Cow genome map

Conread name: Ss1.1-Thy1-THY010201G04.5

Conread position: 278-641
Cow position: chr1:51742012-51741636 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 370

Conread position: 588-868
Cow position: chr1:80663568-80663288 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 39

Conread position: 920-1155
Cow position: chr1:51739990-51739742 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 65, 221

Conread position: 233-536
Cow position: chr10:58661572-58661265 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 210
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 23

Conread position: 190-499
Cow position: chr11:81552922-81553215 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 203
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 184, 30

Conread position: 199-1162
Cow position: chr11:39481824-39480860 (view UCSC Genome Browser custom track)
Alignm length: 979
Alignm identity: 753
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 29

Conread position: 246-634
Cow position: chr11:49064385-49063973 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 273
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 91

Conread position: 304-666
Cow position: chr13:9330302-9329942 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 125, 40

Conread position: 278-635
Cow position: chr14:29702417-29702068 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 239
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 18

Conread position: 300-701
Cow position: chr14:30128970-30128558 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 290
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 136, 8

Conread position: 198-886
Cow position: chr15:28481251-28481913 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 42

Conread position: 927-1155
Cow position: chr15:5143875-5143638 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 105

Conread position: 301-885
Cow position: chr16:10619327-10619900 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 383
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 7, 57

Conread position: 14-272
Cow position: chr17:16418091-16418363 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 20

Conread position: 265-781
Cow position: chr17:18325840-18326346 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 82

Conread position: 399-842
Cow position: chr17:16419686-16420127 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 295
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 8, 185

Conread position: 531-861
Cow position: chr17:24335882-24335561 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 216
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 138, 21

Conread position: 190-436
Cow position: chr18:51237200-51236957 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 217, 30

Conread position: 242-860
Cow position: chr2:2090257-2090889 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 265-873
Cow position: chr2:1830884-1831496 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 415
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 14, 19

Conread position: 271-615
Cow position: chr2:66310082-66310420 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 241
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 197, 22

Conread position: 1027-1158
Cow position: chr2:39749369-39749505 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 307-623
Cow position: chr20:28155966-28155647 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 101, 175

Conread position: 440-702
Cow position: chr21:21134636-21134891 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 54

Conread position: 266-487
Cow position: chr22:40369100-40368878 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 33

Conread position: 309-805
Cow position: chr22:9276080-9275573 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 329
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 273

Conread position: 263-610
Cow position: chr24:37201185-37201540 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 16, 32

Conread position: 287-885
Cow position: chr24:37322021-37322597 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 390
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 75

Conread position: 262-515
Cow position: chr25:14484400-14484663 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 93

Conread position: 308-638
Cow position: chr25:30163621-30163957 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 231
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 88, 269

Conread position: 127-632
Cow position: chr26:1409977-1409475 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 328
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 49

Conread position: 236-464
Cow position: chr28:581015-581248 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 12

Conread position: 278-544
Cow position: chr28:28472844-28472571 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 14, 102

Conread position: 248-879
Cow position: chr29:32220252-32219624 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 16

Conread position: 266-770
Cow position: chr29:21457351-21456853 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 5

Conread position: 409-659
Cow position: chr4:13266652-13266899 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 60

Conread position: 409-871
Cow position: chr4:12459400-12459858 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 298
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 60

Conread position: 252-610
Cow position: chr5:55097366-55097732 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 256
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 108, 17

Conread position: 299-793
Cow position: chr5:52999102-52998625 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 323
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 92

Conread position: 391-910
Cow position: chr5:68491095-68491608 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 339
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 20, 170

Conread position: 289-919
Cow position: chr6:52115715-52115115 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 42

Conread position: 291-840
Cow position: chr6:46565152-46565686 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 92

Conread position: 384-950
Cow position: chr6:34077999-34077434 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 382
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 23, 206

Conread position: 182-743
Cow position: chr7:18708968-18708415 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 70

Conread position: 263-883
Cow position: chr7:21854933-21855547 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 147

Conread position: 319-635
Cow position: chr7:50964882-50964569 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 216
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 15, 69

Conread position: 416-805
Cow position: chr8:46149320-46149711 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 254
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 214

Conread position: 190-650
Cow position: chr9:7013758-7013303 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 287
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 103, 16

Conread position: 155-935
Cow position: chrX:354461-355219 (view UCSC Genome Browser custom track)
Alignm length: 794
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 12

Conread position: 190-445
Cow position: chrX:27467162-27467415 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 7

Conread position: 250-529
Cow position: chrX:33704577-33704292 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 16

Conread position: 256-508
Cow position: chrX:15252629-15252895 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 10

Conread position: 304-872
Cow position: chrX:3001332-3000764 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 78

Conread position: 375-745
Cow position: chrX:44029892-44029522 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 257
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 34, 44

Conread position: 541-801
Cow position: chrX:1784783-1784531 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 127, 84

Conread position: 715-926
Cow position: chrX:31069689-31069478 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 145
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 186, 161

Conread position: 913-1146
Cow position: chrX:1784340-1784095 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 109, 10

Conread position: 921-1151
Cow position: chrX:13013686-13013917 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 170, 67