Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01B110086.5 |
| Conread position: | 478-667 |
| Cow position: | chr13:46206182-46206370 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 492-749 |
| Cow position: | chr15:19143620-19143362 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 489-719 |
| Cow position: | chr18:56413602-56413832 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 16 |
| Conread position: | 490-663 |
| Cow position: | chr18:56272296-56272123 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 493-703 |
| Cow position: | chr18:55576902-55576692 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 499-719 |
| Cow position: | chr18:56398589-56398369 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 477-737 |
| Cow position: | chr19:14951300-14951040 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 490-734 |
| Cow position: | chr19:23640000-23640243 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 234, 0 |
| Conread position: | 486-686 |
| Cow position: | chr2:84896573-84896373 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 486-686 |
| Cow position: | chr2:86507726-86507526 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 486-741 |
| Cow position: | chr21:34231117-34230862 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 478-745 |
| Cow position: | chr22:12537797-12538066 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 263, 0 |
| Conread position: | 481-719 |
| Cow position: | chr22:12485096-12484858 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 486-739 |
| Cow position: | chr22:12443176-12442923 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-248 |
| Cow position: | chr23:24539917-24539682 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 247-758 |
| Cow position: | chr23:24538932-24538421 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 433, 427 |
| Conread position: | 381-758 |
| Cow position: | chr23:25658138-25658509 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 45 |
| Conread position: | 383-762 |
| Cow position: | chr23:24622815-24623191 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 32 |
| Conread position: | 406-730 |
| Cow position: | chr23:25730780-25730456 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 54 |
| Conread position: | 406-739 |
| Cow position: | chr23:24568165-24567832 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 414-758 |
| Cow position: | chr23:24630136-24630475 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 414-758 |
| Cow position: | chr23:25691650-25691306 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 33 |
| Conread position: | 430-741 |
| Cow position: | chr23:24637067-24637370 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 37, 47 |
| Conread position: | 478-757 |
| Cow position: | chr23:25703123-25702844 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 480-758 |
| Cow position: | chr23:24648181-24648459 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 480-758 |
| Cow position: | chr23:25617607-25617885 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 255 |
| Conread position: | 499-728 |
| Cow position: | chr23:24527358-24527131 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 82 |
| Conread position: | 755-852 |
| Cow position: | chr23:24538136-24538039 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 916-1116 |
| Cow position: | chr23:24538271-24538075 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 377-758 |
| Cow position: | chr24:17062817-17063192 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 368, 48 |
| Conread position: | 411-758 |
| Cow position: | chr24:17081903-17081556 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 65 |
| Conread position: | 471-752 |
| Cow position: | chr24:17010404-17010685 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 540-737 |
| Cow position: | chr24:16984942-16985132 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 327-729 |
| Cow position: | chr25:33122143-33122545 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 45 |
| Conread position: | 384-720 |
| Cow position: | chr25:3639958-3639625 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 329, 86 |
| Conread position: | 418-730 |
| Cow position: | chr25:3673335-3673645 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 6, 51 |
| Conread position: | 421-758 |
| Cow position: | chr25:321797-322131 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 47 |
| Conread position: | 476-723 |
| Cow position: | chr25:421940-422187 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 205, 193 |
| Conread position: | 480-741 |
| Cow position: | chr25:33142815-33143075 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 0 |
| Conread position: | 481-729 |
| Cow position: | chr25:4663665-4663417 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 486-758 |
| Cow position: | chr25:22223933-22224205 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 250, 264 |
| Conread position: | 487-719 |
| Cow position: | chr25:34467692-34467924 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 204, 162 |
| Conread position: | 492-655 |
| Cow position: | chr25:361401-361564 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 492-750 |
| Cow position: | chr25:339501-339760 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 255, 0 |
| Conread position: | 493-758 |
| Cow position: | chr25:34745087-34744822 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 499-706 |
| Cow position: | chr25:34751286-34751493 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 416-744 |
| Cow position: | chr7:27245147-27244823 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 320, 21 |
| Conread position: | 487-746 |
| Cow position: | chr8:55569522-55569781 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |