (view UCSC Genome Browser custom track)
Alignm length: 904
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 122

Conread position: 137-1038
Cow position: chr18:41197509-41198410 (view UCSC Genome Browser custom track)
Alignm length: 903
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 376

Conread position: 137-1038
Cow position: chr18:56248141-56247238 (view UCSC Genome Browser custom track)
Alignm length: 913
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 246

Conread position: 137-1039
Cow position: chr18:49022005-49022894 (view UCSC Genome Browser custom track)
Alignm length: 911
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 103

Conread position: 137-1039
Cow position: chr18:53559860-53560762 (view UCSC Genome Browser custom track)
Alignm length: 906
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 618, 628

Conread position: 137-1039
Cow position: chr18:56330085-56329183 (view UCSC Genome Browser custom track)
Alignm length: 906
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 280

Conread position: 137-1059
Cow position: chr18:33064836-33063916 (view UCSC Genome Browser custom track)
Alignm length: 924
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 117

Conread position: 139-999
Cow position: chr18:53498073-53498938 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 300

Conread position: 141-447
Cow position: chr18:50083976-50084282 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 141-489
Cow position: chr18:56494202-56494547 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 234
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 29, 44

Conread position: 141-637
Cow position: chr18:53571833-53572316 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 299
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 244, 173

Conread position: 141-674
Cow position: chr18:56128731-56129261 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 434, 397

Conread position: 141-993
Cow position: chr18:54992842-54993694 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 113

Conread position: 141-1000
Cow position: chr18:56128143-56129002 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 708, 701

Conread position: 141-1039
Cow position: chr18:42791994-42792892 (view UCSC Genome Browser custom track)
Alignm length: 900
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 704, 708

Conread position: 141-1056
Cow position: chr18:53559696-53560610 (view UCSC Genome Browser custom track)
Alignm length: 921
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 129

Conread position: 141-1057
Cow position: chr18:50059601-50058687 (view UCSC Genome Browser custom track)
Alignm length: 919
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 438, 431

Conread position: 144-452
Cow position: chr18:56267435-56267127 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 197
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 278, 271

Conread position: 144-460
Cow position: chr18:55497345-55497029 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 55, 47

Conread position: 144-1046
Cow position: chr18:49022337-49023237 (view UCSC Genome Browser custom track)
Alignm length: 910
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 262

Conread position: 145-703
Cow position: chr18:50281784-50282342 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 29

Conread position: 146-378
Cow position: chr18:56267349-56267117 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 146-550
Cow position: chr18:56316664-56317068 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 259
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 330, 335

Conread position: 146-559
Cow position: chr18:55066747-55066334 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 244
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 146-627
Cow position: chr18:43048701-43048222 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 297
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 35, 40

Conread position: 146-710
Cow position: chr18:40306784-40307348 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 272

Conread position: 146-712
Cow position: chr18:55497595-55497029 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 135

Conread position: 146-738
Cow position: chr18:55018243-55018837 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 18

Conread position: 146-744
Cow position: chr18:50021953-50021354 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 369
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 116, 101

Conread position: 146-789
Cow position: chr18:55497679-55497036 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 30

Conread position: 146-798
Cow position: chr18:50281701-50282353 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 429, 437

Conread position: 146-803
Cow position: chr18:56247702-56247057 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 121

Conread position: 146-806
Cow position: chr18:53635513-53634855 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 513, 480

Conread position: 146-809
Cow position: chr18:56128652-56129313 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 628, 480

Conread position: 146-810
Cow position: chr18:40086319-40085664 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 111

Conread position: 146-814
Cow position: chr18:55523671-55524339 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 110

Conread position: 146-821
Cow position: chr18:44154340-44153672 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 25

Conread position: 146-822
Cow position: chr18:53509349-53510023 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 205

Conread position: 146-825
Cow position: chr18:51400475-51401154 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 23

Conread position: 146-825
Cow position: chr18:55067083-55066404 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 114

Conread position: 146-831
Cow position: chr18:54966894-54967579 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 367

Conread position: 146-851
Cow position: chr18:56493871-56494575 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 124

Conread position: 146-852
Cow position: chr18:50246188-50246889 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 40

Conread position: 146-854
Cow position: chr18:50083729-50084439 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 363

Conread position: 146-866
Cow position: chr18:50295299-50296016 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 434, 445

Conread position: 146-892
Cow position: chr18:40074966-40075711 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 110

Conread position: 146-915
Cow position: chr18:50099506-50100275 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 32

Conread position: 146-915
Cow position: chr18:50246020-50246789 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 32

Conread position: 146-918
Cow position: chr18:51969288-51970045 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 47

Conread position: 146-919
Cow position: chr18:53525719-53526490 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 146-956
Cow position: chr18:42837909-42837099 (view UCSC Genome Browser custom track)
Alignm length: 813
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 118

Conread position: 146-958
Cow position: chr18:40306532-40307344 (view UCSC Genome Browser custom track)
Alignm length: 818
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 40

Conread position: 146-958
Cow position: chr18:49022507-49023317 (view UCSC Genome Browser custom track)
Alignm length: 821
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 89

Conread position: 146-964
Cow position: chr18:56329656-56328838 (view UCSC Genome Browser custom track)
Alignm length: 822
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 192

Conread position: 146-967
Cow position: chr18:53586804-53585985 (view UCSC Genome Browser custom track)
Alignm length: 823
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 281

Conread position: 146-968
Cow position: chr18:42693685-42692868 (view UCSC Genome Browser custom track)
Alignm length: 827
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 264

Conread position: 146-972
Cow position: chr18:33064407-33063581 (view UCSC Genome Browser custom track)
Alignm length: 832
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 204

Conread position: 146-988
Cow position: chr18:51400307-51401149 (view UCSC Genome Browser custom track)
Alignm length: 845
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 40

Conread position: 146-989
Cow position: chr18:42694021-42693179 (view UCSC Genome Browser custom track)
Alignm length: 846
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 277

Conread position: 146-993
Cow position: chr18:33064911-33064064 (view UCSC Genome Browser custom track)
Alignm length: 850
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 260

Conread position: 146-993
Cow position: chr18:53497999-53498849 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 18

Conread position: 146-993
Cow position: chr18:54967062-54967906 (view UCSC Genome Browser custom track)
Alignm length: 857
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 268

Conread position: 146-993
Cow position: chr18:54979419-54980266 (view UCSC Genome Browser custom track)
Alignm length: 852
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 85

Conread position: 146-993
Cow position: chr18:54992679-54993526 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 110

Conread position: 146-994
Cow position: chr18:49021093-49021938 (view UCSC Genome Browser custom track)
Alignm length: 857
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 165

Conread position: 146-994
Cow position: chr18:54967398-54968241 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 18

Conread position: 146-997
Cow position: chr18:53635849-53634999 (view UCSC Genome Browser custom track)
Alignm length: 854
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 628, 623

Conread position: 146-999
Cow position: chr18:40324857-40324004 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 26

Conread position: 146-999
Cow position: chr18:42744690-42743837 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 40

Conread position: 146-999
Cow position: chr18:50022376-50021517 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 197

Conread position: 146-1000
Cow position: chr18:43093643-43092790 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 371

Conread position: 146-1000
Cow position: chr18:50022292-50021432 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 113

Conread position: 146-1000
Cow position: chr18:50099002-50099856 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 184

Conread position: 146-1000
Cow position: chr18:50099422-50100276 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 32

Conread position: 146-1000
Cow position: chr18:50848362-50849216 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 191

Conread position: 146-1000
Cow position: chr18:53636017-53635163 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 621, 615

Conread position: 146-1001
Cow position: chr18:33064659-33063804 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 108

Conread position: 146-1001
Cow position: chr18:50059428-50058573 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 124

Conread position: 146-1015
Cow position: chr18:53559953-53560818 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 750, 757

Conread position: 146-1038
Cow position: chr18:42791159-42792051 (view UCSC Genome Browser custom track)
Alignm length: 900
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 21

Conread position: 146-1038
Cow position: chr18:44253864-44252986 (view UCSC Genome Browser custom track)
Alignm length: 899
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 188

Conread position: 146-1038
Cow position: chr18:50059512-50058620 (view UCSC Genome Browser custom track)
Alignm length: 898
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 124

Conread position: 146-1038
Cow position: chr18:53559785-53560677 (view UCSC Genome Browser custom track)
Alignm length: 895
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 720, 724

Conread position: 146-1038
Cow position: chr18:53635933-53635041 (view UCSC Genome Browser custom track)
Alignm length: 893
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 146-1038
Cow position: chr18:55017907-55018800 (view UCSC Genome Browser custom track)
Alignm length: 899
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 208

Conread position: 146-1038
Cow position: chr18:56128232-56129124 (view UCSC Genome Browser custom track)
Alignm length: 894
Alignm identity: 594
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 30

Conread position: 146-1039
Cow position: chr18:40306280-40307173 (view UCSC Genome Browser custom track)
Alignm length: 897
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 272

Conread position: 146-1039
Cow position: chr18:40306448-40307341 (view UCSC Genome Browser custom track)
Alignm length: 895
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 793, 781

Conread position: 146-1039
Cow position: chr18:43175581-43174688 (view UCSC Genome Browser custom track)
Alignm length: 898
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 208

Conread position: 146-1039
Cow position: chr18:49033355-49032462 (view UCSC Genome Browser custom track)
Alignm length: 896
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 192

Conread position: 146-1039
Cow position: chr18:54967650-54968538 (view UCSC Genome Browser custom track)
Alignm length: 899
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 27

Conread position: 146-1039
Cow position: chr18:54979587-54980480 (view UCSC Genome Browser custom track)
Alignm length: 901
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 268

Conread position: 146-1039
Cow position: chr18:54992931-54993824 (view UCSC Genome Browser custom track)
Alignm length: 902
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 108

Conread position: 146-1039
Cow position: chr18:56329824-56328931 (view UCSC Genome Browser custom track)
Alignm length: 899
Alignm identity: 625
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 192

Conread position: 146-1039
Cow position: chr18:56329908-56329015 (view UCSC Genome Browser custom track)
Alignm length: 896
Alignm identity: 621
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 371

Conread position: 146-1050
Cow position: chr18:49033103-49032200 (view UCSC Genome Browser custom track)
Alignm length: 908
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 191

Conread position: 146-1056
Cow position: chr18:40306196-40307105 (view UCSC Genome Browser custom track)
Alignm length: 911
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 894, 0

Conread position: 146-1056
Cow position: chr18:49022255-49023162 (view UCSC Genome Browser custom track)
Alignm length: 915
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 270

Conread position: 146-1058
Cow position: chr18:56128316-56129225 (view UCSC Genome Browser custom track)
Alignm length: 914
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 628, 623

Conread position: 146-1059
Cow position: chr18:55523335-55524247 (view UCSC Genome Browser custom track)
Alignm length: 916
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 32

Conread position: 146-1107
Cow position: chr18:56330160-56329201 (view UCSC Genome Browser custom track)
Alignm length: 966
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 26

Conread position: 147-863
Cow position: chr18:50295216-50295930 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 154

Conread position: 147-872
Cow position: chr18:49022590-49023317 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 459, 453

Conread position: 147-881
Cow position: chr18:1417862-1418598 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 264

Conread position: 147-999
Cow position: chr18:51368070-51367219 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 18

Conread position: 147-1001
Cow position: chr18:50098919-50099773 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 31

Conread position: 148-916
Cow position: chr18:51752387-51751622 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 59

Conread position: 148-1000
Cow position: chr18:42791581-42792433 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 262

Conread position: 148-1039
Cow position: chr18:43167653-43168544 (view UCSC Genome Browser custom track)
Alignm length: 894
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 24

Conread position: 150-798
Cow position: chr18:50031035-50030389 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 99

Conread position: 150-993
Cow position: chr18:55017746-55018586 (view UCSC Genome Browser custom track)
Alignm length: 848
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 33

Conread position: 152-499
Cow position: chr18:55442300-55442646 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 218
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 19

Conread position: 152-997
Cow position: chr18:52012410-52011565 (view UCSC Genome Browser custom track)
Alignm length: 847
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 104

Conread position: 157-717
Cow position: chr18:56391393-56390833 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 258

Conread position: 167-832
Cow position: chr18:50281639-50282303 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 10

Conread position: 172-1038
Cow position: chr18:42790935-42791799 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 8

Conread position: 173-1057
Cow position: chr18:42694162-42693279 (view UCSC Genome Browser custom track)
Alignm length: 889
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 147

Conread position: 174-993
Cow position: chr18:49032991-49032172 (view UCSC Genome Browser custom track)
Alignm length: 820
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 174-1056
Cow position: chr18:49021958-49022826 (view UCSC Genome Browser custom track)
Alignm length: 888
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 213

Conread position: 175-1039
Cow position: chr18:40086542-40085687 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 175-1047
Cow position: chr18:42694076-42693206 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 145

Conread position: 176-797
Cow position: chr18:50083675-50084297 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 609, 0

Conread position: 176-1039
Cow position: chr18:49033157-49032294 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 102

Conread position: 180-1056
Cow position: chr18:50848144-50849019 (view UCSC Genome Browser custom track)
Alignm length: 883
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 158

Conread position: 183-885
Cow position: chr18:56391535-56390833 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 479, 472

Conread position: 183-929
Cow position: chr18:53509302-53510047 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 152

Conread position: 184-546
Cow position: chr18:56267479-56267117 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 230
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 185-598
Cow position: chr18:51367613-51367200 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 261
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 106, 99

Conread position: 185-725
Cow position: chr18:54993558-54994096 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 335
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 77, 61

Conread position: 185-779
Cow position: chr18:55008793-55009385 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 362
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 151, 138

Conread position: 185-823
Cow position: chr18:54967938-54968575 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 62

Conread position: 185-831
Cow position: chr18:51874045-51874684 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 84

Conread position: 185-871
Cow position: chr18:54967854-54968540 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 69

Conread position: 185-990
Cow position: chr18:54992802-54993607 (view UCSC Genome Browser custom track)
Alignm length: 813
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 65

Conread position: 185-993
Cow position: chr18:54979542-54980350 (view UCSC Genome Browser custom track)
Alignm length: 813
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 391

Conread position: 185-999
Cow position: chr18:56434111-56434925 (view UCSC Genome Browser custom track)
Alignm length: 824
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 71

Conread position: 185-1039
Cow position: chr18:40086870-40086016 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 106

Conread position: 189-755
Cow position: chr18:42827390-42827961 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 476, 480

Conread position: 189-1038
Cow position: chr18:53636058-53635209 (view UCSC Genome Browser custom track)
Alignm length: 850
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 194-1042
Cow position: chr18:50245986-50246832 (view UCSC Genome Browser custom track)
Alignm length: 854
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 9

Conread position: 195-712
Cow position: chr18:43048736-43048221 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 376

Conread position: 195-748
Cow position: chr18:22634632-22635184 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 128

Conread position: 195-916
Cow position: chr18:51765670-51764949 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 142

Conread position: 195-990
Cow position: chr18:53509230-53510023 (view UCSC Genome Browser custom track)
Alignm length: 800
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 75

Conread position: 195-994
Cow position: chr18:44154462-44153667 (view UCSC Genome Browser custom track)
Alignm length: 804
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 225

Conread position: 195-994
Cow position: chr18:53525684-53526482 (view UCSC Genome Browser custom track)
Alignm length: 807
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 75

Conread position: 195-999
Cow position: chr18:43120331-43119527 (view UCSC Genome Browser custom track)
Alignm length: 810
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 13

Conread position: 195-999
Cow position: chr18:54979804-54980607 (view UCSC Genome Browser custom track)
Alignm length: 812
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 56

Conread position: 195-1038
Cow position: chr18:42744725-42743882 (view UCSC Genome Browser custom track)
Alignm length: 845
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 137

Conread position: 195-1038
Cow position: chr18:44239749-44240592 (view UCSC Genome Browser custom track)
Alignm length: 851
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 195

Conread position: 195-1038
Cow position: chr18:51368190-51367348 (view UCSC Genome Browser custom track)
Alignm length: 845
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 538, 382

Conread position: 195-1038
Cow position: chr18:56128113-56128956 (view UCSC Genome Browser custom track)
Alignm length: 846
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 75

Conread position: 196-1015
Cow position: chr18:53497965-53498784 (view UCSC Genome Browser custom track)
Alignm length: 827
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 48

Conread position: 196-1031
Cow position: chr18:52012449-52011615 (view UCSC Genome Browser custom track)
Alignm length: 836
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 197-967
Cow position: chr18:40074933-40075703 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 53

Conread position: 197-978
Cow position: chr18:55067116-55066335 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 197-1038
Cow position: chr18:50022409-50021562 (view UCSC Genome Browser custom track)
Alignm length: 854
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 157

Conread position: 197-1038
Cow position: chr18:51766085-51765247 (view UCSC Genome Browser custom track)
Alignm length: 848
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 10

Conread position: 198-1000
Cow position: chr18:51368608-51367806 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 708

Conread position: 198-1050
Cow position: chr18:33064943-33064092 (view UCSC Genome Browser custom track)
Alignm length: 854
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 56

Conread position: 202-883
Cow position: chr18:14454021-14453340 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 68

Conread position: 202-999
Cow position: chr18:42837937-42837140 (view UCSC Genome Browser custom track)
Alignm length: 801
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 132

Conread position: 203-999
Cow position: chr18:53636128-53635332 (view UCSC Genome Browser custom track)
Alignm length: 797
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 203-999
Cow position: chr18:56128037-56128833 (view UCSC Genome Browser custom track)
Alignm length: 798
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 730, 724

Conread position: 204-1038
Cow position: chr18:51789640-51788806 (view UCSC Genome Browser custom track)
Alignm length: 835
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 204-1050
Cow position: chr18:56330186-56329341 (view UCSC Genome Browser custom track)
Alignm length: 849
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 130

Conread position: 205-885
Cow position: chr18:50271463-50272143 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 149

Conread position: 205-1050
Cow position: chr18:42724838-42723994 (view UCSC Genome Browser custom track)
Alignm length: 850
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 74

Conread position: 206-732
Cow position: chr18:14453285-14452758 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 48

Conread position: 206-831
Cow position: chr18:50250922-50251543 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 401
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 64, 36

Conread position: 207-1038
Cow position: chr18:52446862-52447691 (view UCSC Genome Browser custom track)
Alignm length: 837
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 35

Conread position: 207-1050
Cow position: chr18:49033378-49032536 (view UCSC Genome Browser custom track)
Alignm length: 844
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 833, 0

Conread position: 208-801
Cow position: chr18:33093101-33092508 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 202

Conread position: 208-1038
Cow position: chr18:51400285-51401115 (view UCSC Genome Browser custom track)
Alignm length: 833
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 653, 668

Conread position: 209-999
Cow position: chr18:40306175-40306965 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 212-969
Cow position: chr18:56391590-56390833 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 212-1038
Cow position: chr18:41197500-41198326 (view UCSC Genome Browser custom track)
Alignm length: 831
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 622, 628

Conread position: 212-1059
Cow position: chr18:53610542-53609697 (view UCSC Genome Browser custom track)
Alignm length: 851
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 37

Conread position: 214-879
Cow position: chr18:55497695-55497030 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 361

Conread position: 215-723
Cow position: chr18:53571823-53572318 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 313
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 55

Conread position: 215-921
Cow position: chr18:51839549-51838843 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 129

Conread position: 215-1000
Cow position: chr18:55523320-55524105 (view UCSC Genome Browser custom track)
Alignm length: 793
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 265

Conread position: 217-631
Cow position: chr18:56267530-56267116 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 267
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 53, 47

Conread position: 218-1038
Cow position: chr18:43175593-43174773 (view UCSC Genome Browser custom track)
Alignm length: 823
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 136

Conread position: 218-1039
Cow position: chr18:49021081-49021899 (view UCSC Genome Browser custom track)
Alignm length: 833
Alignm identity: 491
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 170, 210

Conread position: 225-993
Cow position: chr18:54979414-54980182 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 57

Conread position: 225-993
Cow position: chr18:54992674-54993442 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 57

Conread position: 227-1031
Cow position: chr18:55008583-55009385 (view UCSC Genome Browser custom track)
Alignm length: 815
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 96

Conread position: 227-1039
Cow position: chr18:50083306-50084118 (view UCSC Genome Browser custom track)
Alignm length: 818
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 106

Conread position: 231-971
Cow position: chr18:1417862-1418602 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 366

Conread position: 264-1039
Cow position: chr18:55017773-55018548 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 480, 497

Conread position: 268-940
Cow position: chr18:51874044-51874709 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 67

Conread position: 269-568
Cow position: chr18:55442332-55442631 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 185
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 207, 212

Conread position: 269-1039
Cow position: chr18:44184904-44184134 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 65

Conread position: 275-788
Cow position: chr18:43048740-43048229 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 57

Conread position: 275-918
Cow position: chr18:33093118-33092475 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 48

Conread position: 275-1038
Cow position: chr18:44239745-44240508 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 208

Conread position: 276-798
Cow position: chr18:42827394-42827915 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 278-1039
Cow position: chr18:44154463-44153706 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 56

Conread position: 279-993
Cow position: chr18:55067118-55066404 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 480, 485

Conread position: 281-1039
Cow position: chr18:52012448-52011691 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 66

Conread position: 285-723
Cow position: chr18:14453290-14452852 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 126

Conread position: 287-1015
Cow position: chr18:51400280-51401008 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 50

Conread position: 289-1038
Cow position: chr18:51813050-51812301 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 485, 480

Conread position: 295-957
Cow position: chr18:55497698-55497036 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 217

Conread position: 295-999
Cow position: chr18:51789885-51789181 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 452, 468

Conread position: 296-922
Cow position: chr18:22844360-22843731 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 373
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 158, 163

Conread position: 299-804
Cow position: chr18:53571823-53572315 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 306
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 249, 176

Conread position: 299-1014
Cow position: chr18:53559686-53560401 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 460, 466

Conread position: 301-619
Cow position: chr18:56391972-56391654 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 201
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 109, 100

Conread position: 304-1011
Cow position: chr18:44253874-44253180 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 381, 363

Conread position: 304-1017
Cow position: chr18:56493774-56494490 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 66

Conread position: 305-916
Cow position: chr18:50271479-50272090 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 26

Conread position: 305-967
Cow position: chr18:14454002-14453340 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 48

Conread position: 305-1011
Cow position: chr18:51839543-51838837 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 637, 631

Conread position: 305-1038
Cow position: chr18:42960281-42959557 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 49

Conread position: 305-1039
Cow position: chr18:51368585-51367850 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 118

Conread position: 306-1047
Cow position: chr18:42675551-42674814 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 13

Conread position: 309-999
Cow position: chr18:51752313-51751623 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 207

Conread position: 309-1013
Cow position: chr18:53636106-53635402 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 554, 561

Conread position: 309-1038
Cow position: chr18:42790902-42791631 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 45

Conread position: 309-1058
Cow position: chr18:56128059-56128807 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 45

Conread position: 310-915
Cow position: chr18:50031043-50030436 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 22

Conread position: 310-993
Cow position: chr18:53509261-53509944 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 280

Conread position: 310-993
Cow position: chr18:56433408-56434088 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 412
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 113, 42

Conread position: 310-1008
Cow position: chr18:53525715-53526413 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 280

Conread position: 310-1039
Cow position: chr18:50083305-50084034 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 281

Conread position: 310-1039
Cow position: chr18:56493696-56494428 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 22

Conread position: 311-555
Cow position: chr18:43053435-43053191 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 25

Conread position: 311-704
Cow position: chr18:56267520-56267127 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 19

Conread position: 314-994
Cow position: chr18:54992679-54993359 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 314-1039
Cow position: chr18:42837909-42837184 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 23

Conread position: 314-1039
Cow position: chr18:53587140-53586415 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 43

Conread position: 314-1058
Cow position: chr18:54979419-54980162 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 315-966
Cow position: chr18:50295216-50295867 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 39

Conread position: 320-1038
Cow position: chr18:51400230-51400947 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 11

Conread position: 332-999
Cow position: chr18:54966912-54967579 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 418

Conread position: 335-1000
Cow position: chr18:50281639-50282303 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 10

Conread position: 342-1058
Cow position: chr18:49021622-49022326 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 428
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 80, 74

Conread position: 343-1039
Cow position: chr18:40074995-40075691 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 35

Conread position: 344-999
Cow position: chr18:50271434-50272089 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 166

Conread position: 345-1000
Cow position: chr18:50245715-50246370 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 45

Conread position: 346-1038
Cow position: chr18:44398464-44397772 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 348-748
Cow position: chr18:53598329-53597937 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 254
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 150, 36

Conread position: 348-993
Cow position: chr18:22634536-22635178 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 384
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 53, 5

Conread position: 350-915
Cow position: chr18:33093127-33092562 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 305

Conread position: 350-936
Cow position: chr18:42827383-42827974 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 20

Conread position: 351-1039
Cow position: chr18:53498033-53498724 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 416

Conread position: 351-1039
Cow position: chr18:55008457-55009143 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 95

Conread position: 353-729
Cow position: chr18:51970405-51970774 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 231
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 250, 144

Conread position: 353-798
Cow position: chr18:40085954-40085495 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 304
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 160, 149

Conread position: 353-831
Cow position: chr18:44253334-44252864 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 305
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 156, 167

Conread position: 353-999
Cow position: chr18:51874045-51874684 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 420, 114

Conread position: 353-1000
Cow position: chr18:50022508-50021855 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 46

Conread position: 353-1038
Cow position: chr18:41949366-41948681 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 58

Conread position: 353-1039
Cow position: chr18:40074921-40075607 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 63

Conread position: 353-1039
Cow position: chr18:43120257-43119571 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 316

Conread position: 353-1039
Cow position: chr18:55017778-55018464 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 156

Conread position: 354-1038
Cow position: chr18:44239740-44240424 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 570, 577

Conread position: 354-1039
Cow position: chr18:14454037-14453352 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 355-1038
Cow position: chr18:44154470-44153791 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 481

Conread position: 355-1039
Cow position: chr18:42960315-42959640 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 63

Conread position: 356-1039
Cow position: chr18:53509224-53509906 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 10

Conread position: 356-1046
Cow position: chr18:49033397-49032707 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 478, 503

Conread position: 358-861
Cow position: chr18:43048741-43048240 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 212

Conread position: 358-1039
Cow position: chr18:56316036-56316717 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 362-798
Cow position: chr18:56267553-56267117 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 268
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 143, 136

Conread position: 362-1000
Cow position: chr18:43094003-43093377 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 472, 273

Conread position: 365-993
Cow position: chr18:55523302-55523930 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 365-1000
Cow position: chr18:55067116-55066481 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 400

Conread position: 368-917
Cow position: chr18:44253894-44253346 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 377

Conread position: 369-804
Cow position: chr18:14453290-14452855 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 140

Conread position: 369-1050
Cow position: chr18:33065024-33064344 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 132

Conread position: 372-1033
Cow position: chr18:40306170-40306831 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 462, 471

Conread position: 373-1050
Cow position: chr18:53636126-53635450 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 65

Conread position: 377-864
Cow position: chr18:50295362-50295849 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 388

Conread position: 381-990
Cow position: chr18:49021496-49022103 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 36

Conread position: 382-1039
Cow position: chr18:55497695-55497038 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 484, 488

Conread position: 383-1038
Cow position: chr18:53559686-53560341 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 45

Conread position: 386-1039
Cow position: chr18:40074873-40075523 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 45

Conread position: 395-1039
Cow position: chr18:43175818-43175192 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 389
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 447, 48

Conread position: 396-1038
Cow position: chr18:44254030-44253392 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 87

Conread position: 404-1000
Cow position: chr18:50271410-50272006 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 113

Conread position: 422-1038
Cow position: chr18:44184919-44184303 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 591, 604

Conread position: 427-1039
Cow position: chr18:54992708-54993320 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 497, 492

Conread position: 427-1047
Cow position: chr18:1417974-1418593 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 195

Conread position: 428-1050
Cow position: chr18:51400169-51400790 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 72

Conread position: 430-1038
Cow position: chr18:44398464-44397856 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 27

Conread position: 436-1011
Cow position: chr18:51874044-51874612 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 115

Conread position: 436-1038
Cow position: chr18:51969406-51969997 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 69

Conread position: 437-640
Cow position: chr18:43053393-43053190 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 437-1038
Cow position: chr18:50295254-50295855 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 73

Conread position: 437-1093
Cow position: chr18:56391533-56390877 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 397

Conread position: 438-1038
Cow position: chr18:51789907-51789310 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 16

Conread position: 438-1039
Cow position: chr18:43167609-43168208 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 9

Conread position: 440-973
Cow position: chr18:14454035-14453502 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 73

Conread position: 440-1038
Cow position: chr18:43120338-43119740 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 62

Conread position: 440-1039
Cow position: chr18:53525678-53526276 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 10

Conread position: 442-831
Cow position: chr18:43048741-43048352 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 327

Conread position: 443-1000
Cow position: chr18:33093118-33092561 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 21

Conread position: 444-966
Cow position: chr18:42827394-42827915 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 9

Conread position: 446-1038
Cow position: chr18:43094003-43093423 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 56

Conread position: 446-1039
Cow position: chr18:33065115-33064522 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 40

Conread position: 447-1039
Cow position: chr18:54966859-54967451 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 348
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 448-1038
Cow position: chr18:51752341-51751752 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 10

Conread position: 449-996
Cow position: chr18:55523302-55523849 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 68

Conread position: 449-1038
Cow position: chr18:51969018-51969588 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 365
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 86, 15

Conread position: 449-1058
Cow position: chr18:55067116-55066508 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 61

Conread position: 450-1039
Cow position: chr18:42744722-42744133 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 453-832
Cow position: chr18:14453290-14452911 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 319

Conread position: 454-1038
Cow position: chr18:43094160-43093591 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 359
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 304, 55

Conread position: 455-705
Cow position: chr18:40251562-40251808 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 163
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 164, 75

Conread position: 456-724
Cow position: chr18:43053456-43053190 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 461-1039
Cow position: chr18:40306175-40306753 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 458, 473

Conread position: 461-1039
Cow position: chr18:50031060-50030480 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 50

Conread position: 467-862
Cow position: chr18:53571823-53572207 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 257
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 42

Conread position: 478-750
Cow position: chr18:55075111-55075384 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 178
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 168, 0

Conread position: 481-1050
Cow position: chr18:56315823-56316391 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 89

Conread position: 482-1011
Cow position: chr18:1417945-1418474 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 224

Conread position: 484-1039
Cow position: chr18:51789945-51789393 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 346
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 54

Conread position: 494-1050
Cow position: chr18:41949395-41948838 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 356

Conread position: 512-833
Cow position: chr18:55442323-55442644 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 195
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 512-1039
Cow position: chr18:42837963-42837436 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 430

Conread position: 520-993
Cow position: chr18:50295253-50295726 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 297
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 61, 96

Conread position: 529-1013
Cow position: chr18:53610561-53610077 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 61

Conread position: 530-1000
Cow position: chr18:1417825-1418295 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 132

Conread position: 531-972
Cow position: chr18:14453296-14452855 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 325

Conread position: 531-997
Cow position: chr18:51969333-51969797 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 281

Conread position: 531-999
Cow position: chr18:55523300-55523768 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 285

Conread position: 531-1013
Cow position: chr18:53497964-53498449 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 51

Conread position: 532-917
Cow position: chr18:43048735-43048350 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 225

Conread position: 532-993
Cow position: chr18:55008386-55008845 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 278
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 298, 166

Conread position: 532-1039
Cow position: chr18:42790957-42791464 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 312

Conread position: 532-1039
Cow position: chr18:51368777-51368270 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 316
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 57, 35

Conread position: 535-799
Cow position: chr18:51873695-51873960 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 18, 235

Conread position: 537-1038
Cow position: chr18:14454022-14453521 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 61

Conread position: 537-1038
Cow position: chr18:42827402-42827903 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 61

Conread position: 539-1008
Cow position: chr18:42724840-42724371 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 286
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 156, 167

Conread position: 539-1011
Cow position: chr18:51838786-51838319 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 285
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 377, 195

Conread position: 540-1039
Cow position: chr18:40306170-40306669 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 543-1038
Cow position: chr18:43120403-43119908 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 310
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 29

Conread position: 543-1039
Cow position: chr18:44254051-44253559 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 309
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 231, 160

Conread position: 543-1058
Cow position: chr18:50281678-50282192 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 49

Conread position: 544-1039
Cow position: chr18:50031061-50030564 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 54

Conread position: 544-1056
Cow position: chr18:33093101-33092590 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 9

Conread position: 545-1002
Cow position: chr18:50083288-50083745 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 51

Conread position: 553-996
Cow position: chr18:54979406-54979849 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 277
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 281, 290

Conread position: 553-1038
Cow position: chr18:54992666-54993151 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 295
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 200, 191

Conread position: 557-1039
Cow position: chr18:43175590-43175108 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 557-1050
Cow position: chr18:56128055-56128547 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 26

Conread position: 557-1056
Cow position: chr18:42694196-42693700 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 307
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 12

Conread position: 560-804
Cow position: chr18:43053438-43053194 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 572-1038
Cow position: chr18:44398490-44398024 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 303

Conread position: 578-1000
Cow position: chr18:33065151-33064729 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 266
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 68, 76

Conread position: 580-1038
Cow position: chr18:44184929-44184471 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 249

Conread position: 585-1000
Cow position: chr18:42790842-42791257 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 266
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 94, 70

Conread position: 586-1000
Cow position: chr18:50059746-50059330 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 259
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 0

Conread position: 596-1005
Cow position: chr18:43167513-43167922 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 253
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 93, 72

Conread position: 596-1050
Cow position: chr18:52012468-52012017 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 602-999
Cow position: chr18:42960482-42960091 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 245
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 78

Conread position: 603-1000
Cow position: chr18:50049247-50048846 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 256
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 72, 164

Conread position: 603-1005
Cow position: chr18:42827384-42827786 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 256
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 231, 245

Conread position: 603-1038
Cow position: chr18:1417814-1418249 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 266
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 68, 74

Conread position: 604-1036
Cow position: chr18:43023090-43022658 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 274
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 75, 69

Conread position: 605-999
Cow position: chr18:40086954-40086564 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 245
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 64

Conread position: 605-1058
Cow position: chr18:54992634-54993086 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 277
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 162, 135

Conread position: 606-1034
Cow position: chr18:14454037-14453609 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 338

Conread position: 606-1057
Cow position: chr18:52427532-52427981 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 284
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 249, 238

Conread position: 607-1039
Cow position: chr18:33093122-33092690 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 274
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 14, 22

Conread position: 611-918
Cow position: chr18:51873689-51873995 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 611-999
Cow position: chr18:43048740-43048352 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 224

Conread position: 613-1038
Cow position: chr18:42744727-42744302 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 231

Conread position: 614-966
Cow position: chr18:56267469-56267117 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 220
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 614-1011
Cow position: chr18:56248245-56247856 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 253
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 133, 21

Conread position: 615-1039
Cow position: chr18:54966775-54967199 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 253
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 11

Conread position: 615-1039
Cow position: chr18:54979300-54979724 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 251
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 58, 66

Conread position: 616-1038
Cow position: chr18:14453295-14452873 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 324

Conread position: 616-1058
Cow position: chr18:55523301-55523742 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 278
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 250, 254

Conread position: 623-999
Cow position: chr18:50031066-50030691 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 249
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 49, 43

Conread position: 623-1039
Cow position: chr18:42724840-42724424 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 251
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 320, 313

Conread position: 635-999
Cow position: chr18:51839549-51839185 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 218
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 636-1007
Cow position: chr18:50295201-50295572 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 250
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 144, 169

Conread position: 638-1008
Cow position: chr18:50031135-50030767 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 237
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 286, 195

Conread position: 638-1008
Cow position: chr18:56128052-56128422 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 36

Conread position: 641-993
Cow position: chr18:53571829-53572170 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 234
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 33

Conread position: 662-1039
Cow position: chr18:42837980-42837604 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 225
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 680-1039
Cow position: chr18:42985587-42985228 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 236
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 151, 161

Conread position: 684-1038
Cow position: chr18:50049250-50048892 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 228
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 169

Conread position: 688-1038
Cow position: chr18:43023090-43022740 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 215
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 147, 171

Conread position: 689-1006
Cow position: chr18:55442332-55442649 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 195
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 693-1046
Cow position: chr18:56267474-56267121 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 694-1038
Cow position: chr18:43048741-43048397 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 232
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 319, 324

Conread position: 708-1039
Cow position: chr18:56128037-56128369 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 225
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 51

Conread position: 725-1039
Cow position: chr18:56391968-56391654 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 194
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 746-1055
Cow position: chr18:52012486-52012179 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 99, 40

Conread position: 772-1039
Cow position: chr18:56267479-56267212 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 2-621
Cow position: chr19:43570254-43569642 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 383
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 180, 26

Conread position: 2-649
Cow position: chr19:23614491-23615136 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 33

Conread position: 2-879
Cow position: chr19:23614239-23615116 (view UCSC Genome Browser custom track)
Alignm length: 881
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 33

Conread position: 2-999
Cow position: chr19:23613399-23614396 (view UCSC Genome Browser custom track)
Alignm length: 1002
Alignm identity: 622
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 33

Conread position: 2-1039
Cow position: chr19:14940039-14941076 (view UCSC Genome Browser custom track)
Alignm length: 1041
Alignm identity: 658
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 33

Conread position: 2-1039
Cow position: chr19:23613483-23614520 (view UCSC Genome Browser custom track)
Alignm length: 1043
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 33

Conread position: 8-1000
Cow position: chr19:20677420-20678412 (view UCSC Genome Browser custom track)
Alignm length: 1013
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 31

Conread position: 38-1032
Cow position: chr19:23614106-23615101 (view UCSC Genome Browser custom track)
Alignm length: 998
Alignm identity: 621
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 715

Conread position: 41-1034
Cow position: chr19:23613858-23614851 (view UCSC Genome Browser custom track)
Alignm length: 999
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 81

Conread position: 41-1038
Cow position: chr19:14960301-14959322 (view UCSC Genome Browser custom track)
Alignm length: 1002
Alignm identity: 621
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 93

Conread position: 52-414
Cow position: chr19:14948367-14948004 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 229
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 225

Conread position: 57-1038
Cow position: chr19:23613790-23614771 (view UCSC Genome Browser custom track)
Alignm length: 988
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 191

Conread position: 58-1000
Cow position: chr19:23613707-23614649 (view UCSC Genome Browser custom track)
Alignm length: 947
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 128

Conread position: 61-1039
Cow position: chr19:14939930-14940908 (view UCSC Genome Browser custom track)
Alignm length: 980
Alignm identity: 621
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 195

Conread position: 63-713
Cow position: chr19:23614466-23615118 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 186

Conread position: 64-734
Cow position: chr19:20635688-20635018 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 25

Conread position: 97-1039
Cow position: chr19:23614082-23615024 (view UCSC Genome Browser custom track)
Alignm length: 948
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 153

Conread position: 98-1039
Cow position: chr19:14960412-14959489 (view UCSC Genome Browser custom track)
Alignm length: 951
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 411, 259

Conread position: 103-380
Cow position: chr19:14959096-14958819 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 180
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 242, 227

Conread position: 103-717
Cow position: chr19:23597097-23597711 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 103-792
Cow position: chr19:23649790-23650479 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 308

Conread position: 104-498
Cow position: chr19:14948398-14948004 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 257
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 41

Conread position: 104-800
Cow position: chr19:14959500-14958819 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 195

Conread position: 104-871
Cow position: chr19:23649707-23650476 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 313

Conread position: 104-1000
Cow position: chr19:23613669-23614565 (view UCSC Genome Browser custom track)
Alignm length: 898
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 77

Conread position: 105-590
Cow position: chr19:14948480-14947996 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 304
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 395, 77

Conread position: 109-871
Cow position: chr19:43570392-43569642 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 114

Conread position: 119-919
Cow position: chr19:14959654-14958868 (view UCSC Genome Browser custom track)
Alignm length: 803
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 50

Conread position: 120-631
Cow position: chr19:23649974-23650486 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 28

Conread position: 132-1038
Cow position: chr19:23649399-23650305 (view UCSC Genome Browser custom track)
Alignm length: 909
Alignm identity: 621
Alignm E-value: 0
Alignm gaps (pig, cow): 710, 716

Conread position: 132-1039
Cow position: chr19:23649567-23650474 (view UCSC Genome Browser custom track)
Alignm length: 909
Alignm identity: 623
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 279

Conread position: 137-663
Cow position: chr19:20635531-20635005 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 110

Conread position: 137-906
Cow position: chr19:23596966-23597733 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 66

Conread position: 138-960
Cow position: chr19:23649655-23650479 (view UCSC Genome Browser custom track)
Alignm length: 828
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 635

Conread position: 144-971
Cow position: chr19:23596889-23597713 (view UCSC Genome Browser custom track)
Alignm length: 831
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 517, 146

Conread position: 146-804
Cow position: chr19:20678146-20678801 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 27

Conread position: 146-832
Cow position: chr19:14959542-14958871 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 185

Conread position: 146-999
Cow position: chr19:20677810-20678663 (view UCSC Genome Browser custom track)
Alignm length: 857
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 364

Conread position: 146-1000
Cow position: chr19:20677726-20678580 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 31

Conread position: 146-1000
Cow position: chr19:23613375-23614229 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 40

Conread position: 146-1039
Cow position: chr19:20677642-20678535 (view UCSC Genome Browser custom track)
Alignm length: 894
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 146-1039
Cow position: chr19:23649329-23650222 (view UCSC Genome Browser custom track)
Alignm length: 896
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 363

Conread position: 146-1039
Cow position: chr19:23649497-23650390 (view UCSC Genome Browser custom track)
Alignm length: 897
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 108

Conread position: 146-1056
Cow position: chr19:14940099-14941008 (view UCSC Genome Browser custom track)
Alignm length: 913
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 16

Conread position: 171-1039
Cow position: chr19:23596832-23597697 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 176-1000
Cow position: chr19:14959678-14958871 (view UCSC Genome Browser custom track)
Alignm length: 828
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 27

Conread position: 195-832
Cow position: chr19:14960399-14959766 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 471, 240

Conread position: 196-816
Cow position: chr19:20635640-20635020 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 77

Conread position: 197-662
Cow position: chr19:14948470-14948008 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 12

Conread position: 204-999
Cow position: chr19:23613349-23614144 (view UCSC Genome Browser custom track)
Alignm length: 796
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 205-1039
Cow position: chr19:23649304-23650138 (view UCSC Genome Browser custom track)
Alignm length: 837
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 130

Conread position: 227-1039
Cow position: chr19:14959711-14958916 (view UCSC Genome Browser custom track)
Alignm length: 819
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 31

Conread position: 269-1048
Cow position: chr19:23649284-23650061 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 767, 0

Conread position: 305-918
Cow position: chr19:14960373-14959764 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 435, 220

Conread position: 305-1039
Cow position: chr19:43570364-43569644 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 50

Conread position: 310-756
Cow position: chr19:14948443-14947998 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 329-1038
Cow position: chr19:23596822-23597528 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 584, 210

Conread position: 343-918
Cow position: chr19:20635577-20635002 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 13

Conread position: 343-1000
Cow position: chr19:20677419-20678076 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 137

Conread position: 344-1038
Cow position: chr19:23613405-23614099 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 160

Conread position: 353-830
Cow position: chr19:14948484-14948008 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 365-971
Cow position: chr19:20635639-20635033 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 81

Conread position: 400-1038
Cow position: chr19:20635688-20635050 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 43

Conread position: 422-1039
Cow position: chr19:23596831-23597445 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 591, 201

Conread position: 437-1032
Cow position: chr19:14960409-14959816 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 256

Conread position: 448-922
Cow position: chr19:14948471-14948000 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 22

Conread position: 452-1000
Cow position: chr19:20677360-20677908 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 334
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 140, 124

Conread position: 457-1038
Cow position: chr19:23613350-23613931 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 198

Conread position: 529-975
Cow position: chr19:14915952-14916395 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 282
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 62, 19

Conread position: 530-1010
Cow position: chr19:14948475-14947996 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 552-1038
Cow position: chr19:43570452-43569977 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 308
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 30, 55

Conread position: 561-1011
Cow position: chr19:14960453-14960005 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 0

Conread position: 605-1038
Cow position: chr19:14948484-14948052 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 411, 84

Conread position: 623-1039
Cow position: chr19:14960475-14960061 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 268
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 315, 0

Conread position: 683-1039
Cow position: chr19:23649278-23649634 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 233
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 689-1039
Cow position: chr19:14948484-14948135 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 232
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 24, 32

Conread position: 57-455
Cow position: chr2:82800050-82800448 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 254
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 24, 48

Conread position: 67-736
Cow position: chr2:78755697-78756365 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 409
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 56

Conread position: 74-999
Cow position: chr2:78755372-78756295 (view UCSC Genome Browser custom track)
Alignm length: 934
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 96

Conread position: 103-871
Cow position: chr2:82799676-82800446 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 69

Conread position: 103-999
Cow position: chr2:78754244-78755122 (view UCSC Genome Browser custom track)
Alignm length: 899
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 72

Conread position: 103-1000
Cow position: chr2:78755066-78755959 (view UCSC Genome Browser custom track)
Alignm length: 902
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 69

Conread position: 104-464
Cow position: chr2:48689391-48689031 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 233
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 18, 33

Conread position: 118-1000
Cow position: chr2:86465095-86465977 (view UCSC Genome Browser custom track)
Alignm length: 892
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 170

Conread position: 118-1002
Cow position: chr2:78754174-78755041 (view UCSC Genome Browser custom track)
Alignm length: 889
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 268

Conread position: 125-999
Cow position: chr2:78754920-78755790 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 214

Conread position: 132-623
Cow position: chr2:82799957-82800448 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 132-971
Cow position: chr2:86465361-86466200 (view UCSC Genome Browser custom track)
Alignm length: 846
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 44

Conread position: 137-501
Cow position: chr2:86465870-86466232 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 229
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 92

Conread position: 137-841
Cow position: chr2:5874830-5874125 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 49

Conread position: 137-978
Cow position: chr2:78755518-78756355 (view UCSC Genome Browser custom track)
Alignm length: 847
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 171

Conread position: 137-1011
Cow position: chr2:82799542-82800416 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 376

Conread position: 137-1038
Cow position: chr2:82799458-82800359 (view UCSC Genome Browser custom track)
Alignm length: 907
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 199

Conread position: 141-992
Cow position: chr2:5875162-5874313 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 368

Conread position: 141-1011
Cow position: chr2:86465286-86466156 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 477, 467

Conread position: 144-999
Cow position: chr2:86465037-86465892 (view UCSC Genome Browser custom track)
Alignm length: 862
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 101

Conread position: 145-630
Cow position: chr2:48689517-48689033 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 306
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 24, 17

Conread position: 145-1039
Cow position: chr2:78754370-78755246 (view UCSC Genome Browser custom track)
Alignm length: 898
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 78

Conread position: 146-425
Cow position: chr2:86465963-86466240 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 181
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 26

Conread position: 146-707
Cow position: chr2:82799887-82800448 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 146-775
Cow position: chr2:5874737-5874108 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 26

Conread position: 146-839
Cow position: chr2:86465543-86466234 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 550, 546

Conread position: 146-888
Cow position: chr2:5874905-5874163 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 200

Conread position: 146-990
Cow position: chr2:5875073-5874229 (view UCSC Genome Browser custom track)
Alignm length: 851
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 176

Conread position: 146-1039
Cow position: chr2:78754857-78755746 (view UCSC Genome Browser custom track)
Alignm length: 901
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 29

Conread position: 150-820
Cow position: chr2:78755697-78756365 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 403
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 109, 99

Conread position: 196-1039
Cow position: chr2:78754823-78755664 (view UCSC Genome Browser custom track)
Alignm length: 849
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 243

Conread position: 203-716
Cow position: chr2:48689544-48689031 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 309
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 55

Conread position: 205-1015
Cow position: chr2:86465266-86466076 (view UCSC Genome Browser custom track)
Alignm length: 817
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 217

Conread position: 217-1047
Cow position: chr2:5875172-5874341 (view UCSC Genome Browser custom track)
Alignm length: 841
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 107

Conread position: 230-1039
Cow position: chr2:82799467-82800276 (view UCSC Genome Browser custom track)
Alignm length: 813
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 281

Conread position: 271-800
Cow position: chr2:48689559-48689031 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 319
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 144, 0

Conread position: 280-1013
Cow position: chr2:86465005-86465738 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 292

Conread position: 281-1039
Cow position: chr2:78754824-78755580 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 129

Conread position: 305-1039
Cow position: chr2:82799458-82800192 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 708, 721

Conread position: 306-885
Cow position: chr2:78754114-78754688 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 354
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 37, 26

Conread position: 373-884
Cow position: chr2:48689541-48689031 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 328
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 313, 127

Conread position: 428-1039
Cow position: chr2:86464985-86465596 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 365
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 264, 268

Conread position: 533-1038
Cow position: chr2:86465006-86465511 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 322
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 55, 42

Conread position: 541-1005
Cow position: chr2:48689541-48689079 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 126

Conread position: 543-1009
Cow position: chr2:5875180-5874713 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 298
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 236, 214

Conread position: 636-1056
Cow position: chr2:82799453-82799872 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 0

Conread position: 687-999
Cow position: chr2:86464908-86465220 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 195
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 57

Conread position: 710-1011
Cow position: chr2:48689540-48689240 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 124, 0

Conread position: 713-1039
Cow position: chr2:5875178-5874852 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 205
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 111, 126

Conread position: 795-1050
Cow position: chr2:5875180-5874926 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 50

Conread position: 125-1046
Cow position: chr21:12658920-12659841 (view UCSC Genome Browser custom track)
Alignm length: 923
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 585, 580

Conread position: 132-822
Cow position: chr21:12659347-12660040 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 153

Conread position: 132-1039
Cow position: chr21:12658843-12659750 (view UCSC Genome Browser custom track)
Alignm length: 910
Alignm identity: 603
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 44

Conread position: 137-632
Cow position: chr21:34223036-34222541 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 378, 384

Conread position: 137-1039
Cow position: chr21:12608914-12608012 (view UCSC Genome Browser custom track)
Alignm length: 907
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 271

Conread position: 137-1041
Cow position: chr21:12659100-12660004 (view UCSC Genome Browser custom track)
Alignm length: 906
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 400

Conread position: 144-1000
Cow position: chr21:12659023-12659879 (view UCSC Genome Browser custom track)
Alignm length: 860
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 482, 477

Conread position: 145-412
Cow position: chr21:12608234-12607967 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 146-924
Cow position: chr21:12659277-12660057 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 13

Conread position: 146-1008
Cow position: chr21:12659193-12660055 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 96

Conread position: 146-1041
Cow position: chr21:12608821-12607926 (view UCSC Genome Browser custom track)
Alignm length: 898
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 110

Conread position: 176-1039
Cow position: chr21:12658803-12659666 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 16

Conread position: 206-713
Cow position: chr21:34223051-34222542 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 48

Conread position: 220-1039
Cow position: chr21:12608915-12608096 (view UCSC Genome Browser custom track)
Alignm length: 822
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 291

Conread position: 305-798
Cow position: chr21:34223036-34222543 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 381, 364

Conread position: 352-882
Cow position: chr21:34223073-34222543 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 65

Conread position: 353-966
Cow position: chr21:34223153-34222543 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 356-1041
Cow position: chr21:12658815-12659500 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 13

Conread position: 536-1011
Cow position: chr21:34223140-34222666 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 33

Conread position: 541-1011
Cow position: chr21:34223052-34222582 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 121

Conread position: 605-1039
Cow position: chr21:34223153-34222722 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 282
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 45, 41

Conread position: 761-1038
Cow position: chr21:12658800-12659077 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 182
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 73, 87

Conread position: 1-712
Cow position: chr22:12385620-12384907 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 39

Conread position: 1-921
Cow position: chr22:12399712-12398792 (view UCSC Genome Browser custom track)
Alignm length: 923
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 2-293
Cow position: chr22:12475584-12475293 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 185
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 47, 33

Conread position: 2-461
Cow position: chr22:12458223-12457762 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 283
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 54, 50

Conread position: 2-654
Cow position: chr22:12385535-12384882 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 38

Conread position: 2-712
Cow position: chr22:12399459-12398749 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 33

Conread position: 32-1038
Cow position: chr22:12498866-12499871 (view UCSC Genome Browser custom track)
Alignm length: 1009
Alignm identity: 638
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 14

Conread position: 39-497
Cow position: chr22:11701186-11701645 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 296
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 58

Conread position: 40-618
Cow position: chr22:12431149-12430571 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 335
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 202, 212

Conread position: 41-884
Cow position: chr22:12499126-12499969 (view UCSC Genome Browser custom track)
Alignm length: 845
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 471, 460

Conread position: 57-716
Cow position: chr22:12475949-12475290 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 220

Conread position: 57-769
Cow position: chr22:12431300-12430587 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 361

Conread position: 58-546
Cow position: chr22:12458251-12457763 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 304
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 191, 211

Conread position: 58-886
Cow position: chr22:11640627-11641456 (view UCSC Genome Browser custom track)
Alignm length: 835
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 121

Conread position: 59-469
Cow position: chr22:11641048-11641458 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 261
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 211, 207

Conread position: 59-832
Cow position: chr22:12431382-12430609 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 59-1000
Cow position: chr22:12432558-12431617 (view UCSC Genome Browser custom track)
Alignm length: 944
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 206

Conread position: 59-1056
Cow position: chr22:12399822-12398826 (view UCSC Genome Browser custom track)
Alignm length: 999
Alignm identity: 646
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 278

Conread position: 64-1039
Cow position: chr22:12431797-12430822 (view UCSC Genome Browser custom track)
Alignm length: 979
Alignm identity: 636
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 69

Conread position: 66-713
Cow position: chr22:12458412-12457762 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 68

Conread position: 91-965
Cow position: chr22:12419323-12418435 (view UCSC Genome Browser custom track)
Alignm length: 895
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 8

Conread position: 93-788
Cow position: chr22:12399452-12398757 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 71

Conread position: 97-1013
Cow position: chr22:12476413-12475497 (view UCSC Genome Browser custom track)
Alignm length: 920
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 18

Conread position: 103-803
Cow position: chr22:12475987-12475287 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 151

Conread position: 103-803
Cow position: chr22:12499272-12499972 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 151

Conread position: 103-1011
Cow position: chr22:12476323-12475415 (view UCSC Genome Browser custom track)
Alignm length: 909
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 103-1039
Cow position: chr22:12399694-12398758 (view UCSC Genome Browser custom track)
Alignm length: 942
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 221

Conread position: 103-1058
Cow position: chr22:12432262-12431308 (view UCSC Genome Browser custom track)
Alignm length: 960
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 69

Conread position: 104-805
Cow position: chr22:11640757-11641458 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 104-982
Cow position: chr22:12476154-12475277 (view UCSC Genome Browser custom track)
Alignm length: 886
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 150

Conread position: 104-982
Cow position: chr22:12499105-12499982 (view UCSC Genome Browser custom track)
Alignm length: 885
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 150

Conread position: 104-1056
Cow position: chr22:12432009-12431058 (view UCSC Genome Browser custom track)
Alignm length: 956
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 580, 564

Conread position: 105-472
Cow position: chr22:11666599-11666966 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 230
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 309, 314

Conread position: 105-966
Cow position: chr22:12458624-12457763 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 774, 767

Conread position: 118-999
Cow position: chr22:12432415-12431534 (view UCSC Genome Browser custom track)
Alignm length: 886
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 45

Conread position: 119-1038
Cow position: chr22:12476222-12475304 (view UCSC Genome Browser custom track)
Alignm length: 921
Alignm identity: 601
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 13

Conread position: 119-1039
Cow position: chr22:12499037-12499956 (view UCSC Genome Browser custom track)
Alignm length: 922
Alignm identity: 601
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 13

Conread position: 121-1038
Cow position: chr22:12399922-12399011 (view UCSC Genome Browser custom track)
Alignm length: 922
Alignm identity: 613
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 43

Conread position: 132-820
Cow position: chr22:12431393-12430705 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 191

Conread position: 135-973
Cow position: chr22:11640620-11641458 (view UCSC Genome Browser custom track)
Alignm length: 842
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 192

Conread position: 137-628
Cow position: chr22:12418927-12418434 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 285

Conread position: 137-795
Cow position: chr22:12385568-12384908 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 35

Conread position: 137-831
Cow position: chr22:14430334-14431021 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 424
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 52, 38

Conread position: 137-832
Cow position: chr22:14467991-14468685 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 48

Conread position: 137-966
Cow position: chr22:46654029-46654859 (view UCSC Genome Browser custom track)
Alignm length: 838
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 137-993
Cow position: chr22:12431640-12430784 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 685, 699

Conread position: 137-999
Cow position: chr22:12399828-12398966 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 119

Conread position: 137-1000
Cow position: chr22:12432144-12431281 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 120

Conread position: 137-1000
Cow position: chr22:12432312-12431449 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 144-551
Cow position: chr22:14442319-14442723 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 248
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 31

Conread position: 146-472
Cow position: chr22:11701378-11701707 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 219
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 268, 273

Conread position: 146-630
Cow position: chr22:11701210-11701694 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 273

Conread position: 146-716
Cow position: chr22:12419002-12418433 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 360

Conread position: 146-750
Cow position: chr22:14442237-14442829 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 365
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 22

Conread position: 146-831
Cow position: chr22:14441985-14442667 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 420
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 208, 203

Conread position: 146-979
Cow position: chr22:12431799-12430966 (view UCSC Genome Browser custom track)
Alignm length: 836
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 355

Conread position: 146-979
Cow position: chr22:14430091-14430924 (view UCSC Genome Browser custom track)
Alignm length: 846
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 22

Conread position: 146-1000
Cow position: chr22:14429755-14430609 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 105

Conread position: 146-1000
Cow position: chr22:14429839-14430693 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 184

Conread position: 146-1000
Cow position: chr22:14429923-14430777 (view UCSC Genome Browser custom track)
Alignm length: 862
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 22

Conread position: 146-1039
Cow position: chr22:12431883-12430990 (view UCSC Genome Browser custom track)
Alignm length: 898
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 109

Conread position: 146-1039
Cow position: chr22:12432051-12431158 (view UCSC Genome Browser custom track)
Alignm length: 895
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 384

Conread position: 171-1039
Cow position: chr22:12476423-12475555 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 9

Conread position: 176-1000
Cow position: chr22:11640577-11641401 (view UCSC Genome Browser custom track)
Alignm length: 827
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 94

Conread position: 178-963
Cow position: chr22:12385695-12384908 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 142

Conread position: 182-1039
Cow position: chr22:12498847-12499704 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 489

Conread position: 195-979
Cow position: chr22:46654003-46654787 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 46

Conread position: 195-1032
Cow position: chr22:12458618-12457781 (view UCSC Genome Browser custom track)
Alignm length: 843
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 59

Conread position: 197-815
Cow position: chr22:14430310-14430928 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 135

Conread position: 207-830
Cow position: chr22:14467977-14468600 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 569, 548

Conread position: 207-1000
Cow position: chr22:12419294-12418484 (view UCSC Genome Browser custom track)
Alignm length: 812
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 48

Conread position: 208-717
Cow position: chr22:11666450-11666959 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 318

Conread position: 208-799
Cow position: chr22:11701104-11701695 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 218-1039
Cow position: chr22:12399909-12399094 (view UCSC Genome Browser custom track)
Alignm length: 824
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 38

Conread position: 285-1006
Cow position: chr22:14429642-14430363 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 59

Conread position: 298-808
Cow position: chr22:11666456-11666966 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 39

Conread position: 298-885
Cow position: chr22:11701110-11701700 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 275

Conread position: 305-1000
Cow position: chr22:46654029-46654724 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 28

Conread position: 305-1038
Cow position: chr22:12385652-12384917 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 206

Conread position: 305-1050
Cow position: chr22:11640622-11641366 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 13

Conread position: 307-1056
Cow position: chr22:14429499-14430244 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 103

Conread position: 311-1011
Cow position: chr22:12544603-12545303 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 409
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 284, 248

Conread position: 339-1038
Cow position: chr22:12498836-12499535 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 187

Conread position: 343-788
Cow position: chr22:12545466-12545893 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 284
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 430, 144

Conread position: 353-918
Cow position: chr22:14467955-14468520 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 18

Conread position: 353-1032
Cow position: chr22:12544477-12545156 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 413
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 91, 64

Conread position: 354-999
Cow position: chr22:12458627-12457982 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 63

Conread position: 354-1038
Cow position: chr22:12419315-12418614 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 497

Conread position: 358-1047
Cow position: chr22:14442029-14442714 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 62

Conread position: 362-1011
Cow position: chr22:46654002-46654651 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 119

Conread position: 375-1058
Cow position: chr22:12432494-12431812 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 301

Conread position: 376-885
Cow position: chr22:11666450-11666959 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 301

Conread position: 376-967
Cow position: chr22:11701104-11701695 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 279

Conread position: 383-1050
Cow position: chr22:11640616-11641282 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 71

Conread position: 430-1039
Cow position: chr22:12385695-12385084 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 25

Conread position: 440-622
Cow position: chr22:12545395-12545577 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 441-1000
Cow position: chr22:12458624-12458065 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 441-1006
Cow position: chr22:14441946-14442509 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 338
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 248, 6

Conread position: 461-976
Cow position: chr22:11666451-11666966 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 214

Conread position: 461-1053
Cow position: chr22:11701105-11701696 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 216

Conread position: 482-1003
Cow position: chr22:14468000-14468521 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 292

Conread position: 484-1039
Cow position: chr22:46653956-46654511 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 186

Conread position: 544-1039
Cow position: chr22:11701104-11701599 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 117

Conread position: 544-1040
Cow position: chr22:11666450-11666946 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 117

Conread position: 550-1079
Cow position: chr22:12419018-12418490 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 0

Conread position: 606-1039
Cow position: chr22:12458627-12458194 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 623-1039
Cow position: chr22:12432498-12432082 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 260
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 302, 282

Conread position: 718-1050
Cow position: chr22:11640615-11640946 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 215
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 322, 0

Conread position: 2-398
Cow position: chr23:24639685-24640081 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 249
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 54, 33

Conread position: 3-463
Cow position: chr23:24547112-24546652 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 295
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 46, 32

Conread position: 7-368
Cow position: chr23:25626669-25627030 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 226
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 28

Conread position: 28-459
Cow position: chr23:24654024-24654455 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 254
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 418, 379

Conread position: 34-999
Cow position: chr23:25626023-25626989 (view UCSC Genome Browser custom track)
Alignm length: 974
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 226

Conread position: 39-1051
Cow position: chr23:25625947-25626957 (view UCSC Genome Browser custom track)
Alignm length: 1018
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 101

Conread position: 46-900
Cow position: chr23:24639223-24640079 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 287

Conread position: 48-612
Cow position: chr23:24560629-24560063 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 480

Conread position: 58-914
Cow position: chr23:24522547-24521689 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 59-632
Cow position: chr23:25660173-25660746 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 66-379
Cow position: chr23:24535765-24535451 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 203
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 193

Conread position: 69-714
Cow position: chr23:25626398-25627040 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 0

Conread position: 88-882
Cow position: chr23:25626249-25627040 (view UCSC Genome Browser custom track)
Alignm length: 802
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 168

Conread position: 103-703
Cow position: chr23:25698674-25698074 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 29

Conread position: 103-726
Cow position: chr23:24547264-24546641 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 69

Conread position: 104-631
Cow position: chr23:24560655-24560128 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 105-498
Cow position: chr23:25724143-25723750 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 47

Conread position: 105-547
Cow position: chr23:24535893-24535451 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 107-831
Cow position: chr23:24522747-24522011 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 137

Conread position: 118-714
Cow position: chr23:25724046-25723454 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 426, 332

Conread position: 124-631
Cow position: chr23:25626536-25627041 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 41

Conread position: 124-754
Cow position: chr23:24536042-24535411 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 132

Conread position: 132-986
Cow position: chr23:24639227-24640081 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 40

Conread position: 137-469
Cow position: chr23:24654049-24654381 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 186, 190

Conread position: 137-565
Cow position: chr23:24626324-24626750 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 200

Conread position: 137-882
Cow position: chr23:24560874-24560129 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 200

Conread position: 137-998
Cow position: chr23:24522552-24521689 (view UCSC Genome Browser custom track)
Alignm length: 884
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 122

Conread position: 146-663
Cow position: chr23:24535936-24535418 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 110

Conread position: 146-707
Cow position: chr23:25660176-25660737 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 210

Conread position: 173-649
Cow position: chr23:24626276-24626750 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 27

Conread position: 185-787
Cow position: chr23:24547266-24546664 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 71

Conread position: 189-552
Cow position: chr23:24654017-24654380 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 240
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 26, 14

Conread position: 189-789
Cow position: chr23:25660134-25660735 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 192-1041
Cow position: chr23:24522828-24521969 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 41

Conread position: 204-966
Cow position: chr23:24560891-24560129 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 46

Conread position: 206-1011
Cow position: chr23:24639217-24640022 (view UCSC Genome Browser custom track)
Alignm length: 809
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 49

Conread position: 216-619
Cow position: chr23:25724116-25723713 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 216-799
Cow position: chr23:24536034-24535451 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 219-787
Cow position: chr23:25698642-25698074 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 118

Conread position: 227-833
Cow position: chr23:24547308-24546702 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 9

Conread position: 280-832
Cow position: chr23:25660142-25660694 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 285-732
Cow position: chr23:24626304-24626749 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 431, 0

Conread position: 305-711
Cow position: chr23:24654049-24654455 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 266
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 351, 385

Conread position: 305-873
Cow position: chr23:25698640-25698072 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 31

Conread position: 305-923
Cow position: chr23:24536029-24535410 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 580, 0

Conread position: 305-1039
Cow position: chr23:24560874-24560140 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 531, 539

Conread position: 309-725
Cow position: chr23:25724107-25723692 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 0

Conread position: 310-954
Cow position: chr23:24547309-24546665 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 312-967
Cow position: chr23:24536106-24535451 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 22

Conread position: 333-809
Cow position: chr23:24626268-24626744 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 35

Conread position: 364-1050
Cow position: chr23:24560897-24560214 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 638, 22

Conread position: 367-957
Cow position: chr23:25660145-25660735 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 382-753
Cow position: chr23:24654042-24654415 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 246
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 40, 35

Conread position: 395-787
Cow position: chr23:25724105-25723713 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 13

Conread position: 395-1039
Cow position: chr23:24547308-24546664 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 437-1032
Cow position: chr23:25698676-25698081 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 70

Conread position: 448-1038
Cow position: chr23:24536054-24535464 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 451-864
Cow position: chr23:24626302-24626715 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 451-1005
Cow position: chr23:25660145-25660699 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 241

Conread position: 455-831
Cow position: chr23:25724129-25723753 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 457-1038
Cow position: chr23:24547330-24546749 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 466-805
Cow position: chr23:24654042-24654381 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 467-1039
Cow position: chr23:24639226-24639798 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 163

Conread position: 521-1050
Cow position: chr23:24560910-24560382 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 492, 501

Conread position: 535-977
Cow position: chr23:24626302-24626744 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 542-1038
Cow position: chr23:24639217-24639713 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 175

Conread position: 550-921
Cow position: chr23:24654042-24654415 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 0

Conread position: 555-1050
Cow position: chr23:24536031-24535537 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 285

Conread position: 557-954
Cow position: chr23:25724111-25723714 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 15

Conread position: 566-1000
Cow position: chr23:24626177-24626599 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 287
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 138, 63

Conread position: 593-1039
Cow position: chr23:24626276-24626722 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 284

Conread position: 604-1039
Cow position: chr23:25698677-25698242 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 369

Conread position: 619-1039
Cow position: chr23:24536051-24535631 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 265
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 148, 155

Conread position: 619-1039
Cow position: chr23:25660145-25660565 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 241

Conread position: 625-1039
Cow position: chr23:24547330-24546916 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 30

Conread position: 634-981
Cow position: chr23:24654042-24654389 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 223
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 645-1039
Cow position: chr23:25724107-25723713 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 10

Conread position: 646-1039
Cow position: chr23:24639153-24639546 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 242
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 36

Conread position: 680-1039
Cow position: chr23:25698685-25698326 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 227
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 69, 76

Conread position: 719-1038
Cow position: chr23:24654043-24654362 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 115, 122

Conread position: 807-1050
Cow position: chr23:25698642-25698399 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 155
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-455
Cow position: chr24:17077961-17077508 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 288
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 51, 33

Conread position: 2-963
Cow position: chr24:17035910-17034949 (view UCSC Genome Browser custom track)
Alignm length: 965
Alignm identity: 603
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 33

Conread position: 2-978
Cow position: chr24:17035994-17035018 (view UCSC Genome Browser custom track)
Alignm length: 981
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 33

Conread position: 2-1007
Cow position: chr24:17036078-17035074 (view UCSC Genome Browser custom track)
Alignm length: 1008
Alignm identity: 655
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 33

Conread position: 2-1039
Cow position: chr24:17036414-17035377 (view UCSC Genome Browser custom track)
Alignm length: 1041
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 33

Conread position: 6-999
Cow position: chr24:17036158-17035165 (view UCSC Genome Browser custom track)
Alignm length: 997
Alignm identity: 641
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 29

Conread position: 42-378
Cow position: chr24:17013167-17013504 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 211
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 58-727
Cow position: chr24:17035602-17034934 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 279

Conread position: 69-1039
Cow position: chr24:17036431-17035461 (view UCSC Genome Browser custom track)
Alignm length: 971
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-1038
Cow position: chr24:17036175-17035210 (view UCSC Genome Browser custom track)
Alignm length: 968
Alignm identity: 637
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 350

Conread position: 98-462
Cow position: chr24:17013140-17013504 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 230
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 40, 36

Conread position: 103-635
Cow position: chr24:17070524-17071056 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 224

Conread position: 103-754
Cow position: chr24:17078112-17077462 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 313

Conread position: 103-957
Cow position: chr24:17078364-17077510 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 103-1039
Cow position: chr24:17036481-17035545 (view UCSC Genome Browser custom track)
Alignm length: 940
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 413

Conread position: 106-557
Cow position: chr24:17070611-17071062 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 130-710
Cow position: chr24:17070464-17071047 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 283

Conread position: 130-1038
Cow position: chr24:17036619-17035714 (view UCSC Genome Browser custom track)
Alignm length: 909
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 137-1039
Cow position: chr24:17036531-17035629 (view UCSC Genome Browser custom track)
Alignm length: 905
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 379

Conread position: 145-1039
Cow position: chr24:17036189-17035293 (view UCSC Genome Browser custom track)
Alignm length: 901
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 194

Conread position: 203-1039
Cow position: chr24:17078348-17077512 (view UCSC Genome Browser custom track)
Alignm length: 837
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 204-1076
Cow position: chr24:17036630-17035761 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 56

Conread position: 209-789
Cow position: chr24:17070462-17071042 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 373, 363

Conread position: 221-546
Cow position: chr24:17013179-17013504 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 228-873
Cow position: chr24:17070399-17071044 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 447, 11

Conread position: 305-652
Cow position: chr24:17013179-17013525 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 106

Conread position: 337-971
Cow position: chr24:17070421-17071056 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 384

Conread position: 340-1039
Cow position: chr24:17078380-17077680 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 389-732
Cow position: chr24:17013179-17013521 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 0

Conread position: 437-1039
Cow position: chr24:17070438-17071040 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 453-665
Cow position: chr24:16986425-16986637 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 134, 118

Conread position: 457-788
Cow position: chr24:17013165-17013494 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 555-765
Cow position: chr24:16986443-16986653 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 111, 100

Conread position: 563-882
Cow position: chr24:17013185-17013504 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 269, 277

Conread position: 590-1039
Cow position: chr24:17070423-17070872 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 254

Conread position: 605-1038
Cow position: chr24:17070353-17070787 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 274
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 60

Conread position: 611-921
Cow position: chr24:17013149-17013459 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 206
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 621-831
Cow position: chr24:16986425-16986635 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 126, 117

Conread position: 668-925
Cow position: chr24:16986388-16986645 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 170
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 19, 25

Conread position: 684-1039
Cow position: chr24:17013138-17013493 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 186

Conread position: 722-1056
Cow position: chr24:17070387-17070720 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 212
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 318, 0

Conread position: 2-750
Cow position: chr25:34769992-34769244 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 33

Conread position: 8-429
Cow position: chr25:23420437-23420858 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 250
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 30

Conread position: 8-499
Cow position: chr25:34769734-34769243 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 305
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 47, 27

Conread position: 29-451
Cow position: chr25:34732197-34731775 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 258
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 5, 30

Conread position: 48-630
Cow position: chr25:34769778-34769196 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 138

Conread position: 55-910
Cow position: chr25:33298916-33299771 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 282

Conread position: 57-462
Cow position: chr25:34447461-34447857 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 249
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 377, 245

Conread position: 58-630
Cow position: chr25:36801395-36801967 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 89

Conread position: 59-496
Cow position: chr25:33305298-33304866 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 272
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 20

Conread position: 93-415
Cow position: chr25:18642200-18641875 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 209
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 40

Conread position: 103-501
Cow position: chr25:33299468-33299861 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 250
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 14

Conread position: 103-825
Cow position: chr25:33157492-33156770 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 65

Conread position: 103-832
Cow position: chr25:34769975-34769246 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 103-942
Cow position: chr25:34447087-34447915 (view UCSC Genome Browser custom track)
Alignm length: 841
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 153

Conread position: 104-464
Cow position: chr25:22235979-22236339 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 227
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 234, 248

Conread position: 130-453
Cow position: chr25:3664275-3664598 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 194
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 130-466
Cow position: chr25:34734001-34733664 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 216
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 124, 129

Conread position: 132-375
Cow position: chr25:427339-427582 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 132-496
Cow position: chr25:25652954-25653318 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 238
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 327, 322

Conread position: 132-714
Cow position: chr25:326675-327263 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 290

Conread position: 132-1039
Cow position: chr25:33298657-33299564 (view UCSC Genome Browser custom track)
Alignm length: 910
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 211

Conread position: 136-1039
Cow position: chr25:33298913-33299816 (view UCSC Genome Browser custom track)
Alignm length: 906
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 445, 449

Conread position: 137-560
Cow position: chr25:33127817-33128240 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 137-618
Cow position: chr25:23420398-23420879 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 295
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 212, 217

Conread position: 137-620
Cow position: chr25:34763261-34763741 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 0

Conread position: 137-632
Cow position: chr25:326764-327265 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 311
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 71, 64

Conread position: 137-635
Cow position: chr25:33127733-33128231 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 137-711
Cow position: chr25:33144864-33145435 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 148

Conread position: 137-746
Cow position: chr25:36801390-36801994 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 109

Conread position: 137-828
Cow position: chr25:33299166-33299853 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 35

Conread position: 137-839
Cow position: chr25:33306120-33305420 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 431
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 42, 29

Conread position: 137-864
Cow position: chr25:36801234-36801949 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 122

Conread position: 137-918
Cow position: chr25:34770025-34769244 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 445, 438

Conread position: 137-954
Cow position: chr25:34762928-34763739 (view UCSC Genome Browser custom track)
Alignm length: 818
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 0

Conread position: 137-1056
Cow position: chr25:36800730-36801636 (view UCSC Genome Browser custom track)
Alignm length: 923
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 122

Conread position: 137-1058
Cow position: chr25:33298746-33299666 (view UCSC Genome Browser custom track)
Alignm length: 927
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 33

Conread position: 141-637
Cow position: chr25:34473526-34474019 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 314
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 169, 144

Conread position: 143-589
Cow position: chr25:414754-414316 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 278
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 344, 54

Conread position: 143-1000
Cow position: chr25:33298836-33299693 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 279

Conread position: 144-548
Cow position: chr25:22235935-22236339 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 262
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 118, 112

Conread position: 144-597
Cow position: chr25:3664037-3664490 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 286
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 116, 112

Conread position: 144-682
Cow position: chr25:34714056-34714590 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 324
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 202, 193

Conread position: 144-805
Cow position: chr25:33530083-33530744 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 372
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 144-1015
Cow position: chr25:25652378-25653249 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 481, 477

Conread position: 145-597
Cow position: chr25:3664122-3664574 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 277
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 145-608
Cow position: chr25:22235852-22236315 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 17

Conread position: 145-878
Cow position: chr25:24399120-24398403 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 443
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 367, 75

Conread position: 145-885
Cow position: chr25:33157533-33156794 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 13

Conread position: 145-1039
Cow position: chr25:34762852-34763740 (view UCSC Genome Browser custom track)
Alignm length: 897
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 109

Conread position: 146-420
Cow position: chr25:34733901-34733627 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 176
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 194, 188

Conread position: 146-450
Cow position: chr25:366749-367053 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 192
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 162, 168

Conread position: 146-478
Cow position: chr25:33127910-33128242 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 225
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 197, 186

Conread position: 146-524
Cow position: chr25:346472-346850 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 234
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 162, 168

Conread position: 146-549
Cow position: chr25:4657441-4657038 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 258
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 146-628
Cow position: chr25:33144957-33145436 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 79

Conread position: 146-788
Cow position: chr25:34713890-34714532 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 25

Conread position: 146-794
Cow position: chr25:3663955-3664603 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 26

Conread position: 146-882
Cow position: chr25:326521-327263 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 526

Conread position: 146-904
Cow position: chr25:34732584-34731826 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 134

Conread position: 146-975
Cow position: chr25:25652716-25653542 (view UCSC Genome Browser custom track)
Alignm length: 835
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 139

Conread position: 146-1000
Cow position: chr25:34770100-34769246 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 146-1000
Cow position: chr25:36800655-36801497 (view UCSC Genome Browser custom track)
Alignm length: 857
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 434, 439

Conread position: 146-1011
Cow position: chr25:34446962-34447819 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 541, 514

Conread position: 146-1038
Cow position: chr25:33298587-33299479 (view UCSC Genome Browser custom track)
Alignm length: 895
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 435, 445

Conread position: 146-1039
Cow position: chr25:25652212-25653105 (view UCSC Genome Browser custom track)
Alignm length: 895
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 619, 615

Conread position: 146-1039
Cow position: chr25:25652296-25653189 (view UCSC Genome Browser custom track)
Alignm length: 896
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 563, 559

Conread position: 146-1039
Cow position: chr25:25652464-25653357 (view UCSC Genome Browser custom track)
Alignm length: 896
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 269

Conread position: 146-1039
Cow position: chr25:36801075-36801956 (view UCSC Genome Browser custom track)
Alignm length: 897
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 109

Conread position: 146-1056
Cow position: chr25:33305774-33304894 (view UCSC Genome Browser custom track)
Alignm length: 918
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 26

Conread position: 148-1061
Cow position: chr25:34446880-34447785 (view UCSC Genome Browser custom track)
Alignm length: 916
Alignm identity: 594
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 48

Conread position: 149-711
Cow position: chr25:33127661-33128223 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 107

Conread position: 150-669
Cow position: chr25:23420327-23420846 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 40

Conread position: 157-597
Cow position: chr25:33530348-33530788 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 261
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 262, 257

Conread position: 158-451
Cow position: chr25:346568-346861 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 185
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 55

Conread position: 158-873
Cow position: chr25:34433725-34434428 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 443
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 81, 87

Conread position: 159-1011
Cow position: chr25:34770171-34769319 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 50

Conread position: 168-499
Cow position: chr25:18642209-18641875 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 213
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 101

Conread position: 173-1038
Cow position: chr25:33298530-33299395 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 25

Conread position: 174-704
Cow position: chr25:34763214-34763741 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 81

Conread position: 175-554
Cow position: chr25:36844567-36844197 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 245
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 247, 224

Conread position: 180-405
Cow position: chr25:427303-427528 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 181-770
Cow position: chr25:24385357-24384768 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 342
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 160, 149

Conread position: 185-524
Cow position: chr25:3676055-3676394 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 208
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 221, 236

Conread position: 185-571
Cow position: chr25:3636415-3636029 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 237
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 51

Conread position: 185-677
Cow position: chr25:33305339-33304853 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 307
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 296, 21

Conread position: 187-1000
Cow position: chr25:33306397-33305596 (view UCSC Genome Browser custom track)
Alignm length: 821
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 53

Conread position: 195-637
Cow position: chr25:36844631-36844198 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 285
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 67, 61

Conread position: 199-524
Cow position: chr25:34734016-34733691 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 211
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 202-1050
Cow position: chr25:34762825-34763666 (view UCSC Genome Browser custom track)
Alignm length: 849
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 0

Conread position: 203-636
Cow position: chr25:22235825-22236259 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 280
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 16, 55

Conread position: 203-1050
Cow position: chr25:33298476-33299322 (view UCSC Genome Browser custom track)
Alignm length: 850
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 81

Conread position: 204-652
Cow position: chr25:34732106-34731660 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 264
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 333, 351

Conread position: 204-1000
Cow position: chr25:33306464-33305680 (view UCSC Genome Browser custom track)
Alignm length: 804
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 119

Conread position: 205-534
Cow position: chr25:366724-367053 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 199
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 205-788
Cow position: chr25:33144848-33145428 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 164

Conread position: 205-798
Cow position: chr25:36801374-36801967 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 205-1039
Cow position: chr25:34732609-34731775 (view UCSC Genome Browser custom track)
Alignm length: 839
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 302

Conread position: 206-619
Cow position: chr25:3675992-3676405 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 257
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 137, 126

Conread position: 206-636
Cow position: chr25:23267496-23267073 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 264
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 121, 116

Conread position: 206-994
Cow position: chr25:36800547-36801335 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 239

Conread position: 206-1040
Cow position: chr25:25652188-25653022 (view UCSC Genome Browser custom track)
Alignm length: 838
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 379

Conread position: 207-853
Cow position: chr25:3663932-3664579 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 644, 0

Conread position: 207-1039
Cow position: chr25:326330-327168 (view UCSC Genome Browser custom track)
Alignm length: 846
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 162

Conread position: 208-579
Cow position: chr25:4657463-4657092 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 244
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 269, 275

Conread position: 208-830
Cow position: chr25:34473509-34474125 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 161

Conread position: 211-794
Cow position: chr25:3636557-3635974 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 342
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 213, 204

Conread position: 218-987
Cow position: chr25:33157545-33156775 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 33

Conread position: 225-883
Cow position: chr25:34713885-34714540 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 429, 453

Conread position: 227-591
Cow position: chr25:33506769-33507135 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 236
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 354, 0

Conread position: 233-813
Cow position: chr25:33127661-33128241 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 37

Conread position: 266-543
Cow position: chr25:427305-427582 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 180
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 16

Conread position: 269-837
Cow position: chr25:33305421-33304861 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 17

Conread position: 271-800
Cow position: chr25:22235810-22236339 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 281-904
Cow position: chr25:33530136-33530759 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 356
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 409, 399

Conread position: 287-880
Cow position: chr25:33144846-33145436 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 166

Conread position: 287-1039
Cow position: chr25:34732611-34731859 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 130

Conread position: 290-635
Cow position: chr25:3675992-3676337 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 213
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 233, 227

Conread position: 296-801
Cow position: chr25:34433530-34434029 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 318
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 128, 77

Conread position: 296-833
Cow position: chr25:3636556-3636019 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 315
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 107, 93

Conread position: 296-999
Cow position: chr25:34713703-34714407 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 225

Conread position: 297-962
Cow position: chr25:3663938-3664603 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 35

Conread position: 300-644
Cow position: chr25:34733999-34733655 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 223
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 119, 130

Conread position: 304-664
Cow position: chr25:33506762-33507121 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 223
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 351, 0

Conread position: 305-614
Cow position: chr25:366740-367049 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 194
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 305-1011
Cow position: chr25:24399212-24398521 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 420
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 400, 166

Conread position: 308-881
Cow position: chr25:33127651-33128227 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 61

Conread position: 308-1000
Cow position: chr25:34713800-34714492 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 113

Conread position: 310-841
Cow position: chr25:23420319-23420850 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 27

Conread position: 310-885
Cow position: chr25:34473527-34474099 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 350
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 112, 104

Conread position: 310-1039
Cow position: chr25:34770104-34769375 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 27

Conread position: 311-634
Cow position: chr25:4657444-4657121 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 277, 272

Conread position: 311-703
Cow position: chr25:346469-346861 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 242
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 334-1057
Cow position: chr25:33157513-33156791 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 83

Conread position: 341-787
Cow position: chr25:346412-346861 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 287
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 35, 145

Conread position: 351-1050
Cow position: chr25:33157577-33156882 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 7

Conread position: 355-1002
Cow position: chr25:34762810-34763454 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 211

Conread position: 362-945
Cow position: chr25:24385344-24384761 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 339
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 552, 544

Conread position: 367-1028
Cow position: chr25:34732615-34731954 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 625, 635

Conread position: 371-657
Cow position: chr25:34734012-34733726 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 52, 44

Conread position: 373-884
Cow position: chr25:22235828-22236339 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 294

Conread position: 374-702
Cow position: chr25:366725-367053 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 219
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 102, 107

Conread position: 374-787
Cow position: chr25:3675992-3676405 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 244
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 374-1050
Cow position: chr25:25652188-25652864 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 375-619
Cow position: chr25:427330-427574 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 40, 46

Conread position: 375-1047
Cow position: chr25:3663932-3664605 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 46

Conread position: 376-801
Cow position: chr25:4657463-4657038 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 262
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 308, 279

Conread position: 376-970
Cow position: chr25:34473509-34474100 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 352
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 129, 122

Conread position: 376-1000
Cow position: chr25:36800633-36801257 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 220

Conread position: 395-939
Cow position: chr25:23420320-23420865 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 542, 0

Conread position: 426-969
Cow position: chr25:34433492-34434029 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 85

Conread position: 428-754
Cow position: chr25:18642201-18641872 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 209
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 85, 75

Conread position: 439-888
Cow position: chr25:36844639-36844199 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 284
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 395, 286

Conread position: 442-964
Cow position: chr25:33127703-33128224 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 445-889
Cow position: chr25:22235816-22236260 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 8

Conread position: 446-1011
Cow position: chr25:24385344-24384779 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 321
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 238, 209

Conread position: 451-684
Cow position: chr25:34433016-34433247 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 213, 6

Conread position: 454-1055
Cow position: chr25:34762825-34763423 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 0

Conread position: 455-1031
Cow position: chr25:33144846-33145419 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 120

Conread position: 457-849
Cow position: chr25:346447-346839 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 253
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 187, 194

Conread position: 461-886
Cow position: chr25:4657462-4657037 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 260
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 201, 194

Conread position: 461-1040
Cow position: chr25:3663934-3664513 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 20

Conread position: 461-1044
Cow position: chr25:34473510-34474090 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 352
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 223, 212

Conread position: 463-1054
Cow position: chr25:3636557-3635966 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 345
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 199, 192

Conread position: 468-813
Cow position: chr25:34733999-34733654 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 209
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 472-1027
Cow position: chr25:24385402-24384847 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 325
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 218, 187

Conread position: 475-1009
Cow position: chr25:23420316-23420850 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 34

Conread position: 476-1039
Cow position: chr25:33127653-33128215 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 18

Conread position: 495-1050
Cow position: chr25:34770171-34769617 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 545, 0

Conread position: 516-793
Cow position: chr25:427303-427581 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 272, 0

Conread position: 530-1000
Cow position: chr25:36800535-36801005 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 85

Conread position: 532-832
Cow position: chr25:18642181-18641878 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 112, 0

Conread position: 532-1038
Cow position: chr25:23420054-23420543 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 312
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 238, 19

Conread position: 536-968
Cow position: chr25:36844626-36844203 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 275
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 345, 277

Conread position: 541-1032
Cow position: chr25:36800462-36800953 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 311
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 30

Conread position: 541-1039
Cow position: chr25:22235828-22236326 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 329

Conread position: 542-742
Cow position: chr25:34433020-34433220 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 63, 58

Conread position: 542-864
Cow position: chr25:366725-367047 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 186, 192

Conread position: 542-919
Cow position: chr25:346448-346825 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 244
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 186, 192

Conread position: 542-948
Cow position: chr25:3675992-3676398 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 242
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 149, 117

Conread position: 542-1038
Cow position: chr25:34433524-34434014 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 81

Conread position: 544-969
Cow position: chr25:4657463-4657038 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 266
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 31

Conread position: 544-1039
Cow position: chr25:36800633-36801128 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 48

Conread position: 544-1059
Cow position: chr25:34473509-34474020 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 307
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 146, 129

Conread position: 551-1039
Cow position: chr25:34713875-34714363 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 304
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 148, 131

Conread position: 556-832
Cow position: chr25:34733995-34733719 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 560-819
Cow position: chr25:18641406-18641155 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 170
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 563-1038
Cow position: chr25:33144870-33145342 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 142

Conread position: 563-1039
Cow position: chr25:34446875-34447351 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 53

Conread position: 563-1045
Cow position: chr25:23420320-23420803 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 294

Conread position: 564-1000
Cow position: chr25:414753-414325 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 277
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 278, 56

Conread position: 569-1044
Cow position: chr25:33127661-33128136 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 32

Conread position: 584-922
Cow position: chr25:18642213-18641872 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 222
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 144, 0

Conread position: 590-810
Cow position: chr25:34432984-34433204 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 593-1000
Cow position: chr25:346412-346822 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 247
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 30

Conread position: 597-999
Cow position: chr25:34433495-34433894 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 262
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 252, 110

Conread position: 607-1038
Cow position: chr25:36800444-36800875 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 274
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 179, 174

Conread position: 615-1046
Cow position: chr25:36844631-36844209 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 274
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 278, 0

Conread position: 625-955
Cow position: chr25:366724-367054 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 198
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 627-879
Cow position: chr25:427330-427582 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 137

Conread position: 641-979
Cow position: chr25:34733994-34733656 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 216
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 646-1039
Cow position: chr25:23420319-23420712 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 196

Conread position: 647-1002
Cow position: chr25:4657444-4657089 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 221
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 256, 250

Conread position: 675-998
Cow position: chr25:18642206-18641879 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 203
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 140, 0

Conread position: 677-1039
Cow position: chr25:346412-346777 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 220
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 681-1038
Cow position: chr25:34433495-34433849 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 226
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 180, 110

Conread position: 684-979
Cow position: chr25:34762803-34763098 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 187
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 689-1039
Cow position: chr25:3676055-3676405 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 210
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 58

Conread position: 698-1039
Cow position: chr25:3663919-3664260 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 214
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 699-1026
Cow position: chr25:33530302-33530629 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 198
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 703-1039
Cow position: chr25:34732615-34732279 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 146

Conread position: 709-1015
Cow position: chr25:366724-367030 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 195
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 103, 108

Conread position: 713-963
Cow position: chr25:427332-427582 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 114, 129

Conread position: 725-1004
Cow position: chr25:34733994-34733715 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 111, 123

Conread position: 729-1056
Cow position: chr25:34446873-34447199 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 208
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 55

Conread position: 749-1046
Cow position: chr25:427278-427581 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 102

Conread position: 781-1011
Cow position: chr25:22235816-22236046 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 787-1057
Cow position: chr25:34732615-34732346 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 253, 0

Conread position: 791-1039
Cow position: chr25:34734012-34733764 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 796-1039
Cow position: chr25:4657463-4657220 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 155
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 875-1041
Cow position: chr25:33144846-33145012 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 103-490
Cow position: chr27:21615790-21615404 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 234
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 175, 153

Conread position: 146-780
Cow position: chr27:21615998-21615368 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 40

Conread position: 305-1008
Cow position: chr27:21616181-21615474 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 44

Conread position: 365-1038
Cow position: chr27:21616289-21615611 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 199

Conread position: 449-994
Cow position: chr27:21615948-21615404 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 128

Conread position: 609-1036
Cow position: chr27:21616298-21615865 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 263
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 147

Conread position: 1-1059
Cow position: chr28:7757547-7758588 (view UCSC Genome Browser custom track)
Alignm length: 1070
Alignm identity: 625
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 39

Conread position: 3-467
Cow position: chr28:9253152-9253617 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 284
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 46, 35

Conread position: 6-413
Cow position: chr28:34673491-34673898 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 252
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 32

Conread position: 28-864
Cow position: chr28:7757492-7758326 (view UCSC Genome Browser custom track)
Alignm length: 839
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 551, 10

Conread position: 38-965
Cow position: chr28:9298651-9299560 (view UCSC Genome Browser custom track)
Alignm length: 933
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 11

Conread position: 55-894
Cow position: chr28:34695761-34696598 (view UCSC Genome Browser custom track)
Alignm length: 842
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 201

Conread position: 55-1039
Cow position: chr28:7757853-7758820 (view UCSC Genome Browser custom track)
Alignm length: 989
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 211

Conread position: 57-729
Cow position: chr28:7810283-7810946 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 23

Conread position: 64-1042
Cow position: chr28:11334195-11333217 (view UCSC Genome Browser custom track)
Alignm length: 991
Alignm identity: 594
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 206

Conread position: 104-466
Cow position: chr28:33210294-33210657 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 138

Conread position: 120-1038
Cow position: chr28:9298649-9299549 (view UCSC Genome Browser custom track)
Alignm length: 924
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 27

Conread position: 125-1050
Cow position: chr28:9298570-9299476 (view UCSC Genome Browser custom track)
Alignm length: 931
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 22

Conread position: 137-550
Cow position: chr28:33210243-33210657 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 396

Conread position: 137-753
Cow position: chr28:9253034-9253651 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 570, 0

Conread position: 137-788
Cow position: chr28:34695927-34696578 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 119

Conread position: 137-1039
Cow position: chr28:7757431-7758333 (view UCSC Genome Browser custom track)
Alignm length: 907
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 49

Conread position: 141-903
Cow position: chr28:7758107-7758853 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 45

Conread position: 141-922
Cow position: chr28:9289937-9290714 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 14

Conread position: 146-700
Cow position: chr28:34673379-34673933 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 331
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 110

Conread position: 146-751
Cow position: chr28:11333777-11333171 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 370
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 181, 177

Conread position: 146-798
Cow position: chr28:7758196-7758831 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 107

Conread position: 146-804
Cow position: chr28:7810288-7810937 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 0

Conread position: 147-1000
Cow position: chr28:7757357-7758210 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 29

Conread position: 177-1039
Cow position: chr28:34695716-34696577 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 9

Conread position: 196-798
Cow position: chr28:9253009-9253611 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 197-562
Cow position: chr28:7810582-7810947 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 226
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 148, 140

Conread position: 200-756
Cow position: chr28:34673348-34673905 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 330
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 6, 59

Conread position: 203-634
Cow position: chr28:33210225-33210657 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 53

Conread position: 217-954
Cow position: chr28:34695839-34696576 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 147

Conread position: 281-921
Cow position: chr28:9253010-9253651 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 394

Conread position: 281-944
Cow position: chr28:11334146-11333483 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 241

Conread position: 305-669
Cow position: chr28:33210243-33210608 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 0

Conread position: 307-1039
Cow position: chr28:7757349-7758081 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 167

Conread position: 309-966
Cow position: chr28:9252954-9253611 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 49

Conread position: 309-979
Cow position: chr28:7810283-7810944 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 526, 254

Conread position: 310-1007
Cow position: chr28:9289938-9290631 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 26

Conread position: 311-832
Cow position: chr28:34673376-34673897 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 318
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 223, 204

Conread position: 340-916
Cow position: chr28:9299189-9299758 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 345
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 5, 29

Conread position: 344-1064
Cow position: chr28:9252904-9253625 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 99

Conread position: 345-993
Cow position: chr28:11334249-11333602 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 7

Conread position: 352-768
Cow position: chr28:7758470-7758886 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 269
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 355, 308

Conread position: 353-750
Cow position: chr28:34679579-34679181 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 243
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 239, 51

Conread position: 357-1039
Cow position: chr28:34695811-34696493 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 171

Conread position: 366-1039
Cow position: chr28:9289910-9290579 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 408
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 113, 43

Conread position: 374-802
Cow position: chr28:33210228-33210657 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 0

Conread position: 375-840
Cow position: chr28:34673356-34673821 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 292
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 133, 146

Conread position: 395-1050
Cow position: chr28:7810285-7810930 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 119

Conread position: 454-885
Cow position: chr28:33210223-33210656 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 210

Conread position: 456-1000
Cow position: chr28:34673353-34673897 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 341
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 45, 56

Conread position: 479-1039
Cow position: chr28:7757191-7757745 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 494-992
Cow position: chr28:9289708-9290202 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 302
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 65, 79

Conread position: 530-1039
Cow position: chr28:11334233-11333724 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 313
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 68

Conread position: 542-970
Cow position: chr28:33210228-33210657 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 0

Conread position: 613-1004
Cow position: chr28:34679571-34679179 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 244
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 230, 22

Conread position: 622-1039
Cow position: chr28:33210223-33210642 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 624-1005
Cow position: chr28:34673353-34673734 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 246
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 37, 31

Conread position: 681-979
Cow position: chr28:7810244-7810533 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 194
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 168, 46

Conread position: 706-1048
Cow position: chr28:33210223-33210565 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 165

Conread position: 106-788
Cow position: chr29:39627524-39626845 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 150

Conread position: 185-925
Cow position: chr29:39627613-39626876 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 138

Conread position: 203-831
Cow position: chr29:39627510-39626886 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 5

Conread position: 305-999
Cow position: chr29:39627577-39626886 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 110

Conread position: 353-1038
Cow position: chr29:39627613-39626931 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 163

Conread position: 589-964
Cow position: chr29:39627629-39627254 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 238
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 87, 78

Conread position: 33-711
Cow position: chr3:62722247-62721568 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 154

Conread position: 57-972
Cow position: chr3:62742381-62743270 (view UCSC Genome Browser custom track)
Alignm length: 924
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 129

Conread position: 63-921
Cow position: chr3:62742637-62743471 (view UCSC Genome Browser custom track)
Alignm length: 862
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 19

Conread position: 64-967
Cow position: chr3:62742556-62743433 (view UCSC Genome Browser custom track)
Alignm length: 907
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 85

Conread position: 103-631
Cow position: chr3:62722092-62721564 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 103-713
Cow position: chr3:77351175-77350576 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 372
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 71, 62

Conread position: 103-731
Cow position: chr3:68027157-68027784 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 83

Conread position: 106-789
Cow position: chr3:62722257-62721574 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 403

Conread position: 118-627
Cow position: chr3:68045849-68046356 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 317
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 310, 298

Conread position: 137-496
Cow position: chr3:20194905-20195264 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 231
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 285, 278

Conread position: 137-719
Cow position: chr3:68045784-68046364 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 27

Conread position: 142-825
Cow position: chr3:77351304-77350632 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 422
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 28, 34

Conread position: 146-695
Cow position: chr3:20194746-20195295 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 146-780
Cow position: chr3:77351215-77350593 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 384
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 58, 36

Conread position: 146-852
Cow position: chr3:68027032-68027738 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 18

Conread position: 146-878
Cow position: chr3:62722301-62721567 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 447, 431

Conread position: 146-892
Cow position: chr3:68045625-68046369 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 108

Conread position: 150-579
Cow position: chr3:20194833-20195263 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 150-922
Cow position: chr3:62722381-62721609 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 59

Conread position: 151-969
Cow position: chr3:62742226-62743032 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 12

Conread position: 211-787
Cow position: chr3:20194727-20195303 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 227-735
Cow position: chr3:62743034-62743534 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 315
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 273, 75

Conread position: 275-919
Cow position: chr3:68027077-68027721 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 141

Conread position: 275-919
Cow position: chr3:68045670-68046314 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 290-542
Cow position: chr3:20194446-20194698 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 126, 143

Conread position: 296-872
Cow position: chr3:20194728-20195304 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 125

Conread position: 305-1011
Cow position: chr3:68045616-68046322 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 49

Conread position: 309-916
Cow position: chr3:77351305-77350707 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 366
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 66, 124

Conread position: 309-1039
Cow position: chr3:62722306-62721576 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 717, 703

Conread position: 314-1011
Cow position: chr3:68027032-68027729 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 195

Conread position: 345-1032
Cow position: chr3:62742250-62742932 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 72

Conread position: 350-832
Cow position: chr3:77351180-77350706 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 298
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 203, 81

Conread position: 374-597
Cow position: chr3:20194446-20194669 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 126, 138

Conread position: 376-1057
Cow position: chr3:62722323-62721643 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 664, 0

Conread position: 379-954
Cow position: chr3:20194727-20195302 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 348
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 40, 35

Conread position: 427-1039
Cow position: chr3:68045654-68046266 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 249

Conread position: 431-1008
Cow position: chr3:68045574-68046151 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 117

Conread position: 437-664
Cow position: chr3:16020400-16020177 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 69

Conread position: 437-1038
Cow position: chr3:68027071-68027672 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 420

Conread position: 463-1041
Cow position: chr3:20194727-20195305 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 35

Conread position: 519-747
Cow position: chr3:16020402-16020178 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 189, 0

Conread position: 549-1038
Cow position: chr3:68045608-68046097 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 550-1038
Cow position: chr3:68027016-68027504 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 564-1039
Cow position: chr3:62722387-62721912 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 49

Conread position: 684-1038
Cow position: chr3:68045575-68045929 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 226
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 174, 169

Conread position: 789-1011
Cow position: chr3:20194441-20194663 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 137-601
Cow position: chr4:65121548-65122012 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 276
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 28, 39

Conread position: 147-636
Cow position: chr4:65495002-65494505 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 300
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 191

Conread position: 185-544
Cow position: chr4:65494788-65494429 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 227
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 243, 230

Conread position: 185-559
Cow position: chr4:65703604-65703230 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 226
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 70

Conread position: 195-831
Cow position: chr4:42314293-42313662 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 380
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 139

Conread position: 197-664
Cow position: chr4:42314122-42313661 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 283
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 58, 73

Conread position: 199-832
Cow position: chr4:42314625-42313991 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 369
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 69

Conread position: 206-916
Cow position: chr4:42315288-42314580 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 435
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 61

Conread position: 209-796
Cow position: chr4:65495022-65494429 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 356
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 169, 392

Conread position: 266-636
Cow position: chr4:65261576-65261206 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 235
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 233, 245

Conread position: 296-880
Cow position: chr4:65495019-65494429 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 360
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 132, 120

Conread position: 373-811
Cow position: chr4:65703668-65703230 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 261
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 58, 65

Conread position: 443-810
Cow position: chr4:42314297-42313929 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 228
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 143

Conread position: 510-742
Cow position: chr5:34281393-34281625 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 71, 203

Conread position: 589-825
Cow position: chr5:34281388-34281624 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 169

Conread position: 74-882
Cow position: chr6:49396167-49396969 (view UCSC Genome Browser custom track)
Alignm length: 812
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 7

Conread position: 93-827
Cow position: chr6:49396264-49396998 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 174

Conread position: 103-993
Cow position: chr6:49340553-49341443 (view UCSC Genome Browser custom track)
Alignm length: 891
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 103-1014
Cow position: chr6:49340469-49341380 (view UCSC Genome Browser custom track)
Alignm length: 913
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 312

Conread position: 137-1038
Cow position: chr6:49340419-49341320 (view UCSC Genome Browser custom track)
Alignm length: 904
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 442, 435

Conread position: 137-1050
Cow position: chr6:49428579-49429491 (view UCSC Genome Browser custom track)
Alignm length: 917
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 200

Conread position: 145-1000
Cow position: chr6:49428419-49429274 (view UCSC Genome Browser custom track)
Alignm length: 862
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 125

Conread position: 146-416
Cow position: chr6:49429260-49429528 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 234, 0

Conread position: 146-882
Cow position: chr6:49428756-49429492 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 375

Conread position: 146-896
Cow position: chr6:49396155-49396899 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 33

Conread position: 146-1039
Cow position: chr6:49428336-49429229 (view UCSC Genome Browser custom track)
Alignm length: 897
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 81

Conread position: 146-1050
Cow position: chr6:49428504-49429407 (view UCSC Genome Browser custom track)
Alignm length: 907
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 120

Conread position: 146-1058
Cow position: chr6:49428252-49429163 (view UCSC Genome Browser custom track)
Alignm length: 917
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 165

Conread position: 148-1000
Cow position: chr6:49395905-49396751 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 31

Conread position: 150-998
Cow position: chr6:49428675-49429523 (view UCSC Genome Browser custom track)
Alignm length: 852
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 276

Conread position: 152-648
Cow position: chr6:49362369-49362853 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 319
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 103, 114

Conread position: 166-1050
Cow position: chr6:49395753-49396632 (view UCSC Genome Browser custom track)
Alignm length: 895
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 190

Conread position: 197-732
Cow position: chr6:49362330-49362853 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 330
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 301, 0

Conread position: 198-1039
Cow position: chr6:49395871-49396706 (view UCSC Genome Browser custom track)
Alignm length: 852
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 72

Conread position: 202-1038
Cow position: chr6:49340400-49341236 (view UCSC Genome Browser custom track)
Alignm length: 838
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 459, 453

Conread position: 208-1057
Cow position: chr6:49428230-49429078 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 184

Conread position: 271-1000
Cow position: chr6:49428207-49428938 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 213

Conread position: 280-1000
Cow position: chr6:49362088-49362785 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 72

Conread position: 281-1039
Cow position: chr6:49340395-49341153 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 73

Conread position: 313-1011
Cow position: chr6:49396232-49396930 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 104

Conread position: 358-1039
Cow position: chr6:49340388-49341069 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 297

Conread position: 371-1050
Cow position: chr6:49428224-49428903 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 670

Conread position: 422-1039
Cow position: chr6:49340368-49340985 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 99

Conread position: 530-726
Cow position: chr6:39664462-39664266 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 68

Conread position: 584-1038
Cow position: chr6:49340362-49340816 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 321

Conread position: 784-1015
Cow position: chr6:49428218-49428449 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 73

Conread position: 1-598
Cow position: chr7:11601056-11600459 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 1-676
Cow position: chr7:1439600-1440276 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 39

Conread position: 2-882
Cow position: chr7:3179997-3180876 (view UCSC Genome Browser custom track)
Alignm length: 892
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 32

Conread position: 2-956
Cow position: chr7:42879228-42878274 (view UCSC Genome Browser custom track)
Alignm length: 960
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 57

Conread position: 2-1039
Cow position: chr7:1014405-1015436 (view UCSC Genome Browser custom track)
Alignm length: 1041
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 33

Conread position: 7-676
Cow position: chr7:1014824-1015495 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 28

Conread position: 38-1038
Cow position: chr7:3179780-3180781 (view UCSC Genome Browser custom track)
Alignm length: 1006
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 44

Conread position: 56-496
Cow position: chr7:18390348-18390788 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 274
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 57-1038
Cow position: chr7:1014376-1015351 (view UCSC Genome Browser custom track)
Alignm length: 987
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 77

Conread position: 66-631
Cow position: chr7:3180312-3180877 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 202

Conread position: 102-921
Cow position: chr7:1014667-1015488 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 152

Conread position: 103-921
Cow position: chr7:1439451-1440269 (view UCSC Genome Browser custom track)
Alignm length: 831
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 137

Conread position: 103-1011
Cow position: chr7:3179762-3180670 (view UCSC Genome Browser custom track)
Alignm length: 913
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 150

Conread position: 103-1038
Cow position: chr7:1014338-1015267 (view UCSC Genome Browser custom track)
Alignm length: 943
Alignm identity: 601
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 151

Conread position: 103-1050
Cow position: chr7:3179930-3180875 (view UCSC Genome Browser custom track)
Alignm length: 952
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 728, 737

Conread position: 105-698
Cow position: chr7:11601036-11600443 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 493, 478

Conread position: 105-843
Cow position: chr7:11601204-11600466 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 556, 550

Conread position: 105-1005
Cow position: chr7:8277327-8278227 (view UCSC Genome Browser custom track)
Alignm length: 912
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 28

Conread position: 109-1038
Cow position: chr7:42879205-42878276 (view UCSC Genome Browser custom track)
Alignm length: 933
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 474, 489

Conread position: 123-999
Cow position: chr7:8324818-8325694 (view UCSC Genome Browser custom track)
Alignm length: 893
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 48

Conread position: 132-1038
Cow position: chr7:3179707-3180613 (view UCSC Genome Browser custom track)
Alignm length: 913
Alignm identity: 602
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 124

Conread position: 137-416
Cow position: chr7:28846690-28846969 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 179
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 194, 200

Conread position: 137-750
Cow position: chr7:8277947-8278558 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 38

Conread position: 142-1039
Cow position: chr7:42879257-42878359 (view UCSC Genome Browser custom track)
Alignm length: 900
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 885

Conread position: 144-450
Cow position: chr7:11600745-11600439 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 188
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 201, 189

Conread position: 144-620
Cow position: chr7:28846613-28847089 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 296
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 63

Conread position: 144-858
Cow position: chr7:12293286-12294000 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 414
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 634, 640

Conread position: 144-1000
Cow position: chr7:8325259-8326115 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 41

Conread position: 146-696
Cow position: chr7:18390270-18390820 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 146-749
Cow position: chr7:8325513-8326116 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 29

Conread position: 146-765
Cow position: chr7:18390186-18390805 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 186

Conread position: 146-831
Cow position: chr7:8243410-8244092 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 18

Conread position: 146-832
Cow position: chr7:11434946-11434281 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 24

Conread position: 146-966
Cow position: chr7:8277620-8278440 (view UCSC Genome Browser custom track)
Alignm length: 834
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 104

Conread position: 146-999
Cow position: chr7:8277704-8278555 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 110

Conread position: 146-1000
Cow position: chr7:8242991-8243844 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 31

Conread position: 146-1000
Cow position: chr7:8324757-8325611 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 23

Conread position: 146-1039
Cow position: chr7:1014297-1015184 (view UCSC Genome Browser custom track)
Alignm length: 898
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 37

Conread position: 185-595
Cow position: chr7:1438312-1438722 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 247
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 89, 103

Conread position: 195-1038
Cow position: chr7:42879287-42878444 (view UCSC Genome Browser custom track)
Alignm length: 846
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 403

Conread position: 197-1000
Cow position: chr7:8277587-8278390 (view UCSC Genome Browser custom track)
Alignm length: 814
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 207

Conread position: 198-753
Cow position: chr7:11434824-11434276 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 346
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 52

Conread position: 198-840
Cow position: chr7:18390156-18390796 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 199-918
Cow position: chr7:8243379-8244095 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 436
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 67, 50

Conread position: 205-961
Cow position: chr7:11601188-11600432 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 127

Conread position: 205-1039
Cow position: chr7:1014272-1015100 (view UCSC Genome Browser custom track)
Alignm length: 838
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 211

Conread position: 207-975
Cow position: chr7:1014688-1015456 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 62

Conread position: 211-943
Cow position: chr7:12293269-12294001 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 651, 658

Conread position: 212-999
Cow position: chr7:8325243-8326030 (view UCSC Genome Browser custom track)
Alignm length: 800
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 61

Conread position: 215-1000
Cow position: chr7:3179706-3180491 (view UCSC Genome Browser custom track)
Alignm length: 790
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 205

Conread position: 216-870
Cow position: chr7:28846433-28847089 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 383
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 63

Conread position: 259-1038
Cow position: chr7:11601221-11600439 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 322

Conread position: 274-933
Cow position: chr7:18390146-18390805 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 136

Conread position: 278-996
Cow position: chr7:1439458-1440176 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 66

Conread position: 300-944
Cow position: chr7:28846433-28847077 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 115

Conread position: 309-1000
Cow position: chr7:42879341-42878650 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 324-1039
Cow position: chr7:3179646-3180362 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 510

Conread position: 326-767
Cow position: chr7:1438285-1438726 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 261
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 350-993
Cow position: chr7:8242943-8243585 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 389
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 61

Conread position: 350-1000
Cow position: chr7:42879384-42878734 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 246

Conread position: 353-1000
Cow position: chr7:8242862-8243508 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 392
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 86, 56

Conread position: 353-1000
Cow position: chr7:8277323-8277970 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 405
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 85

Conread position: 355-999
Cow position: chr7:1439451-1440095 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 53

Conread position: 358-1015
Cow position: chr7:1438068-1438722 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 378
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 8

Conread position: 359-1019
Cow position: chr7:18390147-18390808 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 65

Conread position: 365-1026
Cow position: chr7:12293339-12294000 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 385
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 325, 318

Conread position: 376-1000
Cow position: chr7:8324735-8325359 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 130

Conread position: 379-1012
Cow position: chr7:12293269-12293902 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 370
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 31

Conread position: 422-1000
Cow position: chr7:11601223-11600645 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 437-1000
Cow position: chr7:8277237-8277802 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 338
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 142

Conread position: 450-1039
Cow position: chr7:18390156-18390743 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 13

Conread position: 452-1039
Cow position: chr7:1014267-1014848 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 0

Conread position: 454-917
Cow position: chr7:8324729-8325192 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 311
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 74, 50

Conread position: 463-1029
Cow position: chr7:12293269-12293832 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 339
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 557, 0

Conread position: 468-1041
Cow position: chr7:28846433-28847006 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 347
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 382, 377

Conread position: 469-682
Cow position: chr7:16643324-16643537 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 108

Conread position: 511-1039
Cow position: chr7:18390047-18390575 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 159

Conread position: 531-999
Cow position: chr7:1014096-1014562 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 281
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 28

Conread position: 543-1039
Cow position: chr7:18389995-18390491 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 221

Conread position: 548-1000
Cow position: chr7:8242805-8243257 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 282
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 41

Conread position: 596-1027
Cow position: chr7:1014246-1014676 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 278
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 254, 10

Conread position: 596-1039
Cow position: chr7:12293318-12293761 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 262
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 163, 169

Conread position: 604-915
Cow position: chr7:1439448-1439762 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 210
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 230, 140

Conread position: 605-1009
Cow position: chr7:1014084-1014488 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 237
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 124, 141

Conread position: 629-1000
Cow position: chr7:42879442-42879070 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 238
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 59

Conread position: 731-1039
Cow position: chr7:12293285-12293593 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 187
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-653
Cow position: chr8:55581122-55581773 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 398
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 52, 33

Conread position: 2-712
Cow position: chr8:46816681-46817391 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 33

Conread position: 2-777
Cow position: chr8:48406994-48406210 (view UCSC Genome Browser custom track)
Alignm length: 793
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 37

Conread position: 2-917
Cow position: chr8:46816429-46817344 (view UCSC Genome Browser custom track)
Alignm length: 921
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 33

Conread position: 3-798
Cow position: chr8:48407077-48406282 (view UCSC Genome Browser custom track)
Alignm length: 801
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 37

Conread position: 6-1011
Cow position: chr8:48407578-48406573 (view UCSC Genome Browser custom track)
Alignm length: 1010
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 29

Conread position: 8-657
Cow position: chr8:55581044-55581693 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 27

Conread position: 15-1038
Cow position: chr8:46816109-46817129 (view UCSC Genome Browser custom track)
Alignm length: 1030
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 28-779
Cow position: chr8:45201346-45202088 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 10

Conread position: 28-1038
Cow position: chr8:48407302-48406294 (view UCSC Genome Browser custom track)
Alignm length: 1018
Alignm identity: 638
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 10

Conread position: 48-999
Cow position: chr8:46816391-46817342 (view UCSC Genome Browser custom track)
Alignm length: 957
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 390

Conread position: 55-921
Cow position: chr8:45201035-45201901 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 123

Conread position: 57-742
Cow position: chr8:45201289-45201974 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 57-793
Cow position: chr8:45201205-45201941 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 34

Conread position: 64-863
Cow position: chr8:45201128-45201927 (view UCSC Genome Browser custom track)
Alignm length: 801
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 347

Conread position: 69-966
Cow position: chr8:48407179-48406282 (view UCSC Genome Browser custom track)
Alignm length: 899
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 418, 466

Conread position: 90-1038
Cow position: chr8:48407323-48406378 (view UCSC Genome Browser custom track)
Alignm length: 953
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 11

Conread position: 103-735
Cow position: chr8:55581055-55581687 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 103-1031
Cow position: chr8:45200999-45201927 (view UCSC Genome Browser custom track)
Alignm length: 931
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 152

Conread position: 104-1038
Cow position: chr8:46815940-46816877 (view UCSC Genome Browser custom track)
Alignm length: 942
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 139

Conread position: 104-1038
Cow position: chr8:46816363-46817297 (view UCSC Genome Browser custom track)
Alignm length: 942
Alignm identity: 603
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 25

Conread position: 105-779
Cow position: chr8:46816700-46817374 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 81

Conread position: 123-1038
Cow position: chr8:55580738-55581654 (view UCSC Genome Browser custom track)
Alignm length: 923
Alignm identity: 603
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 39

Conread position: 125-972
Cow position: chr8:48407627-48406780 (view UCSC Genome Browser custom track)
Alignm length: 849
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 711, 717

Conread position: 137-871
Cow position: chr8:55581005-55581739 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 367

Conread position: 137-999
Cow position: chr8:46816312-46817174 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 277

Conread position: 137-1000
Cow position: chr8:46816060-46816923 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 215

Conread position: 137-1039
Cow position: chr8:45200949-45201851 (view UCSC Genome Browser custom track)
Alignm length: 906
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 119

Conread position: 146-1000
Cow position: chr8:55580846-55581700 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 363

Conread position: 203-1056
Cow position: chr8:48407633-48406781 (view UCSC Genome Browser custom track)
Alignm length: 857
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 52

Conread position: 311-736
Cow position: chr8:6958059-6957635 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 257
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 26

Conread position: 344-1050
Cow position: chr8:46815601-46816300 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 425
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 345, 171

Conread position: 376-1039
Cow position: chr8:45200936-45201599 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 78

Conread position: 395-798
Cow position: chr8:6958059-6957657 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 248
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 272, 0

Conread position: 456-1039
Cow position: chr8:55580737-55581319 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 24

Conread position: 468-826
Cow position: chr8:6958069-6957713 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 237
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 7, 0

Conread position: 559-966
Cow position: chr8:6958063-6957657 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 259
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 354, 274

Conread position: 4-462
Cow position: chrX:25310108-25310566 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 280
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 55

Conread position: 38-384
Cow position: chrX:29045009-29044662 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 215
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 127

Conread position: 57-832
Cow position: chrX:25309741-25310516 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 358

Conread position: 59-567
Cow position: chrX:25310079-25310586 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 319
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 116, 102

Conread position: 59-819
Cow position: chrX:25324978-25324220 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 524, 533

Conread position: 64-468
Cow position: chrX:29045066-29044662 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 248
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 100, 108

Conread position: 74-644
Cow position: chrX:29045224-29044654 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 73

Conread position: 88-1038
Cow position: chrX:29045777-29044848 (view UCSC Genome Browser custom track)
Alignm length: 955
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 249

Conread position: 103-987
Cow position: chrX:25325102-25324220 (view UCSC Genome Browser custom track)
Alignm length: 892
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 31

Conread position: 103-999
Cow position: chrX:25325690-25324794 (view UCSC Genome Browser custom track)
Alignm length: 902
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 96

Conread position: 103-1000
Cow position: chrX:25325354-25324457 (view UCSC Genome Browser custom track)
Alignm length: 902
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 250

Conread position: 103-1038
Cow position: chrX:25325186-25324251 (view UCSC Genome Browser custom track)
Alignm length: 940
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 82

Conread position: 103-1039
Cow position: chrX:25325270-25324334 (view UCSC Genome Browser custom track)
Alignm length: 943
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 31

Conread position: 103-1039
Cow position: chrX:25325522-25324586 (view UCSC Genome Browser custom track)
Alignm length: 942
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 230

Conread position: 106-1014
Cow position: chrX:25325435-25324527 (view UCSC Genome Browser custom track)
Alignm length: 916
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 141

Conread position: 132-402
Cow position: chrX:14181212-14180942 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 174
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 251, 243

Conread position: 132-559
Cow position: chrX:13826602-13826175 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 259
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 284, 294

Conread position: 137-664
Cow position: chrX:13826765-13826239 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 518, 0

Conread position: 137-726
Cow position: chrX:25309989-25310578 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 117

Conread position: 137-734
Cow position: chrX:29045245-29044648 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 49

Conread position: 137-788
Cow position: chrX:13826849-13826198 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 41

Conread position: 137-823
Cow position: chrX:14181627-14180941 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 363

Conread position: 137-966
Cow position: chrX:25309737-25310566 (view UCSC Genome Browser custom track)
Alignm length: 834
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 181

Conread position: 137-1038
Cow position: chrX:25325572-25324671 (view UCSC Genome Browser custom track)
Alignm length: 905
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 183

Conread position: 146-843
Cow position: chrX:13826924-13826227 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 148-804
Cow position: chrX:29045318-29044662 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 267

Conread position: 152-485
Cow position: chrX:13826498-13826165 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 212
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 156-749
Cow position: chrX:14181524-14180931 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 14

Conread position: 195-1000
Cow position: chrX:25325766-25324961 (view UCSC Genome Browser custom track)
Alignm length: 811
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 75

Conread position: 196-916
Cow position: chrX:12627345-12628063 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 432
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 55, 71

Conread position: 206-989
Cow position: chrX:13826948-13826165 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 140

Conread position: 209-886
Cow position: chrX:14181639-14180963 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 45

Conread position: 235-1000
Cow position: chrX:25309667-25310432 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 25

Conread position: 278-1038
Cow position: chrX:25325767-25325007 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 75

Conread position: 296-990
Cow position: chrX:14181636-14180942 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 183

Conread position: 305-1011
Cow position: chrX:13826933-13826227 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 122

Conread position: 316-972
Cow position: chrX:29045318-29044662 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 200

Conread position: 353-898
Cow position: chrX:29045197-29044652 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 511, 521

Conread position: 353-1038
Cow position: chrX:25325776-25325091 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 168

Conread position: 373-1031
Cow position: chrX:13826949-13826291 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 141

Conread position: 377-1039
Cow position: chrX:14181639-14180977 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 198

Conread position: 430-1000
Cow position: chrX:29045288-29044718 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 86

Conread position: 460-1038
Cow position: chrX:14181640-14181062 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 40

Conread position: 471-1000
Cow position: chrX:29045331-29044802 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 135

Conread position: 531-917
Cow position: chrX:29045838-29045452 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 51

Conread position: 541-1039
Cow position: chrX:13826949-13826451 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 312
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 208, 199

Conread position: 572-1002
Cow position: chrX:25309668-25310098 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 14

Conread position: 578-1038
Cow position: chrX:25325887-25325427 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 286
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 56, 49

Conread position: 601-990
Cow position: chrX:25325780-25325391 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 616-999
Cow position: chrX:29045837-29045454 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 238
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 648-999
Cow position: chrX:25309660-25310011 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 237
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 15