Cow genome map
| Conread name: | Ss1.1-Thy1-THY010084F12.5 |
| Conread position: | 42-428 |
| Cow position: | chr1:54458382-54458000 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 0 |
| Conread position: | 12-428 |
| Cow position: | chr11:1692764-1692348 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-428 |
| Cow position: | chr11:44643404-44642993 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 89, 168 |
| Conread position: | 16-480 |
| Cow position: | chr12:1637589-1638061 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 413, 0 |
| Conread position: | 17-486 |
| Cow position: | chr12:1670983-1670513 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 438, 0 |
| Conread position: | 17-506 |
| Cow position: | chr12:1660885-1660393 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 0 |
| Conread position: | 17-428 |
| Cow position: | chr14:9969894-9970305 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-145 |
| Cow position: | chr16:17445059-17445192 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 144-299 |
| Cow position: | chr16:17446342-17446497 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 294-428 |
| Cow position: | chr16:17450959-17451093 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-428 |
| Cow position: | chr18:56466834-56466418 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-145 |
| Cow position: | chr19:49797048-49797176 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-428 |
| Cow position: | chr19:51023648-51023235 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 137-314 |
| Cow position: | chr19:49797283-49797461 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 296-428 |
| Cow position: | chr19:49797542-49797674 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 200-428 |
| Cow position: | chr2:39307191-39307413 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 91 |
| Conread position: | 17-428 |
| Cow position: | chr21:14501921-14502328 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 64 |
| Conread position: | 15-488 |
| Cow position: | chr23:25828834-25828367 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 415, 0 |
| Conread position: | 17-426 |
| Cow position: | chr23:24195250-24194841 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-506 |
| Cow position: | chr23:25811845-25812338 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 408, 477 |
| Conread position: | 17-513 |
| Cow position: | chr23:25802332-25801843 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 0 |
| Conread position: | 1-643 |
| Cow position: | chr3:17643892-17644538 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 580, 431 |
| Conread position: | 11-480 |
| Cow position: | chr3:62481925-62482390 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 418, 0 |
| Conread position: | 16-428 |
| Cow position: | chr3:17626401-17626813 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-480 |
| Cow position: | chr3:17612616-17612145 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 429, 0 |
| Conread position: | 16-506 |
| Cow position: | chr3:62433159-62433659 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 413, 0 |
| Conread position: | 17-499 |
| Cow position: | chr3:62443792-62444286 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 0 |
| Conread position: | 12-428 |
| Cow position: | chr4:10385000-10384584 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-428 |
| Cow position: | chr5:33725785-33725368 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 37 |
| Conread position: | 12-428 |
| Cow position: | chr7:15736541-15736957 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-503 |
| Cow position: | chr7:968801-968309 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 470 |
| Conread position: | 15-303 |
| Cow position: | chr8:22900798-22901086 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |