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Cow genome map

           
Conread name:
           
Ss1.1-Tra1-TCH01E120018.5
        

               
Conread position:
               
1-217
               

               
Cow position:
               
chr10:13425861-13426077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 62
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr10:1434420-1434204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr10:1720574-1720796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr10:6002311-6002534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr10:13871396-13871176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 59
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr10:57743501-57743278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr10:60703736-60703958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
2-214
               

               
Cow position:
               
chr10:39650178-39650391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr10:8459512-8459292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
43, 56
               

               
Conread position:
               
10-205
               

               
Cow position:
               
chr10:3783712-3783520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
10-223
               

               
Cow position:
               
chr10:16955071-16954861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 51
               

               
Conread position:
               
24-221
               

               
Cow position:
               
chr10:31739253-31739060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr11:45853034-45853215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr11:65756760-65756940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr11:55216266-55216055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr11:8820141-8819916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr11:51224561-51224357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr11:12178910-12178683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 61
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr11:53429093-53429313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr11:60757046-60757265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 120
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr11:72313377-72313152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
10-163
               

               
Cow position:
               
chr11:24539741-24539589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
10-213
               

               
Cow position:
               
chr11:1285201-1285405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr11:41167773-41167985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
11-205
               

               
Cow position:
               
chr11:47158864-47159059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr12:8728325-8728125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 167
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr12:4010961-4010738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 186
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr12:42232523-42232302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
50, 62
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr12:25939071-25939302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
9, 140
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr12:7077287-7077528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:11169148-11169360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:57159033-57158814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr13:54368717-54368493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr13:34345309-34345079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr13:13902860-13902641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr13:15921453-15921673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
10-220
               

               
Cow position:
               
chr13:43974955-43975165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr13:2805286-2805498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr13:38612220-38612008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr14:40984512-40984711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:1735647-1735869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 52
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr14:18107420-18107202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr14:32584151-32584371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr14:36710195-36710405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
43, 53
               

               
Conread position:
               
27-217
               

               
Cow position:
               
chr14:42596043-42596232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
89-235
               

               
Cow position:
               
chr14:24707558-24707704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
139, 9
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr15:7058606-7058393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr15:20155302-20155522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 191
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr15:4925037-4924816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 62
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr15:19734920-19735141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr15:35643572-35643794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 60
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr15:50344851-50345064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 165
               

               
Conread position:
               
7-247
               

               
Cow position:
               
chr15:20458199-20457960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr15:13981184-13980975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 51
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr15:27747650-27747862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
10-231
               

               
Cow position:
               
chr15:24796735-24796519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr16:28468593-28468811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr16:53612333-53612117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr16:25444406-25444188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 60
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr16:27730851-27731071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr16:26666234-26666009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 57
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr16:46102087-46102315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 57
               

               
Conread position:
               
8-218
               

               
Cow position:
               
chr16:3592714-3592922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 53
               

               
Conread position:
               
8-221
               

               
Cow position:
               
chr16:11309872-11309660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
9-222
               

               
Cow position:
               
chr16:37058487-37058699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr17:15481465-15481251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr17:597737-597956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 138
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr17:11775150-11775373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr17:38759430-38759654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
2-163
               

               
Cow position:
               
chr17:4608378-4608216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr17:6262946-6262718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr17:41243209-41243015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
143, 56
               

               
Conread position:
               
10-153
               

               
Cow position:
               
chr17:37460457-37460313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 95
               

               
Conread position:
               
10-231
               

               
Cow position:
               
chr17:29950297-29950076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr18:14791125-14791343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr18:36455982-36455759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr18:37541029-37540807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr18:51300576-51300351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 215
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr18:51331160-51330938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
10, 174
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr18:33347405-33347178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 59
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr18:41260465-41260266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
48, 57
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr18:15494080-15494285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr18:48529422-48529207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
16, 12
               

               
Conread position:
               
15-223
               

               
Cow position:
               
chr18:30846747-30846956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 125
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr19:36150206-36150043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr19:33944888-33944667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr19:45149551-45149773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
3-193
               

               
Cow position:
               
chr19:48025971-48026164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 57
               

               
Conread position:
               
7-213
               

               
Cow position:
               
chr19:4781394-4781191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
10-223
               

               
Cow position:
               
chr19:36998917-36999124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 134
               

               
Conread position:
               
18-223
               

               
Cow position:
               
chr19:15871331-15871540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 199
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr2:64577561-64577764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr2:432080-432300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr2:73780055-73780280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 215
               

               
Conread position:
               
2-163
               

               
Cow position:
               
chr2:77067312-77067149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
2-193
               

               
Cow position:
               
chr2:81208815-81209008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 174
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr2:47612453-47612673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr2:25768765-25768541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr2:77942103-77942303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 64
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr20:924234-924444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 57
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr20:35127951-35127732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
19-235
               

               
Cow position:
               
chr20:5351796-5352007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr21:30565148-30564926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr21:21623672-21623450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr21:32894827-32895049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr21:12099926-12099705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 205
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr21:149539-149320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr21:30595698-30595918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr21:33316974-33317194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr21:13189327-13189105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 66
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr21:1195930-1195704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr21:47648732-47648503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
6-213
               

               
Cow position:
               
chr21:24223409-24223203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
82, 40
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr22:27485564-27485341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
9, 61
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr22:7231148-7230926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr22:11994488-11994708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr22:18603592-18603817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
4-222
               

               
Cow position:
               
chr22:33586970-33586757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
4-223
               

               
Cow position:
               
chr22:27315592-27315810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 160
               

               
Conread position:
               
6-213
               

               
Cow position:
               
chr22:46587211-46587003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 57
               

               
Conread position:
               
7-167
               

               
Cow position:
               
chr22:32393032-32393194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 56
               

               
Conread position:
               
8-240
               

               
Cow position:
               
chr22:13290071-13289839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr23:9542622-9542798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr23:14116711-14116902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 62
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr23:22144096-22144308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr23:9608111-9607894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 61
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr23:27146079-27146300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr23:1048661-1048881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr24:33008421-33008646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr24:36726462-36726240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr24:37222513-37222729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr24:27587083-27586862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 92
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr25:30705632-30705794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr25:30311723-30311927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
52, 62
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr25:30128817-30129031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr25:25731542-25731324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr25:25239103-25239324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr25:12939205-12939425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr25:26282027-26281807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr25:24303271-24303482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr26:21415304-21415525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr26:9558622-9558843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr26:17429217-17429446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr26:35423757-35423527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr26:14897259-14897023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
10-219
               

               
Cow position:
               
chr26:5699523-5699310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 173
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr26:15550898-15551111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 55
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr27:1845663-1845884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 80
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr27:20810634-20810413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr27:15272855-15273082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr28:23916338-23916135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 134
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr28:32198671-32198455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr28:6262608-6262390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 154
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr28:29036393-29036613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
8-222
               

               
Cow position:
               
chr28:22553777-22553564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr29:5339858-5340080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 59
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr29:20614719-20614496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
1-813
               

               
Cow position:
               
chr29:3548984-3548177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
827
               

               
Alignm identity:
               
640
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr29:34121276-34121495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr29:2463642-2463861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr29:5240624-5240404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr29:16101888-16102107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr3:57977401-57977616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr3:61954907-61954692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr3:67450996-67450781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr3:76648958-76649181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
8, 215
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr3:13276136-13276358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr3:8563917-8564139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
10, 102
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr3:10038340-10038121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr3:10932013-10931792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr3:21222571-21222796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 62
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr3:41582540-41582315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr3:44504400-44504623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr3:24904825-24904623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr3:37349008-37349221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr3:51068755-51068978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 214
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr3:69930690-69930910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr3:72633217-72632996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr3:75038698-75038918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr3:61554544-61554756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
86, 201
               

               
Conread position:
               
55-223
               

               
Cow position:
               
chr3:64412969-64413142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr4:43236150-43236368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr4:3971339-3971118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 32
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr4:45954636-45954414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 164
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr4:46457009-46456791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr4:12840891-12840686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr4:36026322-36026541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 60
               

               
Conread position:
               
10-231
               

               
Cow position:
               
chr4:37947996-37948215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 53
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr5:48017260-48017052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr5:28331573-28331791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
8, 59
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr5:28571599-28571377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr5:8201394-8201179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr5:26348440-26348661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr5:51069257-51069038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr5:1338870-1339102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr5:46735227-46735447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr5:7396297-7396077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
5-221
               

               
Cow position:
               
chr5:41425733-41425951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 154
               

               
Conread position:
               
39-213
               

               
Cow position:
               
chr5:32954341-32954515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr6:24045485-24045697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
72, 55
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr6:14305814-14305595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr6:20451148-20450928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr6:21976139-21975911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr6:38873473-38873702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr6:39331343-39331572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr7:3324954-3325148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr7:6214725-6214523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 59
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr7:6207870-6207666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr7:48105309-48105100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr7:46460797-46460578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr7:57024783-57024999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr7:38693205-38692986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr7:889115-889336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 63
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr7:23817187-23816966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr7:66908525-66908304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr7:38400130-38399911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr7:1367415-1367635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr7:60727174-60727395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
6, 165
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr7:52167068-52166838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 165
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr7:20779182-20778950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
85, 211
               

               
Conread position:
               
7-222
               

               
Cow position:
               
chr7:38145599-38145810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
27-223
               

               
Cow position:
               
chr7:30716344-30716539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr8:27721319-27721097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 50
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr8:39048858-39049081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr8:11595608-11595406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr8:47658867-47659085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr8:51674611-51674392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr8:5020470-5020250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr8:49602088-49602295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr8:8135907-8136119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 156
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr8:13322731-13322943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr9:11505099-11504876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 59
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr9:30675192-30674973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr9:37158493-37158713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
6, 57
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr9:22319298-22319526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
8, 57
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr9:24918179-24918391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr9:52002002-52002209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chrX:37753451-37753246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chrX:2655738-2655532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chrX:23269160-23269375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chrX:10823068-10823285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 57
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chrX:13654521-13654296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chrX:16858644-16858869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chrX:11904972-11905196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chrX:21781360-21781138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chrX:15377637-15377857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chrX:2479603-2479823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chrX:26755614-26755834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chrX:29288022-29287801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chrX:30286431-30286212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chrX:29029675-29029886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chrX:4905963-4906144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 60
               

               
Conread position:
               
6-220
               

               
Cow position:
               
chrX:39765579-39765369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chrX:33173133-33173351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
44, 87
               

               
Conread position:
               
10-220
               

               
Cow position:
               
chrX:5070554-5070764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 53
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chrX:303134-302924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
81, 139
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chrX:388148-387939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 195
               

               
Conread position:
               
19-223
               

               
Cow position:
               
chrX:16230865-16231070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
9, 49