Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01C070036.5.5 |
| Conread position: | 254-367 |
| Cow position: | chr11:85447272-85447159 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-480 |
| Cow position: | chr11:85447090-85446969 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 475-1528 |
| Cow position: | chr11:85446444-85445391 (view UCSC Genome Browser custom track) |
| Alignm length: | 1054 |
| Alignm identity: | 915 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1179-1376 |
| Cow position: | chr11:79469026-79468829 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 379-2159 |
| Cow position: | chr12:27341187-27339383 (view UCSC Genome Browser custom track) |
| Alignm length: | 1813 |
| Alignm identity: | 1574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1163, 19 |
| Conread position: | 2251-2502 |
| Cow position: | chr12:27339239-27338981 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 120 |
| Conread position: | 475-1526 |
| Cow position: | chr13:37744727-37743673 (view UCSC Genome Browser custom track) |
| Alignm length: | 1056 |
| Alignm identity: | 829 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 666, 671 |
| Conread position: | 1147-1484 |
| Cow position: | chr14:42472178-42471853 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 197, 49 |
| Conread position: | 573-1248 |
| Cow position: | chr17:45721918-45722595 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 402 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 9, 90 |
| Conread position: | 475-1545 |
| Cow position: | chr18:15605534-15606605 (view UCSC Genome Browser custom track) |
| Alignm length: | 1072 |
| Alignm identity: | 909 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1064, 0 |
| Conread position: | 586-1237 |
| Cow position: | chr2:65210887-65211538 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 394 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 70, 75 |
| Conread position: | 1-255 |
| Cow position: | chr23:20804673-20804420 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 245-367 |
| Cow position: | chr23:31823416-31823294 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 245-367 |
| Cow position: | chr23:31836280-31836158 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-366 |
| Cow position: | chr23:31858834-31858722 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-367 |
| Cow position: | chr23:20803043-20802930 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 112 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 335-481 |
| Cow position: | chr23:31858483-31858337 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 340-486 |
| Cow position: | chr23:31835848-31835702 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-486 |
| Cow position: | chr23:31822966-31822839 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 363-486 |
| Cow position: | chr23:20802677-20802554 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 117 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 475-1534 |
| Cow position: | chr23:31822146-31821083 (view UCSC Genome Browser custom track) |
| Alignm length: | 1064 |
| Alignm identity: | 912 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 0 |
| Conread position: | 475-1534 |
| Cow position: | chr23:31858004-31856942 (view UCSC Genome Browser custom track) |
| Alignm length: | 1063 |
| Alignm identity: | 915 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1034, 0 |
| Conread position: | 475-2485 |
| Cow position: | chr23:20802284-20800203 (view UCSC Genome Browser custom track) |
| Alignm length: | 2095 |
| Alignm identity: | 1775 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1071, 1181 |
| Conread position: | 475-1528 |
| Cow position: | chr24:29219732-29218679 (view UCSC Genome Browser custom track) |
| Alignm length: | 1054 |
| Alignm identity: | 903 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-831 |
| Cow position: | chr5:17899702-17899237 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 275 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 97, 105 |
| Conread position: | 715-1237 |
| Cow position: | chr5:22164490-22163968 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 325 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 715-1237 |
| Cow position: | chr5:22342770-22343292 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 326 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 715-1237 |
| Cow position: | chr5:24452740-24453262 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 326 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 731-1237 |
| Cow position: | chr5:67433918-67433412 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 309 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 59, 73 |
| Conread position: | 254-366 |
| Cow position: | chr7:13892053-13892165 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 362-482 |
| Cow position: | chr7:13892270-13892390 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 475-1553 |
| Cow position: | chr7:13895711-13896787 (view UCSC Genome Browser custom track) |
| Alignm length: | 1081 |
| Alignm identity: | 941 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1054, 1027 |