Cow genome map
Conread name: | Ss1.1-Thy1-THY010201G04.5 |
Conread position: | 278-641 |
Cow position: | chr1:51742012-51741636 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 370 |
Conread position: | 588-868 |
Cow position: | chr1:80663568-80663288 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 195 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 33, 39 |
Conread position: | 920-1155 |
Cow position: | chr1:51739990-51739742 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 180 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 65, 221 |
Conread position: | 233-536 |
Cow position: | chr10:58661572-58661265 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 210 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 75, 23 |
Conread position: | 190-499 |
Cow position: | chr11:81552922-81553215 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 203 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 184, 30 |
Conread position: | 199-1162 |
Cow position: | chr11:39481824-39480860 (view UCSC Genome Browser custom track) |
Alignm length: | 979 |
Alignm identity: | 753 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 29 |
Conread position: | 246-634 |
Cow position: | chr11:49064385-49063973 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 273 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 21, 91 |
Conread position: | 304-666 |
Cow position: | chr13:9330302-9329942 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 254 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 125, 40 |
Conread position: | 278-635 |
Cow position: | chr14:29702417-29702068 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 239 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 61, 18 |
Conread position: | 300-701 |
Cow position: | chr14:30128970-30128558 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 290 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 136, 8 |
Conread position: | 198-886 |
Cow position: | chr15:28481251-28481913 (view UCSC Genome Browser custom track) |
Alignm length: | 696 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 42 |
Conread position: | 927-1155 |
Cow position: | chr15:5143875-5143638 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 171 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 63, 105 |
Conread position: | 301-885 |
Cow position: | chr16:10619327-10619900 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 383 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 7, 57 |
Conread position: | 14-272 |
Cow position: | chr17:16418091-16418363 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 189 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 44, 20 |
Conread position: | 265-781 |
Cow position: | chr17:18325840-18326346 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 82 |
Conread position: | 399-842 |
Cow position: | chr17:16419686-16420127 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 295 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 8, 185 |
Conread position: | 531-861 |
Cow position: | chr17:24335882-24335561 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 216 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 138, 21 |
Conread position: | 190-436 |
Cow position: | chr18:51237200-51236957 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 165 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 217, 30 |
Conread position: | 242-860 |
Cow position: | chr2:2090257-2090889 (view UCSC Genome Browser custom track) |
Alignm length: | 638 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 19 |
Conread position: | 265-873 |
Cow position: | chr2:1830884-1831496 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 415 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 14, 19 |
Conread position: | 271-615 |
Cow position: | chr2:66310082-66310420 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 241 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 197, 22 |
Conread position: | 1027-1158 |
Cow position: | chr2:39749369-39749505 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 307-623 |
Cow position: | chr20:28155966-28155647 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 220 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 101, 175 |
Conread position: | 440-702 |
Cow position: | chr21:21134636-21134891 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 185 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 13, 54 |
Conread position: | 266-487 |
Cow position: | chr22:40369100-40368878 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 160 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 13, 33 |
Conread position: | 309-805 |
Cow position: | chr22:9276080-9275573 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 329 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 98, 273 |
Conread position: | 263-610 |
Cow position: | chr24:37201185-37201540 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 238 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 16, 32 |
Conread position: | 287-885 |
Cow position: | chr24:37322021-37322597 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 390 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 9, 75 |
Conread position: | 262-515 |
Cow position: | chr25:14484400-14484663 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 182 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 17, 93 |
Conread position: | 308-638 |
Cow position: | chr25:30163621-30163957 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 231 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 88, 269 |
Conread position: | 127-632 |
Cow position: | chr26:1409977-1409475 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 328 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 39, 49 |
Conread position: | 236-464 |
Cow position: | chr28:581015-581248 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 162 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 47, 12 |
Conread position: | 278-544 |
Cow position: | chr28:28472844-28472571 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 189 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 14, 102 |
Conread position: | 248-879 |
Cow position: | chr29:32220252-32219624 (view UCSC Genome Browser custom track) |
Alignm length: | 653 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 16 |
Conread position: | 266-770 |
Cow position: | chr29:21457351-21456853 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 5 |
Conread position: | 409-659 |
Cow position: | chr4:13266652-13266899 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 172 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 33, 60 |
Conread position: | 409-871 |
Cow position: | chr4:12459400-12459858 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 298 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 33, 60 |
Conread position: | 252-610 |
Cow position: | chr5:55097366-55097732 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 256 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 108, 17 |
Conread position: | 299-793 |
Cow position: | chr5:52999102-52998625 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 323 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 17, 92 |
Conread position: | 391-910 |
Cow position: | chr5:68491095-68491608 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 339 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 20, 170 |
Conread position: | 289-919 |
Cow position: | chr6:52115715-52115115 (view UCSC Genome Browser custom track) |
Alignm length: | 638 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 42 |
Conread position: | 291-840 |
Cow position: | chr6:46565152-46565686 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 92 |
Conread position: | 384-950 |
Cow position: | chr6:34077999-34077434 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 382 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 23, 206 |
Conread position: | 182-743 |
Cow position: | chr7:18708968-18708415 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 70 |
Conread position: | 263-883 |
Cow position: | chr7:21854933-21855547 (view UCSC Genome Browser custom track) |
Alignm length: | 637 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 147 |
Conread position: | 319-635 |
Cow position: | chr7:50964882-50964569 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 216 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 15, 69 |
Conread position: | 416-805 |
Cow position: | chr8:46149320-46149711 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 254 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 33, 214 |
Conread position: | 190-650 |
Cow position: | chr9:7013758-7013303 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 287 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 103, 16 |
Conread position: | 155-935 |
Cow position: | chrX:354461-355219 (view UCSC Genome Browser custom track) |
Alignm length: | 794 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 12 |
Conread position: | 190-445 |
Cow position: | chrX:27467162-27467415 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 173 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 57, 7 |
Conread position: | 250-529 |
Cow position: | chrX:33704577-33704292 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 195 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 38, 16 |
Conread position: | 256-508 |
Cow position: | chrX:15252629-15252895 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 181 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 24, 10 |
Conread position: | 304-872 |
Cow position: | chrX:3001332-3000764 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 78 |
Conread position: | 375-745 |
Cow position: | chrX:44029892-44029522 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 257 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 34, 44 |
Conread position: | 541-801 |
Cow position: | chrX:1784783-1784531 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 183 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 127, 84 |
Conread position: | 715-926 |
Cow position: | chrX:31069689-31069478 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 145 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 186, 161 |
Conread position: | 913-1146 |
Cow position: | chrX:1784340-1784095 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 177 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 109, 10 |
Conread position: | 921-1151 |
Cow position: | chrX:13013686-13013917 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 166 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 170, 67 |