Cow genome map
Conread name: | Ss1.1-Thy1-THY010205B09.5 |
Conread position: | 20-426 |
Cow position: | chr1:69374770-69374382 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 120-426 |
Cow position: | chr1:30516494-30516800 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 142-431 |
Cow position: | chr1:6621091-6621380 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 159 |
Conread position: | 8-426 |
Cow position: | chr10:69640102-69639687 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 42 |
Conread position: | 23-426 |
Cow position: | chr10:15825846-15825443 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 26 |
Conread position: | 23-426 |
Cow position: | chr10:45269906-45270306 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 26 |
Conread position: | 20-426 |
Cow position: | chr11:7724215-7724621 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 51-426 |
Cow position: | chr11:43057929-43058304 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 63-426 |
Cow position: | chr11:68582200-68581837 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 142-431 |
Cow position: | chr11:82946836-82947125 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 159 |
Conread position: | 315-426 |
Cow position: | chr11:16255176-16255287 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 102 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 20-426 |
Cow position: | chr12:30861750-30861344 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 48-426 |
Cow position: | chr12:1662196-1662574 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 48-426 |
Cow position: | chr12:1673621-1673999 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 72-426 |
Cow position: | chr12:1636192-1635810 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 267 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 23-335 |
Cow position: | chr13:27850691-27850378 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 26 |
Conread position: | 48-426 |
Cow position: | chr13:7598936-7599308 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 48-426 |
Cow position: | chr13:52263849-52263471 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 326-426 |
Cow position: | chr13:42559945-42560045 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 92 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 307-428 |
Cow position: | chr14:7028314-7028191 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 96 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 20-426 |
Cow position: | chr15:35507110-35506718 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 48-426 |
Cow position: | chr15:11070395-11070017 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 63-426 |
Cow position: | chr15:14106155-14106518 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 195-429 |
Cow position: | chr15:46718116-46717882 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 15-426 |
Cow position: | chr16:49012058-49011647 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 34 |
Conread position: | 20-426 |
Cow position: | chr16:49773452-49773858 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 20-426 |
Cow position: | chr16:52573310-52573715 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 20-426 |
Cow position: | chr17:36084450-36084044 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 1-426 |
Cow position: | chr18:46143329-46143753 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 50 |
Conread position: | 20-426 |
Cow position: | chr19:6987725-6987323 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 20-426 |
Cow position: | chr19:29154097-29154503 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 20-426 |
Cow position: | chr19:41835209-41834806 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 20-426 |
Cow position: | chr2:58003360-58002957 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 219-426 |
Cow position: | chr2:9225249-9225456 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 20-426 |
Cow position: | chr20:28491493-28491898 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 159-404 |
Cow position: | chr20:5115426-5115671 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 158 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 226-426 |
Cow position: | chr20:37397972-37397772 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 20-426 |
Cow position: | chr22:41852857-41852452 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 30 |
Conread position: | 255-426 |
Cow position: | chr22:41962300-41962475 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 150 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 25-435 |
Cow position: | chr23:24170520-24170929 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 45-439 |
Cow position: | chr23:25804038-25804430 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 386, 0 |
Conread position: | 48-426 |
Cow position: | chr23:24185732-24186110 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 48-435 |
Cow position: | chr23:24223257-24223644 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 78-430 |
Cow position: | chr23:26337828-26338179 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 81-426 |
Cow position: | chr23:26341282-26340937 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 237-426 |
Cow position: | chr23:35659464-35659653 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 261-426 |
Cow position: | chr23:5740794-5740629 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 148 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 85-426 |
Cow position: | chr24:40172648-40172989 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 334-426 |
Cow position: | chr26:29165765-29165857 (view UCSC Genome Browser custom track) |
Alignm length: | 93 |
Alignm identity: | 83 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 71-426 |
Cow position: | chr27:26613730-26614085 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 201-426 |
Cow position: | chr27:27865541-27865766 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 286-426 |
Cow position: | chr28:27049905-27050045 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 125 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 20-426 |
Cow position: | chr29:1838818-1839224 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 3-424 |
Cow position: | chr3:1077409-1077830 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 47 |
Conread position: | 7-448 |
Cow position: | chr3:62459309-62458868 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 29 |
Conread position: | 45-426 |
Cow position: | chr3:62478433-62478052 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 45-429 |
Cow position: | chr3:17591902-17592286 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 47-429 |
Cow position: | chr3:17614441-17614823 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 47-429 |
Cow position: | chr3:17624755-17624373 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 48-429 |
Cow position: | chr3:17645420-17645801 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 48-432 |
Cow position: | chr3:62448578-62448962 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 48-441 |
Cow position: | chr3:62431042-62430649 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 296-426 |
Cow position: | chr3:56588624-56588752 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 115 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 459-823 |
Cow position: | chr3:62456022-62455648 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 20-426 |
Cow position: | chr4:15926025-15925619 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 189-431 |
Cow position: | chr4:64390607-64390849 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 273-426 |
Cow position: | chr4:35724460-35724307 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 135 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 20-426 |
Cow position: | chr5:13917403-13916997 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 54-426 |
Cow position: | chr5:31548158-31548530 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 321-426 |
Cow position: | chr5:8026503-8026398 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 95 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 349-426 |
Cow position: | chr5:45989719-45989642 (view UCSC Genome Browser custom track) |
Alignm length: | 78 |
Alignm identity: | 72 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 20-426 |
Cow position: | chr6:7483608-7484013 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 20-426 |
Cow position: | chr6:56962142-56962549 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 45-426 |
Cow position: | chr6:39764562-39764181 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 48-426 |
Cow position: | chr6:39755834-39755456 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 76-426 |
Cow position: | chr6:20715440-20715790 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 201-346 |
Cow position: | chr6:37164862-37165007 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 131 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 20-426 |
Cow position: | chr7:13894804-13894398 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 29 |
Conread position: | 42-284 |
Cow position: | chr7:2968612-2968375 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 166 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 145, 14 |
Conread position: | 48-429 |
Cow position: | chr7:2957920-2958301 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 189-426 |
Cow position: | chr8:11335272-11335035 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 255-426 |
Cow position: | chr8:36912090-36911919 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 147 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 93-426 |
Cow position: | chr9:36521591-36521258 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 185-426 |
Cow position: | chr9:35746073-35746314 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 18-426 |
Cow position: | chrX:6377811-6378219 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 31 |
Conread position: | 154-426 |
Cow position: | chrX:22916340-22916068 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 155-425 |
Cow position: | chrX:15369346-15369613 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 177 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 202, 0 |
Conread position: | 176-396 |
Cow position: | chrX:16572722-16572502 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 153 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 0, 0 |